
ClCG02G015960 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCAAGTCTCGCATTGTTTCTTCTCTTTTTCTCTCTTTCCCTCCCGCCTCTAAATTCATAGAACCAATTTCCAGACTGCTGAACAAACTGCTGAACAATTGGGTGAAATCAAACAAAGAAACCAATTCAAAAATGCATTCATTTGGGTTTAGAGCCAACGCTTTGCTGACCTTCGCGGCTACCATACTCGCCGTCATTTGTGCTATGGCTTCCTTCTCCGATACCCTCAATTCGCCTTCGCCTACAGCACAAGTTCAGGTCTCTCTTCTTGTTTCCTCTCTTTCTGGGTTTTTTCCCCTTCCCTTTTAGATCTGTGGATTGAATTCTCTTGGATTTTTTGTTGGATTTCGAGACCCATTTGGTGATTTGATTTGGGTTTTCTTGTTTTTGTGTCTTAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAACGGAAACGACGAGGTACGATCTCATGGGTTTTATGTTAGATTACGCCTGTTTCTTTTCTATTGAGTTCGTGGAAATTTGTGTGAGAAGTGGGATTTTGAGGTTTAATTATATAGTGCATTTCAGTTTTAGGGTCTTTTTTTTCTTTTGTACTACATGATTTGTAAATTGATGTGATGAAATGGGACATTTGTGTATTTGAAAATTATGAAAAATATCTGGGGAAAAGACCCAAGTTGGTTATTGGAGGAGATGTAGCCTAGAAGATTAGAGCACGTATCTATGAATGATGACTTGGTTGTTCCTTGTTTGAATCCTTTCTCGCCCACAGCCAGCCAAAAAAGGAAGATTTTTCCCTTGAGCGTATGAAAATCATGGTAGGGGGAACTTATCTGAGCTTTCATCCTCTTAGGATTAAGATTAGTTCCATGTTTTACTTGGCGATTTAGTTCTTGTTTTTTCAAGCATGGGATTTTGCTGTTTTTTTTAAGAGACAAAAGAATATGTTGATGAAGAAAGATCATATGAAATGGTAGCCCTGCAAAAAGATTACAAGAAAGACTTTCGATAAGCCAAAATATGAACAAAAGCATAACTACAAAAAGATGTAGAGAGAGAACACCAGATGGATGCAAAAAGTTTAATGGAGTCCCAAAGCTCTTCGAGGCTAATCACCTGCTTGTTGAAGATCTTGTGGTTCCTCTCAAGCTAGAACTTCCACAGCATTGCCATGCGTAGACCAAAGAACTATGACCTTTCTCCTGAAAGGAGTACCGAAAATGAATTGAAACAAAGCCTCTTCATTCCTTCTAGGGAAGCACCAGCTTAGCCTGAACAGACTTTAAAATATTTTGCTGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTCTTTTTTTTCTTTTTTTTTTTGTTTTTTTCTTTTTTTTTTTTTTTTAATTTTAATATAGGAAACAATAATTTGCTGGTTTTTTAATCCAATCAAATGTTGTTTCTTCTTATCTGATGGAAAGTCATGTTTCTCTTAGATAAATGATGGTGGGTTGGCTGTAATCTTGATTAGGGGTTTTGCAATTTCATTAAGAGTTTACTTTTAACTATTAGTCATTTGAAATCTAAGCTAGATTGGTTACTTGATGGATTTTTAGATACACAAATCATGAATTTTAAAGTATATGAAGAGCAATTTATTAAATACATCAAGTATATGCATGAATATTTTGAGAAATTAAAGATCCCATGGGATAGTATAATGAAGGGGTCTTTTTCACTCACACATAAGCGAGAAAGTGATCAAGGAAAATTATAATTAAAAGAGGACTTTTCTTTTTGTTGAGTTCTTGGAAAGAATAGTTTTCTTTTGTTTGAACGTATAAGTGTGAGATTGAGTATGAATATTTTTTTTGGAGCTGATAAACTTCCAACAAATTTCTCCCTGAAACTAAACTTCCAACAAAATTATCCCTTAGCGAAACTTCCATGGCTCCATCATCTTCATGAACAATTCATTTTTCAAGGCTTTTGATGAATATGTATGCAATCTCATCTCCTACCTTACAGCAGTACTGAGTAATTATTTCTCTATTTATGATCAGATTTCTAAGGAAATTATATTTGATTTTTATGTGATTATTCCCTTGATGAAAAGGTGGACTCTGTGTGAGAGCGATTGGCAAGCTTATTATCCCCGAAACAATGTAATCCCTTTTTCTTGAAGGACACTTTAGTTCTTCAGAAGCACTTTGGTCAACCAAAGTGCTTGATAAGGAACTGAAGAAAAAAAATCAATTTTTTTCGTTGATGGGCACAAAGCAGATTCTTTGCAAGAGGATTGATGAGTTCTTAATATCATAAAACAATGCAATCACTTTTTCCTGATTATTTGAAACAATGCTTCTTTTTGCAGGTTAGCATGACTTTGAACATATCAGCGGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTGCAGTGGCAACCTATTTTCCTCTTAGACAGTCTGGTTGGTTAATTATGGTGGTTATAAATAATGAGTTGATAAAACGTGTTTGTTTATTCACACTGAGTGATCGATACATAGTTGAGGAAGAATTCAAGCTAAAACTTCACCCAGAAAATACCGCCCCTATCATAATGTTTTTTGCTACGTACTCTCTTGACTCGCTCCCTCCCACCAATCTGACTGACTAGTGACTAGTTACATTAAGGGCCAGCCCACTCCTACGTTTATGCTAAATGCTAAGCCATTTTCCGCTTGCTTTCTTACTTCTATATACTCTTAACTATCCGCCATCGAGGTTCTATTATAAAACTCATAAAAATTTTCATAATGGCTGAAGTTAATAGCGTTTAGAATAGCCGGACATCCAGTTTGCATAGGGTGGTCATTGTGGCTTCCAGCCTCTATTTGTGTTATTCTGTGTACTATGTCGGTCAAGTTAATTACATTGTGTTAGGAACCAAGGTAGTATTGATTACCTTTGTCCTATATCATTTAGAATGAGTTGACCAATATGGTACTTTTGTGGTTTGGCTCTCTCACCTCACTAGCTAGCTTTTGGTGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACACATTGTTGGGAATCTATGTTTATATTCATATTTCATGAACTATTATAGAACCTTTCTTTCTTGAGATTTGTCAGTGTTATAATAATCTTCATTTTAAATTAATCTCTTTCTGAAACACAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAACGAACTCCTTGAATCAGGTGAGTTTCTGCTCGTCTCTTTTGGTGTCTTGACTTGCCTTGGATTTTTGCCTTTCTCATGATTGAAATCACAGAAATTTTACATATTTCATGACATGGGGCTTCTTTAGTCCTTCTGTATGTGCATACATTTACTTCAATTTAATCCCTTCCTGAAATGTTGTTTGCAGATTTCACTTTGGGACGGTATCGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACTTCAAACAAGTATCGGTTCGTTGATCAGGTTTGTCCTTCAACCTGTTTATGATGATGATAAGTTTTAGTCAAGAGTGACTAAGTTGTATTTCTCCTTATGCAGGGAAGCAATCTGAGAGGTAAAAAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAAATGTTTGCAGATAAATTGGTGATGTCTGGATACCGGTTGCCACAAGAATATAGATGAGAAAATTTCTCCATTGATTGTAATTTCTGAACTAAACCTTACCATAGGCTTTAGCATCAGCAGCTTAATCAACAACATTACAAACACTGAACATTTCATGAATGGAATAGTAAGAGGAGGAATTTTGGTGTATGGAATTTTTCATGAATTCTTCAGGCTTTTAAATGAATTGATATAATACAGTTGGTTTTATTTTTTTCTCA TTTCCAAGTCTCGCATTGTTTCTTCTCTTTTTCTCTCTTTCCCTCCCGCCTCTAAATTCATAGAACCAATTTCCAGACTGCTGAACAAACTGCTGAACAATTGGGTGAAATCAAACAAAGAAACCAATTCAAAAATGCATTCATTTGGGTTTAGAGCCAACGCTTTGCTGACCTTCGCGGCTACCATACTCGCCGTCATTTGTGCTATGGCTTCCTTCTCCGATACCCTCAATTCGCCTTCGCCTACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAACGGAAACGACGAGGTACGATCTCATGGGTTTTATGTTAGCATGACTTTGAACATATCAGCGGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAACGAACTCCTTGAATCAGGTGAGTTTCTGCTCGTCTCTTTTGTCCTTCTGTATGTGCATACATTTACTTCAATTTAATCCCTTCCTGAAATGTTGTTTGCAGATTTCACTTTGGGACGGTATCGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACTTCAAACAAGTATCGGTTCGTTGATCAGGGAAGCAATCTGAGAGGTAAAAAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAAATGTTTGCAGATAAATTGGTGATGTCTGGATACCGGTTGCCACAAGAATATAGATGAGAAAATTTCTCCATTGATTGTAATTTCTGAACTAAACCTTACCATAGGCTTTAGCATCAGCAGCTTAATCAACAACATTACAAACACTGAACATTTCATGAATGGAATAGTAAGAGGAGGAATTTTGGTGTATGGAATTTTTCATGAATTCTTCAGGCTTTTAAATGAATTGATATAATACAGTTGGTTTTATTTTTTTCTCA ATGCATTCATTTGGGTTTAGAGCCAACGCTTTGCTGACCTTCGCGGCTACCATACTCGCCGTCATTTGTGCTATGGCTTCCTTCTCCGATACCCTCAATTCGCCTTCGCCTACAGCACAAGTTCAGGTTTTGAGCATCAACTGGTTTCAAAATCAACCCAACGGAAACGACGAGGTACGATCTCATGGGTTTTATGTTAGCATGACTTTGAACATATCAGCGGACTTGCAGTCATTATTTACATGGAATACAAAGCAGGTTTTTGTGTTTCTTGCTGCTGAATATGAAACCCCAACGAACTCCTTGAATCAGGTGAGTTTCTGCTCGTCTCTTTTGTCCTTCTGTATGTGCATACATTTACTTCAATTTAATCCCTTCCTGAAATGTTGTTTGCAGATTTCACTTTGGGACGGTATCGTACCTTCCAAAGAGATTGCAAAGTTTCAAATCCATACTTCAAACAAGTATCGGTTCGTTGATCAGGGAAGCAATCTGAGAGGTAAAAAGTTTAACTTGACATTGCATTGGCATGTGATGCCAAAGACAGGCAAAATGTTTGCAGATAAATTGGTGATGTCTGGATACCGGTTGCCACAAGAATATAGATGA MHSFGFRANALLTFAATILAVICAMASFSDTLNSPSPTAQVQVLSINWFQNQPNGNDEVRSHGFYVSMTLNISADLQSLFTWNTKQVFVFLAAEYETPTNSLNQVSFCSSLLSFCMCIHLLQFNPFLKCCLQISLWDGIVPSKEIAKFQIHTSNKYRFVDQGSNLRGKKFNLTLHWHVMPKTGKMFADKLVMSGYRLPQEYR Homology
BLAST of ClCG02G015960 vs. NCBI nr
Match: XP_008454895.1 (PREDICTED: signal peptidase complex subunit 3B [Cucumis melo] >AAO45754.1 signal peptidase protein-like protein [Cucumis melo subsp. melo] >KAA0047947.1 signal peptidase complex subunit 3B [Cucumis melo var. makuwa] >TYK18328.1 signal peptidase complex subunit 3B [Cucumis melo var. makuwa]) HSP 1 Score: 314.3 bits (804), Expect = 7.6e-82 Identity = 164/202 (81.19%), Postives = 167/202 (82.67%), Query Frame = 0
BLAST of ClCG02G015960 vs. NCBI nr
Match: XP_038888523.1 (signal peptidase complex subunit 3B-like [Benincasa hispida]) HSP 1 Score: 312.8 bits (800), Expect = 2.2e-81 Identity = 163/202 (80.69%), Postives = 165/202 (81.68%), Query Frame = 0
BLAST of ClCG02G015960 vs. NCBI nr
Match: XP_004139189.1 (signal peptidase complex subunit 3B [Cucumis sativus] >KAE8651592.1 hypothetical protein Csa_023454 [Cucumis sativus]) HSP 1 Score: 308.5 bits (789), Expect = 4.2e-80 Identity = 162/202 (80.20%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of ClCG02G015960 vs. NCBI nr
Match: XP_022946298.1 (signal peptidase complex subunit 3B [Cucurbita moschata] >XP_023545834.1 signal peptidase complex subunit 3B [Cucurbita pepo subsp. pepo] >KAG6599260.1 Signal peptidase complex subunit 3B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79 Identity = 159/202 (78.71%), Postives = 165/202 (81.68%), Query Frame = 0
BLAST of ClCG02G015960 vs. NCBI nr
Match: XP_022999140.1 (signal peptidase complex subunit 3B [Cucurbita maxima]) HSP 1 Score: 305.1 bits (780), Expect = 4.6e-79 Identity = 159/202 (78.71%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy Swiss-Prot
Match: Q53YF3 (Signal peptidase complex subunit 3B OS=Arabidopsis thaliana OX=3702 GN=At5g27430 PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67 Identity = 131/202 (64.85%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy Swiss-Prot
Match: Q9MA96 (Signal peptidase complex subunit 3A OS=Arabidopsis thaliana OX=3702 GN=At3g05230 PE=2 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 7.4e-64 Identity = 125/202 (61.88%), Postives = 147/202 (72.77%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy Swiss-Prot
Match: Q9LGB4 (Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0131800 PE=3 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27 Identity = 76/201 (37.81%), Postives = 90/201 (44.78%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy Swiss-Prot
Match: B0G180 (Signal peptidase complex subunit 3 OS=Dictyostelium discoideum OX=44689 GN=spcs3 PE=3 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-13 Identity = 50/201 (24.88%), Postives = 87/201 (43.28%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy Swiss-Prot
Match: P28687 (Signal peptidase complex subunit 3 OS=Gallus gallus OX=9031 GN=SPC22 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12 Identity = 53/179 (29.61%), Postives = 81/179 (45.25%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy TrEMBL
Match: A0A5A7U155 (Signal peptidase complex subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00390 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82 Identity = 164/202 (81.19%), Postives = 167/202 (82.67%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy TrEMBL
Match: Q84KA8 (Signal peptidase complex subunit 3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82 Identity = 164/202 (81.19%), Postives = 167/202 (82.67%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy TrEMBL
Match: A0A1S3BZ61 (Signal peptidase complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103495199 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82 Identity = 164/202 (81.19%), Postives = 167/202 (82.67%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy TrEMBL
Match: A0A6J1G3E6 (Signal peptidase complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111450422 PE=3 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 7.7e-80 Identity = 159/202 (78.71%), Postives = 165/202 (81.68%), Query Frame = 0
BLAST of ClCG02G015960 vs. ExPASy TrEMBL
Match: A0A6J1KEG9 (Signal peptidase complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111493612 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79 Identity = 159/202 (78.71%), Postives = 164/202 (81.19%), Query Frame = 0
BLAST of ClCG02G015960 vs. TAIR 10
Match: AT5G27430.1 (Signal peptidase subunit ) HSP 1 Score: 257.7 bits (657), Expect = 7.9e-69 Identity = 131/202 (64.85%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of ClCG02G015960 vs. TAIR 10
Match: AT3G05230.1 (Signal peptidase subunit ) HSP 1 Score: 245.0 bits (624), Expect = 5.3e-65 Identity = 125/202 (61.88%), Postives = 147/202 (72.77%), Query Frame = 0
BLAST of ClCG02G015960 vs. TAIR 10
Match: AT3G05230.2 (Signal peptidase subunit ) HSP 1 Score: 171.8 bits (434), Expect = 5.7e-43 Identity = 92/161 (57.14%), Postives = 112/161 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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