Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGCGGATGTTCAGTTTGGTGGGCCTCAAGTCCAAAATGTGTATGGCCCAGCTGATCGAAGATATGGAGGAAGCCCGACAACTTAAGTGGGGCGGTGGGAGTCCAAATCTGGGAAGCAAAGGAAGCGGGTCAAACCTGACTCAAACGAAACCGGCAACCACCATCGCCTCCAGCCCGAGTCCAACGGCAGCCCGAACAATAACCCTCAACCCTACCTGTAATTCAGTTTCTCCTTCGAATACCGTGAGTTTCCGTGACACTAACGGTAGGAATTTTCCGACGGGGACTTTTCGCAGGTTGACGGATAGAGAGATGCAAAGCCGGAGGGAGAAAGGACTGTGCTACCGCTGTGACGAAAAATATGCCGTCGGCCATCGCTGTAAGAAGGAGTTAAACTTGTTCATTCAACAGGAAACCGACGGTGAGGACATTGAAGAAGAACTCGGGACCGACGCCGCTGTTGAGGGCGAGGTGATTCCGGCCACGTTGGAGACTTTGGACATTGAAACAGAAGCAACCAAAACGGGGGTATTATCCTTGAACTCTTTGGTCAGGCTGGATTCACCGAAAACGATGAAGTGACAAGGGACTGTGAGTAACAAGAAAGTGGTCGTGCTCATTGACAGTGGCGCTTCACACAATTTCATTGACGAATCGCTGGTAACATTGCTAAACTTACCATGTTCGCCACCTCAAGTTATGGGATTATGTAGGTAGTCAATCCGTTCGAACAACCGGCATTTGCAGAGGTGTAGTCCTCAACCTCCCAGGCTTAACAATTGTTAATGATTTTTTTCCATTATCATTGGGTAGTGCTGATATAATTTTGGGAGTACAGTGGCTGATGATGTTGGGAAAGGTTGAATGTGATTGGAGTACATCGGAGATGCAATTTGTAGGTGAATGGGATGTCAAACTTGAGGGGGATAGGAGTGTAATGAAGTCACAAATTTCTCTGAAATCTATGATGAAACAGGTGAAAGGATAA
mRNA sequence
ATGGAGATGCGGATGTTCAGTTTGGTGGGCCTCAAGTCCAAAATGTGTATGGCCCAGCTGATCGAAGATATGGAGGAAGCCCGACAACTTAAGTGGGGCGGTGGGAGTCCAAATCTGGGAAGCAAAGGAAGCGGGTCAAACCTGACTCAAACGAAACCGGCAACCACCATCGCCTCCAGCCCGAGTCCAACGGCAGCCCGAACAATAACCCTCAACCCTACCTGTAATTCAGTTTCTCCTTCGAATACCGTGAGTTTCCGTGACACTAACGGTAGGAATTTTCCGACGGGGACTTTTCGCAGGTTGACGGATAGAGAGATGCAAAGCCGGAGGGAGAAAGGACTGTGCTACCGCTGTGACGAAAAATATGCCGTCGGCCATCGCTGTAAGAAGGAGTTAAACTTGTTCATTCAACAGGAAACCGACGGTGAGGACATTGAAGAAGAACTCGGGACCGACGCCGCTGTTGAGGGCGAGGCTGGATTCACCGAAAACGATGAAGTGACAAGGGACTGTAGTCAATCCGTTCGAACAACCGGCATTTGCAGAGGTGTAGTCCTCAACCTCCCAGGCTTAACAATTGTTAATGATTTTTTTCCATTATCATTGGGTAGTGCTGATATAATTTTGGGAGTACAGTGGCTGATGATGTTGGGAAAGGTTGAATGTGATTGGAGTACATCGGAGATGCAATTTGTAGGTGAATGGGATGTCAAACTTGAGGGGGATAGGAGTGTAATGAAGTCACAAATTTCTCTGAAATCTATGATGAAACAGGTGAAAGGATAA
Coding sequence (CDS)
ATGGAGATGCGGATGTTCAGTTTGGTGGGCCTCAAGTCCAAAATGTGTATGGCCCAGCTGATCGAAGATATGGAGGAAGCCCGACAACTTAAGTGGGGCGGTGGGAGTCCAAATCTGGGAAGCAAAGGAAGCGGGTCAAACCTGACTCAAACGAAACCGGCAACCACCATCGCCTCCAGCCCGAGTCCAACGGCAGCCCGAACAATAACCCTCAACCCTACCTGTAATTCAGTTTCTCCTTCGAATACCGTGAGTTTCCGTGACACTAACGGTAGGAATTTTCCGACGGGGACTTTTCGCAGGTTGACGGATAGAGAGATGCAAAGCCGGAGGGAGAAAGGACTGTGCTACCGCTGTGACGAAAAATATGCCGTCGGCCATCGCTGTAAGAAGGAGTTAAACTTGTTCATTCAACAGGAAACCGACGGTGAGGACATTGAAGAAGAACTCGGGACCGACGCCGCTGTTGAGGGCGAGGCTGGATTCACCGAAAACGATGAAGTGACAAGGGACTGTAGTCAATCCGTTCGAACAACCGGCATTTGCAGAGGTGTAGTCCTCAACCTCCCAGGCTTAACAATTGTTAATGATTTTTTTCCATTATCATTGGGTAGTGCTGATATAATTTTGGGAGTACAGTGGCTGATGATGTTGGGAAAGGTTGAATGTGATTGGAGTACATCGGAGATGCAATTTGTAGGTGAATGGGATGTCAAACTTGAGGGGGATAGGAGTGTAATGAAGTCACAAATTTCTCTGAAATCTATGATGAAACAGGTGAAAGGATAA
Protein sequence
MEMRMFSLVGLKSKMCMAQLIEDMEEARQLKWGGGSPNLGSKGSGSNLTQTKPATTIASSPSPTAARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCDEKYAVGHRCKKELNLFIQQETDGEDIEEELGTDAAVEGEAGFTENDEVTRDCSQSVRTTGICRGVVLNLPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEMQFVGEWDVKLEGDRSVMKSQISLKSMMKQVKG
Homology
BLAST of ClCG02G013345 vs. NCBI nr
Match:
XP_038904464.1 (uncharacterized protein LOC120090832 [Benincasa hispida])
HSP 1 Score: 241.5 bits (615), Expect = 8.1e-60
Identity = 148/335 (44.18%), Postives = 200/335 (59.70%), Query Frame = 0
Query: 1 MEMRMFSLVGLKSKMCMAQLIEDMEEARQLKWGGGSPNLGSKGSGSNLTQTKPATTIASS 60
+EMRMF L+GLK KM MAQ+IEDMEEAR+ KWGGG+PN SK +G++ TT
Sbjct: 241 IEMRMFKLIGLKEKMRMAQIIEDMEEARRKKWGGGTPN-PSKSTGASSNSGLNTTTGQLG 300
Query: 61 PSP-----TAARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGL 120
P+P + ARTI+LNPT +PSN+V+ +D NGR+F G F+RL+D +MQ+RR+KGL
Sbjct: 301 PTPNQNTQSIARTISLNPTHAGGTPSNSVTLKDVNGRSFTIGAFKRLSDNKMQNRRDKGL 360
Query: 121 CYRCDEKYAVGHRCK-KELNL-----------------------------FIQQETDGED 180
CY+C+EKY GHRCK KEL++ + + TD E
Sbjct: 361 CYQCEEKYTPGHRCKRKELSILLYHNEEEGTEKAEESSKVEAPATTTLESMVMKTTDHEA 420
Query: 181 IEEELGTDAAVEG-------------------EAGFTEN--DE----------------- 240
E L + A ++ ++G + N D+
Sbjct: 421 AELSLNSLARIDSPRTIKVRGAIGDKDVVVLIDSGASHNFIDKELVSSLKLPQMPTTSYG 480
Query: 241 VTRDCSQSVRTTGICRGVVLNLPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWST 262
+ SVRTTG+C+GV+LNL LTI+ND FPL LG+ D++LGVQWLM LG+VECDW T
Sbjct: 481 IMLGIGTSVRTTGVCKGVILNLSNLTIINDLFPLPLGNIDVVLGVQWLMTLGRVECDWGT 540
BLAST of ClCG02G013345 vs. NCBI nr
Match:
XP_038907170.1 (uncharacterized protein LOC120092972 [Benincasa hispida])
HSP 1 Score: 223.0 bits (567), Expect = 3.0e-54
Identity = 150/356 (42.13%), Postives = 196/356 (55.06%), Query Frame = 0
Query: 3 MRMFSLVGLKSKMCMAQLIEDMEEARQLKWGGGSPNLGS--KGSGSNLTQTKPATTIASS 62
MRMF LVG+K K+ AQLIED EEA + KWG SPN + +GS +T +T+ +
Sbjct: 1 MRMFKLVGIKEKLGTAQLIEDTEEAHKRKWGSRSPNPSQSVQTTGSTITLGTGSTSGQGN 60
Query: 63 PS--PTAARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYR 122
+ PT ARTI+LNP+ +S++ SN+V+ RD NG+ G ++RL+D +MQSR +KGLCYR
Sbjct: 61 VNNIPT-ARTISLNPSRSSITSSNSVTLRDVNGKALSVGNYKRLSDSDMQSRGDKGLCYR 120
Query: 123 CDEKYAVGHRCKKELNLFIQQETDGEDIEEELGTDAA-VEG------------------- 182
CDE+Y+ GHRCKKELNL I + + E+ E G + VEG
Sbjct: 121 CDERYSPGHRCKKELNLLIHPDEEEEEAVVEKGVELENVEGITPAMLENMEHHPTILHPT 180
Query: 183 ------------------------------------------------------EAGFTE 242
++G T
Sbjct: 181 EAEIAELSIEDEIAELSTEDEIVELSLNSFAGIDSPKTVKLMGTVGDNNVVVLIDSGATH 240
Query: 243 N---DEV----------TRDC------SQSVRTTGICRGVVLNLPGLTIVNDFFPLSLGS 261
N D++ T C +SVRT GIC+GVVLNLP LTI+NDFFP+ LGS
Sbjct: 241 NFIDDQLVSTLNLPCSPTSSCGIMLGTGKSVRTNGICKGVVLNLPNLTIINDFFPIPLGS 300
BLAST of ClCG02G013345 vs. NCBI nr
Match:
XP_031737572.1 (uncharacterized protein LOC116402461 [Cucumis sativus])
HSP 1 Score: 127.5 bits (319), Expect = 1.7e-25
Identity = 88/234 (37.61%), Postives = 130/234 (55.56%), Query Frame = 0
Query: 87 RDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCDEKYAVGHRCK-KELNLFIQQ------ 146
+++ ++ + +R++TD EM+ ++EKG C+RCD+K++ HRCK +ELN+ + Q
Sbjct: 5 QESGAKSTMSQPYRQMTDNEMRIKKEKGWCFRCDKKFSPEHRCKRRELNIIVVQEGEDLS 64
Query: 147 -ETD--GEDIE----EELGTDAA-----------------VEGE-----------AGFTE 206
ETD GE+IE +E+ T+ A ++GE G T
Sbjct: 65 EETDQVGEEIETNGNDEINTEIANLSLNSLVGLNSSKTIKIKGEIRGREVVVLIDGGATH 124
Query: 207 N---DEVTRDCSQS----------------VRTTGICRGVVLNLPGLTIVNDFFPLSLGS 259
N +EV ++ S VR TG+C+ V L + L+I ++F PL LGS
Sbjct: 125 NFIAEEVVKELKISVETMDAYGVVLGTGGVVRATGVCKDVNLKIANLSITHNFLPLPLGS 184
BLAST of ClCG02G013345 vs. NCBI nr
Match:
KAA0056799.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99923.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 124.4 bits (311), Expect = 1.4e-24
Identity = 102/311 (32.80%), Postives = 146/311 (46.95%), Query Frame = 0
Query: 9 VGLKSKMCMAQLIEDMEEARQLKWGGGSPNLGSKGSGSNLTQTKPATTIASSP----SPT 68
VGLK M AQL E+ +++W G PN ++ TT+ SSP SPT
Sbjct: 28 VGLKDLMEAAQLAEE-----KVEWSKGGPN------PYPFSKEMAKTTLGSSPKSTGSPT 87
Query: 69 AARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCDEKYA 128
N S SNT F+ G ++RR T+ E+Q+R+EKGLCYRCDE ++
Sbjct: 88 TKMVTLAEKVVNQTSNSNTSQFQTVGGGGRREPSYRRWTNSELQARKEKGLCYRCDEPFS 147
Query: 129 VGHRCK-KELNLFI-----------QQETDGEDIE----EELGTDAAV------------ 188
G RCK +EL L + +++T G +E EL ++ V
Sbjct: 148 KGCRCKNRELGLCVVADDLGDTEMSEEDTGGSMVEIGPIVELSLNSVVGLTTPGTFKIRG 207
Query: 189 --------------------------EGEAGFTENDE--VTRDCSQSVRTTGICRGVVLN 248
E + TE + V ++V+ G+C GVV+
Sbjct: 208 KLEDRAVVVMIDCKATHSFISLRLVEEIQIATTETTQYRVIIGSGKAVQGKGMCTGVVVG 267
Query: 249 LPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEMQF-VGEWDVKLEGDRSVM 259
LPGLT+V DF PL LG+ D++LG+QWL G + DW M F VG+ V L+GD S+
Sbjct: 268 LPGLTVVEDFLPLELGNLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLT 327
BLAST of ClCG02G013345 vs. NCBI nr
Match:
TXG69438.1 (hypothetical protein EZV62_004373 [Acer yangbiense])
HSP 1 Score: 122.1 bits (305), Expect = 7.2e-24
Identity = 104/326 (31.90%), Postives = 142/326 (43.56%), Query Frame = 0
Query: 2 EMRMFSLVGLKSKMCMAQLIEDMEEAR-QLKWGGGSPNLGSKGSGSNLTQTKPATTIASS 61
E+R+ + L M +AQ IE A LK GG +KGSG +P ++ +
Sbjct: 221 ELRVLDPINLGRAMDLAQRIESKLMAMGTLKLNGGYS--ATKGSG----YARPVSSPTGA 280
Query: 62 PSPTAARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCD 121
P PT T+ P+ N P G RRLTD E+Q +R GLCYRCD
Sbjct: 281 PRPTHGGTL---PSAN------------------PYGNLRRLTDSELQLKRTHGLCYRCD 340
Query: 122 EKYAVGHRC-KKELNLFIQQETDGEDIEEEL-------------------GTDAAVEGEA 181
EK++ GH+C KKELN+ I + + E+ EE + ++
Sbjct: 341 EKWSPGHKCKKKELNVLITYDEEDEEEPEEAPVMVDEPVLEAAEISEFTEAVEVSLNSVV 400
Query: 182 GF--------------------------------------------TENDEVTRDCSQSV 241
G TE VT SV
Sbjct: 401 GLTTPKTMKMKGIVGQQQVVFLIDPGATHNFISADLVQKLKLPITRTEAYGVTMGTGDSV 460
Query: 242 RTTGICRGVVLNLPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEMQF-VGE 262
R GIC+GV L+L G+ IV +F PL LGS+D+ILG+QWL LG +W M+F +G
Sbjct: 461 RGEGICKGVTLHLQGINIVEEFLPLGLGSSDVILGIQWLATLGMTHTNWKLQVMKFQLGN 519
BLAST of ClCG02G013345 vs. ExPASy TrEMBL
Match:
A0A5D3BKW3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold701G00460 PE=4 SV=1)
HSP 1 Score: 124.4 bits (311), Expect = 7.0e-25
Identity = 102/311 (32.80%), Postives = 146/311 (46.95%), Query Frame = 0
Query: 9 VGLKSKMCMAQLIEDMEEARQLKWGGGSPNLGSKGSGSNLTQTKPATTIASSP----SPT 68
VGLK M AQL E+ +++W G PN ++ TT+ SSP SPT
Sbjct: 28 VGLKDLMEAAQLAEE-----KVEWSKGGPN------PYPFSKEMAKTTLGSSPKSTGSPT 87
Query: 69 AARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCDEKYA 128
N S SNT F+ G ++RR T+ E+Q+R+EKGLCYRCDE ++
Sbjct: 88 TKMVTLAEKVVNQTSNSNTSQFQTVGGGGRREPSYRRWTNSELQARKEKGLCYRCDEPFS 147
Query: 129 VGHRCK-KELNLFI-----------QQETDGEDIE----EELGTDAAV------------ 188
G RCK +EL L + +++T G +E EL ++ V
Sbjct: 148 KGCRCKNRELGLCVVADDLGDTEMSEEDTGGSMVEIGPIVELSLNSVVGLTTPGTFKIRG 207
Query: 189 --------------------------EGEAGFTENDE--VTRDCSQSVRTTGICRGVVLN 248
E + TE + V ++V+ G+C GVV+
Sbjct: 208 KLEDRAVVVMIDCKATHSFISLRLVEEIQIATTETTQYRVIIGSGKAVQGKGMCTGVVVG 267
Query: 249 LPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEMQF-VGEWDVKLEGDRSVM 259
LPGLT+V DF PL LG+ D++LG+QWL G + DW M F VG+ V L+GD S+
Sbjct: 268 LPGLTVVEDFLPLELGNLDMVLGMQWLQKQGSMTVDWRNLAMTFAVGDVKVVLKGDPSLT 327
BLAST of ClCG02G013345 vs. ExPASy TrEMBL
Match:
A0A5C7IJS7 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 3.5e-24
Identity = 104/326 (31.90%), Postives = 142/326 (43.56%), Query Frame = 0
Query: 2 EMRMFSLVGLKSKMCMAQLIEDMEEAR-QLKWGGGSPNLGSKGSGSNLTQTKPATTIASS 61
E+R+ + L M +AQ IE A LK GG +KGSG +P ++ +
Sbjct: 221 ELRVLDPINLGRAMDLAQRIESKLMAMGTLKLNGGYS--ATKGSG----YARPVSSPTGA 280
Query: 62 PSPTAARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCD 121
P PT T+ P+ N P G RRLTD E+Q +R GLCYRCD
Sbjct: 281 PRPTHGGTL---PSAN------------------PYGNLRRLTDSELQLKRTHGLCYRCD 340
Query: 122 EKYAVGHRC-KKELNLFIQQETDGEDIEEEL-------------------GTDAAVEGEA 181
EK++ GH+C KKELN+ I + + E+ EE + ++
Sbjct: 341 EKWSPGHKCKKKELNVLITYDEEDEEEPEEAPVMVDEPVLEAAEISEFTEAVEVSLNSVV 400
Query: 182 GF--------------------------------------------TENDEVTRDCSQSV 241
G TE VT SV
Sbjct: 401 GLTTPKTMKMKGIVGQQQVVFLIDPGATHNFISADLVQKLKLPITRTEAYGVTMGTGDSV 460
Query: 242 RTTGICRGVVLNLPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEMQF-VGE 262
R GIC+GV L+L G+ IV +F PL LGS+D+ILG+QWL LG +W M+F +G
Sbjct: 461 RGEGICKGVTLHLQGINIVEEFLPLGLGSSDVILGIQWLATLGMTHTNWKLQVMKFQLGN 519
BLAST of ClCG02G013345 vs. ExPASy TrEMBL
Match:
A0A5A7UDR7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00190 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 3.8e-23
Identity = 90/274 (32.85%), Postives = 140/274 (51.09%), Query Frame = 0
Query: 11 LKSKMCMAQLIEDMEEAR-QLKWGGGSPNLGSKGSGSNLTQTKPATTIASSPSPTAARTI 70
L M +AQ++E+ E AR + K G S G K +G N K +T + +
Sbjct: 136 LAEMMEVAQMVENREIARAEAKMCGYS---GGKIAGHNSVVGKTSTGGVAGDNKN----- 195
Query: 71 TLNPTCNSVSPSNTVSFRDT-NGRNFPTGTFRRLTDREMQSRREKGLCYRCDEKYAVGHR 130
N+V P T++ R + N G+++RL D E Q+R+EKGLC+RC+EKY+ H+
Sbjct: 196 ------NTVFPIRTITLRSSAPNENRREGSYKRLPDAEFQARKEKGLCFRCNEKYSADHK 255
Query: 131 CK----KELNLFIQQE-------TDGEDIEEELG-----------TDAAVEGEAGFTEND 190
C+ +EL +F+ E + E E+ELG + ++ G +
Sbjct: 256 CRLKEQRELRMFVVTEGREEYEIVEDEKEEKELGCIEINENLTTVVELSINSVVGLNDPG 315
Query: 191 EV-TRDCSQSVRTTGICRGVVLNLPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDW 250
+ R +V+ G+C + + L G IV DF PL LG D+ILG++WL LG DW
Sbjct: 316 TMKVRGSGAAVQGKGVCEKLEVQLKGWKIVEDFLPLELGGVDVILGMRWLYSLGVTTVDW 375
Query: 251 STSEMQFVGEW-DVKLEGDRSVMKSQISLKSMMK 259
+ FV E +V ++GD S+ K++ISLK+M+K
Sbjct: 376 KNLSLSFVAEGKEVNIKGDPSLTKARISLKNMIK 395
BLAST of ClCG02G013345 vs. ExPASy TrEMBL
Match:
J3SDF5 (Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21
Identity = 97/323 (30.03%), Postives = 157/323 (48.61%), Query Frame = 0
Query: 2 EMRMFSLVGLKSKMCMAQLIED---MEEARQLKWGGGSPNLGSKGSGSNLTQTKPATTIA 61
E+R+ + L M +A +E+ + AR+ GS ++ ++G SN + +
Sbjct: 305 EIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNPSLPSVYGSQG 364
Query: 62 SSPSPTAARTITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYR 121
S + T + I N + SV N + R F G RRLT++E+Q +R KGLC++
Sbjct: 365 GSNASTKSWAINSNASQTSV---NNAKPPPLSSRGF--GEMRRLTEKELQEKRAKGLCFK 424
Query: 122 CDEKYAVGHRC-KKELNLFIQQETDGEDIE-------------EELGTDAAVEGEAGF-- 181
CDEK+ VGH+C +KEL++ ++ + +++E EE+ + ++ G
Sbjct: 425 CDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLSN 484
Query: 182 ----------------------------------------TENDE--VTRDCSQSVRTTG 241
TE++E V+ Q+VR TG
Sbjct: 485 PKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGVSLGDGQAVRGTG 544
Query: 242 ICRGVVLNLP-GLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEMQF-VGEWDV 262
ICR V L L GL +V DF PL LG++D+ILGVQWL LG V +W T +M F +G
Sbjct: 545 ICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLGTVVSNWKTQKMSFQLGGVPY 604
BLAST of ClCG02G013345 vs. ExPASy TrEMBL
Match:
A0A5D3CRH2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001280 PE=4 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 2.1e-21
Identity = 87/269 (32.34%), Postives = 136/269 (50.56%), Query Frame = 0
Query: 10 GLKSKMCMAQLIEDMEEARQLKWGGGSPNLGSKGSGSNLTQTKPATTIASSPSPT-AART 69
GL M +AQL E+ E+ R G + G K + +KP +++ + T RT
Sbjct: 35 GLAEMMLLAQLTENREKIRNEASLKG--HNGGKYPFYPSSISKPNNSVSDKGNTTFPMRT 94
Query: 70 ITLNPTCNSVSPSNTVSFRDTNGRNFPTGTFRRLTDREMQSRREKGLCYRCDEKYAVGHR 129
ITL SN + G GT +RL++ E Q+R+EKGLC+RC+EKY+ H+
Sbjct: 95 ITLK--------SNPI------GETKKEGTSKRLSEAEFQARKEKGLCFRCNEKYSHDHK 154
Query: 130 CK----KELNLFIQQETDGE-DIEEELGTDAAVEGEAGFTENDEVTRDCS---------- 189
CK +EL +++ + D + +I EE + E D+V + S
Sbjct: 155 CKNKEQRELRMYVMKSEDEKFEIIEEANYEEKELKMTSIAEEDQVVIELSINSVVGLSNP 214
Query: 190 ---QSVRTTGICRGVVLNLPGLTIVNDFFPLSLGSADIILGVQWLMMLGKVECDWSTSEM 249
+++ GIC V + L G ++ D PL LG D++LG+QWL LG E DW M
Sbjct: 215 GSGAAIKGKGICESVEIILNGWKVIVDLLPLELGGVDVVLGMQWLYSLGNTEVDWRNLTM 274
Query: 250 QFVGEW-DVKLEGDRSVMKSQISLKSMMK 259
F+ + + ++GD S+ K+++SLK+MMK
Sbjct: 275 IFLHQGKKILIKGDPSLTKARVSLKNMMK 287
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038904464.1 | 8.1e-60 | 44.18 | uncharacterized protein LOC120090832 [Benincasa hispida] | [more] |
| XP_038907170.1 | 3.0e-54 | 42.13 | uncharacterized protein LOC120092972 [Benincasa hispida] | [more] |
| XP_031737572.1 | 1.7e-25 | 37.61 | uncharacterized protein LOC116402461 [Cucumis sativus] | [more] |
| KAA0056799.1 | 1.4e-24 | 32.80 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ99923.1 ty3-gyp... | [more] |
| TXG69438.1 | 7.2e-24 | 31.90 | hypothetical protein EZV62_004373 [Acer yangbiense] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BKW3 | 7.0e-25 | 32.80 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5C7IJS7 | 3.5e-24 | 31.90 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1 | [more] |
| A0A5A7UDR7 | 3.8e-23 | 32.85 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| J3SDF5 | 1.2e-21 | 30.03 | Ty3/gypsy retrotransposon protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 ... | [more] |
| A0A5D3CRH2 | 2.1e-21 | 32.34 | Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
