ClCG02G012490 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G012490
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Mads box protein
Location	CG_Chr02: 25985804 .. 25986430 (-)
RNA-Seq Expression	ClCG02G012490
Synteny	ClCG02G012490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAATCGTTAGGCCGTCAAAAAATCGAAATCAAGAAACTCGAGGTGAAGAGTAGACAGCAAGTAACCTTTTCCAAACGCCGTGCCGGACTTTTCAACAAGGCAGCGGAGCTCTCCATTCTCTGTGGTGCTGAGATAGGCATCCTCGTCTTCTCTTCTAGCGGCAAAATTTACACGTTCGGCCATCCGAATGTTGATTCGCTTCTAGATCGTTTCCTAACAGCGAATTTTGCTCCGCCGAAGCCCCCCGAAGCGTACCTCCCTCTGGCGGAGTTGAATCGCGATTTTGAGAATGCAACGGTGGAGTTCGAATTCGAGAAGAGGCGCGCGGCGGAGGTAGAAGAGAGAATGAGGAATAGCCGGCGATTTTGGTGGGATGAGCCGATGGAATGTATGGGAATCGAGGATTTGAAGCGATTCCGGTCGTCGTTGCTGGAACTCAGGGGAAAAGTTGCAGAGAGAGTGGAGAAATTGGCGGCAGTGAGAAATCGAGGGCTTCTGATGCCTGCGGCGTCGTTTCATCTCGCCGGAAACCTCCAATATGCGCCGCTGCCGTCGTTTCATCTCGCTGGGAGTAACTCCGTCGCGACGGAGATCGAGGGTTTGGGGTTAGGGTTTCTTTGA

mRNA sequence

ATGAAGAAATCGTTAGGCCGTCAAAAAATCGAAATCAAGAAACTCGAGGTGAAGAGTAGACAGCAAGTAACCTTTTCCAAACGCCGTGCCGGACTTTTCAACAAGGCAGCGGAGCTCTCCATTCTCTGTGGTGCTGAGATAGGCATCCTCGTCTTCTCTTCTAGCGGCAAAATTTACACGTTCGGCCATCCGAATGTTGATTCGCTTCTAGATCGTTTCCTAACAGCGAATTTTGCTCCGCCGAAGCCCCCCGAAGCGTACCTCCCTCTGGCGGAGTTGAATCGCGATTTTGAGAATGCAACGGTGGAGTTCGAATTCGAGAAGAGGCGCGCGGCGGAGGTAGAAGAGAGAATGAGGAATAGCCGGCGATTTTGGTGGGATGAGCCGATGGAATGTATGGGAATCGAGGATTTGAAGCGATTCCGGTCGTCGTTGCTGGAACTCAGGGGAAAAGTTGCAGAGAGAGTGGAGAAATTGGCGGCAGTGAGAAATCGAGGGCTTCTGATGCCTGCGGCGTCGTTTCATCTCGCCGGAAACCTCCAATATGCGCCGCTGCCGTCGTTTCATCTCGCTGGGAGTAACTCCGTCGCGACGGAGATCGAGGGTTTGGGGTTAGGGTTTCTTTGA

Coding sequence (CDS)

ATGAAGAAATCGTTAGGCCGTCAAAAAATCGAAATCAAGAAACTCGAGGTGAAGAGTAGACAGCAAGTAACCTTTTCCAAACGCCGTGCCGGACTTTTCAACAAGGCAGCGGAGCTCTCCATTCTCTGTGGTGCTGAGATAGGCATCCTCGTCTTCTCTTCTAGCGGCAAAATTTACACGTTCGGCCATCCGAATGTTGATTCGCTTCTAGATCGTTTCCTAACAGCGAATTTTGCTCCGCCGAAGCCCCCCGAAGCGTACCTCCCTCTGGCGGAGTTGAATCGCGATTTTGAGAATGCAACGGTGGAGTTCGAATTCGAGAAGAGGCGCGCGGCGGAGGTAGAAGAGAGAATGAGGAATAGCCGGCGATTTTGGTGGGATGAGCCGATGGAATGTATGGGAATCGAGGATTTGAAGCGATTCCGGTCGTCGTTGCTGGAACTCAGGGGAAAAGTTGCAGAGAGAGTGGAGAAATTGGCGGCAGTGAGAAATCGAGGGCTTCTGATGCCTGCGGCGTCGTTTCATCTCGCCGGAAACCTCCAATATGCGCCGCTGCCGTCGTTTCATCTCGCTGGGAGTAACTCCGTCGCGACGGAGATCGAGGGTTTGGGGTTAGGGTTTCTTTGA

Protein sequence

MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTFGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRNSRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGNLQYAPLPSFHLAGSNSVATEIEGLGLGFL

Homology

[Close]

BLAST of ClCG02G012490 vs. NCBI nr
Match: XP_038902722.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 183/208 (87.98%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEI ILVFS +GKIYT
Sbjct: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIAILVFSPTGKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD LLDR LTANFAPPKP E+YLPLAELNRDF++A  EFE EKRRAAEV ERMR+
Sbjct: 61  FGHPNVDLLLDRSLTANFAPPKPAESYLPLAELNRDFDDAMAEFEIEKRRAAEV-ERMRS 120

Query: 121 SRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGNL 180
           S  FWWDEP+ECMGIEDLKRFRSSL+ELRGKVAERVEKLAAVRN GLLMPAASFHL GNL
Sbjct: 121 SGGFWWDEPVECMGIEDLKRFRSSLVELRGKVAERVEKLAAVRNGGLLMPAASFHLTGNL 180

Query: 181 QYAPLPSFHLAGSNSVATEIEGLGLGFL 209
           Q APLP FHLAG++SVATEIE LGLGFL
Sbjct: 181 QCAPLPPFHLAGNHSVATEIEDLGLGFL 207

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BLAST of ClCG02G012490 vs. NCBI nr
Match: XP_004149713.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical protein Csa_006560 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 4.9e-68
Identity = 149/203 (73.40%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKSLGRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+ KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF PPKP EAYLPL ELNRD ++ T EFE EKRRA    ERMR 
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRA----ERMRK 120

Query: 121 SRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGNL 180
           +  FWWDE MECMGIEDLKRFRSSL+ELRGKVAERVE+LAAVRN+G L  + SFH     
Sbjct: 121 TGGFWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFH----- 180

Query: 181 QYAPLPSFHLAGSNSVATEIEGL 204
                   HL    SVATEI+ L
Sbjct: 181 --------HL----SVATEIDDL 182

[Close]

BLAST of ClCG02G012490 vs. NCBI nr
Match: XP_008457781.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 3.3e-64
Identity = 146/209 (69.86%), Postives = 161/209 (77.03%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKS GRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF P KP EAYLPL ELNRD ++AT EFE EK RA    ERMRN
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA----ERMRN 120

Query: 121 SRRFWWDE-PMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGN 180
           +  FWWDE  MECMGIE+LKRFRSSL+ELRGKVAE+VE+LAAV N+ +L+ + SFH    
Sbjct: 121 TGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---- 180

Query: 181 LQYAPLPSFHLAGSNSVATEIEGLGLGFL 209
                            AT IE LGLGFL
Sbjct: 181 ---------------HHATTIEDLGLGFL 185

[Close]

BLAST of ClCG02G012490 vs. NCBI nr
Match: TYJ99494.1 (aspartic proteinase CDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.1 bits (640), Expect = 8.1e-63
Identity = 136/176 (77.27%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKS GRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF P KP EAYLPL ELNRD ++AT EFE EK RA    ERMRN
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA----ERMRN 120

Query: 121 SRRFWWDE-PMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFH 176
           +  FWWDE  MECMGIE+LKRFRSSL+ELRGKVAE+VE+LAAV N+ +L+ + SFH
Sbjct: 121 TGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH 171

[Close]

BLAST of ClCG02G012490 vs. NCBI nr
Match: XP_022986583.1 (agamous-like MADS-box protein AGL61 [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 5.3e-62
Identity = 138/197 (70.05%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKSLGR+KIEIKKLE KS QQVTFSKRRAGLFNKAAELS+LCGAEI ILV S+S K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSASNKLYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNV+SLLDRFL  N APPKP EAYLPL ELNRDF++   EF+ EKRRAA   ER+ N
Sbjct: 61  FGHPNVESLLDRFLAGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAA---ERLSN 120

Query: 121 SRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPA------ASF 180
             RFWWDEP+E M I++LKRFRSSL+ELRGKVAERVEK  A+R  G  +PA       S 
Sbjct: 121 D-RFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTAMRKEGSPIPALQPSTPPSI 180

Query: 181 HLAGNLQYAP-LPSFHL 191
            L GNLQ  P  PS  L
Sbjct: 181 TLVGNLQRPPTTPSIDL 193

[Close]

BLAST of ClCG02G012490 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 64/159 (40.25%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           +KKS GRQKIE+ K++ +S  QVTFSKRR+GLF KA+EL  LCGAE+ I+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDSLLDRFLTANFAPP--------KPPEAYLPLAELNRDFENATVEFEFEKRRAA 120
           FGHPNVDS++DRF+  N  PP        +       + +LN        + E EK++  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 EVEERMRNSRRF--WWDEPMECMGIEDLKRFRSSLLELR 150
           E+++    ++    WW++P+E + +  L+ F+ +L  L+
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of ClCG02G012490 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-25
Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTF 61
           K+S+GRQKI + K++ +S +QVTFSKRRAGLF KA+EL  LCGAEIGI+VFS + K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDSLLDRFLTANFAPPKPPEAY--LPLA--ELNRDFENATVEFEFEKRRAAEVEER 121
           GHP+V+S+LDR+++ N       +     P A  ELN    +   E E EK++   +EE 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 MRNSRR----FWWDEPMECMGIEDLKRFRSSLLELRGKV 153
            + S R     WW++P+E M +  L+  + +L ELR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of ClCG02G012490 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 69/176 (39.20%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTF 61
           +K+LGR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  LC AEI I+VFS SGK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDSLLDRFL-------TANFAPPKPPEAYLPLAELNRDFENATVEFEFE---KRRA 121
           GHPNV+ LLD  L         NFA  +     L +  LN        E E E   K+  
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESR---TKLRIQMLNESLTEVMAEKEKEQETKQSI 122

Query: 122 AEVEERMRNSRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGL 168
            + E   +++ ++W + P E     +L +  S   +L     E  EK+A + +R L
Sbjct: 123 VQNERENKDAEKWWRNSPTEL----NLAQSTSMKCDLEALKKEVDEKVAQLHHRNL 171

[Close]

BLAST of ClCG02G012490 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.8e-20
Identity = 59/138 (42.75%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           +KK+LGR+K+EI K+  +S  QVTFSKR+AGLF KA+E   LC A+I ++VFS +GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDSLLDRF--LTANFAPPKPPEAY--LPLAELNRDFENATVEFEFE---KRRAAE 120
           FGHPNVD LLD F             E+Y  L +  LN+ +     E E E   K+  A+
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 VEERMRNSRRFWWDEPME 132
            E    N+  +W   P+E
Sbjct: 122 NERENENAEEWWSKSPLE 139

[Close]

BLAST of ClCG02G012490 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-19
Identity = 55/162 (33.95%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 5   LGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTFGHP 64
           +GR+KI+++ ++  + +QVTFSKRR GLF KA+EL+ LC AE+GI+VFS  GK +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVDSLLDRFL----TANFAPPKPPEAYLP-LAELNRDFENATVEFEFEKRRAAEVEERMR 124
           N+DS+ +RF+     ++    +    Y P L  L+   +    E E EK R  + +E++ 
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 NSRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAA 162
           ++    + E +E + +++L  ++  L  + G++  +V  L A
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of ClCG02G012490 vs. ExPASy TrEMBL
Match: A0A0A0LLS2 (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.4e-68
Identity = 149/203 (73.40%), Postives = 161/203 (79.31%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKSLGRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+ KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF PPKP EAYLPL ELNRD ++ T EFE EKRRA    ERMR 
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRA----ERMRK 120

Query: 121 SRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGNL 180
           +  FWWDE MECMGIEDLKRFRSSL+ELRGKVAERVE+LAAVRN+G L  + SFH     
Sbjct: 121 TGGFWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFH----- 180

Query: 181 QYAPLPSFHLAGSNSVATEIEGL 204
                   HL    SVATEI+ L
Sbjct: 181 --------HL----SVATEIDDL 182

[Close]

BLAST of ClCG02G012490 vs. ExPASy TrEMBL
Match: A0A5A7TV93 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003090 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 146/209 (69.86%), Postives = 161/209 (77.03%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKS GRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF P KP EAYLPL ELNRD ++AT EFE EK RA    ERMRN
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA----ERMRN 120

Query: 121 SRRFWWDE-PMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGN 180
           +  FWWDE  MECMGIE+LKRFRSSL+ELRGKVAE+VE+LAAV N+ +L+ + SFH    
Sbjct: 121 TGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---- 180

Query: 181 LQYAPLPSFHLAGSNSVATEIEGLGLGFL 209
                            AT IE LGLGFL
Sbjct: 181 ---------------HHATTIEDLGLGFL 185

[Close]

BLAST of ClCG02G012490 vs. ExPASy TrEMBL
Match: A0A1S3C5V9 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 146/209 (69.86%), Postives = 161/209 (77.03%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKS GRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF P KP EAYLPL ELNRD ++AT EFE EK RA    ERMRN
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA----ERMRN 120

Query: 121 SRRFWWDE-PMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFHLAGN 180
           +  FWWDE  MECMGIE+LKRFRSSL+ELRGKVAE+VE+LAAV N+ +L+ + SFH    
Sbjct: 121 TGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH---- 180

Query: 181 LQYAPLPSFHLAGSNSVATEIEGLGLGFL 209
                            AT IE LGLGFL
Sbjct: 181 ---------------HHATTIEDLGLGFL 185

[Close]

BLAST of ClCG02G012490 vs. ExPASy TrEMBL
Match: A0A5D3BKF4 (Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00600 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.9e-63
Identity = 136/176 (77.27%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKS GRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEI ILVFSS+GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNVD L+DRFLT+NF P KP EAYLPL ELNRD ++AT EFE EK RA    ERMRN
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA----ERMRN 120

Query: 121 SRRFWWDE-PMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPAASFH 176
           +  FWWDE  MECMGIE+LKRFRSSL+ELRGKVAE+VE+LAAV N+ +L+ + SFH
Sbjct: 121 TGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFH 171

[Close]

BLAST of ClCG02G012490 vs. ExPASy TrEMBL
Match: A0A6J1JGY4 (agamous-like MADS-box protein AGL61 OS=Cucurbita maxima OX=3661 GN=LOC111484282 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.6e-62
Identity = 138/197 (70.05%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           MKKSLGR+KIEIKKLE KS QQVTFSKRRAGLFNKAAELS+LCGAEI ILV S+S K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSASNKLYT 60

Query: 61  FGHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRN 120
           FGHPNV+SLLDRFL  N APPKP EAYLPL ELNRDF++   EF+ EKRRAA   ER+ N
Sbjct: 61  FGHPNVESLLDRFLAGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAA---ERLSN 120

Query: 121 SRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGLLMPA------ASF 180
             RFWWDEP+E M I++LKRFRSSL+ELRGKVAERVEK  A+R  G  +PA       S 
Sbjct: 121 D-RFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTAMRKEGSPIPALQPSTPPSI 180

Query: 181 HLAGNLQYAP-LPSFHL 191
            L GNLQ  P  PS  L
Sbjct: 181 TLVGNLQRPPTTPSIDL 193

[Close]

BLAST of ClCG02G012490 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 118.2 bits (295), Expect = 7.7e-27
Identity = 64/159 (40.25%), Postives = 99/159 (62.26%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           +KKS GRQKIE+ K++ +S  QVTFSKRR+GLF KA+EL  LCGAE+ I+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDSLLDRFLTANFAPP--------KPPEAYLPLAELNRDFENATVEFEFEKRRAA 120
           FGHPNVDS++DRF+  N  PP        +       + +LN        + E EK++  
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 EVEERMRNSRRF--WWDEPMECMGIEDLKRFRSSLLELR 150
           E+++    ++    WW++P+E + +  L+ F+ +L  L+
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of ClCG02G012490 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTF 61
           K+S+GRQKI + K++ +S +QVTFSKRRAGLF KA+EL  LCGAEIGI+VFS + K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDSLLDRFLTANFAPPKPPEAY--LPLA--ELNRDFENATVEFEFEKRRAAEVEER 121
           GHP+V+S+LDR+++ N       +     P A  ELN    +   E E EK++   +EE 
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 MRNSRR----FWWDEPMECMGIEDLKRFRSSLLELRGKV 153
            + S R     WW++P+E M +  L+  + +L ELR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of ClCG02G012490 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 69/176 (39.20%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTF 61
           +K+LGR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  LC AEI I+VFS SGK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDSLLDRFL-------TANFAPPKPPEAYLPLAELNRDFENATVEFEFE---KRRA 121
           GHPNV+ LLD  L         NFA  +     L +  LN        E E E   K+  
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESR---TKLRIQMLNESLTEVMAEKEKEQETKQSI 122

Query: 122 AEVEERMRNSRRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERVEKLAAVRNRGL 168
            + E   +++ ++W + P E     +L +  S   +L     E  EK+A + +R L
Sbjct: 123 VQNERENKDAEKWWRNSPTEL----NLAQSTSMKCDLEALKKEVDEKVAQLHHRNL 171

[Close]

BLAST of ClCG02G012490 vs. TAIR 10
Match: AT1G17310.1 (MADS-box transcription factor family protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.7e-21
Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYTF 61
           K + GRQKIEIKK+E ++++QVTFSKRR GLF K+AELS+L GA+I ++ FS   +IY F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVDSLLDRFLTANFAPPKPPEAYLPLAELNRDFENATVEFEFEKRRAAEVEERMRNS 121
           GH  VD+L+D++L  +   P   E Y          +NA  E                 S
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY--------SGDNAADE----------------ES 163

Query: 122 RRFWWDEPMECMGIEDLKRFRSSLLELRGKVAERV 157
           RR WW+ P+E +  E+L+ + ++L  LR  + +++
Sbjct: 164 RRPWWERPVESVPEEELEEYMAALSMLRENIGKKI 169

[Close]

BLAST of ClCG02G012490 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 99.0 bits (245), Expect = 4.8e-21
Identity = 59/138 (42.75%), Postives = 83/138 (60.14%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIGILVFSSSGKIYT 60
           +KK+LGR+K+EI K+  +S  QVTFSKR+AGLF KA+E   LC A+I ++VFS +GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDSLLDRF--LTANFAPPKPPEAY--LPLAELNRDFENATVEFEFE---KRRAAE 120
           FGHPNVD LLD F             E+Y  L +  LN+ +     E E E   K+  A+
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 VEERMRNSRRFWWDEPME 132
            E    N+  +W   P+E
Sbjct: 122 NERENENAEEWWSKSPLE 139

The following BLAST results are available for this feature:

BLAST of ClCG02G012490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902722.1	2.2e-92	87.98	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
XP_004149713.1	4.9e-68	73.40	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical p...	[more]
XP_008457781.1	3.3e-64	69.86	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agam...	[more]
TYJ99494.1	8.1e-63	77.27	aspartic proteinase CDR1-like [Cucumis melo var. makuwa]	[more]
XP_022986583.1	5.3e-62	70.05	agamous-like MADS-box protein AGL61 [Cucurbita maxima]	[more]

BLAST of ClCG02G012490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	1.1e-25	40.25	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	2.4e-25	44.65	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	3.0e-20	39.20	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	6.8e-20	42.75	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
O64703	3.4e-19	33.95	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of ClCG02G012490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLS2	2.4e-68	73.40	Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1	[more]
A0A5A7TV93	1.6e-64	69.86	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3C5V9	1.6e-64	69.86	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4...	[more]
A0A5D3BKF4	3.9e-63	77.27	Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1JGY4	2.6e-62	70.05	agamous-like MADS-box protein AGL61 OS=Cucurbita maxima OX=3661 GN=LOC111484282 ...	[more]

BLAST of ClCG02G012490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	7.7e-27	40.25	AGAMOUS-like 62	[more]
AT2G24840.1	1.7e-26	44.65	AGAMOUS-like 61	[more]
AT1G01530.1	2.2e-21	39.20	AGAMOUS-like 28	[more]
AT1G17310.1	3.7e-21	39.35	MADS-box transcription factor family protein	[more]
AT1G65360.1	4.8e-21	42.75	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..117
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..159
None	No IPR available	PANTHER	PTHR11945:SF618	AGAMOUS-LIKE MADS-BOX PROTEIN AGL61	coord: 5..159
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 50.62 coord: 27..42 score: 65.84 coord: 42..63 score: 42.16
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 5.1E-30 score: 115.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 16..61 e-value: 1.5E-21 score: 75.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 26.688559
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 18..80 e-value: 1.0E-25 score: 91.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 5..77
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 6..77 e-value: 1.7444E-35 score: 118.039

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G012490.1	ClCG02G012490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding