
ClCG02G022350 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAAGAGATCCAGATCGAGTAGCGAGGCGGAGGTGGAGTCGCGAGTGAACTTGAACCGGTCGCCAACGACGTCATCTTCATCTTCGTCGGTGAGCTCATTTGGAGGGTCGGGGTTGGGGTCAGGGGCAGGATCGTCGTCGGAGATATCAGTGGGGAATTCGTGCTTGTCGTGCGAGGGGGAAGAACGACATGGTGGATTGGAAGAGATAATAACAAGATCAATGATGCTTGTGGGATGTCCGGGTTGCTTCATGTACGTGATGTTGACAGAGAAGAGCTCACAATGCCCAAAATGCAAGAACAATGTGTTTCTCGATTTCTTCAAGCAACAATCACATCATAACTAG ATGAGCAAGAGATCCAGATCGAGTAGCGAGGCGGAGGTGGAGTCGCGAGTGAACTTGAACCGGTCGCCAACGACGTCATCTTCATCTTCGTCGGTGAGCTCATTTGGAGGGTCGGGGTTGGGGTCAGGGGCAGGATCGTCGTCGGAGATATCAGTGGGGAATTCGTGCTTGTCGTGCGAGGGGGAAGAACGACATGGTGGATTGGAAGAGATAATAACAAGATCAATGATGCTTGTGGGATGTCCGGGTTGCTTCATGTACGTGATGTTGACAGAGAAGAGCTCACAATGCCCAAAATGCAAGAACAATGTGTTTCTCGATTTCTTCAAGCAACAATCACATCATAACTAG ATGAGCAAGAGATCCAGATCGAGTAGCGAGGCGGAGGTGGAGTCGCGAGTGAACTTGAACCGGTCGCCAACGACGTCATCTTCATCTTCGTCGGTGAGCTCATTTGGAGGGTCGGGGTTGGGGTCAGGGGCAGGATCGTCGTCGGAGATATCAGTGGGGAATTCGTGCTTGTCGTGCGAGGGGGAAGAACGACATGGTGGATTGGAAGAGATAATAACAAGATCAATGATGCTTGTGGGATGTCCGGGTTGCTTCATGTACGTGATGTTGACAGAGAAGAGCTCACAATGCCCAAAATGCAAGAACAATGTGTTTCTCGATTTCTTCAAGCAACAATCACATCATAACTAG MSKRSRSSSEAEVESRVNLNRSPTTSSSSSSVSSFGGSGLGSGAGSSSEISVGNSCLSCEGEERHGGLEEIITRSMMLVGCPGCFMYVMLTEKSSQCPKCKNNVFLDFFKQQSHHN Homology
BLAST of ClCG02G022350 vs. NCBI nr
Match: KGN48041.1 (hypothetical protein Csa_002820 [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40 Identity = 100/115 (86.96%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of ClCG02G022350 vs. NCBI nr
Match: KAA0061725.1 (hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa] >TYJ96061.1 hypothetical protein E5676_scaffold182G00200 [Cucumis melo var. makuwa]) HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37 Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = 0
BLAST of ClCG02G022350 vs. NCBI nr
Match: KAG6570472.1 (NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 126.7 bits (317), Expect = 1.3e-25 Identity = 81/120 (67.50%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of ClCG02G022350 vs. NCBI nr
Match: KAG7035922.1 (hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125.6 bits (314), Expect = 2.9e-25 Identity = 78/116 (67.24%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of ClCG02G022350 vs. NCBI nr
Match: KAG7010337.1 (hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125.6 bits (314), Expect = 2.9e-25 Identity = 81/121 (66.94%), Postives = 87/121 (71.90%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.3e-07 Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 2.6e-05 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy TrEMBL
Match: A0A0A0KJX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425780 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.9e-41 Identity = 100/115 (86.96%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy TrEMBL
Match: A0A5D3BBS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00200 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.1e-38 Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy TrEMBL
Match: A0A4P1R0I2 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_17077 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 3.1e-09 Identity = 54/118 (45.76%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy TrEMBL
Match: A0A151R2G4 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_042134 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.3e-09 Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of ClCG02G022350 vs. ExPASy TrEMBL
Match: A0A2I4FHX4 (uncharacterized protein LOC108998926 OS=Juglans regia OX=51240 GN=LOC108998926 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 5.3e-09 Identity = 51/120 (42.50%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of ClCG02G022350 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0
BLAST of ClCG02G022350 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 4.4e-08 Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of ClCG02G022350 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06 Identity = 25/63 (39.68%), Postives = 38/63 (60.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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