
ClCG02G014005 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACTCAGCCCCGAATTTTCTCCTCCACCACCCGCTCCGCCGTCTGTAAGTTCTCTCCCTCTCAAACCAATCGTATGACTCAAAAATTCACTCACTGTCTCATAGCCTGGGTCGTCGGAAAGAACATCCGTCCATTGCAACTCGCCGTTCAACTTCGCCGTCATCTCCATCTCACCGAAAATCCGCAGGTCTTCGACCTAGGTCTTGGTTTTTTCGTACTCAAATTCTCCGAGATCGATTTTCAAGCCCTAGAAGCCAATCCATGGTCAATCCCTAATCTCTGCATCCACGTCTTTCCATGGATTCCCAATTTCAAACCCTCGGAAGCCAAGATTTCTTCTATTGATGCTTGGATTCGGCTCCATCAGCTCTCCATAGAGTATTACGACGAAGAAATTTTGCGAGAAATTGCAGAGACCATCGGTGAAGGTCTCGTCAAAATCGTTCCGATTACAAAAGATCGGAAGAAATGTAAGTACGCTCGTATTTGCGTTAGAATAAATTTATGTGATCCACCTCCATCTTCGATCAAACTGGGTAAAATTCGACAGGAAATTGAGTATGAGGGTTTTGATCTGTTGTGCCGTCTCTGTGGATGTGTTTTTCGTCTGAAGCATGATTGTTCGAATTCAATGATGCCATTGATTTCTTCTGAATTATCTTCAGCCGGAACAGAATCTGTTGAACTGGCCGCATATTTATTGTTAAGAAATCCAAGATTAATGAAATATGTTTTTGAAGAATAA ATGGCAACTCAGCCCCGAATTTTCTCCTCCACCACCCGCTCCGCCGTCTGTAAGTTCTCTCCCTCTCAAACCAATCGTATGACTCAAAAATTCACTCACTGTCTCATAGCCTGGGTCGTCGGAAAGAACATCCGTCCATTGCAACTCGCCGTTCAACTTCGCCGTCATCTCCATCTCACCGAAAATCCGCAGGTCTTCGACCTAGGTCTTGGTTTTTTCGTACTCAAATTCTCCGAGATCGATTTTCAAGCCCTAGAAGCCAATCCATGGTCAATCCCTAATCTCTGCATCCACGTCTTTCCATGGATTCCCAATTTCAAACCCTCGGAAGCCAAGATTTCTTCTATTGATGCTTGGATTCGGCTCCATCAGCTCTCCATAGAGTATTACGACGAAGAAATTTTGCGAGAAATTGCAGAGACCATCGGTGAAGGTCTCGTCAAAATCGTTCCGATTACAAAAGATCGGAAGAAATGTAAGTACGCTCGTATTTGCGTTAGAATAAATTTATGTGATCCACCTCCATCTTCGATCAAACTGGGTAAAATTCGACAGGAAATTGAGTATGAGGGTTTTGATCTGTTGTGCCGTCTCTGTGGATGTGTTTTTCGTCTGAAGCATGATTGTTCGAATTCAATGATGCCATTGATTTCTTCTGAATTATCTTCAGCCGGAACAGAATCTGTTGAACTGGCCGCATATTTATTGTTAAGAAATCCAAGATTAATGAAATATGTTTTTGAAGAATAA ATGGCAACTCAGCCCCGAATTTTCTCCTCCACCACCCGCTCCGCCGTCTGTAAGTTCTCTCCCTCTCAAACCAATCGTATGACTCAAAAATTCACTCACTGTCTCATAGCCTGGGTCGTCGGAAAGAACATCCGTCCATTGCAACTCGCCGTTCAACTTCGCCGTCATCTCCATCTCACCGAAAATCCGCAGGTCTTCGACCTAGGTCTTGGTTTTTTCGTACTCAAATTCTCCGAGATCGATTTTCAAGCCCTAGAAGCCAATCCATGGTCAATCCCTAATCTCTGCATCCACGTCTTTCCATGGATTCCCAATTTCAAACCCTCGGAAGCCAAGATTTCTTCTATTGATGCTTGGATTCGGCTCCATCAGCTCTCCATAGAGTATTACGACGAAGAAATTTTGCGAGAAATTGCAGAGACCATCGGTGAAGGTCTCGTCAAAATCGTTCCGATTACAAAAGATCGGAAGAAATGTAAGTACGCTCGTATTTGCGTTAGAATAAATTTATGTGATCCACCTCCATCTTCGATCAAACTGGGTAAAATTCGACAGGAAATTGAGTATGAGGGTTTTGATCTGTTGTGCCGTCTCTGTGGATGTGTTTTTCGTCTGAAGCATGATTGTTCGAATTCAATGATGCCATTGATTTCTTCTGAATTATCTTCAGCCGGAACAGAATCTGTTGAACTGGCCGCATATTTATTGTTAAGAAATCCAAGATTAATGAAATATGTTTTTGAAGAATAA MATQPRIFSSTTRSAVCKFSPSQTNRMTQKFTHCLIAWVVGKNIRPLQLAVQLRRHLHLTENPQVFDLGLGFFVLKFSEIDFQALEANPWSIPNLCIHVFPWIPNFKPSEAKISSIDAWIRLHQLSIEYYDEEILREIAETIGEGLVKIVPITKDRKKCKYARICVRINLCDPPPSSIKLGKIRQEIEYEGFDLLCRLCGCVFRLKHDCSNSMMPLISSELSSAGTESVELAAYLLLRNPRLMKYVFEE Homology
BLAST of ClCG02G014005 vs. NCBI nr
Match: KGN50454.1 (hypothetical protein Csa_000484 [Cucumis sativus]) HSP 1 Score: 313.2 bits (801), Expect = 2.1e-81 Identity = 158/245 (64.49%), Postives = 179/245 (73.06%), Query Frame = 0
BLAST of ClCG02G014005 vs. NCBI nr
Match: KAA0034063.1 (hypothetical protein E6C27_scaffold65G00490 [Cucumis melo var. makuwa]) HSP 1 Score: 310.8 bits (795), Expect = 1.0e-80 Identity = 157/245 (64.08%), Postives = 177/245 (72.24%), Query Frame = 0
BLAST of ClCG02G014005 vs. NCBI nr
Match: KAG6600114.1 (hypothetical protein SDJN03_05347, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 300.8 bits (769), Expect = 1.1e-77 Identity = 145/216 (67.13%), Postives = 172/216 (79.63%), Query Frame = 0
BLAST of ClCG02G014005 vs. NCBI nr
Match: KAG7030785.1 (hypothetical protein SDJN02_04822, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 297.7 bits (761), Expect = 9.1e-77 Identity = 144/216 (66.67%), Postives = 171/216 (79.17%), Query Frame = 0
BLAST of ClCG02G014005 vs. NCBI nr
Match: KAG7031864.1 (hypothetical protein SDJN02_05905, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283.1 bits (723), Expect = 2.3e-72 Identity = 128/203 (63.05%), Postives = 161/203 (79.31%), Query Frame = 0
BLAST of ClCG02G014005 vs. ExPASy TrEMBL
Match: A0A0A0KNJ5 (DUF4283 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175780 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.0e-81 Identity = 158/245 (64.49%), Postives = 179/245 (73.06%), Query Frame = 0
BLAST of ClCG02G014005 vs. ExPASy TrEMBL
Match: A0A5A7SUD3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00490 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 5.0e-81 Identity = 157/245 (64.08%), Postives = 177/245 (72.24%), Query Frame = 0
BLAST of ClCG02G014005 vs. ExPASy TrEMBL
Match: A0A5A7SSJ3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00480 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 9.8e-69 Identity = 134/220 (60.91%), Postives = 164/220 (74.55%), Query Frame = 0
BLAST of ClCG02G014005 vs. ExPASy TrEMBL
Match: A0A0A0KLB0 (DUF4283 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G175790 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.9e-68 Identity = 129/212 (60.85%), Postives = 162/212 (76.42%), Query Frame = 0
BLAST of ClCG02G014005 vs. ExPASy TrEMBL
Match: A0A6J1FN13 (uncharacterized protein LOC111446932 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446932 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 2.0e-66 Identity = 132/219 (60.27%), Postives = 161/219 (73.52%), Query Frame = 0
BLAST of ClCG02G014005 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19 Identity = 59/198 (29.80%), Postives = 90/198 (45.45%), Query Frame = 0
BLAST of ClCG02G014005 vs. TAIR 10
Match: AT2G41590.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits to 217 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 8.9e-06 Identity = 35/141 (24.82%), Postives = 63/141 (44.68%), Query Frame = 0
BLAST of ClCG02G014005 vs. TAIR 10
Match: AT5G25200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05 Identity = 38/165 (23.03%), Postives = 71/165 (43.03%), Query Frame = 0
BLAST of ClCG02G014005 vs. TAIR 10
Match: AT5G18636.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.5e-05 Identity = 33/140 (23.57%), Postives = 62/140 (44.29%), Query Frame = 0
BLAST of ClCG02G014005 vs. TAIR 10
Match: AT2G02103.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 2.0e-05 Identity = 38/165 (23.03%), Postives = 70/165 (42.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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