ClCG02G023180 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G023180
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Nuclear transcription factor Y subunit
Location	CG_Chr02: 37564957 .. 37570336 (-)
RNA-Seq Expression	ClCG02G023180
Synteny	ClCG02G023180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGACTTTGCTCGTCAAGTGCGTGTCACGTGGGTCAAAATATATTATCCCAATTTCCACTTTTTATCCTGAAAATCGAATTTCCATAACCTCACCCGGCCGTGAGATTCAGTAGCTCACGACCCACGTCAACTGGGAACCCTCTTTAGCCGGTTGACTCGTCTGATTGACATCGAAACTTGGATGTCTTAGTCCGGTACTGGAAGGGCAGGTTGCCGGTGGATGAGTAGCTGGAACTGAAATGGGGTCCCGCAGTGGGTGAAGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCGTTGCTTTACTCCAATTACTGTGCTCTCTCAGTATGAGAATCGCTCAAGAACTGAATTGACTCTTCAATTCTTCTCTCTCTTTCTGTTTTTTTTTTTTTCTTTTTTCCCATATTCCCAGCGGTTGTTTCCTGAATCTAGGGCTTTGGATTTCCAGAATTTTCCATCCAAGTGAGTTCGTCTCTCTCTGACTTGATTTTGCAAGACTCTGGTTCCTTTTTTCTCATCTCGCTCTCTCTCGTGTATCTAATCTTACTCTAGGGTTTTACCAATTCAGTTTTTTCTCTTCCCTTTTTTTGGGTTTTGTTTATGTTCGAGTATTCTTCTCCTTGCATGGAATCGTGTCGGCTGGGGTTAATTGATTCATGCGGCTAGGATTTAGGATTTTGGATCGCTAGAGTGGAGAATTTCACTTGGAGGGGTTTCTTTGTGGAATTGGGATCTTGATGGGAATTTAGAAGTCACAAGTTCGACGATTTTTGCTCTTGTTTTTTAAGATTGAAATTGCGCCGTGCTATTCTGTTTTGCTCCTTCGAATTGAAATCTATCCAACTTTTTGGGTATTGGGTTCTGTTTGTTGTCTGCATGTGGGGATTATGGTTCGTGCAGTTCTTATTTGCCGAATTTAGGTTGGAATGTTAGTCGCCAAATATCGAAGTGAACGTTTTTTTATAGAACGCTATTAGTTACCTCTGCACTTGCATGTGGATAATTGGTATGCTGAACTTAGATGCCAAAGAGAACTTATTTAATCCAATAGACTAAACTATGACTAGATATTTGGCCGGAGCGTTTAGGAGGATTCATCAATAATTTCCTCCAACTTATTTCCCTTTCATTGTTGATATTTCTTGAGTTGCGGTTGGAGGAGTGATGGAAAAAGGTCGCCTATGATAATTTTTATTCTAGCATGGAGTCAAATGGAGCACCAAAATAAGATATGATGGTTGAAGTAGATAACTGAAGTTGTTTTGAAATTTGTGCATGGATATGAATGGAGCTTCACTCAACATTTCGGGAATTTGTTTATGTTTTGAATTAAAGGTTATGCTGCACTTCTGTCTCTTCAAAATTGAAACTTTAGGCTTTATTTTGCCTAGTTGGGCTTCGGGTTACAACTAGAGAAAGGGTTCCAACTAGGAGTATGCTGCACTTTTCTCTTCGGGTTCGGTTTTGAATGTTTTTTTTTTAATTATTCCCTAGGCTTTAGGCTTTAATTTTACCTAGTTGAAACCCTTTATTTAGTGGGTTGTTTTTTGTCGGATGCTCTTCTATTCTTTCATTTTCTTTCTCAATTAAAGTAGTTTTTTCAAAAAATAAAAAATAAAAAAAAATAAATAAATTGAAACTTTAGGAGTTCCAAGTTGTGATTTAGCTGAGCCCATATAGCATTTACGATTCCAAAATTCTGCAAACACAAAATAGAAACTGATTTGTTTTCTGTCCTTGATCTTGAACTCAATTGACGGATAACTTGATAAGTAATTCTGCTTAGCAGGAAGACCTGAAGAAATTAAAGTTGTAGAGCATTTTACTTCCAAGGAACTGATAAGCCTCATTCAAGCGAACAATGAGCAATGCTCTGCACAAGGATTGGATACAGTCAAAGTATGATATGGGAAAGATTATGTAATCATAATTGGAAGGAAACAAAAAACAAAGTTAATTGTTGAGTCTGGCACTTGCTGCTGCCTGAGGTTAAGCTTTTCTTGGTGATCATCTCCCAGCCTTTCCATGTATTTTCTCCCAGCTTCCTGAATAGTGAAAACTAAACCACCCTCTCTCATCTCAAACCATTTACTTTAAGACTGTAAGCAAAACTGCTTCAGCTGGCCGTTGAATGTTCTTTTTAATTTCCTTCTCTCACGTTTTATTTTAAACCTAAGGAATCAAACTCTTTCCCCTTCTCTTCAGAAAAGAATAGTGGACATGGACGATGTTTAAGGTTTTCAAAATAAAAAATGCTTCATTTTTCTTCTCTTCCTTTGGATGCCTTCTTTCCACTGCTTTTAGCATAGGCTGATGGCTTCTTCTCTGTTTATCCAACATTTGTTCTGCATGGTCTGTGTATTCTAGTCAATTCCATCCTTATATCTTATCTAACATGTATATTTGTTATGAAGGTATGCAGTCGAAGTCTAAAAGTGTGAATCATCTAGGATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAACCATATCTCCCCGCCACCAGCAGGAGGGAATGTGTCCAATTCAACATCACTGGAATGTACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCGATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGGTATGGCCCTCAACTTGGCGTTTTTGCTTGCTAAATCATGTTATAGTTCAAAGAAAGGCACTTATTGTTTTTAGCCTCTTTAGTTATGAGTTGGAATTATTGCACATTTGAGGACAATGACAATATCGCCTCATTGGATTGTTAACAATCATGTTACTGTCAAATTCACCAGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCATTTGCAAGTCTGGCTGATTTCTTTTCTACTTTAGACTTTAGAGAGATCCTTCTTACTCTCAGAGTCCAGTTTTGAATATTGAACGACATTGGTGTTTTATTAACACATCAGTTTAAGATGCTTTTGAGTTTGGTGGGATTACTAGTTTATTTTAATATTTTTCAGGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGTATGTAGGTTAAAATCATAAAAGATCAGGTGATGAGATGTACAGATATATATGTATATTTTTCTTGTAATTTTTGCACCATAGACTTTTTTAGGTGTATATTAGCCCTGGGTAATTTTGATGGTACTCTTGCTTTTTGCTTCCTCGTTTTTCACTTTTATTTTCAATGTTTTTCCTCGTACTGATTTTTGCTTTCTCAAACTATTTCAATTAAAATAACATATGAGTATATATAGTGAACTAACTGAAAATTTCCAGCTTCTTGGAAGAGGTTGTAGTGTGATAATTTTAGTATCTTGGCCTGGAAGTATTTATTTCTTTTTTCTTGGCCATAATGATGAGGTCGTATGTCAAGGATGTCTGAGATCATTGTGGGTTTTCCTGATATGTAAGAATTGAAGTTTGCCCTTGACAAGTCCTTCTTATGGTAGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGGTACAACTTCTATTTAGATGATCGCCTTCCCTGTACTACAACTTGTCTCTTATACATGTTAAAGTAGCTGGAAATCTAACGCCTTTTTAATTGTATTTTACTCTTAATGAAGTTCATTCTTCCCTGTGCTGCAAATTTGATTAGGTACTTTATTAAATTCTCTTACTGGGTAGTGTTCTATTGTTTAATTACCGTAAGCATGTGAGTGAAGGGCAACTAAAAAATTATTTTGTTGTGCTGGACAGTGGAGTGGATGTACTAACATAGGCTTTTTAAACATGGTATAAGCTTCCCTTATCATCAGTGATTTTTCTGGAATATAACTTGATTTATACCTAGTCTACCCTGTATATATTGAATGCTTAGGATACCATTATTACCAAATTGATTATATTCCAGCTACCCACATTGAAATGGTTTGCTTTATTCTCATAATCAGATTCCGTGCAAGTGGGAAGTAACTTATGTATTCCAGCTTAAACTTGCTATAAGGATTGTTGAGTTCTAAAATGAATATGGTTAGTACCAAACACCTATATCAATTGCCGAGTCGTTGTTTCAAGACCTTACAAGACCGATAAAAAGGATTCAAAGGAATTAGGGGGAAGAAGTAAGGTTGCATTGTGATTATGGTTATGTAGGACCAGAGGTTGTTAACTGAAGGTAAAAGTATAACAAACTGTCTCGATATAAAACCACAACTGATTCGGACCTTTGAGCCTTCATTTATATTTCACATTGGGTGTTGGGGTGACCATGTATGGTTGACTCACACTAATTCAAGGTTGAGTTATACTGAGTCAAAGCTGGTCTTTCACAATTTCATGATTTCTTCTGGCCGTATATAGTTCTTAATAGCTAATTCATTTCCCTTTGAGACAAAGATGGCTTAGCTGACTCAGAGCAGTTTATGCATGGTGTTATATATATGTATGTATGGTCTTATGGATGGATGGATGGATGGGCCACGGTTAGATTTGAAAAATCAAACGTTGTTGAGGGTTGGGGCCTTTTTTTTTTTCCTAATTTAAAACAATTCTTTTGTTATAGCTTATATGCAGGTATGTATGTTTCTGAAGTTCCTCTAATTTTTAGCTTGTGTTTTATTTTACACAGCCATATCTTCATGAATCACGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGAGTTCTACTCTGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCGTCGCATTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGAAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATTTGAACGGCAGTAGCCAATTCCATAATTACAGTAGCTTCCAAGCTTCTCCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTGTCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGA

mRNA sequence

ATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGACTTTGCTCGTCAATGGGTGAAGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCGTTGCTTTACTCCAATTACTGTGCTCTCTCAGGCTTTGGATTTCCAGAATTTTCCATCCAAGTGAGTTCGTCTCTCTCTGACTTGATTTTGCAAGACTCTGGTATGCAGTCGAAGTCTAAAAGTGTGAATCATCTAGGATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAACCATATCTCCCCGCCACCAGCAGGAGGGAATGTGTCCAATTCAACATCACTGGAATGTACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCGATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCACGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGAGTTCTACTCTGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCGTCGCATTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGAAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATTTGAACGGCAGTAGCCAATTCCATAATTACAGTAGCTTCCAAGCTTCTCCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTGTCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGA

Coding sequence (CDS)

ATGCGGTCCCCACTTTTGCGCCAAGCGTTTCCCGGACTTTGCTCGTCAATGGGTGAAGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGGGTCGTTGCTTTACTCCAATTACTGTGCTCTCTCAGGCTTTGGATTTCCAGAATTTTCCATCCAAGTGAGTTCGTCTCTCTCTGACTTGATTTTGCAAGACTCTGGTATGCAGTCGAAGTCTAAAAGTGTGAATCATCTAGGATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAACCATATCTCCCCGCCACCAGCAGGAGGGAATGTGTCCAATTCAACATCACTGGAATGTACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCGATGTCAAATGATGATTTAAATGAAGACGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCTCCTACAGTGCATGGTGGATGTATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTATCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCACGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGTGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGAGTTCTACTCTGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCGTCGCATTCTGCTGGTTCATCTGGTTCTGAAGCAGCGCCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGAAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATTTGAACGGCAGTAGCCAATTCCATAATTACAGTAGCTTCCAAGCTTCTCCGTATGGTTTACGGTCTGGTGAGAGAGGTGAAGATGGAGACTGCTCGGGACAGCAGCGAAGTGTCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MRSPLLRQAFPGLCSSMGEGTVAVALEFEFPKGSLLYSNYCALSGFGFPEFSIQVSSSLSDLILQDSGMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNYSSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK

Homology

[Close]

BLAST of ClCG02G023180 vs. NCBI nr
Match: XP_011657641.1 (nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_011657642.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743004.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743005.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >KGN48130.1 hypothetical protein Csa_003198 [Cucumis sativus])

HSP 1 Score: 625.9 bits (1613), Expect = 2.4e-175
Identity = 322/341 (94.43%), Postives = 331/341 (97.07%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN L SEPPNMQQTSS+SEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQHNCQHAVSAAP VH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of ClCG02G023180 vs. NCBI nr
Match: XP_008449708.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo] >XP_008449709.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 623.6 bits (1607), Expect = 1.2e-174
Identity = 324/341 (95.01%), Postives = 329/341 (96.48%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN   SEPPNMQQTSSYSEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAP VH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of ClCG02G023180 vs. NCBI nr
Match: XP_038901586.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901587.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901588.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901589.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 618.6 bits (1594), Expect = 3.8e-173
Identity = 322/341 (94.43%), Postives = 329/341 (96.48%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN L SEPPNMQQTS Y+EPWWRSIGYNHIS PPAGGN+SNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSGYTEPWWRSIGYNHIS-PPAGGNLSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQ AVSAAPTVHGGC+TQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQLAVSAAPTVHGGCVTQPPQLELVG 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANS SST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           S SGQAISSHSAGSSGSEAAPCALAETWNSS+GQQE RTQLHEAYEARSY+N  SQFHNY
Sbjct: 241 SASGQAISSHSAGSSGSEAAPCALAETWNSSSGQQEARTQLHEAYEARSYVNHGSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERGEDGDCSGQQRS+SENQA QRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGEDGDCSGQQRSISENQAGQRRLAIK 340

[Close]

BLAST of ClCG02G023180 vs. NCBI nr
Match: XP_011657643.1 (nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus] >XP_011657644.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 609.8 bits (1571), Expect = 1.8e-170
Identity = 317/341 (92.96%), Postives = 326/341 (95.60%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN L SEPPNMQQTSS+SEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQHNCQHAVSAAP VH GCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of ClCG02G023180 vs. NCBI nr
Match: XP_008449711.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_016900766.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 607.4 bits (1565), Expect = 8.8e-170
Identity = 319/341 (93.55%), Postives = 324/341 (95.01%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN   SEPPNMQQTSSYSEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAP VH GCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of ClCG02G023180 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-52
Identity = 137/278 (49.28%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 68  GMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGAS 127
           G +++ +  NH   + P M     Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 6   GRENEEEVNNHHAVQQPMM-----YAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 65

Query: 128 ESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQHNCQHAVSAAPTV---HGGCITQPP 187
           ESND  S S D     ++D T KDS A  S   V ++       A ++   H   + QPP
Sbjct: 66  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 125

Query: 188 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 247
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 126 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 185

Query: 248 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSS 307
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 186 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG- 245

Query: 308 STLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 340
                +D+G        +  SSGSE       ET NSS
Sbjct: 246 -----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of ClCG02G023180 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.4e-47
Identity = 154/349 (44.13%), Postives = 191/349 (54.73%), Query Frame = 0


Query: 69  MQSKSKS-VNHLGSEPPNMQQTSSYS-EPWWR-SIGYNHISPPPAGGNVSNSTSLECTNG 128
           M SKS S  N + SE      +S  S  PW R +   N  S   AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 129 ASESNDGQSMSNDD--LNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQ 188
           A ESN  +S SN D  +N++    T+  S   Y               ++H G    PP 
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQE---------SLHHGITQPPPH 125

Query: 189 LELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 248
            +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVN
Sbjct: 126 PQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVN 185

Query: 249 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSS 308
           AKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +
Sbjct: 186 AKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEA 245

Query: 309 STLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNG 368
           S  K ++  +G    S S+ +S          E WN      + RT   +  ++ +Y   
Sbjct: 246 SKRKAEEKSNGHVTQSPSSSNSDQ-------GEAWNG-----DYRTPQGDEMQSSAY--- 303

Query: 369 SSQFHNYSSFQASPYGLRSGERGEDGDCSGQQ-RSVSENQAAQRRLAIK 410
                               +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 --------------------KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of ClCG02G023180 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-21
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 189 HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 248
           +S+A    PY DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 249 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEANSSSSTL 308
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF  AKK + +   S+ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 309 KDKDS-GSGQAISSHSAGSS 324
           ++K +  +G++  + S+G+S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of ClCG02G023180 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.1e-21
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 197 PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 256
           PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 257 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEANSSSSTLKDKDS 316
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF  AKK   +         D 
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDE 173

Query: 317 GSGQAISS 318
            + +A SS
Sbjct: 174 NTSEASSS 181

[Close]

BLAST of ClCG02G023180 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.4e-21
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 201 PYYAGVMA---AYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARA 260
           P++ G ++   A  H   +P   G+  +RM LP  + + EP+FVNAKQYQ ILRRR+ RA
Sbjct: 132 PHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRA 191

Query: 261 KAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTL 305
           K E +NKLIKVRKPYLHESRH HA++R RGSGGRF    +   S+S+L
Sbjct: 192 KLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSSL 239

[Close]

BLAST of ClCG02G023180 vs. ExPASy TrEMBL
Match: A0A0A0KEL9 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G439960 PE=3 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.2e-175
Identity = 322/341 (94.43%), Postives = 331/341 (97.07%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN L SEPPNMQQTSS+SEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQHNCQHAVSAAP VH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of ClCG02G023180 vs. ExPASy TrEMBL
Match: A0A1S3BNK4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.7e-175
Identity = 324/341 (95.01%), Postives = 329/341 (96.48%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN   SEPPNMQQTSSYSEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAP VH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of ClCG02G023180 vs. ExPASy TrEMBL
Match: A0A1S4DXQ9 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 4.3e-170
Identity = 319/341 (93.55%), Postives = 324/341 (95.01%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSKSKSVN   SEPPNMQQTSSYSEPWWRSIGYNHISPP AGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQLELVG 188
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAP VH GCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 189 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 248
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 249 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDKD 308
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+KDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 309 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHNY 368
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQE RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 369 SSFQASPYGLRSGERGEDGDCSGQQRSVSENQAAQRRLAIK 410
           SSFQAS YGLRSGERG+DGDCSGQQRS+SENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of ClCG02G023180 vs. ExPASy TrEMBL
Match: A0A6J1FW74 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.6e-169
Identity = 331/411 (80.54%), Postives = 341/411 (82.97%), Query Frame = 0


Query: 1   MRSPLLRQAFPGLCSSMGEGTVAVALEFEFPKGSLLYSNYCALSGFGFPEFSIQVSSSLS 60
           MRSPLLRQAFPGLCSS                                            
Sbjct: 1   MRSPLLRQAFPGLCSS-------------------------------------------- 60

Query: 61  DLILQDSGMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSL 120
                 S   SK +SVN L SEPPNMQQTSSYSEPWWRSIGYN ISPP AGGN+SNSTSL
Sbjct: 61  ------SECHSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSL 120

Query: 121 ECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQHNCQHAVSAAPTVHGGCIT 180
           EC NGASESNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQ+N QHAVSAAPTVHGGCIT
Sbjct: 121 ECPNGASESNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCIT 180

Query: 181 QPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVF 240
           QPPQLELVGHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVF
Sbjct: 181 QPPQLELVGHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVF 240

Query: 241 VNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANS 300
           VNAKQYQGILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE NS
Sbjct: 241 VNAKQYQGILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNS 300

Query: 301 SSSTLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYL 360
           SSST+K+KDSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHEAY+ARSY+
Sbjct: 301 SSSTMKNKDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYV 360

Query: 361 NGSSQFHNYSSFQASPYGLRSGERGEDGDCSGQQR-SVSENQAAQRRLAIK 410
           NGS QFHNYSSFQAS Y LRSGERG+DGDCSGQQR S+SENQAAQRRLAIK
Sbjct: 361 NGSEQFHNYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of ClCG02G023180 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 2.1e-169
Identity = 318/343 (92.71%), Postives = 327/343 (95.34%), Query Frame = 0


Query: 69  MQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGASE 128
           MQSK +SVN L SEPPNMQQTSSYSEPWWRSIGYNHIS P AGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 129 SNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQHNCQHAVSAAPTVHGGCITQPPQLELV 188
           SNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQ+NCQHAVSAAPTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 189 GHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 248
           GHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 249 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSSSTLKDK 308
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE NSSSST+K+K
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 309 DSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNGSSQFHN 368
           DSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQE RTQLHEAYEARSY+NGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 369 YSSFQASPYGLRSGERGEDGDCSGQQR-SVSENQAAQRRLAIK 410
           YSSFQAS Y LRSGERG+DGDCSGQQR S+SENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of ClCG02G023180 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 209.1 bits (531), Expect = 6.5e-54
Identity = 136/279 (48.75%), Postives = 172/279 (61.65%), Query Frame = 0


Query: 68  GMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGAS 127
           G +++ +  NH   + P M     Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 6   GRENEEEVNNHHAVQQPMM-----YAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 65

Query: 128 ESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVS------AAPTVHGGCITQP 187
           ESND  S S D     ++D T KDS A+      N  H +       +   +H   + QP
Sbjct: 66  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDN--HGMEGNDPALSIRNMHDQPLVQP 125

Query: 188 PQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFV 247
           P  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+V
Sbjct: 126 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 185

Query: 248 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSS 307
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  + 
Sbjct: 186 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 245

Query: 308 SSTLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 340
                 +D+G        +  SSGSE       ET NSS
Sbjct: 246 ------EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of ClCG02G023180 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 209.1 bits (531), Expect = 6.5e-54
Identity = 136/279 (48.75%), Postives = 172/279 (61.65%), Query Frame = 0


Query: 68  GMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGAS 127
           G +++ +  NH   + P M     Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 6   GRENEEEVNNHHAVQQPMM-----YAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 65

Query: 128 ESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVS------AAPTVHGGCITQP 187
           ESND  S S D     ++D T KDS A+      N  H +       +   +H   + QP
Sbjct: 66  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDN--HGMEGNDPALSIRNMHDQPLVQP 125

Query: 188 PQLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFV 247
           P  ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+V
Sbjct: 126 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 185

Query: 248 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSS 307
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  + 
Sbjct: 186 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG 245

Query: 308 SSTLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 340
                 +D+G        +  SSGSE       ET NSS
Sbjct: 246 ------EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of ClCG02G023180 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-53
Identity = 137/278 (49.28%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 68  GMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGAS 127
           G +++ +  NH   + P M     Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 6   GRENEEEVNNHHAVQQPMM-----YAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 65

Query: 128 ESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQHNCQHAVSAAPTV---HGGCITQPP 187
           ESND  S S D     ++D T KDS A  S   V ++       A ++   H   + QPP
Sbjct: 66  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 125

Query: 188 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 247
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 126 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 185

Query: 248 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSS 307
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 186 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG- 245

Query: 308 STLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 340
                +D+G        +  SSGSE       ET NSS
Sbjct: 246 -----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of ClCG02G023180 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-53
Identity = 137/278 (49.28%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 68  GMQSKSKSVNHLGSEPPNMQQTSSYSEPWWRSIGYNHISPPPAGGNVSNSTSLECTNGAS 127
           G +++ +  NH   + P M     Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 6   GRENEEEVNNHHAVQQPMM-----YAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 65

Query: 128 ESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQHNCQHAVSAAPTV---HGGCITQPP 187
           ESND  S S D     ++D T KDS A  S   V ++       A ++   H   + QPP
Sbjct: 66  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 125

Query: 188 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 247
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 126 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 185

Query: 248 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSS 307
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 186 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG- 245

Query: 308 STLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 340
                +D+G        +  SSGSE       ET NSS
Sbjct: 246 -----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of ClCG02G023180 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-48
Identity = 154/349 (44.13%), Postives = 191/349 (54.73%), Query Frame = 0


Query: 69  MQSKSKS-VNHLGSEPPNMQQTSSYS-EPWWR-SIGYNHISPPPAGGNVSNSTSLECTNG 128
           M SKS S  N + SE      +S  S  PW R +   N  S   AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 129 ASESNDGQSMSNDD--LNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPTVHGGCITQPPQ 188
           A ESN  +S SN D  +N++    T+  S   Y               ++H G    PP 
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQE---------SLHHGITQPPPH 125

Query: 189 LELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 248
            +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVN
Sbjct: 126 PQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVN 185

Query: 249 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSS 308
           AKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +
Sbjct: 186 AKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEA 245

Query: 309 STLKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEERTQLHEAYEARSYLNG 368
           S  K ++  +G    S S+ +S          E WN      + RT   +  ++ +Y   
Sbjct: 246 SKRKAEEKSNGHVTQSPSSSNSDQ-------GEAWNG-----DYRTPQGDEMQSSAY--- 303

Query: 369 SSQFHNYSSFQASPYGLRSGERGEDGDCSGQQ-RSVSENQAAQRRLAIK 410
                               +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 --------------------KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of ClCG02G023180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657641.1	2.4e-175	94.43	nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_0116...	[more]
XP_008449708.1	1.2e-174	95.01	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_038901586.1	3.8e-173	94.43	nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >...	[more]
XP_011657643.1	1.8e-170	92.96	nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus] >XP_0116...	[more]
XP_008449711.1	8.8e-170	93.55	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]

BLAST of ClCG02G023180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.6e-52	49.28	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	4.4e-47	44.13	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.4e-21	46.43	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	4.1e-21	49.22	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LVJ7	5.4e-21	53.70	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of ClCG02G023180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEL9	1.2e-175	94.43	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G43996...	[more]
A0A1S3BNK4	5.7e-175	95.01	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A1S4DXQ9	4.3e-170	93.55	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A6J1FW74	1.6e-169	80.54	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JHB5	2.1e-169	92.71	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]

BLAST of ClCG02G023180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	6.5e-54	48.75	nuclear factor Y, subunit A1	[more]
AT5G12840.4	6.5e-54	48.75	nuclear factor Y, subunit A1	[more]
AT5G12840.1	1.1e-53	49.28	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.1e-53	49.28	nuclear factor Y, subunit A1	[more]
AT3G20910.1	3.1e-48	44.13	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 237..259 score: 74.15 coord: 268..291 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 233..294 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 236..291 e-value: 2.4E-26 score: 92.1
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 98..395
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 234..294 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 234..296 e-value: 3.9E-30 score: 106.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 364..409
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..92
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 98..395
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 239..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G023180.2	ClCG02G023180.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity