ClCG04G010350 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCAGCAAGTTCTGCAATCTTTTAGTAAAAGCCCTGTGGAGTTTCGTTTATGCAATGTATCAGGGTAATTGATTATTCTCGTTTTTATTCACTGAAATTTTCTCTTGGAATTGAGTTTTCTTGCATTGGATCCCCTTACCGTTTCTGGGTTTTGATAGTTACACCAATGAATTACTGGAGATTCATTCCGACGATCCATCATTGCATGTATTGTTCATACCTGGAAATCCAGGTGCATCTGCTTTTTGGGGATGTTGGTTTTCGATGCTTCTGTTGATTTTTGTATAATTTCTGAATGTAAATTGTTATGGGCTTTGTTTCCAAGACAGGGATTATTTCATTTTATAAAGATTTTGTTGAATCACTGTATCAGTTGCTTGGAGGCCGTGTGTCTATAACAGGCAAGATATGAGTTGTTGACATTATTCATATCCCTTTCATTTTTTCTTAGAAAGGATTGAATCTTTTATATTTTAGCTGACATTTTTTCTTGTTCTGTTTATCTTCTTTGGCCCTCCTTTTGTCTATTGTCAGCTATTGGACATATATGTCAAACGAAGAAGGTACTTTGTCATGGAACATACGTTTTAGCACTCATTTTCTTCTAAGTGGCAAAGTCTTTTAGAAATGATGTTTCTGTGTACTGAAAATTTTTATATTTGAAACATAAATGGCTCTGTTTAATTAGTGGTTTTGGTTAGTTATGCTTAATTTTCATGTTTGAAAAAGGAAATTAGTAGATGTTGGTCGGACGGGTATAATGAAGTTTCTTTTATAAATTTCCCCGGTGATTTTATGTAATGGATATGATGCTTCCTCTCTTTTAGGACTGGGAAGGTGGAAGGTTATTTTCGTTACAAGAACAAATTGATCATAAGGTAACTAGCTGTTTTCTCTGTCCATTTGATTGAATTGTTGATGGCTTAAGGTGGCAAGTGGTCCATGGAAAATTTAAATTTTGAAGTTCCTTTATAAGCTAGTGGACTTCATTTTTCTTGTCCAAGATAGGTATGGAATTGGAGATGGCATCGCAGAATTTTGAAATTAACATCTCTTGCTCAAGATTACTGTTCATTTCATTATTATTTGTTCCCTGCAGGTCCCTTTCTCTTTCATATTTCAATTGTTGATACCAGAATTCTGTATGGGCTGAACAATATTCATCTTTCTTTTGCAGATTGAATTTGTTAGACAGGAGTTACCAAATAAAGACATCCCGTTACTACTGGTAATGATACCTTTATGATTACAATTGATGCTATGTTTTCACACTAGTCTTAAAAGAGTTGCACAGAGAAAAATTTTAAATTGTATTATCCTGATATTTTCTGAGTAAATGTCAGGTCAGTTATCTTTTACTAGTAAGCTCCGCAACTTGTATAAAATTTGATTCTGTTTTAACCCATACATAATAGTTCCTTGTGGTGCTTGTATTCTTCTTGTTACTTTGCTAAAAACAAAACAATCCACTTGATTGTTTGTACTTGTGCATTATTGGCATCTTGAATATAATTAATTGGAAATTGATATGAGATGATACAGGCCTTGAGAATAAGAATGACGGTTAGATACTTGTTTGTTAAAACGGTTTTCTTTTTTTTTTCCCCGTTCTTGGTAACTAACTCGTCAGTTGTCTTTAAAGGTAGGGCATTCTGTTGGATCGTATATCTCCATTGAATTGTACCGTAGGTTCCAGGATCGGGTATTGCCATAAACTCTTTGTGCCTCTTATGTGTTCCCAACTTTCAAGAGATGGTTCAATAGCCATTCTTCGTGATCCTATAGGTGGTGTATTGCATTGGATTGCATCCATTTATGATGGTGAACAGACAGTCACGTCAGCAATTTTTTATTGAAAAACTTGCTGGGTATGCACGTTATTTTTTCTGATAACATGAACTATGTATGCCTTCTTGCATCTACATTTCAGATTTTTTAGCAGTGATTTTGTTGCATAACATGGTTTTCAAAATTTCCCATGTCACTTATATAGTTATATATTGGTATCAAAGGAGTGCAGTGTCATGGCATCCATTTTCATTAAATTAGAACGTGTATCCATAAAACCCTTTCCACTCATTCTGATTATAGGACCCTTCTAACAATCTTGTCCACTTCATCGAGTTCAAAGTTCCAAACTTAGCCTTATAGATGGAGCTTTTCAGTTATGTCCATTTTTTCGATACTGGCATGTTGAAATAAATACTCTATTTAGTTGGTAGCAAATGATAAATATAAATGAAATGACAGTTGATAGGATTCGAGTTTGAGACTTTTGACCCTCAAAAGTCATACTGCCTCAAACAGTTACACACTGCATCATGTGATGTGGCTTCGTTGGGCTGTGGGCTTTATCAAATATCTAGAATCCCCTCAGAACCACAAACTGGTGTAATTTGGCAATTTTCGGATTTCTGTTGGTTGTGTGGGGAGCATTTGCATTGTCCAAGTGGGTATGCACTTGGGTTGAACCAATTTCGAGTCACTTAGATTAATGGATGTGTGCTGAGTCTATATCCAGTTAAGTGTGTCATATTATTTTGTAGGACTCGGCAAGTTTCATGGCTTTGTGACATTGTTAACTATTTAAACAGCCTTTTGGCTGCTTTGTAATTGACCTTAATAATTAATAAAATTGGACCATGTAGAAGTCCTTCGTTTCCATACATTGTCCACAACTGGACCTTAATCCTTTAGGCATCTACTACTATGGCTGATCTTATTTTGGTCCATGCGTGATTACAAACTAACATATTAGGTCATTTTTAAGTTTTGGTATTGCAAGTAGTATCTTTCTGAGCACCACCCAGTTCATTCGGATGATCTGTTATGTTGTTTTCTTCCACAAAATATACTTTTGAGCACATGAAAATTTTGTATTGCAGATCCCCACTGCTATCAACTTTGTTTTCTTCTTTTGTTGCGCTGTTGGGTGTATTACCAATTCGAGCTTCAAGTTTTGTGGTGAGAAAAACTATTGGGAAGTCATGGTCCAGAACTGCTTGTGAGGCTGCTTGCTCTCATTTGCTAAAGGTGAAATGAAATCTGATTATTTTGTGTAGCATGTGCTATTTTAGTATCCACTCGTAACTGCTACAAATTTTGGTTTGACGACATGACGGTTTGTTCTAATATTTGGAATATTATCTTTGTTTTCTACAGTACCATAGCATGCGAAATGTGCTATATTTCGCAATGACGGAGTTTGAGAAGGTATTCACTGTAAACAATCACTTTAGTTTGGTGAACATGTTTAGGGCGTGTTGGAAACCATGACACTCCTGACACTTAGTTGCTCATGTATGAAGAAATTTGCTTCATTTGTGTCATTTTTTTTTAATTTGAGAACCATTGAACAAAAAGAACCATAAGAGAATTAATAAAACTTGAGAGTGAAAAACATCCAACTTACTTTCTAAGCATATGATTGTATGGACCATAATTAATTATAATTTTCGTTTTTGTAACATGTTAGATCACTTAGAGAAGTGCCTAGTTTATTTTTGGTTATGTTCTCATCTTTTGCTTTGAGGCATTGCATTATCAGTATGGTATAGTAGTCCAAATATAGAAGAAGCCCCGTCACAAGATGTAATTTGATGAGCTTTTGAAGTTGCAGTAAGTTCAAACACAATATGTGAGTAAATGAAACTTGTAAATCAGAATATCGTTCTCATTGTTTACTTATTAGGTTTTGACATAGTTGTCACTTGTCAGAATTATGCAGTACAATGCCTAATATCAATAATTAATCAAATTTCCGCAACTGATTGTTTATGGACATTGTTTAGTTTTCAGAAACACCAGATTGGGCATTTATGAAGAAAGCAAGTCAGAAGTTGTCATTTTTGTTCTGTATGGATGACCATTGGGCTCCAATGCATTTGTATGAGGAGGTAAGATATAAACTACTTTCCATTTTGTCAATCAACTCTGCTGCATGAAGATAGTTCTCCAAATACTTTGGCTAAAGAGGTTGTAGTCATAATAGTGTTTATGATGATTAGAACATTGATAATCGGTTTGGAATCTTTAACTTTGTAATACGTAGTCAATAGCATCGAAATAATAAGGAACTATCATTGGTTGGCCTAGTGGTAAATAAAGAAAGGACTGTAGTTTGATAAAGGGCTAAGAGAGAATGAGTTCAATCCATGATAGCTACCTACCAAAGATTTAATATCCTACGAGTTTCATTAACACCAAAATGTAGTAGGGTCAGACGGGTTATCCTGTGAGATTAGTCGAGGAGTACATAAGTTGGCCTGACACTCATGGATATCAAAAAAGGAAAAAAAAAAAAAAAACAGGGTTGAATCCTACTGATTAGCTTTTTCAAGAAAAATGGAGGGGCAAAAGAGCTCAAAATTATTACATTGCAATGGTGATGTCAAGTTCTACTTTGTTAGTTTGTGATCTCTTTTCTCCACAGATTTCCAAGCAGGTCCCTGAAATTGATCTATCAGTTGAAAGGGAGGGCCATTCACATGCATTTTGCTGCTCTGAAGCTGGCTCATTTTATATTGCTCAATATGTGGCAAGCTTGATCAAGAAACATCTCTCAGATTAA ATGGGCCAGCAAGTTCTGCAATCTTTTAGTAAAAGCCCTGTGGAGTTTCGTTTATGCAATGTATCAGGTTACACCAATGAATTACTGGAGATTCATTCCGACGATCCATCATTGCATGTATTGTTCATACCTGGAAATCCAGGGATTATTTCATTTTATAAAGATTTTGTTGAATCACTGTATCAGTTGCTTGGAGGCCGTGTGTCTATAACAGCTATTGGACATATATGTCAAACGAAGAAGGACTGGGAAGGTGGAAGGTTATTTTCGTTACAAGAACAAATTGATCATAAGATTGAATTTGTTAGACAGGAGTTACCAAATAAAGACATCCCGTTACTACTGGTAGGGCATTCTGTTGGATCGTATATCTCCATTGAATTGTACCGTAGGTTCCAGGATCGGGTGGTGTATTGCATTGGATTGCATCCATTTATGATGGTGAACAGACAGTCACGTCAGCAATTTTTTATTGAAAAACTTGCTGGATCCCCACTGCTATCAACTTTGTTTTCTTCTTTTGTTGCGCTGTTGGGTGTATTACCAATTCGAGCTTCAAGTTTTGTGGTGAGAAAAACTATTGGGAAGTCATGGTCCAGAACTGCTTGTGAGGCTGCTTGCTCTCATTTGCTAAAGTACCATAGCATGCGAAATGTGCTATATTTCGCAATGACGGAGTTTGAGAAGTTTTCAGAAACACCAGATTGGGCATTTATGAAGAAAGCAAGTCAGAAGTTGTCATTTTTGTTCTGTATGGATGACCATTGGGCTCCAATGCATTTGTATGAGGAGATTTCCAAGCAGGTCCCTGAAATTGATCTATCAGTTGAAAGGGAGGGCCATTCACATGCATTTTGCTGCTCTGAAGCTGGCTCATTTTATATTGCTCAATATGTGGCAAGCTTGATCAAGAAACATCTCTCAGATTAA ATGGGCCAGCAAGTTCTGCAATCTTTTAGTAAAAGCCCTGTGGAGTTTCGTTTATGCAATGTATCAGGTTACACCAATGAATTACTGGAGATTCATTCCGACGATCCATCATTGCATGTATTGTTCATACCTGGAAATCCAGGGATTATTTCATTTTATAAAGATTTTGTTGAATCACTGTATCAGTTGCTTGGAGGCCGTGTGTCTATAACAGCTATTGGACATATATGTCAAACGAAGAAGGACTGGGAAGGTGGAAGGTTATTTTCGTTACAAGAACAAATTGATCATAAGATTGAATTTGTTAGACAGGAGTTACCAAATAAAGACATCCCGTTACTACTGGTAGGGCATTCTGTTGGATCGTATATCTCCATTGAATTGTACCGTAGGTTCCAGGATCGGGTGGTGTATTGCATTGGATTGCATCCATTTATGATGGTGAACAGACAGTCACGTCAGCAATTTTTTATTGAAAAACTTGCTGGATCCCCACTGCTATCAACTTTGTTTTCTTCTTTTGTTGCGCTGTTGGGTGTATTACCAATTCGAGCTTCAAGTTTTGTGGTGAGAAAAACTATTGGGAAGTCATGGTCCAGAACTGCTTGTGAGGCTGCTTGCTCTCATTTGCTAAAGTACCATAGCATGCGAAATGTGCTATATTTCGCAATGACGGAGTTTGAGAAGTTTTCAGAAACACCAGATTGGGCATTTATGAAGAAAGCAAGTCAGAAGTTGTCATTTTTGTTCTGTATGGATGACCATTGGGCTCCAATGCATTTGTATGAGGAGATTTCCAAGCAGGTCCCTGAAATTGATCTATCAGTTGAAAGGGAGGGCCATTCACATGCATTTTGCTGCTCTGAAGCTGGCTCATTTTATATTGCTCAATATGTGGCAAGCTTGATCAAGAAACATCTCTCAGATTAA MGQQVLQSFSKSPVEFRLCNVSGYTNELLEIHSDDPSLHVLFIPGNPGIISFYKDFVESLYQLLGGRVSITAIGHICQTKKDWEGGRLFSLQEQIDHKIEFVRQELPNKDIPLLLVGHSVGSYISIELYRRFQDRVVYCIGLHPFMMVNRQSRQQFFIEKLAGSPLLSTLFSSFVALLGVLPIRASSFVVRKTIGKSWSRTACEAACSHLLKYHSMRNVLYFAMTEFEKFSETPDWAFMKKASQKLSFLFCMDDHWAPMHLYEEISKQVPEIDLSVEREGHSHAFCCSEAGSFYIAQYVASLIKKHLSD Homology
BLAST of ClCG04G010350 vs. NCBI nr
Match: XP_038881163.1 (lipid droplet-associated hydrolase [Benincasa hispida]) HSP 1 Score: 598.2 bits (1541), Expect = 4.0e-167 Identity = 294/309 (95.15%), Postives = 296/309 (95.79%), Query Frame = 0
BLAST of ClCG04G010350 vs. NCBI nr
Match: KAA0025227.1 (lipid droplet-associated hydrolase [Cucumis melo var. makuwa] >TYK07439.1 lipid droplet-associated hydrolase [Cucumis melo var. makuwa]) HSP 1 Score: 592.4 bits (1526), Expect = 2.2e-165 Identity = 285/309 (92.23%), Postives = 296/309 (95.79%), Query Frame = 0
BLAST of ClCG04G010350 vs. NCBI nr
Match: XP_008462607.1 (PREDICTED: LOW QUALITY PROTEIN: lipid droplet-associated hydrolase [Cucumis melo]) HSP 1 Score: 590.1 bits (1520), Expect = 1.1e-164 Identity = 284/309 (91.91%), Postives = 295/309 (95.47%), Query Frame = 0
BLAST of ClCG04G010350 vs. NCBI nr
Match: XP_011657723.1 (lipid droplet-associated hydrolase isoform X2 [Cucumis sativus]) HSP 1 Score: 584.3 bits (1505), Expect = 6.0e-163 Identity = 282/309 (91.26%), Postives = 294/309 (95.15%), Query Frame = 0
BLAST of ClCG04G010350 vs. NCBI nr
Match: XP_004143334.1 (lipid droplet-associated hydrolase isoform X1 [Cucumis sativus] >KGN48293.1 hypothetical protein Csa_004459 [Cucumis sativus]) HSP 1 Score: 584.3 bits (1505), Expect = 6.0e-163 Identity = 282/309 (91.26%), Postives = 294/309 (95.15%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy Swiss-Prot
Match: Q5HZX7 (Lipid droplet-associated hydrolase OS=Rattus norvegicus OX=10116 GN=Ldah PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 8.0e-25 Identity = 82/290 (28.28%), Postives = 133/290 (45.86%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy Swiss-Prot
Match: Q8BVA5 (Lipid droplet-associated hydrolase OS=Mus musculus OX=10090 GN=Ldah PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.2e-22 Identity = 78/291 (26.80%), Postives = 131/291 (45.02%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy Swiss-Prot
Match: Q54LL8 (Lipid droplet-associated hydrolase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0286581 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-21 Identity = 81/271 (29.89%), Postives = 126/271 (46.49%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy Swiss-Prot
Match: Q5F477 (Lipid droplet-associated hydrolase OS=Gallus gallus OX=9031 GN=LDAH PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21 Identity = 78/268 (29.10%), Postives = 130/268 (48.51%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy Swiss-Prot
Match: Q9H6V9 (Lipid droplet-associated hydrolase OS=Homo sapiens OX=9606 GN=LDAH PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 7.0e-21 Identity = 81/292 (27.74%), Postives = 130/292 (44.52%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy TrEMBL
Match: A0A5A7SKD4 (Lipid droplet-associated hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001690 PE=3 SV=1) HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165 Identity = 285/309 (92.23%), Postives = 296/309 (95.79%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy TrEMBL
Match: A0A1S3CHU9 (LOW QUALITY PROTEIN: lipid droplet-associated hydrolase OS=Cucumis melo OX=3656 GN=LOC103500925 PE=3 SV=1) HSP 1 Score: 590.1 bits (1520), Expect = 5.3e-165 Identity = 284/309 (91.91%), Postives = 295/309 (95.47%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy TrEMBL
Match: A0A0A0KFF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454400 PE=3 SV=1) HSP 1 Score: 584.3 bits (1505), Expect = 2.9e-163 Identity = 282/309 (91.26%), Postives = 294/309 (95.15%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy TrEMBL
Match: A0A6J1EDI9 (lipid droplet-associated hydrolase-like OS=Cucurbita moschata OX=3662 GN=LOC111433317 PE=3 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 2.7e-153 Identity = 271/310 (87.42%), Postives = 284/310 (91.61%), Query Frame = 0
BLAST of ClCG04G010350 vs. ExPASy TrEMBL
Match: A0A6J1I921 (lipid droplet-associated hydrolase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471128 PE=3 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 4.7e-153 Identity = 263/309 (85.11%), Postives = 287/309 (92.88%), Query Frame = 0
BLAST of ClCG04G010350 vs. TAIR 10
Match: AT3G11620.2 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 382.5 bits (981), Expect = 3.2e-106 Identity = 174/306 (56.86%), Postives = 232/306 (75.82%), Query Frame = 0
BLAST of ClCG04G010350 vs. TAIR 10
Match: AT3G11620.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 382.5 bits (981), Expect = 3.2e-106 Identity = 174/306 (56.86%), Postives = 232/306 (75.82%), Query Frame = 0
BLAST of ClCG04G010350 vs. TAIR 10
Match: AT3G11620.3 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 280.0 bits (715), Expect = 2.3e-75 Identity = 129/227 (56.83%), Postives = 173/227 (76.21%), Query Frame = 0
BLAST of ClCG04G010350 vs. TAIR 10
Match: AT3G11620.4 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 280.0 bits (715), Expect = 2.3e-75 Identity = 129/227 (56.83%), Postives = 173/227 (76.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|