ClCG03G017660 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA ATGGAGACGTTGCGACGCCACTCGGGAGCAGCCAGTTGCCGGAGCTCCACCGGGGTTGGGACCATGGAAACAATTAAAGAAATTAGATCTCGGAAGGAACGAGTGGTCGAGGCAACGAAATCGTCGAAGAAATCGATGGAAAAATGGTGGAATGATCCAGAGAATAAGAGGAAAAGGCGAGTGGCAAAATACAAATTCTATGCTGTGGATGCCAAAGTGAAGAATTCCATTAAGGAAGGCTTCAAATGGATGAAGAAAAAATGTTCTAAAATCATCTCTGGATTTTAA METLRRHSGAASCRSSTGVGTMETIKEIRSRKERVVEATKSSKKSMEKWWNDPENKRKRRVAKYKFYAVDAKVKNSIKEGFKWMKKKCSKIISGF Homology
BLAST of ClCG03G017660 vs. NCBI nr
Match: KAG6588594.1 (hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020542.1 hypothetical protein SDJN02_17228, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 1.0e-20 Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0
BLAST of ClCG03G017660 vs. NCBI nr
Match: KAG6588612.1 (hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.4 bits (272), Expect = 1.7e-20 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of ClCG03G017660 vs. NCBI nr
Match: KAA0050944.1 (hypothetical protein E6C27_scaffold761G00710 [Cucumis melo var. makuwa] >TYK10291.1 hypothetical protein E5676_scaffold16G004420 [Cucumis melo var. makuwa]) HSP 1 Score: 90.5 bits (223), Expect = 8.4e-15 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of ClCG03G017660 vs. NCBI nr
Match: KAG7031408.1 (hypothetical protein SDJN02_05448, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.4 bits (202), Expect = 2.3e-12 Identity = 36/64 (56.25%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of ClCG03G017660 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia]) HSP 1 Score: 82.0 bits (201), Expect = 3.0e-12 Identity = 36/66 (54.55%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A5D3CEU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004420 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.1e-15 Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A7J7D0P0 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW12G01113 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12 Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 0
BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12 Identity = 36/66 (54.55%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A2P5D158 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_106230 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11 Identity = 35/62 (56.45%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of ClCG03G017660 vs. ExPASy TrEMBL
Match: A0A2P5EVE2 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_146600 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11 Identity = 35/62 (56.45%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of ClCG03G017660 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of ClCG03G017660 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08 Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of ClCG03G017660 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 51.2 bits (121), Expect = 5.3e-07 Identity = 23/43 (53.49%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of ClCG03G017660 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 50.8 bits (120), Expect = 6.9e-07 Identity = 24/68 (35.29%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of ClCG03G017660 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 48.1 bits (113), Expect = 4.4e-06 Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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