
ClCG02G019540 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGGCAGAGAAAACACGTGGCAGAACACGGTTGGACAAAGGTAGTAACTACACGTTCCAGTACGAGCAGAGAATTTGGGTATAAAAAGCGGAGGCATCTCCTTCCCCACCCGATCAATTCCCCTAAGCGCAGGCTACTGTGAAGGAACTATTTTCTTGAAGTGAGATTTTCCCGGCGAAATGGCGAAAACGCCATTACTTATTTTGTGTACCTTCCTCCTACTAGGAACCCTAACTCTCATCCAGGTAATCATTCTCGATCTCTATCAAATTTCTCTTCGTAATTGGATCGCCTATTCGGCGATAGGTTTTTCTACGCTGTAAAGAAGTGCTTCTTGTTTCTCTGTGATCTGTCGTGCGTTCTAGATCTGTAATCAAGTCCGATTTCATTTAGTGGTTCGAGAGTGAGGTTTTAGATCTTTATATTCTGGTTTAGCTCGTTTGGATGAGGATTGGAATAAGGTTTATAAAGTGAAATCAGAAAATTATTCTATGAAATTTCTAATTCCAGGCAAAGAAGTCGAAGGAGAATCTGAAAGAAGTGACTCACAAGGTTTACTTCGATGTGGAAATTGACGGAAAGGCTGCTGGTATGATCGATTTTGTTTTTTCTTAATTGAAATAGTGCGAATCAGAATAAGAGTATACTGCTGCAGCAATTAACGTATAAATAGGATGCTTGATTTCAGTTATCATGCTTTCGACTAGGCATCTACACTGATATACCTAAATTAACTAACTAATTTTGTATGACATGCTTTATTTCCGTTATTACGATGTTATGCTCGATCGATTAAGCTTTCTTAGTTAACTATAGTTTAACCTCAATCATCTTGTTCGTCAGTATAAAAAGTATACGTGCTCTGTGGTGGCACAATGCAACGTAATAGCCGATGTATGTACATGCTTAATGAACCAACGAGTAGTAGTTTAGTGTGATATAATGTTTAGACATTTTTTCATGAATTGTAGTTTAACCGTTTACTGATTTGGCTGTACTTGAGACATCAGATGTTCTACTATACTATAGAATGCATACCACTTGAATCATGTTTGCCGCATAATGTAGTAAAGGGCAGGCCAAAGCCCATTTTTCCTTGAACACAATTATATAGTGCTTAGTTATCTGCCGAGACTGGGTGTATTTGATATGTTAGATTTTGTTTACTATTACAGATGGCGTGTTATTTGAATGATGAATGATATTTGTCGCATTATCACATAATGAAGGATGTGAAGGAAAGTTCAACGCTCATTTATACTAAGGGCTATTAAGAGCGGAGATTTCACACTTCAGAGTTTAACTAAGTTAAAACATATTTTGGCTTGGATCTTTGGTTAATTTGGATGATAACTGTTGTACAGGTCGTATTGAGATGGGTCTTTTCGGGAAGGCTGTTCCTAAAACCGCTGGTATGTTATTTATTTGTAGTCTGAACTATCCATTATGCTGAATTATGTACACCGCATGCTATTTGATTGTATCTCTCACTAATTACGGACTCTTCCTCGTGTGGTTATGCAGAAAATTTCCGAGCATTATGCACCGGTAAGGAGATAACTAAGTTGCATCTTCGCAGTTGAGGTTTTAGCTTTCTTACTTTATAAGATGCACTGAATCAAAATATGTGTGGTACAACATATAATGCCCTCCTCTATGGCTCTACCTCATAATCCCCTAAATAAATTTAAAGGAAGTAGTTGTTAGTGTTTTAATTAGTTGATCTTCTTTAACGCATTCAACGGGTTACTTGGATTTTGTTTTGATTATTTAGGTCCGGTTTAATCACCATGCTTCATGGTTTTTAGTTTTTATAAATTAACGGTATAAAAACCCATTCTATATTTCCGAGAGGAAATAGACTTAAATTCAAAAACAAATAATAGAGTAGAAATGAAAAGCAGGTTTCTAATTCATGATTCCCATTTTCAGGTGAGAAGGGTGTTGGGCAGAGCGGAAAACCTCTACACTACAAGGGTAGTGCATTCCACAGGATAATTCCCAGCTTCATGATTCAAGGAGGAGACTTTACCCTCGGTGATGGAAGAGGTGGAGAATCAATCTATGGAGAGAAGTTCGCCGACGAGAATTTCAAGCTGAAGCATACTGGGCCAGGTAAAAAGATCAACCTTACCCTTCAGTGTAAGTATTCAACTGGTCTCCATAATTGAAGATTCAATATAAAACATAAGCGCAGGCCTTCTGTCCATGGCAAACGCCGGTCCAGACACAAATGGTTCACAATTTTTCATCACTACAGTGACAACTAGCTGGTAAAAATCCCTGTTTAGCATAAGTTAATTTGTTGTTTGATCATTAAAAATAAATAAGGGCAATGATTTGAGTAAGAATTTTATTATTACACAGGCTGGATGGTAGACACGTAGTATTTGGAAAGGTGCTGTCTGGAATGGACGTGGTTTATAAAATCGAAGCTGAGGGAAGGCAAAATGGAACACCTAAGAGCAAAGTTGTGATTGCAGACAGCGGCGAGCTCCCTCTATGATTGACAGGTCGGCCCTTTTTTTTCCCTATCTAAGCAAAGCATAGTATGGCCGTTATCCACTCCTCTCCTTTGCTTTTCTTTTTATGTGCTGTTGACACTAGGATTGGTGGTGCACAACGGATCTCTTAATTTAATGGCTTTGGTTTTCGTTTTCGTCCTTTTTAGTTATGTTTGATTCTCCGAATTTTACATCATTTGGCAACTAGGTGCTGCTCGTGCTCAACTTAATGAACTTTGGTCGGTTAACATAA ATGGGAGGGCAGAGAAAACACGTGGCAGAACACGGTTGGACAAAGGCAAAGAAGTCGAAGGAGAATCTGAAAGAAGTGACTCACAAGGTTTACTTCGATGTGGAAATTGACGGAAAGGCTGCTGGTCGTATTGAGATGGGTCTTTTCGGGAAGGCTGTTCCTAAAACCGCTGAAAATTTCCGAGCATTATGCACCGGTAAGGAGATAACTAAGTTGCATCTTCGCAGTGAGAAGGGTGTTGGGCAGAGCGGAAAACCTCTACACTACAAGGGTAGTGCATTCCACAGGATAATTCCCAGCTTCATGATTCAAGGAGGAGACTTTACCCTCGGTGATGGAAGAGGTGGAGAATCAATCTATGGAGAGAAGTTCGCCGACGAGAATTTCAAGCTGAAGCATACTGGGCCAGGCCTTCTGTCCATGGCAAACGCCGGTCCAGACACAAATGGTTCACAATTTTTCATCACTACAGTGACAACTAGCTGGCTGGATGGTAGACACGTAGTATTTGGAAAGGTGCTGTCTGGAATGGACGTGGTTTATAAAATCGAAGCTGAGGGAAGGCAAAATGGAACACCTAAGAGCAAAGTTGTGATTGCAGACAGCGGCGAGCTCCCTCTATGATTGACAGGTCGGCCCTTTTTTTTCCCTATCTAAGCAAAGCATAGTATGGCCGTTATCCACTCCTCTCCTTTGCTTTTCTTTTTATGTGCTGTTGACACTAGGATTGGTGGTGCACAACGGATCTCTTAATTTAATGGCTTTGGTTTTCGTTTTCGTCCTTTTTAGTTATGTTTGATTCTCCGAATTTTACATCATTTGGCAACTAGGTGCTGCTCGTGCTCAACTTAATGAACTTTGGTCGGTTAACATAA ATGGGAGGGCAGAGAAAACACGTGGCAGAACACGGTTGGACAAAGGCAAAGAAGTCGAAGGAGAATCTGAAAGAAGTGACTCACAAGGTTTACTTCGATGTGGAAATTGACGGAAAGGCTGCTGGTCGTATTGAGATGGGTCTTTTCGGGAAGGCTGTTCCTAAAACCGCTGAAAATTTCCGAGCATTATGCACCGGTAAGGAGATAACTAAGTTGCATCTTCGCAGTGAGAAGGGTGTTGGGCAGAGCGGAAAACCTCTACACTACAAGGGTAGTGCATTCCACAGGATAATTCCCAGCTTCATGATTCAAGGAGGAGACTTTACCCTCGGTGATGGAAGAGGTGGAGAATCAATCTATGGAGAGAAGTTCGCCGACGAGAATTTCAAGCTGAAGCATACTGGGCCAGGCCTTCTGTCCATGGCAAACGCCGGTCCAGACACAAATGGTTCACAATTTTTCATCACTACAGTGACAACTAGCTGGCTGGATGGTAGACACGTAGTATTTGGAAAGGTGCTGTCTGGAATGGACGTGGTTTATAAAATCGAAGCTGAGGGAAGGCAAAATGGAACACCTAAGAGCAAAGTTGTGATTGCAGACAGCGGCGAGCTCCCTCTATGA MGGQRKHVAEHGWTKAKKSKENLKEVTHKVYFDVEIDGKAAGRIEMGLFGKAVPKTAENFRALCTGKEITKLHLRSEKGVGQSGKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGRQNGTPKSKVVIADSGELPL Homology
BLAST of ClCG02G019540 vs. NCBI nr
Match: XP_038900337.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Benincasa hispida]) HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97 Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of ClCG02G019540 vs. NCBI nr
Match: XP_008464041.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucumis melo]) HSP 1 Score: 366.3 bits (939), Expect = 1.7e-97 Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of ClCG02G019540 vs. NCBI nr
Match: XP_023007282.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucurbita maxima] >XP_023532306.1 peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 364.4 bits (934), Expect = 6.6e-97 Identity = 181/193 (93.78%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of ClCG02G019540 vs. NCBI nr
Match: XP_004143158.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucumis sativus] >KGN47081.1 hypothetical protein Csa_020771 [Cucumis sativus]) HSP 1 Score: 363.2 bits (931), Expect = 1.5e-96 Identity = 181/193 (93.78%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of ClCG02G019540 vs. NCBI nr
Match: XP_022948226.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucurbita moschata]) HSP 1 Score: 362.8 bits (930), Expect = 1.9e-96 Identity = 180/193 (93.26%), Postives = 181/193 (93.78%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy Swiss-Prot
Match: Q9SP02 (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana OX=3702 GN=CYP20-1 PE=1 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 3.6e-90 Identity = 161/193 (83.42%), Postives = 173/193 (89.64%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy Swiss-Prot
Match: Q8LDP4 (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana OX=3702 GN=CYP19-4 PE=1 SV=2) HSP 1 Score: 329.7 bits (844), Expect = 2.3e-89 Identity = 160/190 (84.21%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy Swiss-Prot
Match: Q8L8W5 (Peptidyl-prolyl cis-trans isomerase CYP21-2 OS=Arabidopsis thaliana OX=3702 GN=CYP21-2 PE=2 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.0e-76 Identity = 139/193 (72.02%), Postives = 160/193 (82.90%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy Swiss-Prot
Match: Q9TW32 (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum OX=44689 GN=cypB PE=1 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 9.3e-70 Identity = 126/181 (69.61%), Postives = 146/181 (80.66%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy Swiss-Prot
Match: P52015 (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans OX=6239 GN=cyn-7 PE=1 SV=2) HSP 1 Score: 256.9 bits (655), Expect = 1.9e-67 Identity = 121/177 (68.36%), Postives = 142/177 (80.23%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy TrEMBL
Match: A0A1S3CKJ5 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103502021 PE=3 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 8.4e-98 Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy TrEMBL
Match: A0A6J1KY88 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111499824 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.2e-97 Identity = 181/193 (93.78%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy TrEMBL
Match: A0A0A0KH44 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G185300 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 7.1e-97 Identity = 181/193 (93.78%), Postives = 182/193 (94.30%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy TrEMBL
Match: A0A6J1G8P2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111451864 PE=3 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 9.2e-97 Identity = 180/193 (93.26%), Postives = 181/193 (93.78%), Query Frame = 0
BLAST of ClCG02G019540 vs. ExPASy TrEMBL
Match: A0A5D2P5W9 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium tomentosum OX=34277 GN=ES332_A09G109200v1 PE=3 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.6e-93 Identity = 174/194 (89.69%), Postives = 181/194 (93.30%), Query Frame = 0
BLAST of ClCG02G019540 vs. TAIR 10
Match: AT5G58710.1 (rotamase CYP 7 ) HSP 1 Score: 332.4 bits (851), Expect = 2.6e-91 Identity = 161/193 (83.42%), Postives = 173/193 (89.64%), Query Frame = 0
BLAST of ClCG02G019540 vs. TAIR 10
Match: AT2G29960.1 (cyclophilin 5 ) HSP 1 Score: 329.7 bits (844), Expect = 1.7e-90 Identity = 160/190 (84.21%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of ClCG02G019540 vs. TAIR 10
Match: AT2G29960.2 (cyclophilin 5 ) HSP 1 Score: 307.8 bits (787), Expect = 6.8e-84 Identity = 153/190 (80.53%), Postives = 165/190 (86.84%), Query Frame = 0
BLAST of ClCG02G019540 vs. TAIR 10
Match: AT3G55920.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 287.7 bits (735), Expect = 7.3e-78 Identity = 139/193 (72.02%), Postives = 160/193 (82.90%), Query Frame = 0
BLAST of ClCG02G019540 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 ) HSP 1 Score: 241.9 bits (616), Expect = 4.6e-64 Identity = 116/177 (65.54%), Postives = 135/177 (76.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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