ClCG03G006590 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG03G006590
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionsignal recognition particle 14 kDa protein
LocationCG_Chr03: 7373295 .. 7380880 (-)
RNA-Seq ExpressionClCG03G006590
SyntenyClCG03G006590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTACACCCCTAGCGACTAGGAAGTCCAATTTTGTTAGCGAAAAAAGTATAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTGTCTACTCCGTTCAACGGACGTCGATCGGACCAGTTCCTCGTACTTCTCAAGATTCGCCCCACTCCTATCGCCATGGTAATTTCCTTTCTCTTCGTCTTACTCAGAACTCTTCTATATTTTCACGATACAATTGCGTCGATTAATGAGAACGCTGTCCTAATCTGCATTTTAATTATTCATCTTGATGTCACAATTTGACCTAATTAAACTGAGTTTTCGTGGGTCGGTGTTGGTTTTTGATGGTTCTTAGACAGCCAACTTGTTTTTGCTTCCGTTTGGATATATATATATATACATGTTTTTATTAGGATTTTGCTTGTTGATTATTGTAATTATGGGTTTGTCTTTTAATGTTCTGCATATGGATCAAATCCAAGTTTCTTGTTCTGCATTGCACATTTTCTCCAGTACCACAGCCACCACTCGGCTGGGTCTCCTTTTCATTTGGTGGCTTTCTATTTAAGATGAAAAAATTGGGCCTAGTAGTGTTTCTGAGCTTAAATATGATATAATGTCTAATTGCACGTTATTGGGTTTTCATTGGTTGATAGTCTTGGTGCGAATTCAATTCTGTTGCACGAAATTCAGTTCTCTCATTCAATTTGGCAAAGAGAATTGCCGAATTTGCCATGATCAGATTCTTCAATGGCATTTTAGGTCTGTAACAAACATCCAATCAATGGAATTATTCCCTTATGGGGGAAAGTAATCAAAGAATATATATCTAACAGCAGATGGTATTGGCTGAACTGAGATAGAAGGTTCAAGTGCTATGCACATCATTTGCGCCCTTGAACATTACACTCGCGCTTGAGTGTCTTTTGGCCAATTCGTATACATATGAGGCATGGTACTTTGATAAGTCCTTGAATAGCTAAACTATGAAAATGCGTAAATTATTTGGTATTTGAATCGTATCCCATAGTTTGTTATAAGTTCTAATTGGACTAGCTGTACCACCCTATGATTCTCTTGAAATTGCTTAGTTCACCTGTGCTTGTTTGCAGCTTTTGCATATTTTGCATTAGTCATACGAAGTTTTTTCTTCCAACATTTCCTCATGCGACCTAGTAAGTTTATCTACCAATGGTCCAAGAGATAGAATTTAGGATCTCTCTCCCTTGAGGCTTTATATATAGACTTAACTTTTCTGTTGTTAAATTTAATATGTATCGACCTAAGGATAAGTCCTGATGTTGGGGTGTTTTTGTTTTCAGCAACGTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAGTAAAGTTACCTTTCATTCAATTGAAAAGCCAGATTGACCTTTAGGGTTTGATGATCACTGACCGTACAAATTCTTTCTTCAAAAGGGAAGTGATCCCACTGTTTGTATGAGCTCACCAAGGCATACAGTTTTTGATGTTACGTCCTCCAACATTTTCTAGGCTTACTTAGCTTCTCAGTTCTCATTAAGCAAACCAAATTCAAAAAGTTTCTATCAAAGTGAGTTTAGCTCAACGCTAATTGGCATGGCCTTCCTCTCTAGAGGTTGGAGGTTCAATCCTCCATCCCTACAATTGTTGTACTAAAAAATATTCAAAAGTTTATGTTTTAAGGTTTCAAAGCCTTGCTGATGTATTCAACCTTGATGAAATTGTCCAGAAGAGCTCACTTATTGGACAAATGGAAGGAAAGAAATAACAGAATTTTCAATGACAAGTATATACCTATTGTGAATTTTGTGATCTTATTAAAAGAAATGTGTCACAACTAGAGTGGTTTACAGAAAGTGTTTTTAGGTGAGAGTACCTTACAGAAAGTGTTATTTTAGGTGATACATGCACACAGGTTTTTATAATTAATCCACTTGGTTTGTAATGAGGGTATTTCTTTTAATCTCCCATTTCAAGCAAGGAGATTTCACAAAGGCATCTCTCAACAAGTGGTGCCCGGTTTTATTTCCTTTGCCAATTCACCCATGTTATAGCTTGCTGTAGCAATCTCGTCTTTCAACTGGTTAAGGTATTATAACCTTGACAAAAAAAGTTAGAGTTTTGGATTCCCACTTCCACATATTCTTTACTCAAAAAAAGAAATAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

TTTACACCCCTAGCGACTAGGAAGTCCAATTTTGTTAGCGAAAAAAGTATAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTGTCTACTCCGTTCAACGGACGTCGATCGGACCAGTTCCTCGTACTTCTCAAGATTCGCCCCACTCCTATCGCCATGTCTTGGTGCGAATTCAATTCTGTTGCACGAAATTCAGTTCTCTCATTCAATTTGGCAAAGAGAATTGCCGAATTTGCCATGATCAGATTCTTCAATGGCATTTTAGATTCTACTTGGAAGTCATGTGTACAGACCAGGATGATGGTGCTTCCACATCACTTCGTTGTAGGATTAGCGGAAGATTTCACATTTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCATACTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCTTCACTGAAGTCCAAGGTGCAGAGAAATAAATTGACCACTGCTGGTGAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGAAAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATGAAAGGGGGCTGGCTCTCTTTGCTTCTAGGAAAGATTGGGAGAGGTGGGATTTTGGAATTTCAGGAATTGAAAAATACTTGATCTTGTCATTTGCTTAGCCATTTTTTTTCCCTTCAAAAAGATTTGAAATATACATGTGATTGTGGAATTGTCTGGAAGTTTTGCTTACTCTCTTCCTTGAAGCTATAAAACAACTTGACCTTGCTGAAAGTTGAAGGTGCAATCACGAGTTGATATTGGTTGTGAATCACCTTGGAACTTGTGGAAGAAAATTTCACCTGCTGATGTTCCTCCAATTTTCCACTTAAAAGATGAATTACTTTTGATACATTTAAGCAGAGAAT

Coding sequence (CDS)

TTTACACCCCTAGCGACTAGGAAGTCCAATTTTGTTAGCGAAAAAAGTATAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTGTCTACTCCGTTCAACGGACGTCGATCGGACCAGTTCCTCGTACTTCTCAAGATTCGCCCCACTCCTATCGCCATGTCTTGGTGCGAATTCAATTCTGTTGCACGAAATTCAGTTCTCTCATTCAATTTGGCAAAGAGAATTGCCGAATTTGCCATGATCAGATTCTTCAATGGCATTTTAGATTCTACTTGGAAGTCATGTGTACAGACCAGGATGATGGTGCTTCCACATCACTTCGTTGTAGGATTAGCGGAAGATTTCACATTTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCATACTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCTTCACTGAAGTCCAAGGTGCAGAGAAATAAATTGACCACTGCTGGTGAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGAAAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGACAAGAAGAAGGCACCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATGA

Protein sequence

FTPLATRKSNFVSEKSIIVFPLAVATALSTPFNGRRSDQFLVLLKIRPTPIAMSWCEFNSVARNSVLSFNLAKRIAEFAMIRFFNGILDSTWKSCVQTRMMVLPHHFVVGLAEDFTFIEDVLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATDGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV
Homology
[Close]
BLAST of ClCG03G006590 vs. NCBI nr
Match: KAG6583884.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225.7 bits (574), Expect = 4.2e-55
Identity = 135/219 (61.64%), Postives = 144/219 (65.75%), Query Frame = 0 

Query: 19  VFPLAVATALSTPFNGRRSDQFLVLLKIRPTPIAMSWCEFNSVARNSVLSFNLAKRIAEF 78
           VFPL+VAT  STP NGRRSDQ +VLLKI  T +A++                        
Sbjct: 21  VFPLSVATGSSTPLNGRRSDQDIVLLKIHTTAVAIA------------------------ 80

Query: 79  AMIRFFNGILDSTWKSCVQTRMMVLPHHFVVGLAEDFTFIEDVLLQLDPFLNELTSMFEH 138
                                                  I  VLLQLDPFLNELTSMFE 
Sbjct: 81  ---------------------------------------IAMVLLQLDPFLNELTSMFER 140

Query: 139 TTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATDGKKKISTSVGAKDHLRFQ 198
           +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRAT+GKK ISTSVGAKDHLRFQ
Sbjct: 141 STEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAKDHLRFQ 176

Query: 199 ASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           ASYSTILKAHMTALKKRERKDKKKA EAEKGLKKKPRKV
Sbjct: 201 ASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 176

[Close]
BLAST of ClCG03G006590 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-51
Identity = 116/132 (87.88%), Postives = 120/132 (90.91%), Query Frame = 0 

Query: 106 HFVVGLAEDFTFIEDVLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTT 165
           HF+V      T I  VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TT
Sbjct: 70  HFLVLFKIRSTSIAMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTT 129

Query: 166 AGEPIEYRCLIRATDGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPE 225
           AG+PIEYRCLIRATDGKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA E
Sbjct: 130 AGQPIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAE 189

Query: 226 AEKGLKKKPRKV 238
           AEKGLKKKPRKV
Sbjct: 190 AEKGLKKKPRKV 201

[Close]
BLAST of ClCG03G006590 vs. NCBI nr
Match: XP_038893990.1 (signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-51
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 118

[Close]
BLAST of ClCG03G006590 vs. NCBI nr
Match: XP_038893989.1 (signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-51
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 9   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 68

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV
Sbjct: 69  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 125

[Close]
BLAST of ClCG03G006590 vs. NCBI nr
Match: KAG7019502.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 212.2 bits (539), Expect = 4.8e-51
Identity = 114/129 (88.37%), Postives = 120/129 (93.02%), Query Frame = 0 

Query: 109 VGLAEDFTFIEDVLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGE 168
           +GLA   ++   VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+
Sbjct: 8   MGLAYASSYRPMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQ 67

Query: 169 PIEYRCLIRATDGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEK 228
           PIEYRCLIRATDGKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA EAEK
Sbjct: 68  PIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 127

Query: 229 GLKKKPRKV 238
           GLKKKPRKV
Sbjct: 128 GLKKKPRKV 136

[Close]
BLAST of ClCG03G006590 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE + EKGSVWVTLKRSSLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEK 229
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of ClCG03G006590 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35
Identity = 77/116 (66.38%), Postives = 97/116 (83.62%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           V+LQ DPFL+ELTSM+E +TEKGSVWVT+KRSS+K + +  K+   GE +EYRCL+RATD
Sbjct: 2   VVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRK 237
           GKK I T++ AK++L+FQASY+T+LKAHM ALKKRERKDKKKA E EK  +K P+K
Sbjct: 62  GKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAEVEKIPEKAPKK 117

[Close]
BLAST of ClCG03G006590 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAG-EPIEYRCLIRAT 180
           VLL+ + FL ELT +F+     GSV++TLK+   ++K    K T  G EP + +CL+RAT
Sbjct: 2   VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRAT 61

Query: 181 DGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEA 227
           DGKKKIST V +K+  +FQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 62  DGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of ClCG03G006590 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAG-EPIEYRCLIRAT 180
           VLL+ + FL ELT +F+     GSV++TLK+   ++K    K T  G EP + +CL+RAT
Sbjct: 2   VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRAT 61

Query: 181 DGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEA 227
           DGKKKIST V +K+  +FQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 62  DGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of ClCG03G006590 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAG-EPIEYRCLIRAT 180
           VLL+ + FL ELT +F+     GSV++TLK+   ++K    K T  G EP + +CL+RAT
Sbjct: 2   VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRAT 61

Query: 181 DGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEA 227
           DGKKKIST V +K+  +FQ +YS +L+A+M  LKKR++K+K K  +A
Sbjct: 62  DGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of ClCG03G006590 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of ClCG03G006590 vs. ExPASy TrEMBL
Match: A0A5A7UG42 (Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00850 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 7   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 66

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA EAEKGLKKKPRKV
Sbjct: 67  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 123

[Close]
BLAST of ClCG03G006590 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of ClCG03G006590 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of ClCG03G006590 vs. ExPASy TrEMBL
Match: A0A6J1EG32 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434001 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 5.7e-50
Identity = 110/117 (94.02%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRAT+
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATN 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 238
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of ClCG03G006590 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE + EKGSVWVTLKRSSLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEK 229
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of ClCG03G006590 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44
Identity = 92/108 (85.19%), Postives = 100/108 (92.59%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE + EKGSVWVTLKRSSLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEK 229
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of ClCG03G006590 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-36
Identity = 82/108 (75.93%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 121 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 180
           VLLQLDPFLNELTSMFE + EK         +SLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEK---------ASLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 181 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEK 229
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERKD+KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 100

The following BLAST results are available for this feature:
BLAST of ClCG03G006590 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583884.14.2e-5561.64Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs... [more]
KGN66307.21.6e-5187.88hypothetical protein Csa_023187 [Cucumis sativus][more]
XP_038893990.13.7e-5195.73signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida][more]
XP_038893989.13.7e-5195.73signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida][more]
KAG7019502.14.8e-5188.37Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs... [more]
BLAST of ClCG03G006590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O044211.7e-4385.19Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
O044332.2e-3566.38Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
P371081.6e-1747.66Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1... [more]
Q4R5C71.6e-1747.66Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP... [more]
Q5RBX71.6e-1747.66Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2... [more]
BLAST of ClCG03G006590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KGP71.5e-5094.87signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A5A7UG421.5e-5094.87Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=119469... [more]
A0A0A0LYE01.5e-5094.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1[more]
A0A1S3BBI81.5e-5094.87signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878... [more]
A0A6J1EG325.7e-5094.02signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata... [more]
BLAST of ClCG03G006590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43640.11.2e-4485.19Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.21.2e-4485.19Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.32.1e-3675.93Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003210Signal recognition particle, SRP14 subunitPFAMPF02290SRP14coord: 123..212
e-value: 3.5E-22
score: 78.8
IPR003210Signal recognition particle, SRP14 subunitPANTHERPTHR12013SIGNAL RECOGNITION PARTICLE 14 KD PROTEINcoord: 81..228
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 121..237
e-value: 2.0E-38
score: 133.9
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 121..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..237
NoneNo IPR availablePANTHERPTHR12013:SF3SUBFAMILY NOT NAMEDcoord: 81..228

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG03G006590.1ClCG03G006590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G protein-coupled receptor signaling pathway
biological_process GO:0006457 protein folding
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding