ClCG03G001780 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG03G001780
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	CCT domain-containing protein
Location	CG_Chr03: 1880055 .. 1882777 (-)
RNA-Seq Expression	ClCG03G001780
Synteny	ClCG03G001780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGGCTTCTCCCCGGCCACGGCCACTGCCACCGTCACCCCCGACGCCTCTCTCTGCCACCTCCACTCCCCCGACCTCGCTGTGTCACCACCACTTTTCCCATCCTTCCCTAACTTCTTGTCTTCTCATTCCTCTTCCTCCTCCTTGCTCTTAACGTATAGCCAGCTCTCTCTCGGGAGCGAGCTGGACTCGGTGCTCGAGCCACCGAGTTTTTTACCTTCGGAGGTCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACGTCGCAGCCTGCCCTAATACAGCGGAGCATGAGTAGCCACTCGCTCCAAAAGAATAGGGTAAGCTACGGACCAGGCGTTGCGATCTCCTCATTCTTCGACGTGGAGGTGCCGGCCGTTAGAAGGGTTTACAGCTCCGGCGACTTGCAGGTGAGTTTTGCTAGCTCCTCAAAACTGGCTGCAAAATGCTAGCCTTTTGTTTGCAAAATATAGTTTCATTATTCTTTCACACTTAAAACCTTGTATCTTAACAATTATTCTTTTTGAAAATCTATTTGTAAAAAATAAAGAAATAAAAGTGACCAATTTTTGTCTATGCTTTTGTTTCTCAAAAGTTGCTTCCAACTTAGGTTGGGCACCTTCATGTCTTTATAAAATCATAGTCAAACACCAATTATTTATCCCACATTTATTAAATAATTTTACAATAGTAGCTAATATATTTTGAAATCTATTTATTTTTCCATTAAGTTTAAATCATATATTTGAATATTAAGTAAAATTGATGATGGAAATAATCAGGGAAGAACAGAAAGGGGATGCTCGAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTCGGTATAGTCCTGAAGAGAAGAGAGAGAGAATTGAGAGATATAAAACCAAAAGAAACCAGAGGAATTTTAATAAGAAGATTAAGGTAATTATTTATTTATTATTATTATTATTATTATTATTATTATTTCTTGTTTGTGTCTTTTAACTTTTTTAACTTTGTGTCTAATAAGTCTATGATGGGTTTTAAAACCATCAAATAGATTCATTAACTTTTTTAGATTTATTTAAACATATTCATTTGTAAGACGAATCAATGTATTCTAAAAGAAGAAAAAAAATTGAATTTTATGTTTAATAAGACATTAATATTTTAATGTTGTGTCCAACAAGTTCGTAAAATTTTAAAATATTGAATATGTTAATGACCTATTATAATAAATACAAAATCAAAAGTTTAAAGGGCTCAACCACACATTTTAAACTTTAAATACCTATTAGACAGAGAAAATTGAGAATTTATTAACCTATTATTAGACTCAAAATTGAAAGTGTACAAGTATATTATAAACGTTTTAAAGTTTATGAATATATTTAACACAAAATTAAAAATTTAGAGACGTAATTTTAAATTATAACCAAATAATATCACTTAATTCCTTCCATGTTTTCTTTTATCTATTCTACATTCTTTTGTTAAATTATTACGACGACAAACTCATAAATTATAATTGGGATTATTATCGTAACATATATTCATTATTGTAGGATCGACGTACGTGTACAAAGGAAAATCCATCAAAATTTCACTTGAGCTTACTATATATGGAGGCAAATAATTAGTGTTTTTTTTTTTTCTTTTTCTACATGAATAATGATTTAGAGAGAGAAGAAATAAGGACAAGACACATTTAAAATAATTGTGTCATATTGGAAGTTAAAGACAAAGTGGAGTAAAAAATGATTGTGGATAGAGTTACTATTCATATGTAGCTAGCAACAGTGATATGTTATTTTTCTACTCCAATCAAATTTTTATGGGATTTTTCTTCAATATTATTCTCCTTTTTTAAATAAAGTTGTTTAAAATAAAACTAAAATATTTGAAATTATAGGATGTCTCAACTCACACATGTTTATTAAATTAGGTCTTTAGATTTTAAAAAGTATCGAATATAATAGGTCGCTTAAAATTTTTATATTTGTCCCTAGCTTAATAGGTTCCTGAATTTTAAAAATATTTAATTAGCCTCAAATTTTTGATTTTCTATAGAATAAGTCCTCAAGCTTCAAAATTTATGAACCTATTAGATAGAAAATTCAATTTTATCCGTTATACATTCATTTATTTTATATAATATTAATATGTATTAGACACAAAATGAGAATTTAGAAAATTATTTGATATTTTCAATAAGTTATTCGTAACAAATACATAATTGAAAGTTATACATAGTAAATACATATATGTTTTTTACAATTTAAAGACCTATTGGATCCAAACATGAAAGTTATGAACTAAACTTGTAATTTAAGTGTAATTTTTATGTATATTTTGATAATCAATCTGTTTAGTGAAATAATTTTGGTTGGATTGACAAGCAAATTACAAGTAAAACTAAATGTTTTTTTCACTTGTATACTCACCTTATTTTATCTAGTTGTGTTACATTATACTAAATTATCACTCCTTAATCTAATCATTGCTATGTAATCTGATAGTATGAGTGCAGGAAAACATTGGCAGATAGTAGAAAGCGAATAAGAGGAAGATTTGCAAGAAATGAAGAAATTGAAAATAGTAACTCCACCAGCTCGCCTATAGAAACATGGAGCTGCTATGACAATGCCATGGTGGAGGAAGACACCCAAGACGATGGCTCATGGATCACCTTCCTTGACTCTTACTCTGTTAATTAG

mRNA sequence

ATGCACGGCTTCTCCCCGGCCACGGCCACTGCCACCGTCACCCCCGACGCCTCTCTCTGCCACCTCCACTCCCCCGACCTCGCTGTGTCACCACCACTTTTCCCATCCTTCCCTAACTTCTTGTCTTCTCATTCCTCTTCCTCCTCCTTGCTCTTAACGTATAGCCAGCTCTCTCTCGGGAGCGAGCTGGACTCGGTGCTCGAGCCACCGAGTTTTTTACCTTCGGAGGTCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACGTCGCAGCCTGCCCTAATACAGCGGAGCATGAGTAGCCACTCGCTCCAAAAGAATAGGGTAAGCTACGGACCAGGCGTTGCGATCTCCTCATTCTTCGACGTGGAGGTGCCGGCCGTTAGAAGGGTTTACAGCTCCGGCGACTTGCAGGGAAGAACAGAAAGGGGATGCTCGAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTCGGTATAGTCCTGAAGAGAAGAGAGAGAGAATTGAGAGATATAAAACCAAAAGAAACCAGAGGAATTTTAATAAGAAGATTAAGTATGAGTGCAGGAAAACATTGGCAGATAGTAGAAAGCGAATAAGAGGAAGATTTGCAAGAAATGAAGAAATTGAAAATAGTAACTCCACCAGCTCGCCTATAGAAACATGGAGCTGCTATGACAATGCCATGGTGGAGGAAGACACCCAAGACGATGGCTCATGGATCACCTTCCTTGACTCTTACTCTGTTAATTAG

Coding sequence (CDS)

ATGCACGGCTTCTCCCCGGCCACGGCCACTGCCACCGTCACCCCCGACGCCTCTCTCTGCCACCTCCACTCCCCCGACCTCGCTGTGTCACCACCACTTTTCCCATCCTTCCCTAACTTCTTGTCTTCTCATTCCTCTTCCTCCTCCTTGCTCTTAACGTATAGCCAGCTCTCTCTCGGGAGCGAGCTGGACTCGGTGCTCGAGCCACCGAGTTTTTTACCTTCGGAGGTCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACGTCGCAGCCTGCCCTAATACAGCGGAGCATGAGTAGCCACTCGCTCCAAAAGAATAGGGTAAGCTACGGACCAGGCGTTGCGATCTCCTCATTCTTCGACGTGGAGGTGCCGGCCGTTAGAAGGGTTTACAGCTCCGGCGACTTGCAGGGAAGAACAGAAAGGGGATGCTCGAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTCGGTATAGTCCTGAAGAGAAGAGAGAGAGAATTGAGAGATATAAAACCAAAAGAAACCAGAGGAATTTTAATAAGAAGATTAAGTATGAGTGCAGGAAAACATTGGCAGATAGTAGAAAGCGAATAAGAGGAAGATTTGCAAGAAATGAAGAAATTGAAAATAGTAACTCCACCAGCTCGCCTATAGAAACATGGAGCTGCTATGACAATGCCATGGTGGAGGAAGACACCCAAGACGATGGCTCATGGATCACCTTCCTTGACTCTTACTCTGTTAATTAG

Protein sequence

MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLGSELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVAISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEEDTQDDGSWITFLDSYSVN

Homology

[Close]

BLAST of ClCG03G001780 vs. NCBI nr
Match: XP_038895146.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 419.9 bits (1078), Expect = 1.6e-113
Identity = 224/257 (87.16%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FS  T T T+T DASLCHLHSPD AVSPPLFPSFPNF SSH+SSSSLL TYSQL   
Sbjct: 1   MHTFS--TVTGTITADASLCHLHSPDHAVSPPLFPSFPNFFSSHTSSSSLLPTYSQL--- 60

Query: 61  SELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVA 120
           SELD VLE   FLPSEVSYSGSSGPCSSYGSPTSQPALI RSMSSHSLQKNRVS+GPG  
Sbjct: 61  SELDLVLESSGFLPSEVSYSGSSGPCSSYGSPTSQPALIHRSMSSHSLQKNRVSHGPGAR 120

Query: 121 ISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKT 180
            SS FD + PAVRRVYSSGDLQGRTERGCSSESSLIIE MTKACRYSPEEKRERIERYKT
Sbjct: 121 SSSLFDADGPAVRRVYSSGDLQGRTERGCSSESSLIIERMTKACRYSPEEKRERIERYKT 180

Query: 181 KRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEED 240
           KRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEE ENSNSTSSP+ETWS YDNAMVEED
Sbjct: 181 KRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEETENSNSTSSPVETWSYYDNAMVEED 240

Query: 241 TQDDGSWITFLDSYSVN 258
           TQDDGSWITFL SYSVN
Sbjct: 241 TQDDGSWITFLGSYSVN 252

[Close]

BLAST of ClCG03G001780 vs. NCBI nr
Match: XP_011657991.1 (two-component response regulator-like APRR9 isoform X1 [Cucumis sativus] >KGN65685.1 hypothetical protein Csa_020089 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 5.5e-101
Identity = 208/257 (80.93%), Postives = 219/257 (85.21%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FSPA        D S+ HLHSPDL VSPPLFPSFPNF SSH  SSS LL YSQL+  
Sbjct: 1   MHSFSPAV-------DTSIFHLHSPDLIVSPPLFPSFPNFSSSH--SSSFLLAYSQLA-- 60

Query: 61  SELDSVLEPPSFLPSEV-SYSGSSGPCSSYGSPT-SQPALIQRSMSSHSLQKNRVSYGPG 120
             L+ VLE P  LPSEV SYSGSSGPCSSYGSPT SQP+LIQRSMSS SLQK+RV +GPG
Sbjct: 61  --LNPVLESPELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPG 120

Query: 121 VAISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERY 180
             ISS  D ++PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERY
Sbjct: 121 ARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERY 180

Query: 181 KTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVE 240
           KTKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEEIEN NSTSSP+E WSCY+N MVE
Sbjct: 181 KTKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENGNSTSSPLEAWSCYENPMVE 240

Query: 241 EDT-QDDGSWITFLDSY 255
           EDT QDDGSWITFLDSY
Sbjct: 241 EDTVQDDGSWITFLDSY 244

[Close]

BLAST of ClCG03G001780 vs. NCBI nr
Match: XP_008457517.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo])

HSP 1 Score: 369.8 bits (948), Expect = 1.9e-98
Identity = 207/260 (79.62%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAV--SPPLFPSFPNFLSSHSSSSSLLLTYSQLS 60
           MH FSPA        D S+ HLHSPDL V  SPPLFPSFPNF SSH  SSS LL YSQL+
Sbjct: 1   MHSFSPAV-------DTSIFHLHSPDLIVSSSPPLFPSFPNFSSSH--SSSFLLAYSQLA 60

Query: 61  LGSELDSVLEPPSFLPSEV-SYSGSSGPCSSYGSPT-SQPALIQRSMSSHSLQKNRVSYG 120
               LD VLE P  LP EV SYSGSSGPCSSYGSPT SQPALIQRSMSS SLQK+RV +G
Sbjct: 61  ----LDPVLESPDLLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHG 120

Query: 121 PGVAISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIE 180
           PG  ISS  D ++PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEK+ERIE
Sbjct: 121 PGARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIE 180

Query: 181 RYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAM 240
           RYK+KRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEEIENSNSTSSP+E WSCYDN M
Sbjct: 181 RYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPM 240

Query: 241 VEE--DTQDDGSWITFLDSY 255
           V+E   TQDDGSWITFLDSY
Sbjct: 241 VKELDTTQDDGSWITFLDSY 247

[Close]

BLAST of ClCG03G001780 vs. NCBI nr
Match: XP_022970463.1 (zinc finger protein CONSTANS-LIKE 5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 315.1 bits (806), Expect = 5.7e-82
Identity = 182/258 (70.54%), Postives = 197/258 (76.36%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FS AT       +ASLCHL +PDLAVSPPL  SFP+F+SSHSS            L 
Sbjct: 1   MHAFSSATL------EASLCHLPTPDLAVSPPLLASFPHFISSHSS-----------LLA 60

Query: 61  SELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVA 120
           SEL  +LEP   LPSE+SYS SSGPCSSY SPTS+P   QRSM          S+GPGV 
Sbjct: 61  SELAPMLEPSGLLPSELSYSCSSGPCSSYESPTSKP---QRSM----------SHGPGVQ 120

Query: 121 ISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGM-TKACRYSPEEKRERIERYK 180
           IS  FD+E  +VRR Y S DLQGRTE   S+ESSLIIEGM TKACRYSPEEKR+RIE+YK
Sbjct: 121 ISMLFDLE-SSVRRAYRSNDLQGRTEMTNSNESSLIIEGMSTKACRYSPEEKRQRIEKYK 180

Query: 181 TKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEE 240
           TKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEE+ENSNSTSSP ETWSCYDNA  EE
Sbjct: 181 TKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATTEE 227

Query: 241 DTQDDGSWITFLDSYSVN 258
           D QDDGSWITFLDSYSVN
Sbjct: 241 DGQDDGSWITFLDSYSVN 227

[Close]

BLAST of ClCG03G001780 vs. NCBI nr
Match: KAG7019213.1 (Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.8 bits (800), Expect = 2.8e-81
Identity = 181/258 (70.16%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FS AT       +ASLCHL +PDLA+SPPL  SFP+F+SSHSSS S L       L 
Sbjct: 1   MHAFSSATL------EASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSL-------LA 60

Query: 61  SELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVA 120
           S+L  +LE P  LPSE+SYS SSGPCSSYGSPTS+P   QRSM           + P V 
Sbjct: 61  SDLVPMLESPGLLPSELSYSCSSGPCSSYGSPTSKP---QRSM----------RHRPNVQ 120

Query: 121 ISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGM-TKACRYSPEEKRERIERYK 180
           IS+ FD+E  +VRR YS  DLQGRTE   SSESSLIIEGM TKACRYSPEEKR+RIE+YK
Sbjct: 121 ISTLFDLE-SSVRRAYSFNDLQGRTEMASSSESSLIIEGMSTKACRYSPEEKRQRIEKYK 180

Query: 181 TKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEE 240
           TKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEE+ENSNSTSSP ETWSCYDNA  EE
Sbjct: 181 TKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATAEE 231

Query: 241 DTQDDGSWITFLDSYSVN 258
             QDDGSWITFLDSYSVN
Sbjct: 241 VGQDDGSWITFLDSYSVN 231

[Close]

BLAST of ClCG03G001780 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.4e-04
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 161 TKACRYSPEEKRERIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEE 216
           T A + SP E+  R+ RY+ KR  R F K I+Y  RK  A+ R RI+GRFA+  +
Sbjct: 219 TPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

[Close]

BLAST of ClCG03G001780 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.4e-04
Identity = 25/54 (46.30%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 167 SPEEKRERIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSN 221
           S  ++  R+ RY+ KR  R F K I+Y  RK  A+SR RI+GRFA+  E EN +
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDD 334

[Close]

BLAST of ClCG03G001780 vs. ExPASy TrEMBL
Match: A0A0A0LUR6 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G497300 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.6e-101
Identity = 208/257 (80.93%), Postives = 219/257 (85.21%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FSPA        D S+ HLHSPDL VSPPLFPSFPNF SSH  SSS LL YSQL+  
Sbjct: 1   MHSFSPAV-------DTSIFHLHSPDLIVSPPLFPSFPNFSSSH--SSSFLLAYSQLA-- 60

Query: 61  SELDSVLEPPSFLPSEV-SYSGSSGPCSSYGSPT-SQPALIQRSMSSHSLQKNRVSYGPG 120
             L+ VLE P  LPSEV SYSGSSGPCSSYGSPT SQP+LIQRSMSS SLQK+RV +GPG
Sbjct: 61  --LNPVLESPELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPG 120

Query: 121 VAISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERY 180
             ISS  D ++PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERY
Sbjct: 121 ARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERY 180

Query: 181 KTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVE 240
           KTKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEEIEN NSTSSP+E WSCY+N MVE
Sbjct: 181 KTKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENGNSTSSPLEAWSCYENPMVE 240

Query: 241 EDT-QDDGSWITFLDSY 255
           EDT QDDGSWITFLDSY
Sbjct: 241 EDTVQDDGSWITFLDSY 244

[Close]

BLAST of ClCG03G001780 vs. ExPASy TrEMBL
Match: A0A1S3C703 (zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC103497191 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.4e-99
Identity = 207/260 (79.62%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAV--SPPLFPSFPNFLSSHSSSSSLLLTYSQLS 60
           MH FSPA        D S+ HLHSPDL V  SPPLFPSFPNF SSH  SSS LL YSQL+
Sbjct: 1   MHSFSPAV-------DTSIFHLHSPDLIVSSSPPLFPSFPNFSSSH--SSSFLLAYSQLA 60

Query: 61  LGSELDSVLEPPSFLPSEV-SYSGSSGPCSSYGSPT-SQPALIQRSMSSHSLQKNRVSYG 120
               LD VLE P  LP EV SYSGSSGPCSSYGSPT SQPALIQRSMSS SLQK+RV +G
Sbjct: 61  ----LDPVLESPDLLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHG 120

Query: 121 PGVAISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIE 180
           PG  ISS  D ++PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEK+ERIE
Sbjct: 121 PGARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIE 180

Query: 181 RYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAM 240
           RYK+KRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEEIENSNSTSSP+E WSCYDN M
Sbjct: 181 RYKSKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEIENSNSTSSPLEAWSCYDNPM 240

Query: 241 VEE--DTQDDGSWITFLDSY 255
           V+E   TQDDGSWITFLDSY
Sbjct: 241 VKELDTTQDDGSWITFLDSY 247

[Close]

BLAST of ClCG03G001780 vs. ExPASy TrEMBL
Match: A0A6J1I3X3 (zinc finger protein CONSTANS-LIKE 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469436 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.7e-82
Identity = 182/258 (70.54%), Postives = 197/258 (76.36%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FS AT       +ASLCHL +PDLAVSPPL  SFP+F+SSHSS            L 
Sbjct: 1   MHAFSSATL------EASLCHLPTPDLAVSPPLLASFPHFISSHSS-----------LLA 60

Query: 61  SELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVA 120
           SEL  +LEP   LPSE+SYS SSGPCSSY SPTS+P   QRSM          S+GPGV 
Sbjct: 61  SELAPMLEPSGLLPSELSYSCSSGPCSSYESPTSKP---QRSM----------SHGPGVQ 120

Query: 121 ISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGM-TKACRYSPEEKRERIERYK 180
           IS  FD+E  +VRR Y S DLQGRTE   S+ESSLIIEGM TKACRYSPEEKR+RIE+YK
Sbjct: 121 ISMLFDLE-SSVRRAYRSNDLQGRTEMTNSNESSLIIEGMSTKACRYSPEEKRQRIEKYK 180

Query: 181 TKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEE 240
           TKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEE+ENSNSTSSP ETWSCYDNA  EE
Sbjct: 181 TKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATTEE 227

Query: 241 DTQDDGSWITFLDSYSVN 258
           D QDDGSWITFLDSYSVN
Sbjct: 241 DGQDDGSWITFLDSYSVN 227

[Close]

BLAST of ClCG03G001780 vs. ExPASy TrEMBL
Match: A0A6J1HLZ0 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464822 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.8e-81
Identity = 180/257 (70.04%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLG 60
           MH FS AT       +ASLCHL +PDLA+SPPL  SFP+F+SSHSSS S L       L 
Sbjct: 1   MHAFSSATL------EASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSL-------LA 60

Query: 61  SELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVA 120
           S+L  +LE P  LPSE+SYS SSGPCSSYGSPTS+P   QRSM           + P V 
Sbjct: 61  SDLVPMLESPGLLPSELSYSCSSGPCSSYGSPTSKP---QRSM----------RHRPNVQ 120

Query: 121 ISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGM-TKACRYSPEEKRERIERYK 180
           IS+ FD+E  +VRR YS  DLQGRTE   SSESSLIIEGM TKACRYSPEEKR+RIE+YK
Sbjct: 121 ISTLFDLE-SSVRRAYSFNDLQGRTEMASSSESSLIIEGMSTKACRYSPEEKRQRIEKYK 180

Query: 181 TKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEE 240
           TKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEE+ENSNSTSSP ETWSCYDNA  EE
Sbjct: 181 TKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEEVENSNSTSSPTETWSCYDNATAEE 230

Query: 241 DTQDDGSWITFLDSYSV 257
             QDDGSWITFLDSYSV
Sbjct: 241 VGQDDGSWITFLDSYSV 230

[Close]

BLAST of ClCG03G001780 vs. ExPASy TrEMBL
Match: A0A6J1DVX1 (uncharacterized protein LOC111023585 OS=Momordica charantia OX=3673 GN=LOC111023585 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.4e-72
Identity = 169/258 (65.50%), Postives = 184/258 (71.32%), Query Frame = 0


Query: 1   MHGFSPATATATVTPDASLCHLHSPDLAVSP-PLFPSFPNFLSSHSSSSSLLLTYSQLSL 60
           MHG S           A+LCHLHSPD+A+SP P FPS PNF  SH S S  L  Y QL L
Sbjct: 1   MHGLSA----------AALCHLHSPDIAISPLPPFPSLPNFSLSHYSPSP-LSAYCQL-L 60

Query: 61  GSELDSVLEPPSFLPSEVSYSGSSGPCSSYGSPTSQPALIQRSMSSHSLQKNRVSYGPGV 120
             +LDSV E    L SEVSYSGSSGPCSS GSPTSQP LIQRS+SSH L     + GP  
Sbjct: 61  RCQLDSVPESEGLLNSEVSYSGSSGPCSSNGSPTSQPGLIQRSLSSHGLDLQLSALGP-- 120

Query: 121 AISSFFDVEVPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYK 180
                       VRRV+S+GDLQGR ERG SSESSLIIEGM KACRYSPEEKRERIERYK
Sbjct: 121 ------------VRRVHSAGDLQGRAERGWSSESSLIIEGMAKACRYSPEEKRERIERYK 180

Query: 181 TKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEE 240
           TKRNQRNFNKKIKYECRKTLADSR+RIRGRFARNEE E+ N T+SP+E+WS         
Sbjct: 181 TKRNQRNFNKKIKYECRKTLADSRRRIRGRFARNEETEHKNFTTSPVESWSYATG----- 225

Query: 241 DTQDDGSWITFLDSYSVN 258
             +DDGSWI+FLDS SVN
Sbjct: 241 --EDDGSWISFLDSCSVN 225

[Close]

BLAST of ClCG03G001780 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 102/254 (40.16%), Postives = 136/254 (53.54%), Query Frame = 0


Query: 9   ATATVTPDASLCHLHSPDLAVSPPLFPSFPNFLSSHSSSSSLLLTYSQLSLGSELDSVLE 68
           +T+  + D   C L+S D+   P L     +           LL  SQ SL +     + 
Sbjct: 6   STSITSGDNCPCFLYSDDIVAPPQLLDHHHH---QFPPPPLALLMMSQNSLYAA--EAVS 65

Query: 69  PPSFLPSEVSYSGSSGPCSSYGSPTS--QPALIQRSMSSHSLQKNRVSYGPGVAISSFFD 128
              +  S ++  G S  C S  S  S  +  ++QRS+SSH    N  S G   A   F +
Sbjct: 66  GFGYFDSGMNGGGGSSSCDSPSSMGSGGESLVMQRSVSSH----NGFS-GNYTAAHDFVN 125

Query: 129 VEVPAVRRVYSSGDLQGRTERGCS---SESSLIIEGMTKACRYSPEEKRERIERYKTKRN 188
            +   VRR  S+GDL   + R  S   SES+ IIEGM+KA +YSPEEK+E+IE+Y++KRN
Sbjct: 126 DDDGPVRRALSAGDLPRSSRRESSTVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRN 185

Query: 189 QRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSNSTSSPIETWSCYDNAMVEEDTQD 248
            RNFNK+IKYECRKTLADSR RIRGRFARN+EI                   ++E    D
Sbjct: 186 LRNFNKRIKYECRKTLADSRPRIRGRFARNDEISQQEQVD------------VMEAVVGD 237

Query: 249 DGSWITFLDSYSVN 258
             +W +FLDS+S N
Sbjct: 246 VDTWASFLDSFSAN 237

[Close]

BLAST of ClCG03G001780 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-20
Identity = 68/158 (43.04%), Postives = 91/158 (57.59%), Query Frame = 0


Query: 88  SYGSPTSQPALIQRSMSSHSLQKNRVSYGPGVAIS-----SFFDVEVP-------AVRRV 147
           SY +  +    +QRS SS+S++  +      + +      S+ ++  P        +RRV
Sbjct: 117 SYSTIENSGRYMQRSFSSNSVEGKQTQVPFNIPMMDSSNLSYNNLSSPENAFFSSQMRRV 176

Query: 148 YSSGDLQGRTERGCSSESSLI---IEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKIK 207
           YS+GDLQ   E   SSE+S +    E   K  RYS EE++E+I +Y+ KRNQRNF K IK
Sbjct: 177 YSTGDLQNNMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIK 236

Query: 208 YECRKTLADSRKRIRGRFARNEE-IENSNSTSSPIETW 230
           Y CRKTLADSR RIRGRFARN+E +E  N      E W
Sbjct: 237 YACRKTLADSRPRIRGRFARNDEVVEIPNIEDDDSELW 274

[Close]

BLAST of ClCG03G001780 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 132 VRRVYSSGDLQ--GRTERGCSSESSLII------------EGMTKACRYSPEEKRERIER 191
           +RRVYS+GDLQ  GR   G  S SS +             E   +  RYS EE++E+I +
Sbjct: 139 MRRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISK 198

Query: 192 YKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEI-ENSNSTSS 225
           Y+ KR QRNF K IKY CRKTLAD+R R+RGRFARN+E+ EN    SS
Sbjct: 199 YRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKIASS 246

[Close]

BLAST of ClCG03G001780 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-15
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 131 AVRRVYSSGDLQGRTERGCSSESSLI------------IEG-----MTKACRYSPEEKRE 190
           +++R+++  DLQ     G  ++S L+            I G     + K  + SPE+++E
Sbjct: 254 SIKRMFNPEDLQKALGGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKE 313

Query: 191 RIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSN 221
           +I RY  KRN+RNFNKKIKY CRKTLADSR R+RGRFA+N+E    N
Sbjct: 314 KIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPN 360

[Close]

BLAST of ClCG03G001780 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0


Query: 131 AVRRVYSSGDLQGRTERGCSSESSLI------------IEG-----MTKACRYSPEEKRE 190
           +++R+++  DLQ     G  ++S L+            I G     + K  + SPE+++E
Sbjct: 254 SIKRMFNPEDLQA-LGGGAENQSHLVTPQAHPALGPVDINGLEDSTLNKVGKLSPEQRKE 313

Query: 191 RIERYKTKRNQRNFNKKIKYECRKTLADSRKRIRGRFARNEEIENSN 221
           +I RY  KRN+RNFNKKIKY CRKTLADSR R+RGRFA+N+E    N
Sbjct: 314 KIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPN 359

The following BLAST results are available for this feature:

BLAST of ClCG03G001780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895146.1	1.6e-113	87.16	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]
XP_011657991.1	5.5e-101	80.93	two-component response regulator-like APRR9 isoform X1 [Cucumis sativus] >KGN656...	[more]
XP_008457517.1	1.9e-98	79.62	PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo]	[more]
XP_022970463.1	5.7e-82	70.54	zinc finger protein CONSTANS-LIKE 5-like isoform X1 [Cucurbita maxima]	[more]
KAG7019213.1	2.8e-81	70.16	Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of ClCG03G001780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK53	8.4e-04	45.45	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q9FHH8	8.4e-04	46.30	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]

BLAST of ClCG03G001780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUR6	2.6e-101	80.93	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G497300 PE=4 SV...	[more]
A0A1S3C703	9.4e-99	79.62	zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC103497191...	[more]
A0A6J1I3X3	2.7e-82	70.54	zinc finger protein CONSTANS-LIKE 5-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1HLZ0	6.8e-81	70.04	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DVX1	3.4e-72	65.50	uncharacterized protein LOC111023585 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of ClCG03G001780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	2.7e-29	40.16	CCT motif family protein	[more]
AT5G41380.1	1.7e-20	43.04	CCT motif family protein	[more]
AT1G63820.1	1.2e-16	50.93	CCT motif family protein	[more]
AT2G33350.1	1.3e-15	43.93	CCT motif family protein	[more]
AT2G33350.2	1.4e-14	43.93	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 172..213 e-value: 3.0E-17 score: 62.4
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 171..213 score: 14.931653
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 22..255
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 22..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G001780.1	ClCG03G001780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding