ClCG03G014040 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G014040
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative
Location	CG_Chr03: 28907085 .. 28908727 (-)
RNA-Seq Expression	ClCG03G014040
Synteny	ClCG03G014040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTCTCTATTCTCTACAAACAAACCATTCCTTCTCTCCCTTTTCAACAACTCTGTTTCCCTCCCCTTTCTTCACCTTCAAGTTCAGTGTAAAAGGAGCAACCCCATCATCCCATCTTCCTCTCTCAATTCTCTTCACCATTTCCATGGCTTCAAAGTTAGAAGCTTTTTCTCTCTTCTTCAACTTGCTTCTTCTGCTAGCTTCTTTTGCAGCCTCAAACATAGACCAAGACAGAACTGAGTGCTCAGACCAACTCATCGGCCTCGCTCCTTGCTTGCCGTATGTCAGCGGCGATGCCAAGATACCAACCATTGATTGCTGCAGTGGACTGAAACAGGTGGTGCAGAAGAGCAAGAAATGCCTTTGTGTCCTTATCAAGGACAAAGATGACCCTAATCTTGGCCTCAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTGATGCCTGCCATGCCCCTGCCAACATCACTGAGTGCATCTGTAAGCAAACTAATCCCTTGGTTTTTTTTTCTTTTCTCTTTTTCCTCTGTTTTGTTATACGAACAATATCACATAAACTCAGAAAATACAAAAATTTGTATACAGCAGAAAATTTGAGCTTAACAAATTCATGTTGATCTTTCTTATGAGATAAATAAAAGTGTTGATGGAAAATGGTGCTAAGTGCAAACTCTACTTTGTCCACAAGATGCTACAAACTCTACTTTATAGTGTAAATCAAACGGTTAGATGGAAGAAAGGTGGTATGAGATAAAAGTGTTGATGGAAAATGGTGTAATTCCAATTTGAAGAAGAGACATATTTATAGGCTAATTCGTAGTTATTCAAATAGTCAATGTCTCTTTTTACAATCACTTTCTCATGAAAGAATGCAATTCATAGAATTGAAAGGATGTAATTCTTACTAAAAGAAAAGTCACATACCATTTATTCCGACATATTTTTCACTTTGACATTTTCTCAATTGGGCATTGTGTCAAACACCTTGAGTGCATCTGTTGATGTACAAAAAGCTCCGTATTTCTCAGTTGGGCATTTTGTCATACACCTTGAGTGCATCTCTATGTAAACAAATTCCATTGTTTTCCACTCTATTTCTCAGTTGGGCATTTTATCAAACAGCTTCTGGGCATTGTATTTAACCTTGTTTTGTATGTGGGTTTTCAGCTCTTTTGCACTTAGCACCAAATTCTACAGAAGCAAAGATATTCAAAGAATCTAATCCCAGCAGTGGACCAAGCAGTTCCCCAGATACTAAAGGTAAAAACCAAACTTCTATCTAACTTAACAGAAAGAATAATTAGCTAAGTGGGTAAATTTTGATTTGCAGTTCATGGGAGTTCGTCCATTGCCAACGAGAAAAGCGATGGTGGAATGGGAAAGAGATGGGTTGGAGGAACAGAGATGATTATGGAGATTCTGCTTGGGTTCTTCATTCTCTCGCATCTTAATCTAATGCTCATCTAGAAATTAGAACGAACTGTTTGTAATTTATGAGGTTTCTTGATCATCCTGCAATACGTATGCCGTTTTCTTGCATTGTTTAGAACAGAATTTCAGGCGAATTTAAGAGTTTTTCTTTCAATTTTCCGTGGAATGTTGATTGTGTACAAATTCTATCAAATCTATTTTAGTCTCGAA

mRNA sequence

TTTCTCTCTCTATTCTCTACAAACAAACCATTCCTTCTCTCCCTTTTCAACAACTCTGTTTCCCTCCCCTTTCTTCACCTTCAAGTTCAGTGTAAAAGGAGCAACCCCATCATCCCATCTTCCTCTCTCAATTCTCTTCACCATTTCCATGGCTTCAAAGTTAGAAGCTTTTTCTCTCTTCTTCAACTTGCTTCTTCTGCTAGCTTCTTTTGCAGCCTCAAACATAGACCAAGACAGAACTGAGTGCTCAGACCAACTCATCGGCCTCGCTCCTTGCTTGCCGTATGTCAGCGGCGATGCCAAGATACCAACCATTGATTGCTGCAGTGGACTGAAACAGGTGGTGCAGAAGAGCAAGAAATGCCTTTGTGTCCTTATCAAGGACAAAGATGACCCTAATCTTGGCCTCAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTGATGCCTGCCATGCCCCTGCCAACATCACTGAGTGCATCTCTCTTTTGCACTTAGCACCAAATTCTACAGAAGCAAAGATATTCAAAGAATCTAATCCCAGCAGTGGACCAAGCAGTTCCCCAGATACTAAAGTTCATGGGAGTTCGTCCATTGCCAACGAGAAAAGCGATGGTGGAATGGGAAAGAGATGGGTTGGAGGAACAGAGATGATTATGGAGATTCTGCTTGGGTTCTTCATTCTCTCGCATCTTAATCTAATGCTCATCTAGAAATTAGAACGAACTGTTTGTAATTTATGAGGTTTCTTGATCATCCTGCAATACGTATGCCGTTTTCTTGCATTGTTTAGAACAGAATTTCAGGCGAATTTAAGAGTTTTTCTTTCAATTTTCCGTGGAATGTTGATTGTGTACAAATTCTATCAAATCTATTTTAGTCTCGAA

Coding sequence (CDS)

ATGGCTTCAAAGTTAGAAGCTTTTTCTCTCTTCTTCAACTTGCTTCTTCTGCTAGCTTCTTTTGCAGCCTCAAACATAGACCAAGACAGAACTGAGTGCTCAGACCAACTCATCGGCCTCGCTCCTTGCTTGCCGTATGTCAGCGGCGATGCCAAGATACCAACCATTGATTGCTGCAGTGGACTGAAACAGGTGGTGCAGAAGAGCAAGAAATGCCTTTGTGTCCTTATCAAGGACAAAGATGACCCTAATCTTGGCCTCAAAATCAATGGCTCCCTTGCTTTGGCCCTCCCTGATGCCTGCCATGCCCCTGCCAACATCACTGAGTGCATCTCTCTTTTGCACTTAGCACCAAATTCTACAGAAGCAAAGATATTCAAAGAATCTAATCCCAGCAGTGGACCAAGCAGTTCCCCAGATACTAAAGTTCATGGGAGTTCGTCCATTGCCAACGAGAAAAGCGATGGTGGAATGGGAAAGAGATGGGTTGGAGGAACAGAGATGATTATGGAGATTCTGCTTGGGTTCTTCATTCTCTCGCATCTTAATCTAATGCTCATCTAG

Protein sequence

MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILSHLNLMLI

Homology

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BLAST of ClCG03G014040 vs. NCBI nr
Match: XP_038878589.1 (non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 172/187 (91.98%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCS 60
           MAS L AFSLF N LLLLASFAASNIDQDRTECSDQL GLAPCLPYVSGDAK PTIDCCS
Sbjct: 1   MASNLAAFSLFCNFLLLLASFAASNIDQDRTECSDQLTGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP+ CHAPANITECISLLHL+PNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPNDCHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILS 180
           TEAKIFKESNP+SGPSSSPDTKVHGSSS ANEKSDGGMGKRW+G TEMIM ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSGPSSSPDTKVHGSSSTANEKSDGGMGKRWIGSTEMIMGILLGFFILS 180

Query: 181 HLNLMLI 188
           HLNLM I
Sbjct: 181 HLNLMFI 187

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BLAST of ClCG03G014040 vs. NCBI nr
Match: XP_008451096.1 (PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cucumis melo var. makuwa] >TYK09896.1 protein YLS3-like [Cucumis melo var. makuwa])

HSP 1 Score: 335.1 bits (858), Expect = 3.9e-88
Identity = 171/187 (91.44%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCS 60
           MAS L  FS   N LLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP ACHAPANITECISLLHL+PNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILS 180
           TEAKIFKESNP+S PSSSPDTKVHGSSS ANEKSDGGMGKRW+GGTEMIM+ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMLI 188
           HLNLM I
Sbjct: 181 HLNLMFI 187

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BLAST of ClCG03G014040 vs. NCBI nr
Match: XP_004144111.1 (protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_007242 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 166/187 (88.77%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCS 60
           MAS L  FS   N LLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAK PTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP ACHAPANITECISLLHL+PNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILS 180
           TEAKIFKESNP+S PSSSPDTKVHGSSS+ANEKSDGGMGKRW+GGTEMI++ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMLI 188
           HLNLM I
Sbjct: 181 HLNLMFI 187

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BLAST of ClCG03G014040 vs. NCBI nr
Match: XP_023515387.1 (protein YLS3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 2.3e-77
Identity = 155/178 (87.08%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 7   AFSLFFN-LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQV 66
           A  +F N LLLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCSGLKQV
Sbjct: 2   ALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQV 61

Query: 67  VQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKI 126
           VQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHLAPNSTEAKI
Sbjct: 62  VQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAKI 121

Query: 127 FKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILSHLN 184
           FKESN +S PSS+PD+KVHGSSS ANEKSDGG  K+ +GG  MIMEILLGFFILSHLN
Sbjct: 122 FKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGAGMIMEILLGFFILSHLN 179

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BLAST of ClCG03G014040 vs. NCBI nr
Match: XP_022960972.1 (protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023884.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.9 bits (764), Expect = 3.1e-77
Identity = 154/178 (86.52%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 7   AFSLFFN-LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQV 66
           A  +F N LLLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCSGLKQV
Sbjct: 2   ALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQV 61

Query: 67  VQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKI 126
           VQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHLAPNSTEAKI
Sbjct: 62  VQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAKI 121

Query: 127 FKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILSHLN 184
           FKESN +S PSS+PD+KVHGS+S ANEKSDGG  K+ +GG  MIMEILLGFFILSHLN
Sbjct: 122 FKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLN 179

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BLAST of ClCG03G014040 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 6.7e-35
Identity = 81/174 (46.55%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 9   SLFFNLLL--LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVV 68
           +LF  +++  +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV+
Sbjct: 7   TLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVI 66

Query: 69  QKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPA-NITECISLLHLAPNSTEAKI 128
           +KS+KC+C+L++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK 
Sbjct: 67  RKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKE 126

Query: 129 FKE-SNPSSGPSSSPDTKVH----GSSSIANEKSDGGMGKRWVGGTEMIMEILL 175
           F+         +S+  T++H    G       KS+G   K W+ G E+++ +L+
Sbjct: 127 FENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 179

[Close]

BLAST of ClCG03G014040 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-34
Identity = 81/194 (41.75%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 14  LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVVQKSKKCL 73
           +++ +   AA +  +D+ EC++QL+G+A CLPYV G AK PT DCCSGLKQV+  +KKCL
Sbjct: 16  IVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCL 75

Query: 74  CVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKIF---KESN 133
           CV+I+D++DP+LGL+IN SLALALP  CHA A++T+C +LLHL PNS +A++F    +  
Sbjct: 76  CVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGL 135

Query: 134 PSSGPSSSPDTKVHGSSSIA-NEKSDGGMG-----------------KRWVGGTEMIMEI 187
             +GP+S+P     G  SI+    SD G                   K+W+G     +E+
Sbjct: 136 NKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG-----LEV 195

[Close]

BLAST of ClCG03G014040 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.4e-32
Identity = 75/204 (36.76%), Postives = 123/204 (60.29%), Query Frame = 0


Query: 4   KLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLK 63
           K+ A ++   ++ ++   A ++  +D+ EC+ QL+G+A CLPYV G AK PT DCCSGLK
Sbjct: 7   KVMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLK 66

Query: 64  QVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEA 123
           QV+    KCLC++I++++DP+LGL++N SLALALP  CHA A+IT+C +LLHL PNS +A
Sbjct: 67  QVINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDA 126

Query: 124 KIF---------------------KESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRW 183
           ++F                     + ++ SS P SS       ++S+          K+W
Sbjct: 127 QVFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQW 186

Query: 184 VGGTEMIMEILLGFFILSHLNLML 187
           +G     +E++  FF++ ++ +++
Sbjct: 187 LG-----LEVVAHFFVIFYIFILV 205

[Close]

BLAST of ClCG03G014040 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 24  SNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVVQK--SKKCLCVLIKDKD 83
           S + QD   C D +  L  CLP+V+  AK P   CCS LK  + K  ++KCLC L+KD+D
Sbjct: 29  SELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRD 88

Query: 84  DPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKIFKESNPSS 134
           DP LG K++ + A++LP ACH PANI++C  LLHL P+S  ++IFK+   SS
Sbjct: 89  DPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESS 140

[Close]

BLAST of ClCG03G014040 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 48/153 (31.37%), Postives = 67/153 (43.79%), Query Frame = 0


Query: 14  LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVVQKSKKCL 73
           L+ L A F    + Q    C+ +L+ LAPC P+V G A++P   CC  L Q+  +   CL
Sbjct: 11  LISLSAFFLRMVLAQVPATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCL 70

Query: 74  CVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKIFKESNPSS 133
           C+ + +    +    IN +LAL LP  C+ PAN + C S                S P  
Sbjct: 71  CLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTCSS----------------SFPGE 130

Query: 134 GPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGT 167
            PS S       SSS  ++ S G      V  T
Sbjct: 131 APSDSSSVAPPPSSSTGSQISQGAKNNSRVAAT 147

[Close]

BLAST of ClCG03G014040 vs. ExPASy TrEMBL
Match: A0A5A7UIG8 (Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00060 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-88
Identity = 171/187 (91.44%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCS 60
           MAS L  FS   N LLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP ACHAPANITECISLLHL+PNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILS 180
           TEAKIFKESNP+S PSSSPDTKVHGSSS ANEKSDGGMGKRW+GGTEMIM+ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMLI 188
           HLNLM I
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of ClCG03G014040 vs. ExPASy TrEMBL
Match: A0A1S3BRH1 (protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.9e-88
Identity = 171/187 (91.44%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCS 60
           MAS L  FS   N LLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCS
Sbjct: 1   MASNLATFSFICNFLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP ACHAPANITECISLLHL+PNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILS 180
           TEAKIFKESNP+S PSSSPDTKVHGSSS ANEKSDGGMGKRW+GGTEMIM+ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSAANEKSDGGMGKRWIGGTEMIMKILLGFFILS 180

Query: 181 HLNLMLI 188
           HLNLM I
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of ClCG03G014040 vs. ExPASy TrEMBL
Match: A0A0A0LX07 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.0e-86
Identity = 166/187 (88.77%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 1   MASKLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCS 60
           MAS L  FS   N LLLLASF+AS+IDQDRT+CSDQLIGLA CLPYVSGDAK PTIDCCS
Sbjct: 1   MASALSTFSFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCCS 60

Query: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNS 120
           GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALP ACHAPANITECISLLHL+PNS
Sbjct: 61  GLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPNS 120

Query: 121 TEAKIFKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILS 180
           TEAKIFKESNP+S PSSSPDTKVHGSSS+ANEKSDGGMGKRW+GGTEMI++ILLGFFILS
Sbjct: 121 TEAKIFKESNPTSEPSSSPDTKVHGSSSVANEKSDGGMGKRWIGGTEMIVKILLGFFILS 180

Query: 181 HLNLMLI 188
           HLNLM I
Sbjct: 181 HLNLMFI 187

[Close]

BLAST of ClCG03G014040 vs. ExPASy TrEMBL
Match: A0A6J1H8W0 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.5e-77
Identity = 154/178 (86.52%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 7   AFSLFFN-LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQV 66
           A  +F N LLLLLA FAASNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCSGLKQV
Sbjct: 2   ALFVFCNLLLLLLAPFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQV 61

Query: 67  VQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKI 126
           VQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHLAPNSTEAKI
Sbjct: 62  VQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAKI 121

Query: 127 FKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILSHLN 184
           FKESN +S PSS+PD+KVHGS+S ANEKSDGG  K+ +GG  MIMEILLGFFILSHLN
Sbjct: 122 FKESNSTSEPSSAPDSKVHGSASTANEKSDGGTSKKPIGGAGMIMEILLGFFILSHLN 179

[Close]

BLAST of ClCG03G014040 vs. ExPASy TrEMBL
Match: A0A6J1JIZ5 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.3e-77
Identity = 154/178 (86.52%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 7   AFSLFFN-LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQV 66
           A  +F N LLLLLA FA SNIDQDRTECSDQLIGLAPCLPYVSGDAK PTIDCCSGLKQV
Sbjct: 2   ALFVFCNLLLLLLAPFAVSNIDQDRTECSDQLIGLAPCLPYVSGDAKTPTIDCCSGLKQV 61

Query: 67  VQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKI 126
           VQKSKKCLCVLIKDKDDPNLGLKINGSLAL LP+ACHAP+NITECISLLHLAPNSTEAKI
Sbjct: 62  VQKSKKCLCVLIKDKDDPNLGLKINGSLALGLPNACHAPSNITECISLLHLAPNSTEAKI 121

Query: 127 FKESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRWVGGTEMIMEILLGFFILSHLN 184
           FKESN +S PSS+PD+KVHGSSS ANEKSDGG  K+ +GG  MIMEILLGFFILSHLN
Sbjct: 122 FKESNSTSEPSSAPDSKVHGSSSTANEKSDGGTRKKPIGGVGMIMEILLGFFILSHLN 179

[Close]

BLAST of ClCG03G014040 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-36
Identity = 81/171 (47.37%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 9   SLFFNLLL--LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVV 68
           +LF  +++  +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV+
Sbjct: 50  TLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVI 109

Query: 69  QKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPA-NITECISLLHLAPNSTEAKI 128
           +KS+KC+C+L++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK 
Sbjct: 110 RKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKE 169

Query: 129 FKE-SNPSSGPSSSPDTKVH-GSSSIANEKSDGGMGKRWVGGTEMIMEILL 175
           F+         +S+  T++H G       KS+G   K W+ G E+++ +L+
Sbjct: 170 FENLGRIEDNYNSTSPTQIHKGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 219

[Close]

BLAST of ClCG03G014040 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 4.8e-36
Identity = 81/174 (46.55%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 9   SLFFNLLL--LLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVV 68
           +LF  +++  +L  F  S++ QDR EC++QLI L+ C+PYV GDAK PT DCC+G  QV+
Sbjct: 50  TLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVI 109

Query: 69  QKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPA-NITECISLLHLAPNSTEAKI 128
           +KS+KC+C+L++DKDDP LG+KIN +LA  LP ACH  A NIT+CIS+LHL  NST AK 
Sbjct: 110 RKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKE 169

Query: 129 FKE-SNPSSGPSSSPDTKVH----GSSSIANEKSDGGMGKRWVGGTEMIMEILL 175
           F+         +S+  T++H    G       KS+G   K W+ G E+++ +L+
Sbjct: 170 FENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWL-GVELLIYLLV 222

[Close]

BLAST of ClCG03G014040 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 81/194 (41.75%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 14  LLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVVQKSKKCL 73
           +++ +   AA +  +D+ EC++QL+G+A CLPYV G AK PT DCCSGLKQV+  +KKCL
Sbjct: 16  IVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCL 75

Query: 74  CVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKIF---KESN 133
           CV+I+D++DP+LGL+IN SLALALP  CHA A++T+C +LLHL PNS +A++F    +  
Sbjct: 76  CVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGL 135

Query: 134 PSSGPSSSPDTKVHGSSSIA-NEKSDGGMG-----------------KRWVGGTEMIMEI 187
             +GP+S+P     G  SI+    SD G                   K+W+G     +E+
Sbjct: 136 NKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG-----LEV 195

[Close]

BLAST of ClCG03G014040 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 75/204 (36.76%), Postives = 123/204 (60.29%), Query Frame = 0


Query: 4   KLEAFSLFFNLLLLLASFAASNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLK 63
           K+ A ++   ++ ++   A ++  +D+ EC+ QL+G+A CLPYV G AK PT DCCSGLK
Sbjct: 7   KVMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLK 66

Query: 64  QVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEA 123
           QV+    KCLC++I++++DP+LGL++N SLALALP  CHA A+IT+C +LLHL PNS +A
Sbjct: 67  QVINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDA 126

Query: 124 KIF---------------------KESNPSSGPSSSPDTKVHGSSSIANEKSDGGMGKRW 183
           ++F                     + ++ SS P SS       ++S+          K+W
Sbjct: 127 QVFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQW 186

Query: 184 VGGTEMIMEILLGFFILSHLNLML 187
           +G     +E++  FF++ ++ +++
Sbjct: 187 LG-----LEVVAHFFVIFYIFILV 205

[Close]

BLAST of ClCG03G014040 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 24  SNIDQDRTECSDQLIGLAPCLPYVSGDAKIPTIDCCSGLKQVVQK--SKKCLCVLIKDKD 83
           S + QD   C D +  L  CLP+V+  AK P   CCS LK  + K  ++KCLC L+KD+D
Sbjct: 29  SELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRD 88

Query: 84  DPNLGLKINGSLALALPDACHAPANITECISLLHLAPNSTEAKIFKESNPSS 134
           DP LG K++ + A++LP ACH PANI++C  LLHL P+S  ++IFK+   SS
Sbjct: 89  DPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESS 140

The following BLAST results are available for this feature:

BLAST of ClCG03G014040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878589.1	1.3e-88	91.98	non-specific lipid transfer protein GPI-anchored 6-like [Benincasa hispida]	[more]
XP_008451096.1	3.9e-88	91.44	PREDICTED: protein YLS3-like [Cucumis melo] >KAA0055642.1 protein YLS3-like [Cuc...	[more]
XP_004144111.1	6.1e-86	88.77	protein YLS3 isoform X1 [Cucumis sativus] >KGN66415.1 hypothetical protein Csa_0...	[more]
XP_023515387.1	2.3e-77	87.08	protein YLS3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960972.1	3.1e-77	86.52	protein YLS3-like [Cucurbita moschata] >KAG6590243.1 Protein YLS3, partial [Cucu...	[more]

BLAST of ClCG03G014040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I082	6.7e-35	46.55	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
O64865	1.9e-34	41.75	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	2.4e-32	36.76	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
Q9M2G1	2.8e-25	48.21	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9C9B1	2.1e-12	31.37	Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of ClCG03G014040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UIG8	1.9e-88	91.44	Protein YLS3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G000...	[more]
A0A1S3BRH1	1.9e-88	91.44	protein YLS3-like OS=Cucumis melo OX=3656 GN=LOC103492476 PE=3 SV=1	[more]
A0A0A0LX07	3.0e-86	88.77	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G602030 PE=4 SV...	[more]
A0A6J1H8W0	1.5e-77	86.52	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111461612 PE=3 SV=1	[more]
A0A6J1JIZ5	3.3e-77	86.52	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111485523 PE=3 SV=1	[more]

BLAST of ClCG03G014040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55260.2	2.1e-36	47.37	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	4.8e-36	46.55	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44300.1	1.4e-35	41.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	1.7e-33	36.76	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	2.0e-26	48.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..110 e-value: 5.0E-6 score: 36.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..110 e-value: 1.9E-13 score: 50.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 30..110 e-value: 2.1E-13 score: 51.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..153
None	No IPR available	PANTHER	PTHR33044:SF194	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 9..174
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..102 e-value: 1.14694E-18 score: 74.0002
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 9..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G014040.1	ClCG03G014040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding