
ClCG02G013120 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAATTTCTTAAAGAAGAGCTCCCTGTCATGCCTTCCTCTAGTCACCGACCAAACGACCTTGTTTGTAAAGCGTGGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCAGGGAACAAAAGCTTGTAAGCAAAGCTATTCTTTTTGTGATTATTTGTCTTCTCGCTCTTTCCATTTTGACTCTAAAATGTGGATTTTCTTTATTTTTTATGTTAATTAGGAAATCCCAAGAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCAAAGAGTGGAATCTGGGTTTGACAAAAAGTAATAATGGAAGAAGAGTGTGGCTTCATAATGGTTGGCAAAACTTTGTTGAGTTTTATTCTGTTAAATTGGGCTACTTTCTTGTGTTCAAATATCAAATCCAATGTTCAAGTTTTTATGTCCTCATCTTTGATCTTACCGCTACGGAAATCGAGTATCCAATGAACAAAATTCGTCTTGATGATGCTGAAAAGAAGGTCAAAATGGAGACAAGTTTGATTGATCTTGACCAAGTTTCTTACTCTCAAGGTATGTTTCTTGTTTGAGGTTTGATGTTGAAGCATTAAATAATGTCTATTCTATTACTACCATTTTTAACAAACAAATTTAAGTTTCATTTTAATATTTGAGCTATTAGATTAGATTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATAAATGCAAATAGTAATCAATTTCAAAGTCTTTGCAGATATTGGACAAGGTAAAAAAAATTGCAAATACAGTATATTTTAAATTTTGCTATCTTTGCAATTTTTTTAAAAATTATTTTCCCTAAAAATGATACTCAATACAATTATCCTATTTTTTTTTTGTTCTTAAACTTTCGAATTTTTAGTAATTTAATCAATATACTACTTCAAAGAAATAACCATTTTAAGTTCTTTTAGTCTTCAACATGTTTAAATTATAACCCCTTAAATTCTTAAACTTAGGGATGTAAGCAAAATTGTGAATGGACATACTCAAATAACTTATAAACCAGCTTCTTAAAATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATCACTTTATTTTCAAATGTACCAATTAACAACGCTCAATTTTTTTTTTTTCTAAAAAAAAAACCCTAGATTTCAAAGTTGGCAAAGTTAAGTTTGGCGCCATAGAACTGATGAACAATGAGAGGAATCTGTCATCGATGACGAGCCGACGAGCAAGGGCGATGGCAAAAGCTACCGCTTTCCAATCTATGACTCTGAATCCTTCTTTCATGTGCAAGATGTCGCCTTCACACATTCATCCAGGAAAATGTCTTGTAAGCAAATCAACTACCTTATATTTTTCCATGAAGCATATTTTTCACTTGTTTTGTTTTTGGTCAAAAGTAGCATGTACCAAGAAGTTTTGTAGAGATGCATCTTGAAGAGGCCACAGACATCATTCTTCAAGTGTCAGATGGAAGATTTTGGGGAGCTCGTTGTGGTTTTTATTTGGGGAAAAGAATGAGAAAGAGGGCCGAATTGATAGGTGGTTGGAGGAAATTCCGTTTGGACAATAACTTGAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTTCAAAAAGCAGTAGAAGAATCTGTTTCAAAGTTGAAATTTTTCGAGCTTCTTGA ATGTTGAAATTTCTTAAAGAAGAGCTCCCTGTCATGCCTTCCTCTAGTCACCGACCAAACGACCTTGTTTGTAAAGCGTGGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCAGGGAACAAAAGCTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCAAAGAGTGGAATCTGGGTTTGACAAAAAGTAATAATGGAAGAAGAGTGTGGCTTCATAATGGTTGGCAAAACTTTGTTGAGTTTTATTCTGTTAAATTGGGCTACTTTCTTGTGTTCAAATATCAAATCCAATGTTCAAGTTTTTATGTCCTCATCTTTGATCTTACCGCTACGGAAATCGAGTATCCAATGAACAAAATTCGTCTTGATGATGCTGAAAAGAAGGTCAAAATGGAGACAAGTTTGATTGATCTTGACCAAGTTTCTTACTCTCAAGGTATGAATCTGTCATCGATGACGAGCCGACGAGCAAGGGCGATGGCAAAAGCTACCGCTTTCCAATCTATGACTCTGAATCCTTCTTTCATGTGCAAGATGTCGCCTTCACACATTCATCCAGGAAAATGTCTTCATGTACCAAGAAGTTTTGTAGAGATGCATCTTGAAGAGGCCACAGACATCATTCTTCAAGTGTCAGATGGAAGATTTTGGGGAGCTCGTTGTGGTTTTTATTTGGGGAAAAGAATGAGAAAGAGGGCCGAATTGATAGGTGGTTGGAGGAAATTCCGTTTGGACAATAACTTGAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTTCAAAAAGCAGTAGAAGAATCTGTTTCAAAGTTGAAATTTTTCGAGCTTCTTGA ATGTTGAAATTTCTTAAAGAAGAGCTCCCTGTCATGCCTTCCTCTAGTCACCGACCAAACGACCTTGTTTGTAAAGCGTGGGACAATCCCCATTTCTTTAAGGTTGTTCTTGCTGATGCTCTCAGGGAACAAAAGCTTGAAATCCCAAGAAAGTTTGTGAGAGAATATGGGGTAAAAGCTTTGTTAAATGACCAAATATGTCTCAAGGTGGCTGATGGCAAAGAGTGGAATCTGGGTTTGACAAAAAGTAATAATGGAAGAAGAGTGTGGCTTCATAATGGTTGGCAAAACTTTGTTGAGTTTTATTCTGTTAAATTGGGCTACTTTCTTGTGTTCAAATATCAAATCCAATGTTCAAGTTTTTATGTCCTCATCTTTGATCTTACCGCTACGGAAATCGAGTATCCAATGAACAAAATTCGTCTTGATGATGCTGAAAAGAAGGTCAAAATGGAGACAAGTTTGATTGATCTTGACCAAGTTTCTTACTCTCAAGGTATGAATCTGTCATCGATGACGAGCCGACGAGCAAGGGCGATGGCAAAAGCTACCGCTTTCCAATCTATGACTCTGAATCCTTCTTTCATGTGCAAGATGTCGCCTTCACACATTCATCCAGGAAAATGTCTTCATGTACCAAGAAGTTTTGTAGAGATGCATCTTGAAGAGGCCACAGACATCATTCTTCAAGTGTCAGATGGAAGATTTTGGGGAGCTCGTTGTGGTTTTTATTTGGGGAAAAGAATGAGAAAGAGGGCCGAATTGATAGGTGGTTGGAGGAAATTCCGTTTGGACAATAACTTGAAAGTTGGCGATTTCTGTGTTTTTGAGATGATTTCAAAAAGCAGTAGAAGAATCTGTTTCAAAGTTGAAATTTTTCGAGCTTCTTGA MLKFLKEELPVMPSSSHRPNDLVCKAWDNPHFFKVVLADALREQKLEIPRKFVREYGVKALLNDQICLKVADGKEWNLGLTKSNNGRRVWLHNGWQNFVEFYSVKLGYFLVFKYQIQCSSFYVLIFDLTATEIEYPMNKIRLDDAEKKVKMETSLIDLDQVSYSQGMNLSSMTSRRARAMAKATAFQSMTLNPSFMCKMSPSHIHPGKCLHVPRSFVEMHLEEATDIILQVSDGRFWGARCGFYLGKRMRKRAELIGGWRKFRLDNNLKVGDFCVFEMISKSSRRICFKVEIFRAS Homology
BLAST of ClCG02G013120 vs. NCBI nr
Match: XP_038900379.1 (B3 domain-containing transcription factor VRN1-like [Benincasa hispida]) HSP 1 Score: 383.3 bits (983), Expect = 2.0e-102 Identity = 196/299 (65.55%), Postives = 231/299 (77.26%), Query Frame = 0
BLAST of ClCG02G013120 vs. NCBI nr
Match: XP_016902162.1 (PREDICTED: B3 domain-containing protein At3g18960-like [Cucumis melo]) HSP 1 Score: 367.9 bits (943), Expect = 8.5e-98 Identity = 196/291 (67.35%), Postives = 230/291 (79.04%), Query Frame = 0
BLAST of ClCG02G013120 vs. NCBI nr
Match: XP_031736563.1 (B3 domain-containing transcription factor VRN1-like [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 1.7e-90 Identity = 188/313 (60.06%), Postives = 223/313 (71.25%), Query Frame = 0
BLAST of ClCG02G013120 vs. NCBI nr
Match: XP_008457959.1 (PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2 [Cucumis melo]) HSP 1 Score: 335.9 bits (860), Expect = 3.6e-88 Identity = 179/303 (59.08%), Postives = 214/303 (70.63%), Query Frame = 0
BLAST of ClCG02G013120 vs. NCBI nr
Match: XP_022971708.1 (B3 domain-containing protein REM8-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 322.4 bits (825), Expect = 4.1e-84 Identity = 175/314 (55.73%), Postives = 216/314 (68.79%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23 Identity = 93/349 (26.65%), Postives = 146/349 (41.83%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.6e-14 Identity = 39/118 (33.05%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.3e-13 Identity = 40/118 (33.90%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy Swiss-Prot
Match: Q851V1 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13 Identity = 77/271 (28.41%), Postives = 125/271 (46.13%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy Swiss-Prot
Match: Q10Q26 (B3 domain-containing protein Os03g0212300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0212300 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 6.7e-13 Identity = 67/258 (25.97%), Postives = 115/258 (44.57%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy TrEMBL
Match: A0A1S4E1R1 (B3 domain-containing protein At3g18960-like OS=Cucumis melo OX=3656 GN=LOC103497525 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 4.1e-98 Identity = 196/291 (67.35%), Postives = 230/291 (79.04%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy TrEMBL
Match: A0A1S3C7C6 (putative B3 domain-containing protein Os03g0621600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497524 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.7e-88 Identity = 179/303 (59.08%), Postives = 214/303 (70.63%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy TrEMBL
Match: A0A6J1I7N8 (B3 domain-containing protein REM8-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470376 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 2.0e-84 Identity = 175/314 (55.73%), Postives = 216/314 (68.79%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy TrEMBL
Match: A0A1S4E1Q2 (uncharacterized protein LOC103497524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497524 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 9.8e-84 Identity = 179/340 (52.65%), Postives = 212/340 (62.35%), Query Frame = 0
BLAST of ClCG02G013120 vs. ExPASy TrEMBL
Match: A0A6J1EQN2 (B3 domain-containing protein REM8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434972 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.9e-82 Identity = 175/314 (55.73%), Postives = 214/314 (68.15%), Query Frame = 0
BLAST of ClCG02G013120 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 110.5 bits (275), Expect = 2.3e-24 Identity = 93/349 (26.65%), Postives = 146/349 (41.83%), Query Frame = 0
BLAST of ClCG02G013120 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-15 Identity = 39/118 (33.05%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of ClCG02G013120 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-14 Identity = 40/118 (33.90%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of ClCG02G013120 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 69.3 bits (168), Expect = 5.8e-12 Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = 0
BLAST of ClCG02G013120 vs. TAIR 10
Match: AT4G31690.1 (Transcriptional factor B3 family protein ) HSP 1 Score: 64.3 bits (155), Expect = 1.9e-10 Identity = 66/269 (24.54%), Postives = 112/269 (41.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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