ClCG02G014690 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G014690
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111023284
Location	CG_Chr02: 29070249 .. 29072184 (-)
RNA-Seq Expression	ClCG02G014690
Synteny	ClCG02G014690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAGTGGAAGTCAATATTTTGGTCGTTTAGTTAAAAGATGATACTTGATAGTAGACCCACTTGAGCCAAATTTTAAGCATAAAAGTATTATGTTATATATTCCATATCCTAAACAGGAGAGAAATTATTTGTGCGTTTCCACAACACACCAATTAATCAATTTTTTTCTTTTCATTATCCAGAATAATAGCCCATCATGATGAAGCTATTCTTGAATAATAAATAAACAAAAAGGTCAATTAGCAGAAGAAGCAAAGGCATGGAAAGAGGAAAAAAAAGAAGAAAATTGCAAGAGGAAGAAGAAGAAGAAGAAGAGGGAAAGATGAAGTTGTTCTTTGCTTTGATTCAAAACACAAAAGCCATAAGAGACAGAATGAAATCAAAAGAATCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTGACCTTAATCTCTCTCTTTGAGGGTTTTTCTTTTCTTTTTTTTTTGGTAATTTACATGGTGTTTATGACGGGTTGCTCTTGATTTTTCTTTTTTTCCTACTTTTCTTAAATTACCAATGAACCAAAAGCAAATTTAATATCATATCCACAAGTGAAAATGGAAGATCAATATGAATTGAGTTTGAATACAAGATCTCTTGAACCAACCAGCTATGATACTATCTTAAATCGTCAATTGACTCAAAAATTGAAACTGCTGATGAGTGAAGACAAATTTAATATCATATCATATAACAACTTCTTTTTAAATCTCTATTTTTTCCCCTCAATTTTAGTTGGATTTTAATTTAAATAAATTAATTAATAAGATATTCATGTTTCCATTAATTTTCAAAGAAAATATAATTGTTTTTTCTCTTTTAAAATTTTGTTTGTGTATGATGTATTAAAAAAAAAAAAAATTTAAGTTCACTATTATACAAAATAAATAAATGTGGGCATGCTCAACTTTCTAATCTAAATGTTTTATTATAAATCGACGCAAAAATATACATATCATGTTTTGCAATAAATTGATAATCATCGAAAATTTAAATAATACAAAGTATATGGTCTAATGTGGGCGAACTTATATAAGTTGACGTCATTTAATTACATGAATTAGTTGGAATAAAACAATATTTGAAGGATTGAATTTACTATTATTTTTTATTTGCTTTGGGCCTGAAATGGTATTAAATACTACAAACTCTATATAATGGTTTTATATTTATTTTAATCAAGGTTATTGTTTTTTATTATACTAAATGTAATTTACTTCAATTAAAAAAATAATAATAATAAACAAAAATAATTAACAAACACATTTATATTTTTATTCTTTTTTTTTTCTCTATATAGAAATATGAAACATATATAGAAATATGAAAGATAAATAGTTATCAGATATGATATGTTTTGTTTGTAGTTTAGTTGTTATATATTACAAAATTTTGGACAAGTTACAATATTCTTTTTGTGATTTTTATCTTAAGTTTCTATGTTAAAAGTTCATTAGATTTGTAGTTTTGAGGAGTGAGTTAGATTTTGAGGTTACTTATGTGATTAAAGTTTCATTTGAAGTTTATTTGTATGATTAAAGTGTGGTTTTGATTGTTTTGAGTGTAAAGGTAGTGGATGTATGCGAAGAGAGATTGTGAACGTTAAGAATGTATGTATATCTTATGAATATTGTCATTATTGTCTACATTGATGTATTTGGTTGAATTCTAAAATGAATATTGTTTTTTACTAGGTCTTGCACAAATTCATTGAAGTGAGGAAAGTGTCAAGCAAGTAATTT

mRNA sequence

GGAAAGTGGAAGTCAATATTTTGGTCGTTTAGTTAAAAGATGATACTTGATAGTAGACCCACTTGAGCCAAATTTTAAGCATAAAAGTATTATGTTATATATTCCATATCCTAAACAGGAGAGAAATTATTTGTGCGTTTCCACAACACACCAATTAATCAATTTTTTTCTTTTCATTATCCAGAATAATAGCCCATCATGATGAAGCTATTCTTGAATAATAAATAAACAAAAAGGTCAATTAGCAGAAGAAGCAAAGGCATGGAAAGAGGAAAAAAAAGAAGAAAATTGCAAGAGGAAGAAGAAGAAGAAGAAGAGGGAAAGATGAAGTTGTTCTTTGCTTTGATTCAAAACACAAAAGCCATAAGAGACAGAATGAAATCAAAAGAATCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTCTTGCACAAATTCATTGAAGTGAGGAAAGTGTCAAGCAAGTAATTT

Coding sequence (CDS)

ATGGAAAGAGGAAAAAAAAGAAGAAAATTGCAAGAGGAAGAAGAAGAAGAAGAAGAGGGAAAGATGAAGTTGTTCTTTGCTTTGATTCAAAACACAAAAGCCATAAGAGACAGAATGAAATCAAAAGAATCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTCTTGCACAAATTCATTGAAGTGAGGAAAGTGTCAAGCAAGTAA

Protein sequence

MERGKKRRKLQEEEEEEEEGKMKLFFALIQNTKAIRDRMKSKESTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDKVLHKFIEVRKVSSK

Homology

[Close]

BLAST of ClCG02G014690 vs. NCBI nr
Match: XP_038889660.1 (protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 8.7e-30
Identity = 83/105 (79.05%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   MERGKKRRKLQEEEEE--EEEGKMKLFFALIQNTKAIRDRMKSKESTEEEKSKGVWNPKF 60
           MERG+KRRKL+EEEEE  +EEG+MKL FALIQN KA+R RMKSKES EEEKSKGVWNPKF
Sbjct: 1   MERGRKRRKLEEEEEEDDDEEGEMKLVFALIQNIKAMRGRMKSKESPEEEKSKGVWNPKF 60

Query: 61  QPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDK 104
           QPEDFIED G YNNKSNI LQL AASSS TK SN K+E+QE +DK
Sbjct: 61  QPEDFIED-GYYNNKSNITLQLPAASSSTTKHSNPKKEQQEQQDK 104

[Close]

BLAST of ClCG02G014690 vs. NCBI nr
Match: XP_038889662.1 (protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 8.7e-30
Identity = 83/105 (79.05%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   MERGKKRRKLQEEEEE--EEEGKMKLFFALIQNTKAIRDRMKSKESTEEEKSKGVWNPKF 60
           MERG+KRRKL+EEEEE  +EEG+MKL FALIQN KA+R RMKSKES EEEKSKGVWNPKF
Sbjct: 1   MERGRKRRKLEEEEEEDDDEEGEMKLVFALIQNIKAMRGRMKSKESPEEEKSKGVWNPKF 60

Query: 61  QPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDK 104
           QPEDFIED G YNNKSNI LQL AASSS TK SN K+E+QE +DK
Sbjct: 61  QPEDFIED-GYYNNKSNITLQLPAASSSTTKHSNPKKEQQEQQDK 104

[Close]

BLAST of ClCG02G014690 vs. NCBI nr
Match: XP_038889661.1 (protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 8.7e-30
Identity = 83/105 (79.05%), Postives = 91/105 (86.67%), Query Frame = 0


Query: 1   MERGKKRRKLQEEEEE--EEEGKMKLFFALIQNTKAIRDRMKSKESTEEEKSKGVWNPKF 60
           MERG+KRRKL+EEEEE  +EEG+MKL FALIQN KA+R RMKSKES EEEKSKGVWNPKF
Sbjct: 1   MERGRKRRKLEEEEEEDDDEEGEMKLVFALIQNIKAMRGRMKSKESPEEEKSKGVWNPKF 60

Query: 61  QPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDK 104
           QPEDFIED G YNNKSNI LQL AASSS TK SN K+E+QE +DK
Sbjct: 61  QPEDFIED-GYYNNKSNITLQLPAASSSTTKHSNPKKEQQEQQDK 104

[Close]

BLAST of ClCG02G014690 vs. NCBI nr
Match: KGN61024.1 (hypothetical protein Csa_021295 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 7.4e-29
Identity = 85/116 (73.28%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MERGKKRRKLQEEEEEEEEGKMKLFFALIQNTKAIRDRMK-SKESTEEEKSKGVWNPKFQ 60
           ME G+KRRKLQEEEEEEE+ KM+LF+ALIQNTKA+RD MK SKE TEEEKSKGVWNPKFQ
Sbjct: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60

Query: 61  PEDFIEDNG-NYNNKSN-INLQLAAASSSKTKQSNEKREEQEDKDKVLHKFIEVRK 114
           PEDF E++G NYNNKSN I LQL+AASSS TKQ NEK++++EDK    +K +EV+K
Sbjct: 61  PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKH---YKVVEVKK 113

[Close]

BLAST of ClCG02G014690 vs. NCBI nr
Match: KAG6599168.1 (hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.7 bits (278), Expect = 4.3e-21
Identity = 71/121 (58.68%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 1   MERGKKRRKLQ------------EEEEEEEEGKMKLFFALIQNTKAIRDRMKSKESTEEE 60
           ME G+KRRKLQ            E+E+E+EE KMKLFFALIQNTKA+RD++KSKES EE+
Sbjct: 1   MEGGRKRRKLQNIEEDDDDEEEDEDEDEDEEEKMKLFFALIQNTKAMRDKIKSKESAEED 60

Query: 61  K-SKGVWNPKFQPEDFIEDN-GNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDKVLH 108
             +KGVWNPKFQPEDFIED    + +KS   ++L AASSS TKQSN+K E QE ++   H
Sbjct: 61  NPTKGVWNPKFQPEDFIEDGFDTHKSKSKAAIELGAASSSATKQSNQKEEHQEHQEHQEH 120

[Close]

BLAST of ClCG02G014690 vs. ExPASy TrEMBL
Match: A0A0A0LJ23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.6e-29
Identity = 85/116 (73.28%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 1   MERGKKRRKLQEEEEEEEEGKMKLFFALIQNTKAIRDRMK-SKESTEEEKSKGVWNPKFQ 60
           ME G+KRRKLQEEEEEEE+ KM+LF+ALIQNTKA+RD MK SKE TEEEKSKGVWNPKFQ
Sbjct: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60

Query: 61  PEDFIEDNG-NYNNKSN-INLQLAAASSSKTKQSNEKREEQEDKDKVLHKFIEVRK 114
           PEDF E++G NYNNKSN I LQL+AASSS TKQ NEK++++EDK    +K +EV+K
Sbjct: 61  PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKH---YKVVEVKK 113

[Close]

BLAST of ClCG02G014690 vs. ExPASy TrEMBL
Match: A0A6J1DQG7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia OX=3673 GN=LOC111023284 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 68/111 (61.26%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 1   MERGKKRRKLQEE------EEEEEEGKMKLFFALIQNTKAIRDRMKSKEST-EEEKSKGV 60
           ME  +++RKLQ++      E+EEEE KMKLFFALIQNTK+IRDR+KSK+S  +++KSKGV
Sbjct: 1   MESVRRKRKLQDDEKEAQKEDEEEEEKMKLFFALIQNTKSIRDRVKSKQSAPQQDKSKGV 60

Query: 61  WNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDKV 105
           WNPKFQPEDFIED    + KSN   Q AA+SS  TKQ N++ EE++ KDKV
Sbjct: 61  WNPKFQPEDFIED---CDKKSNPTPQFAASSS--TKQRNKQEEEEQGKDKV 106

[Close]

BLAST of ClCG02G014690 vs. ExPASy TrEMBL
Match: A0A4S4D4I8 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_028387 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-08
Identity = 44/108 (40.74%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 6   KRRKLQEEEEEEEEGKMKLFFALIQNTKAIRDRMKS--KESTEEEKSKG----VWNPKFQ 65
           ++RK++ EEE+++E KM+ FFALI++T+  R+R+ S  ++  EEEK KG     WNP FQ
Sbjct: 39  RKRKMENEEEDDDEEKMQKFFALIRSTRDARERVMSGAEKLQEEEKKKGKPAEAWNPSFQ 98

Query: 66  PEDFIEDNGNYNN-----KSNINLQLAAASSSKTKQSNEKREEQEDKD 103
           PEDF+E  G+ +      ++++ L LA A  SK ++   K +EQE+++
Sbjct: 99  PEDFMEGGGDQSKGPPPPQASLALTLAIAGPSKREEDEAKEQEQEEEE 146

[Close]

BLAST of ClCG02G014690 vs. ExPASy TrEMBL
Match: V7BGK0 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G203700g PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-07
Identity = 40/70 (57.14%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 1  MERGKKRRKL----QEEEEEEEEGKMKLFFALIQNTKAIRDRMKSKESTEEEKSKGVWNP 60
          ME G+++RK+    + EEEE EE +M+ FFALI++TK  RDR+ SKE  EEEK+KGVW P
Sbjct: 6  MEGGRRKRKMEREEESEEEESEEEQMEKFFALIKSTKDARDRL-SKEK-EEEKAKGVWKP 65

Query: 61 KFQPEDFIED 67
           F+PEDF++D
Sbjct: 66 TFEPEDFMDD 73

[Close]

BLAST of ClCG02G014690 vs. ExPASy TrEMBL
Match: A0A6P5YP56 (protein NIM1-INTERACTING 3-like OS=Durio zibethinus OX=66656 GN=LOC111293581 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   MERGKKRR----KLQEEEEEEEEGKMKLFFALIQNTKAIRDRMK-----SKESTEEEKSK 60
           ME GKKR+    K +E ++EEEE K+K FFALI++T+ +RDR++     SKE  E++K K
Sbjct: 1   MECGKKRKMENEKEEESDDEEEEEKVKKFFALIRSTREMRDRLRNVPNGSKEEEEKKKKK 60

Query: 61  -------GVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQED 101
                   +WNPKFQPEDF+ED+ +  N  ++N    A  SSK +Q  E +E  ED
Sbjct: 61  QEEKSVAAMWNPKFQPEDFMEDSKS-KNPLSVN---DAGPSSKREQEKETKEGGED 112

The following BLAST results are available for this feature:

BLAST of ClCG02G014690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889660.1	8.7e-30	79.05	protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]	[more]
XP_038889662.1	8.7e-30	79.05	protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]	[more]
XP_038889661.1	8.7e-30	79.05	protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]	[more]
KGN61024.1	7.4e-29	73.28	hypothetical protein Csa_021295 [Cucumis sativus]	[more]
KAG6599168.1	4.3e-21	58.68	hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG02G014690 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G014690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ23	3.6e-29	73.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034770 PE=3 SV=1	[more]
A0A6J1DQG7	2.6e-19	61.26	LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 OS=Momordica charantia...	[more]
A0A4S4D4I8	3.5e-08	40.74	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0283...	[more]
V7BGK0	1.0e-07	57.14	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G203700g PE=3 ...	[more]
A0A6P5YP56	1.3e-07	44.83	protein NIM1-INTERACTING 3-like OS=Durio zibethinus OX=66656 GN=LOC111293581 PE=...	[more]

BLAST of ClCG02G014690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031425	NPR1/NH1-interacting protein	PFAM	PF15699	NPR1_interact	coord: 14..103 e-value: 1.2E-17 score: 64.5
IPR031425	NPR1/NH1-interacting protein	PANTHER	PTHR33669	PROTEIN NEGATIVE REGULATOR OF RESISTANCE	coord: 2..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..103
None	No IPR available	PANTHER	PTHR33669:SF4	PROTEIN NIM1-INTERACTING 3	coord: 2..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G014690.2	ClCG02G014690.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance
cellular_component	GO:0005634	nucleus