ClCG03G004550 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCCATTGACTCGAAAGCCTTCTTCTTCTCCTCCTTCTTCTTCACCCAATAAGCCCACCCTTCACCCTCTTGACCCCAAGGTTGTTAGGTGGTCGGCGTCGGTTACCGGTGGTGATTCCGATGGCAGAGAGAACCAGAATGGGATCAACAATGACAATGAGTTTGAGGCGGGTGAGTCGCCGGCGCAAGGAGATGAGGAAAATCAGCAGCAGCTTGTAATTAGTACTAAAACGCCAGAACACAAGACTGATAGCTGGGCTAGATCCAAACTCCGCAGCTTCAACTTTTCTTGTAAGTCTTCTGTTTTCTTTTTCTTTTTCTTTTCTTTTCCTATAATTTTTTCTGTTAACATTTTTCTTTTTTCTTTCTTTTTTTTTTCTTTTGGACACACTAAGCATAAATACTTAAATCTATATTGAATATATTAACCTTAGGATCATTCATGTCAAATTATCTAGAATAAATAAGATACCGAATTCCATTGAGAGATTGATGATAGTTACAAAATGACTATTATCTTCTTCAACCAAAATTTTGTATGTCTTTAGTAGGATCTCCGTTTACATGAGATTAGAAAGATTGGGTGTGTATTGTTTTAATATATAAGTGACCATAGACTCTCTTTATATACTAGTTTAATTAGGATTCCATTATACACTAATTAACTATGAATGAGCTTCTATCCATTCAGTTCATACTCAATTGGGAAACTAAGATCTTAATTAAATCACATAATAGAGTTCAATCTAATAAAATAACCAATGTGATAAAATACTAATTCACATACATAGCCCATACTTTAATTATATCTAATTGCTTAGCAAATTTGTTTCAATAATTCAGGTGGATCGAGAAAAATATATTTGACCAAACCAACAAATTGTGTCATGAAAACATATATTTTTGTGTTTTTAAATTGAAGAATCCCTTTAGCTCTTCAAATCTACAAATTTTACATTCTTACGATGAAAGTGAAATGGAGAAGAAAAAAATAAAGAATAAGGAGTAATCGACCCAAAAATTTACGTGGTATACTAATAGTGTGTTAGCTGTGTCTATCAATAGAAGAAGAGAGTAAAAAAAATATATCAAATAGACGTTAACAAGATTGGAGGGTTTTACATATAATACCCCACTAAACTTTGGCCCCAAAATCATATATAACATATTAGGCATATACACAACACACACATTACACACATTGGCAAGATTATTTGCCTATATTATTTTTATTGTCAGCGATAATCCTCAACTCATAGAAACTATAGCTCACTCCATCATAAAAGTAACCCACTTAGGACAACGATGATGCATTCCAAAAATTTACTTCACACGTTAACAAACTCTGTTGAAACTTTTGGTGCAACTCTTAAAAAGGTTAATTAAGAGTAGTTGTTTGCTGATTAGGGAGAAGAAGTAGAATGAACAGTAGTCGTTCACTTCGTGCTAAGATTCATCAAGCTGCATTAAAAGGGGACTAG ATGATGCCATTGACTCGAAAGCCTTCTTCTTCTCCTCCTTCTTCTTCACCCAATAAGCCCACCCTTCACCCTCTTGACCCCAAGGTTGTTAGGTGGTCGGCGTCGGTTACCGGTGGTGATTCCGATGGCAGAGAGAACCAGAATGGGATCAACAATGACAATGAGTTTGAGGCGGGTGAGTCGCCGGCGCAAGGAGATGAGGAAAATCAGCAGCAGCTTGTAATTAGTACTAAAACGCCAGAACACAAGACTGATAGCTGGGCTAGATCCAAACTCCGCAGCTTCAACTTTTCTTGGAGAAGAAGTAGAATGAACAGTAGTCGTTCACTTCGTGCTAAGATTCATCAAGCTGCATTAAAAGGGGACTAG ATGATGCCATTGACTCGAAAGCCTTCTTCTTCTCCTCCTTCTTCTTCACCCAATAAGCCCACCCTTCACCCTCTTGACCCCAAGGTTGTTAGGTGGTCGGCGTCGGTTACCGGTGGTGATTCCGATGGCAGAGAGAACCAGAATGGGATCAACAATGACAATGAGTTTGAGGCGGGTGAGTCGCCGGCGCAAGGAGATGAGGAAAATCAGCAGCAGCTTGTAATTAGTACTAAAACGCCAGAACACAAGACTGATAGCTGGGCTAGATCCAAACTCCGCAGCTTCAACTTTTCTTGGAGAAGAAGTAGAATGAACAGTAGTCGTTCACTTCGTGCTAAGATTCATCAAGCTGCATTAAAAGGGGACTAG MMPLTRKPSSSPPSSSPNKPTLHPLDPKVVRWSASVTGGDSDGRENQNGINNDNEFEAGESPAQGDEENQQQLVISTKTPEHKTDSWARSKLRSFNFSWRRSRMNSSRSLRAKIHQAALKGD Homology
BLAST of ClCG03G004550 vs. NCBI nr
Match: XP_022137142.1 (ankyrin repeat-containing protein NPR4-like [Momordica charantia]) HSP 1 Score: 89.0 bits (219), Expect = 3.1e-14 Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG03G004550 vs. NCBI nr
Match: XP_022994352.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita maxima]) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11 Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 0
BLAST of ClCG03G004550 vs. ExPASy TrEMBL
Match: A0A0A0LUR7 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G059760 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27 Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of ClCG03G004550 vs. ExPASy TrEMBL
Match: A0A6J1C7F7 (ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LOC111008689 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14 Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of ClCG03G004550 vs. ExPASy TrEMBL
Match: A0A6J1JVK1 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita maxima OX=3661 GN=LOC111490098 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.1e-12 Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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