ClCG03G010660 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G010660
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	4-hydroxy-4-methyl-2-oxoglutarate aldolase
Location	CG_Chr03: 19414202 .. 19416234 (+)
RNA-Seq Expression	ClCG03G010660
Synteny	ClCG03G010660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTGGAAAGCTTTTCATTCCCAAGAAGTATTAGGGCTTTTGAATGCAGGCATCAGGTGGTACTCACACTGATAATAAAGTTCATACGAAAAAGCCCCTCGTTTTTGGTTGGCTGAATTGGCTTTTGTTCGGTCATCTCCTCGTCCCCTGTTCTAGTGTTCAAACTTTATGGCGCTAAGTTTCTTCAACTTATCCTTGCTGATGCCTAGAAGAGTGATGGAGTTTATGTTGTTGAGTTTATGTTATGTGTCACTGTTCTAGGGATAGAGCTGAGATCTTGTGGATCGACAGCTTTGGTGCTGTTTGATGGGGTTCGTGGCTGAAAGACATAACAACTTGGATCTACTACAGGATGTCGTAGTTTTGTTCCTTCTTAGTGCCTTGCGTCCCAGTTGTAGAACCTTGTACTGGGTAAGTCTGATGCTAAACACTTAGGATAATTCATTTTTATGAGTCAGCAACTTTTGAAATGCCAAGTATGGAAGTTTGAAAGCAACATTTATTTTTTCTAGTTTTTGAAAAAATATAAAAATTTTAAAATTTTAAATCCTTATCTGGAAACTCAAGGAAATAAATCAAGACCATTTTATAAGAATTGAACAGCAAACAAAAGAATGAGACCAAATGAACCCTTGATCTTGTCATTGATTTGTGTGATCGAGAGCCTTCAAATAATTGAAGTTTTACTCTGAAGTGTGAGAAATAAACTACAATCATTATTCACTACTTAATCCAGAGAATGAAAGTAGTATAGGTTAGCACTTGAAAGTTTTACTCTGAGACTTCTTTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGGTTGTGAGTTTTTAGTTTTTCCTGCCATTGGGATCTTGCCCTTCATAGGTATCATATAGGTTAGCACTTGAATGTGCTATGTTAACTAAGAGGTTATATTATTTTCATTATTCAAAGTTGGTTTTGTAGTTCTTACTACTGGTTGTATTTACTGTTAACTCATTGCATATGGATTTTGAATGCCCTTCAAGATCCACCTGTGTATTAATGAAAACCCATCGAAAAACATAAAAGCTCTTAATCTTTCTACATGCTTGTGATTGTGTTTTATTTATCTGCAAAATCTTTTATGTTTTTCTTTCTTCTTTTTCTTTCAAAAACTGACCAAATGGGAGAGTTTGTGTTTTAACTGAATTCAATATTTGTCTACAAACTTAAGGTGCTTGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGACAATGTTTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGGAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGTTGGGCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGTGATATCGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGATTGGAGAAAAGCACGTTCCGATAACCGTAGCTGGGACAAGGATCATGGATGGGGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAGAGAAGTGTTGATTAATTTCCCTTGCAAAGATTTTGATGGCAAGATGATATATTGTTATATGAGGGCAAGACCGAGGACGAGGGCAAGAGCAAGAGCTTGTGAGTAATGCTGTTGATGTCTAGTTGTGGACCCTAAAATTCAACTCCTTGTTATATTTATCACTAAAATTATGTTATGGTTGAGCTTAATATGATGTTGTGTTCTGTGAAAGATGAACTGCTGCATTAATCTCTTAATAGTGTTAAGAGGCCTTTACTGTTGTAAGCAACATATTGT

mRNA sequence

ATGTTGTGGAAAGCTTTTCATTCCCAAGAAGTATTAGGGCTTTTGAATGCAGGCATCAGGTGCTTGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGACAATGTTTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGGAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGTTGGGCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGTGATATCGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGATTGGAGAAAAGCACGTTCCGATAACCGTAGCTGGGACAAGGATCATGGATGGGGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAGAGAAGTGTTGATTAATTTCCCTTGCAAAGATTTTGATGGCAAGATGATATATTGTTATATGAGGGCAAGACCGAGGACGAGGGCAAGAGCAAGAGCTTGTGAGTAATGCTGTTGATGTCTAGTTGTGGACCCTAAAATTCAACTCCTTGTTATATTTATCACTAAAATTATGTTATGGTTGAGCTTAATATGATGTTGTGTTCTGTGAAAGATGAACTGCTGCATTAATCTCTTAATAGTGTTAAGAGGCCTTTACTGTTGTAAGCAACATATTGT

Coding sequence (CDS)

ATGTTGTGGAAAGCTTTTCATTCCCAAGAAGTATTAGGGCTTTTGAATGCAGGCATCAGGTGCTTGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGACAATGTTTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGGAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGTTGGGCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGTGATATCGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGATTGGAGAAAAGCACGTTCCGATAACCGTAGCTGGGACAAGGATCATGGATGGGGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAG

Protein sequence

MLWKAFHSQEVLGLLNAGIRCLEQMALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV

Homology

[Close]

BLAST of ClCG03G010660 vs. NCBI nr
Match: XP_008443692.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo] >XP_038880156.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Benincasa hispida] >KAA0038259.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo var. makuwa] >TYK30658.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 7.9e-89
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. NCBI nr
Match: XP_022988625.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_022988626.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. NCBI nr
Match: XP_004139103.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus] >KGN66670.1 hypothetical protein Csa_007309 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 1.8e-88
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. NCBI nr
Match: XP_022150003.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Momordica charantia])

HSP 1 Score: 335.5 bits (859), Expect = 3.0e-88
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLI+SGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLILSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKRIGEKHVP+T+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRIGEKHVPLTIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. NCBI nr
Match: XP_023515582.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo] >XP_023515583.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 3.0e-88
Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy Swiss-Prot
Match: Q9FFE0 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.5e-79
Identity = 141/166 (84.94%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HP+KA KK +GE+ VP+ +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy Swiss-Prot
Match: Q9M8R9 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-77
Identity = 138/166 (83.13%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN LIR FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HP+KA KK +GE+ V + +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy Swiss-Prot
Match: Q9FH13 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.8e-64
Identity = 116/166 (69.88%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVL+R  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KG G VLV+DGGGS RCA++GGN    AQNNGW+GIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           +P+K+ KK  GEK+VP+ + GT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy Swiss-Prot
Match: Q46ZV6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.2e-49
Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = 0


Query: 30  TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGR 89
           T ++CDAN   +  G LR + P+F+ +G++Q F+GP  TLK+FEDN L+RE LE  G GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 90  VLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKA 149
           VLVVDGGGS RCA++GGN  + A+ NGW GI+VNGCVRD  E++ CDIG+RALA+HP K+
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 150 YKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTEL 189
            K+  GE+ V + + G  +  G W+Y D DG+LVS  +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

[Close]

BLAST of ClCG03G010660 vs. ExPASy Swiss-Prot
Match: A9AHQ6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=Bmul_1223 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.9e-49
Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 30  TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGR 89
           T ++CDA+   + +G LR L+P  + YG    F+GP  TLKVFEDN L+R  LE+ G GR
Sbjct: 5   TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64

Query: 90  VLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKA 149
           VLVVDGG S RCA++GGN    A+ NGWAGIVV+GCVRD  E+  C +GV ALA+HP K+
Sbjct: 65  VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124

Query: 150 YKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELS 190
            K+  GE+ VP+TV GTRI  GEW+YAD DG+LVS T L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164

[Close]

BLAST of ClCG03G010660 vs. ExPASy TrEMBL
Match: A0A5D3E4B6 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00850 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.8e-89
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy TrEMBL
Match: A0A1S3B858 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103487227 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.8e-89
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy TrEMBL
Match: A0A6J1JHR3 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita maxima OX=3661 GN=LOC111485820 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.5e-89
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy TrEMBL
Match: A0A0A0LXT5 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_1G657460 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.5e-89
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. ExPASy TrEMBL
Match: A0A6J1H9P8 (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC111461380 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.5e-88
Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MALVTTAEVCDANPQLIV+GELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVNGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HPMKAYKKR+GEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of ClCG03G010660 vs. TAIR 10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-80
Identity = 141/166 (84.94%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HP+KA KK +GE+ VP+ +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of ClCG03G010660 vs. TAIR 10
Match: AT5G16450.2 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-80
Identity = 141/166 (84.94%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HP+KA KK +GE+ VP+ +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of ClCG03G010660 vs. TAIR 10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 290.8 bits (743), Expect = 7.9e-79
Identity = 138/166 (83.13%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN LIR FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWAGI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           HP+KA KK +GE+ V + +AGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of ClCG03G010660 vs. TAIR 10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-65
Identity = 116/166 (69.88%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 25  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 84
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVL+R  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 85  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 144
           KG G VLV+DGGGS RCA++GGN    AQNNGW+GIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 145 HPMKAYKKRIGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 191
           +P+K+ KK  GEK+VP+ + GT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

The following BLAST results are available for this feature:

BLAST of ClCG03G010660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443692.1	7.9e-89	99.40	PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo] ...	[more]
XP_022988625.1	1.3e-88	98.19	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_022...	[more]
XP_004139103.1	1.8e-88	98.80	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus] >KGN6667...	[more]
XP_022150003.1	3.0e-88	98.19	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Momordica charantia]	[more]
XP_023515582.1	3.0e-88	97.59	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pep...	[more]

BLAST of ClCG03G010660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFE0	1.5e-79	84.94	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX...	[more]
Q9M8R9	1.1e-77	83.13	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX...	[more]
Q9FH13	1.8e-64	69.88	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX...	[more]
Q46ZV6	2.2e-49	53.46	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi...	[more]
A9AHQ6	4.9e-49	56.88	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans ...	[more]

BLAST of ClCG03G010660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4B6	3.8e-89	99.40	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B858	3.8e-89	99.40	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC1034872...	[more]
A0A6J1JHR3	6.5e-89	98.19	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0LXT5	8.5e-89	98.80	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_1G6...	[more]
A0A6J1H9P8	1.5e-88	97.59	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of ClCG03G010660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16450.1	1.1e-80	84.94	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G16450.2	1.1e-80	84.94	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT3G02770.1	7.9e-79	83.13	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G56260.1	1.3e-65	69.88	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 30..183 e-value: 5.8E-42 score: 143.4
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	CDD	cd16841	RraA_family	coord: 31..184 e-value: 3.83325E-55 score: 169.948
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 30..184 e-value: 8.6E-65 score: 215.1
None	No IPR available	GENE3D	3.50.30.40		coord: 27..190 e-value: 7.6E-48 score: 164.2
None	No IPR available	PANTHER	PTHR33254:SF20	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE	coord: 28..190
None	No IPR available	PANTHER	PTHR33254	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED	coord: 28..190
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	89562	RraA-like	coord: 28..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G010660.1	ClCG03G010660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0051252	regulation of RNA metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0047443	4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008948	oxaloacetate decarboxylase activity
molecular_function	GO:0008428	ribonuclease inhibitor activity