ClCG03G011570 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGACAGAACGATCAAGACAATGATCAAGGGGGCCCGTCAAGCTCAAGTATGTCCCTTGAAAACATGGTAAAGAGTTTAGCTGACAGCAATATGAAATTTCAACAGGAGACTAGGAGTGGCATGGAGAGCTTGGGAAAACAAATTTCCTAATTGGCCACCACAGTAAGCAGGTTGGAGAAGAAACCTCGTAAGCTTCCCTCACAACAGGAGAAGAACCCGAGGGAGAACGTCGGTGCATTCACTTTAAGGAGTAGGAAGGAGCTCCCACCACCAATCATGTCTGTGGATGCCCTTACAGAGGTGGATTCTTCACCTTCTGAGCCAGTTGAAATATGAGGACCATCTCCTAAACCTAAAAAGGGAGTAAAATTCAATCTTCCTCCCACTGTAAATTCTAATTTAAGAAGTATTTTTCAATGTGTGAAGTGAAGGGTTGCTAATTTATTAATCCAATGTACTATAAAATTTTAAAACCTAGTATACAAGTGTAAGATACTATACTAAGGGAAAAAGTGATAACAAAATTTAAATATGATAAAAAATTTTAGTAATATGAAACATAAATATGAGACGTGATAAATCCCACTTGACTGTGTTTTGTCCTCATATGCAAAATTAATTCCAAAAGGAAACAAGATTTCTTTTATACTGATTTAGGGTAGCACTTTACCAGGCCAAGTTGAAGCAATAATGGGAGTGAGCCCTTGAAGATGGTGACCTGAAAGCGAATGATAAAAAGAGTCTGCAACTTCACTAGTTGCAAAGATGGATAGAAGGAAACGTGAATGACGGACGATGTGACTAAACGGTGGAGGATGCAAGTGCCACGACGACGACTTATAATGGAGGAGGTCGACGGCTTGGAGGACGAACAAACTTAAGGATGCCTTGTGCAAGAACGGACGACAACGAATCAGATGGCTGA ATGGGAAGACAGAACGATCAAGACAATGATCAAGGGGGCCCGTCAAGCTCAAGTATGTCCCTTGAAAACATGGTAAAGAGTTTAGCTGACAGCAATATGAAATTTCAACAGGAGACTAGGATAAGCAGGTTGGAGAAGAAACCTCGTAAGCTTCCCTCACAACAGGAGAAGAACCCGAGGGAGAACGTCGGTGCATTCACTTTAAGGAGTAGGAAGGAGCTCCCACCACCAATCATGTCTGTGGATGCCCTTACAGAGGTGGATTCTTCACCTTCTGAGCCAGATGCAAGTGCCACGACGACGACTTATAATGGAGGAGGTCGACGGCTTGGAGGACGAACAAACTTAAGGATGCCTTGTGCAAGAACGGACGACAACGAATCAGATGGCTGA ATGGGAAGACAGAACGATCAAGACAATGATCAAGGGGGCCCGTCAAGCTCAAGTATGTCCCTTGAAAACATGGTAAAGAGTTTAGCTGACAGCAATATGAAATTTCAACAGGAGACTAGGATAAGCAGGTTGGAGAAGAAACCTCGTAAGCTTCCCTCACAACAGGAGAAGAACCCGAGGGAGAACGTCGGTGCATTCACTTTAAGGAGTAGGAAGGAGCTCCCACCACCAATCATGTCTGTGGATGCCCTTACAGAGGTGGATTCTTCACCTTCTGAGCCAGATGCAAGTGCCACGACGACGACTTATAATGGAGGAGGTCGACGGCTTGGAGGACGAACAAACTTAAGGATGCCTTGTGCAAGAACGGACGACAACGAATCAGATGGCTGA MGRQNDQDNDQGGPSSSSMSLENMVKSLADSNMKFQQETRISRLEKKPRKLPSQQEKNPRENVGAFTLRSRKELPPPIMSVDALTEVDSSPSEPDASATTTTYNGGGRRLGGRTNLRMPCARTDDNESDG Homology
BLAST of ClCG03G011570 vs. NCBI nr
Match: XP_038877406.1 (uncharacterized protein LOC120069694 [Benincasa hispida]) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-06 Identity = 48/104 (46.15%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of ClCG03G011570 vs. NCBI nr
Match: XP_021763808.1 (uncharacterized protein LOC110728473 [Chenopodium quinoa]) HSP 1 Score: 58.5 bits (140), Expect = 4.8e-05 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 0
BLAST of ClCG03G011570 vs. NCBI nr
Match: XP_021738280.1 (uncharacterized protein LOC110704778 [Chenopodium quinoa] >XP_021738281.1 uncharacterized protein LOC110704778 [Chenopodium quinoa]) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-04 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of ClCG03G011570 vs. NCBI nr
Match: XP_019107873.1 (PREDICTED: uncharacterized protein LOC104906241 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 55.8 bits (133), Expect = 3.1e-04 Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 0
BLAST of ClCG03G011570 vs. NCBI nr
Match: XP_024990573.1 (uncharacterized protein LOC112524859 [Cynara cardunculus var. scolymus]) HSP 1 Score: 55.5 bits (132), Expect = 4.1e-04 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of ClCG03G011570 vs. ExPASy TrEMBL
Match: A0A6A2ZNL1 (Squalene monooxygenase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110813pilonHSYRG00278 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.8e-04 Identity = 42/90 (46.67%), Postives = 51/90 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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