ClCG02G016910 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G016910
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	VQ domain-containing protein
Location	CG_Chr02: 31414544 .. 31420000 (+)
RNA-Seq Expression	ClCG02G016910
Synteny	ClCG02G016910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGTGCGGAGAGAATCGATACAACAACCAAAACCAAAGCCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCGACTCCGATGCCCTGGCTCACCGGAGAAACCACAAATCGCCTTCCGTTGGCACCCCAACTCCATCTTCAACGTTTTATGCAGATCATGAAATGGAAGTTTTGAAGTTCTCAGATGGCATGGCGTCGCTCCTCCAATTTGATGATCAAGGTTGTTTTGCAACACACAATAATAATATTCTTCCCAACAACATTATGGGATTTCAATCTTCTTGTTTTTTTCAATAGAATATGTACGAGGTTGTCGTTGTTGGATTTTGTTGGCAATTATAGGAAATTATGCATAAAAACTCTGCAAATTTTCAAGCTTCACAAGCTACGTTGAGTATATTTATCTTTTTATTTATTTATTTATTACAAACTTGCTTATATCTATTAGGATTAAATGGTTGTATAGACATTTTTTTGAAAAAGTAAATGGTTGTATACACATGTTTTATAACTATTTGGATGTGTGTGTTTTTTTTCTTCCTATTTTTAAAAATATAATTTATAAACAACTACTTTCACTTTTTTCCCCTACATTTTATGAATGTTTGGTTTTTTATTTTTTATTTTTGACTTTTGAAAATTTAGTTTATAAAACATTTTTTTTTAATTTTCTTATTATTTACTATTTATCTTTTAGGAGTGTTTTAGAAAACCAAAAGAAGTTTTGAAAAAAAAAACTTTTAGAAAGTGGTTTTGATGAAAATCATAGTAAAAAAATAGTAAGAAAGAAAGGATAAATTTTAAAAATAAAAATACCCAAAATGATAAAAAGATTATCCAACCGGACGTTAGTATTTAAAAACTTTTTTTAAGAAACTCCTAAATTAATATAATTTGAAAACCGACACTTTAATATCGTCTTTGATATGTATTTTGTTCAGTAATTTATTAAAAATTAATGATGCGTAAAAAATGATTTTTTTTTATTCTAATTTTAGAGAGACAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAAAACATTACGTTTAGAATCAAGATAGATATCAAAATTAAACACCAATTTTTGTAGGTCTATATAATAAGATAGAGTTTTAACAATATGTAGAGTTGGAGAGATCAACCTTTTAACCTGTATTTGGTTGACAGTATATATATGTTTGAACTAGTTATATGCTTTGTTGGGTGAATCAAATTCTAATAATACTTATTTATTTCTTAATTCTAACTATTATATTCTTCCACAAATTTGAGTTTTGAGCTAAAAGACCACCTCTCATTGAACCACAGTTTTCTTTTTTTTTTTGGATTTTCTTTTTTTTTTCTTTTGGATTTTTTCTGTCTTAAATGTGGATGAATATCCAATTTTTAGTCAAGTCATTTTAAGGAAGAATATCTAATAAACTAATCTACAAAATCTTTATTACTTGTCAATTCAAGTAGAGTTGAATTGGATTACCCAAATATTATGTTGAACTGAAAGTAAAAAAAAAAAAACCTTGTCACTTGGTTTGGATGAGGACAACAGCACAATATTAAGATTAGGACGATTACTTTAAAAAATACAAATACAAAACATATATAAAAGTCCTTTTCTCTAATTGTTAAACAAAGTCCTTAACCTTTCAATTACAATATTTCAGTCAAACTATGTCATCCTTTTCATTTTTTCTTCAATTAGTCCAGACAATTTTTTTTTCTCTAAAATATCAATTTGTACTCCAAAATTTTAGGGTTGTATTAATAATTATATCAGGTTAAATCGTGAACTTTTGTAAGTGTATTAGTTTAGACCCTGTATTACGCTTCGTTTAGATAAACATCATGTGAGAGTTATATTTTTATCAATTAAAGTACTAAACTTTCATAACGAATGAATTTTTATACTTTTCCTTTTAAAATTGTCCAATACATCAATTCTAACGTACATTTTGTTTATCCAATATTTTATGAAATAATATTTTTCAAATATAGTTCTAACAAAGGTTTTAAATAGATTCACTTGTAACAATTTAGAAGTTAAATTGAAAAACATCAAATGTCTCACACAATATTATTCTTTAAATTAATATATGAAGAAGGGGTTAATTGATATTTTTATGAAAATTCACTTTAAATTGGTCTAGCAAGGTACATTGAAAATTTTCCTTTTTTTTTCTTCGAAGAATCAATATTAGCATAAAAACTATATATTTTATCTTAATTCTTAATTTGGAAGAATGATTTAATTTACTTCTATTTTTTAATTAATTAATTTTAAATTTATTGTTATGGGTGAAAAATAAATGTTTATTTGGCTAAGTATATGGCAATCGACCCATAAGGTCAGCTTAAAGCCATACATTTATTTGGCTAAGTATGGAAACATACCTATAAAGTTGACTAGTATGGAGGCTGGCCCATGCATAGGGTCAACCAAAAGGGCCAAAGATATCAACTCTACAAGTTGGGTCAAAAGTTCAATGAACATCATGAAGGCCGACTCATATGATTGGTGATGATGGCCAAATTATGTCCAAGTGTTTGTCTTAGGCCAACTACACATGTTTGGATTCACTAATGATACTATTTGTAACGACTAAATTAAAGTAACGGTCAAATTAATTATTCAAGAGATTAATTAGCCAAGTGACCATTATAAAACCAAATTTCTATATAATCAAAAGGACTCGAGACATTTTGAGTTACATTGAAATACATCCCAAATTCTTTACTCTATAGCTCTCCAAGGGATTGTTGACTTGATCGTTGGAGTGTTGGTGGCCAAACACCACATTGGTGTGAGTTTTTCCTTTGTTGTGGAGGGTGATTGTTCAATTCCTCTCGAAAGTTACAAATTCACAATTTGAACCAAATTTTGGTATCAACATTTATTATCAAGTAATTTATTTAACAACATTTTATTATCAAGTCTAAATTAATTGTTTTGAATGGAAGAGTGGCTGAAAATATTTTCAAATATAGAAAAAAAAAAAATCAAAACGAAACCATTTTTTTTTTCAAATTGATAGATAATGATAAACTATTATGATTCATCAGTGATAGATAGTGACTTTTATCAATATTTAGACTACTTTTTATTATTTTGTTATATTTATAAATAAGTTGAACTATTTTTTTAGATATAAAAACAATCATTTATTTTATTTAAAAAATCCTCAACAGACAGAAAGAAAAAGTCAAACACAGAGAGAATGATCACAAAAGAACTATTTTTCATTGGTTTATAAGCAAACTATGTGAATATAACCATTAAACAATATACACATCTCAAAGAAACTAAAGTACAAAATCATTCTATGTAACGACCCAAATCCTTGAGGTAAATTCTCTTAGTAGATTAAATTAAGTAATTATACATAAAAAGGGAATCATAATTATTTATATGCATTATTGTATTTACTTAAGTTAAATAGGAAAGTTCCAAAGATTTTATTTACGGTGGTTAGAGAATTGAAGGTGGAATTAAGGAAAATGTTAGACTTTTGGTAAAGAATAATTTATTCTTATTTTATTTTAGGGCAAATAGAATAAAATAAATATTTTGGTGGAATAAAGTATATTATTTTACCTTAATTGGTTAAAAGGGAAAATTGGGAAAAATTAGGGTTTAAGGAGGGGGAGGGATTACCTCGTTTTCCGTGCAGTCAAAAAGAAAAAAAAAAAAGAAAAGAAAATAATCATCTCTCTCTCCGCCGCATCTCTCGCTCTCCCCTTCCTTTCCCTTTCGCCGTCGCCAACCTCCTTCTGCCCCGACACCTCTCTCTCTCGCTCTCCTTCAGTTCCCGTGAGCTCCCAATTGTTTCACGCGAAGAGTGTCGCTGATTCACGTTGCTGTCGCCAGAGTGTCGCTGTCGCGTTGAAGGGTATCGTTCTCTCGCTGCGTATCGCTTCCCCCGGATTCACATTGTCCCGCTCTCCCTCGGCCAGGCATTCACGCTATCGGGCTCTCGTGGTATCGCTATCTCGCTCTCCCGCTGTCTTGTGCTCTCGCTCTCTCGCTCTCCCGCTCGACTCACGCTTTCCCGGCGCCCAGTGTCGCCGCAGCCTCGTGGTATCACTCTCTCGCCGGTTTCGCTGTCTCGGCTCTCGCTCAAGTCTCGCTTCTCGCTCGAGAGTCATTTTCTCTCGGATTTTTGGCTCTCAGCAGCGGTTCCCTTCTTGTCCGGCCAGAACAGTACCTTAAGTGAGTGTCTCAAACTCGAATGAATTAGTTGCTTATGTTTTGGATGGAGATTTGAGAATTTCGAACTTTGTTGGGTATATCTCAATAGGTGTTCGGTAATTGCTTTAGTCCGTAGGATCGGGGGAAGCTACGAGTTGGATCGCGTTCGGGTAAGGACTCTCTCGGACAAATAATTTTAGGTTACCCATGATAAACTAGACCTGTAGACTAACTTAAATTGGGGGAAATTTTATTCCCGGTTCATTCAGGAATTGTTACAAGAGGAGCAGTGTAGTAATTTATGGATCGATCACCAGGTAAGTGATCTTACTACCTGAACCGCCTTCGGGCCACACGTTTAGTTGCCATGAAGTAGGAAATTTCCAAAGCTTTTATGATTTAGCATGCTTGTATGAGATCCCCATGCGTAAAGGTAGAAATTATCAAAGTCCTTATGATATAACATGCTTGTATGAGATTTCCATGCTTAAAAGTAGAAATTTCCAAGGCCTTTATGATATAGCATACTTGCATGAGATTACCATGTCCTAAGTTGTATGTGGTTATTAATGTATGACCCTATGCCATGTTATGTGATGAACAATATAGTATTTTAATGTATGAACCCATGGAATGGAATGAGCATGAATATGACTGTTTATGTTCTATTAGTAGAGTTACCTCCCCTATATTGGTTGGGTGTTCATAGGAGGTTGTGTACCTTCGGGTCCACAGGAGGTTGTGTTCCTTCGGGATCACTAGAGGATGTGTACCTTCGGGTTCACTAGAGGTTGTGTTCCTTCGGGTTCACAGGAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTGTGCTCTTTCGAGTACATTAGAGGTTTGTGTTCCTTCGGGATCACCAGAGGTAAGAGTTTCCTTCGGGGCTCTAGAGGTTTGTGGACATCCATAACCAACTGTAGGGTGAGTGTAAACTTTTCCCAATGAAAGTATGTTAGATATGTATGCCTTATGTTGATGCACTTAAAGGACTTAGGTGCTTAGCCCGACTCCAGGTAGTGGGGTCACTTACTGAGTAAATTAATTACTCATCATTTCATCTTATATGTTTTTCAGGTAAGGGAAAGAACATGGTGGCGAATGACAAGAAGAATCCTTGAGGGCATCACGGGACCCGTAGTAGCTTCCGCTTAG

mRNA sequence

ATGGGAAAGTGCGGAGAGAATCGATACAACAACCAAAACCAAAGCCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCGACTCCGATGCCCTGGCTCACCGGAGAAACCACAAATCGCCTTCCGTTGGCACCCCAACTCCATCTTCAACGTTTTATGCAGATCATGAAATGGAAGTTTTGAAGTTCTCAGATGGCATGGCGTCGCTCCTCCAATTTGATGATCAAGAGTGTCGCTGTCGCGTTGAAGGGTATCGTTCTCTCGCTGCGTATCGCTTCCCCCGGATTCACATTGTCCCGCTCTCCCTCGGCCAGGCATTCACGCTATCGGGCTCTCGTGGTATCGCTATCTCGCTCTCCCGCTGTCTTGTGCTCTCGCTCTCTCGCTCTCCCGCTCGACTCACGCTTTCCCGGCGCCCAGTGTCGCCGCAGCCTCGTGGTATCACTCTCTCGCCGGTTTCGCTGTCTCGGCTCTCGCTCAAGTCTCGCTTCTCGCTCGAGAGTCATTTTCTCTCGGATTTTTGGCTCTCAGCAGCGGTTCCCTTCTTGTCCGGCCAGAACAGTACCTTAATCCGTAGGATCGGGGGAAGCTACGAGTTGGATCGCGTTCGGGAATTGTTACAAGAGGAGCAGTGTAGTAATTTATGGATCGATCACCAGGAGGTTGTGTACCTTCGGGTCCACAGGAGGTTGTGTTCCTTCGGGATCACTAGAGGATGTGTACCTTCGGGTTCACTAGAGGTTGTGTTCCTTCGGGTTCACAGGAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTGTGCTCTTTCGAGTACATTAGAGGTTTGTGTTCCTTCGGGATCACCAGAGGTAAGAGTTTCCTTCGGGGCTCTAGAGGTAAGGGAAAGAACATGGTGGCGAATGACAAGAAGAATCCTTGAGGGCATCACGGGACCCGTAGTAGCTTCCGCTTAG

Coding sequence (CDS)

ATGGGAAAGTGCGGAGAGAATCGATACAACAACCAAAACCAAAGCCAAAACCCTACAAAAGTTCAAAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGATCAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAACTCACTGGCTTCGACTCCGATGCCCTGGCTCACCGGAGAAACCACAAATCGCCTTCCGTTGGCACCCCAACTCCATCTTCAACGTTTTATGCAGATCATGAAATGGAAGTTTTGAAGTTCTCAGATGGCATGGCGTCGCTCCTCCAATTTGATGATCAAGAGTGTCGCTGTCGCGTTGAAGGGTATCGTTCTCTCGCTGCGTATCGCTTCCCCCGGATTCACATTGTCCCGCTCTCCCTCGGCCAGGCATTCACGCTATCGGGCTCTCGTGGTATCGCTATCTCGCTCTCCCGCTGTCTTGTGCTCTCGCTCTCTCGCTCTCCCGCTCGACTCACGCTTTCCCGGCGCCCAGTGTCGCCGCAGCCTCGTGGTATCACTCTCTCGCCGGTTTCGCTGTCTCGGCTCTCGCTCAAGTCTCGCTTCTCGCTCGAGAGTCATTTTCTCTCGGATTTTTGGCTCTCAGCAGCGGTTCCCTTCTTGTCCGGCCAGAACAGTACCTTAATCCGTAGGATCGGGGGAAGCTACGAGTTGGATCGCGTTCGGGAATTGTTACAAGAGGAGCAGTGTAGTAATTTATGGATCGATCACCAGGAGGTTGTGTACCTTCGGGTCCACAGGAGGTTGTGTTCCTTCGGGATCACTAGAGGATGTGTACCTTCGGGTTCACTAGAGGTTGTGTTCCTTCGGGTTCACAGGAGGTTGTGTTCCTTCGGGTTCACCAGAGGTTGTGCTCTTTCGAGTACATTAGAGGTTTGTGTTCCTTCGGGATCACCAGAGGTAAGAGTTTCCTTCGGGGCTCTAGAGGTAAGGGAAAGAACATGGTGGCGAATGACAAGAAGAATCCTTGAGGGCATCACGGGACCCGTAGTAGCTTCCGCTTAG

Protein sequence

MGKCGENRYNNQNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSDALAHRRNHKSPSVGTPTPSSTFYADHEMEVLKFSDGMASLLQFDDQECRCRVEGYRSLAAYRFPRIHIVPLSLGQAFTLSGSRGIAISLSRCLVLSLSRSPARLTLSRRPVSPQPRGITLSPVSLSRLSLKSRFSLESHFLSDFWLSAAVPFLSGQNSTLIRRIGGSYELDRVRELLQEEQCSNLWIDHQEVVYLRVHRRLCSFGITRGCVPSGSLEVVFLRVHRRLCSFGFTRGCALSSTLEVCVPSGSPEVRVSFGALEVRERTWWRMTRRILEGITGPVVASA

Homology

[Close]

BLAST of ClCG02G016910 vs. NCBI nr
Match: KGN60779.1 (hypothetical protein Csa_019238 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-30
Identity = 83/115 (72.17%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MGKCGENRYNN------QNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG 60
           MGKCGEN+Y N      Q+Q+QNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG
Sbjct: 1   MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG 60

Query: 61  FDSDALAHRRNHKSPSVGTPTPSSTFYAD-HEMEVLKFSDG--MASLLQFDDQEC 107
           FDS+    RRN K  S    TPS+ F+AD HEMEVLKFSD   M SLLQFD Q C
Sbjct: 61  FDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC 115

[Close]

BLAST of ClCG02G016910 vs. NCBI nr
Match: KAG6599333.1 (hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-30
Identity = 75/107 (70.09%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 1   MGKCGENRYNNQNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSDAL 60
           MGKCGEN + +Q QSQNPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S + 
Sbjct: 1   MGKCGENEWKDQKQSQNPTKVQRKPIKVKYISSPMMIKASNAHEFRAIVQQLTGFTSHSP 60

Query: 61  AHRRNHKSPSVGTPTPS-STFYADHEMEVLKFSDGMASLLQFDDQEC 107
             R NHK P     TPS ST +A+ +ME LK SD M+SLL+FDD+ C
Sbjct: 61  TRRSNHKPPPHAAQTPSTSTLHANPQMEALKLSDNMSSLLEFDDEAC 107

[Close]

BLAST of ClCG02G016910 vs. NCBI nr
Match: KAA0063578.1 (hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 7.2e-16
Identity = 55/74 (74.32%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 35  MMIKASNALEFRAIVQQLTGFDSDAL-AHRRNHKSPSVGTPTPSSTFYADHEMEVLKFSD 94
           MMIKAS+ALEFRAIVQQLTGFDS++    RRN KS S    TPSS F+AD EMEVLKFSD
Sbjct: 1   MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSD 60

Query: 95  G-MASLLQFDDQEC 107
             MASLLQFDDQ C
Sbjct: 61  DHMASLLQFDDQGC 74

[Close]

BLAST of ClCG02G016910 vs. NCBI nr
Match: XP_021282108.1 (uncharacterized protein LOC110414990 [Herrania umbratica])

HSP 1 Score: 70.9 bits (172), Expect = 2.5e-08
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 1  MGKCGENRYNNQNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSD 59
          MGK  ++R    ++S+NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +SD
Sbjct: 20 MGKLRDHRC---HKSKNPTKAKKNPIKIKYISSPMMVKASNADEFRAIVQELTGRNSD 74

[Close]

BLAST of ClCG02G016910 vs. NCBI nr
Match: KAF3969566.1 (hypothetical protein CMV_006646 [Castanea mollissima])

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-07
Identity = 35/57 (61.40%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 6  ENRYNNQ-NQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSDALA 62
          +N Y NQ  +S + TKV+RKP+KVKYISSP+M+KA N  EFRAIVQQLTG ++D ++
Sbjct: 9  DNHYQNQPKRSPDSTKVERKPMKVKYISSPIMVKAGNPSEFRAIVQQLTGKNADPIS 65

[Close]

BLAST of ClCG02G016910 vs. ExPASy TrEMBL
Match: A0A0A0LIA7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010150 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.6e-31
Identity = 83/115 (72.17%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MGKCGENRYNN------QNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG 60
           MGKCGEN+Y N      Q+Q+QNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG
Sbjct: 1   MGKCGENQYTNHNHSQSQSQNQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTG 60

Query: 61  FDSDALAHRRNHKSPSVGTPTPSSTFYAD-HEMEVLKFSDG--MASLLQFDDQEC 107
           FDS+    RRN K  S    TPS+ F+AD HEMEVLKFSD   M SLLQFD Q C
Sbjct: 61  FDSNTPTRRRNQKLLSDCARTPSAMFHADRHEMEVLKFSDDHHMESLLQFDGQGC 115

[Close]

BLAST of ClCG02G016910 vs. ExPASy TrEMBL
Match: A0A5A7V7M1 (VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00880 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-16
Identity = 55/74 (74.32%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 35  MMIKASNALEFRAIVQQLTGFDSDAL-AHRRNHKSPSVGTPTPSSTFYADHEMEVLKFSD 94
           MMIKAS+ALEFRAIVQQLTGFDS++    RRN KS S    TPSS F+AD EMEVLKFSD
Sbjct: 1   MMIKASSALEFRAIVQQLTGFDSNSTPTRRRNQKSVSDCARTPSSMFHADREMEVLKFSD 60

Query: 95  G-MASLLQFDDQEC 107
             MASLLQFDDQ C
Sbjct: 61  DHMASLLQFDDQGC 74

[Close]

BLAST of ClCG02G016910 vs. ExPASy TrEMBL
Match: A0A6J1A533 (uncharacterized protein LOC110414990 OS=Herrania umbratica OX=108875 GN=LOC110414990 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-08
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 1  MGKCGENRYNNQNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSD 59
          MGK  ++R    ++S+NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG +SD
Sbjct: 20 MGKLRDHRC---HKSKNPTKAKKNPIKIKYISSPMMVKASNADEFRAIVQELTGRNSD 74

[Close]

BLAST of ClCG02G016910 vs. ExPASy TrEMBL
Match: A0A2P5BBD6 (VQ motif containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_253950 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-07
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0


Query: 11 NQNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSD 59
          N  + Q P K ++KPIK+KYISSPMM++A NA EFRAIVQQLTG +SD
Sbjct: 3  NSLKRQKPNKAKKKPIKIKYISSPMMVQAKNASEFRAIVQQLTGKNSD 50

[Close]

BLAST of ClCG02G016910 vs. ExPASy TrEMBL
Match: A0A6A1UKY6 (VQ domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006185 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-07
Identity = 30/53 (56.60%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 7  NRY-NNQNQSQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFDSD 59
          N Y ++++Q+QNPTK +++P+K+KYISSP  ++ASN +EFRAIVQ+LTG +S+
Sbjct: 9  NHYLHHRDQTQNPTKAKQEPVKIKYISSPTFVRASNPIEFRAIVQELTGQNSE 61

The following BLAST results are available for this feature:

BLAST of ClCG02G016910 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60779.1	1.4e-30	72.17	hypothetical protein Csa_019238 [Cucumis sativus]	[more]
KAG6599333.1	2.3e-30	70.09	hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0063578.1	7.2e-16	74.32	hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]	[more]
XP_021282108.1	2.5e-08	63.79	uncharacterized protein LOC110414990 [Herrania umbratica]	[more]
KAF3969566.1	1.6e-07	61.40	hypothetical protein CMV_006646 [Castanea mollissima]	[more]

BLAST of ClCG02G016910 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G016910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIA7	6.6e-31	72.17	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010150 PE=4 SV=...	[more]
A0A5A7V7M1	3.5e-16	74.32	VQ domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A6J1A533	1.2e-08	63.79	uncharacterized protein LOC110414990 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]
A0A2P5BBD6	3.9e-07	66.67	VQ motif containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_25395...	[more]
A0A6A1UKY6	8.6e-07	56.60	VQ domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006185 PE=4...	[more]

BLAST of ClCG02G016910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 31..58 e-value: 2.4E-8 score: 33.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR33624:SF17	VQ MOTIF PROTEIN	coord: 10..88
IPR039335	Sigma factor binding protein 1/2	PANTHER	PTHR33624	SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC	coord: 10..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G016910.2	ClCG02G016910.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051091	positive regulation of DNA-binding transcription factor activity