
ClCG02G012390 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAACCTGCTGGACCAATCTTACTCTAAACACAATATGAAGATGGCCATGTTAAACCATGAACAAACTTTTCGTCACCAAGTAAGTTTTTTTCTTTGTTTAAATTTTTTATAATTTTTTTTTTTAGAGATTGAAAAAAATGAATTTTGTTTGTAGGTCTACGAACTGCACAGATTGTACAGAATCCAGAAGATGTTGATGAAGAACGTAAGAGAAAAAAACAACAGGGGAAAAACAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAATTGATTTTATTGAAGAAAGTGAGATTGAATTAACATTGGGACCATCAAATTATAGTAATCAAATTGGAGGAAAATCAAGAACAAGAAGAAGAAGAAGAATGAAGAAATTGGGTGAAGGTTCAGATTCTGGGATGAGTTTCTCTGCTTCTTCTTCTTCAACCAATGGATCTGCTCATAAAACTAAACATTTTTGCAAAGATGGAGAGTTTGTTGATGGCTCTCAAATGGGTTTTTTGGGATTTCTTGATGTTCAAGATGAAATCAAGCTTTCACATCACCATCCAAATCCATGGCTTTGTCAAGTCGTAAGCCTTAATCTCACTTGA ATGGCTAACCTGCTGGACCAATCTTACTCTAAACACAATATGAAGATGGCCATGTTAAACCATGAACAAACTTTTCGTCACCAAGTCTACGAACTGCACAGATTGTACAGAATCCAGAAGATGTTGATGAAGAACGTAAGAGAAAAAAACAACAGGGGAAAAACAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAATTGATTTTATTGAAGAAAGTGAGATTGAATTAACATTGGGACCATCAAATTATAGTAATCAAATTGGAGGAAAATCAAGAACAAGAAGAAGAAGAAGAATGAAGAAATTGGGTGAAGGTTCAGATTCTGGGATGAGTTTCTCTGCTTCTTCTTCTTCAACCAATGGATCTGCTCATAAAACTAAACATTTTTGCAAAGATGGAGAGTTTGTTGATGGCTCTCAAATGGGTTTTTTGGGATTTCTTGATGTTCAAGATGAAATCAAGCTTTCACATCACCATCCAAATCCATGGCTTTGTCAAGTCGTAAGCCTTAATCTCACTTGA ATGGCTAACCTGCTGGACCAATCTTACTCTAAACACAATATGAAGATGGCCATGTTAAACCATGAACAAACTTTTCGTCACCAAGTCTACGAACTGCACAGATTGTACAGAATCCAGAAGATGTTGATGAAGAACGTAAGAGAAAAAAACAACAGGGGAAAAACAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAAGAAATTGATTTTATTGAAGAAAGTGAGATTGAATTAACATTGGGACCATCAAATTATAGTAATCAAATTGGAGGAAAATCAAGAACAAGAAGAAGAAGAAGAATGAAGAAATTGGGTGAAGGTTCAGATTCTGGGATGAGTTTCTCTGCTTCTTCTTCTTCAACCAATGGATCTGCTCATAAAACTAAACATTTTTGCAAAGATGGAGAGTTTGTTGATGGCTCTCAAATGGGTTTTTTGGGATTTCTTGATGTTCAAGATGAAATCAAGCTTTCACATCACCATCCAAATCCATGGCTTTGTCAAGTCGTAAGCCTTAATCTCACTTGA MANLLDQSYSKHNMKMAMLNHEQTFRHQVYELHRLYRIQKMLMKNVREKNNRGKTEEEEEEEEEEEEGEEIDFIEESEIELTLGPSNYSNQIGGKSRTRRRRRMKKLGEGSDSGMSFSASSSSTNGSAHKTKHFCKDGEFVDGSQMGFLGFLDVQDEIKLSHHHPNPWLCQVVSLNLT Homology
BLAST of ClCG02G012390 vs. NCBI nr
Match: XP_038902582.1 (uncharacterized protein LOC120089237 [Benincasa hispida]) HSP 1 Score: 293.9 bits (751), Expect = 9.4e-76 Identity = 163/178 (91.57%), Postives = 167/178 (93.82%), Query Frame = 0
BLAST of ClCG02G012390 vs. NCBI nr
Match: XP_008457768.1 (PREDICTED: uncharacterized protein LOC103497380 [Cucumis melo] >XP_008457769.1 PREDICTED: uncharacterized protein LOC103497380 [Cucumis melo]) HSP 1 Score: 263.1 bits (671), Expect = 1.8e-66 Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 0
BLAST of ClCG02G012390 vs. NCBI nr
Match: XP_011649318.1 (uncharacterized protein LOC105434616 [Cucumis sativus] >KGN61973.1 hypothetical protein Csa_006670 [Cucumis sativus]) HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65 Identity = 149/180 (82.78%), Postives = 160/180 (88.89%), Query Frame = 0
BLAST of ClCG02G012390 vs. NCBI nr
Match: KAG6571250.1 (hypothetical protein SDJN03_30165, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 203.0 bits (515), Expect = 2.2e-48 Identity = 124/179 (69.27%), Postives = 138/179 (77.09%), Query Frame = 0
BLAST of ClCG02G012390 vs. NCBI nr
Match: KAG7033654.1 (hypothetical protein SDJN02_03378 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 200.3 bits (508), Expect = 1.4e-47 Identity = 122/179 (68.16%), Postives = 136/179 (75.98%), Query Frame = 0
BLAST of ClCG02G012390 vs. ExPASy TrEMBL
Match: A0A1S3C5U9 (uncharacterized protein LOC103497380 OS=Cucumis melo OX=3656 GN=LOC103497380 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 8.6e-67 Identity = 151/180 (83.89%), Postives = 161/180 (89.44%), Query Frame = 0
BLAST of ClCG02G012390 vs. ExPASy TrEMBL
Match: A0A0A0LJL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277640 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 7.3e-66 Identity = 149/180 (82.78%), Postives = 160/180 (88.89%), Query Frame = 0
BLAST of ClCG02G012390 vs. ExPASy TrEMBL
Match: A0A6J1EXP9 (uncharacterized protein LOC111439473 OS=Cucurbita moschata OX=3662 GN=LOC111439473 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 2.0e-47 Identity = 121/179 (67.60%), Postives = 135/179 (75.42%), Query Frame = 0
BLAST of ClCG02G012390 vs. ExPASy TrEMBL
Match: A0A6J1J5Z3 (uncharacterized protein LOC111483758 OS=Cucurbita maxima OX=3661 GN=LOC111483758 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 4.9e-46 Identity = 118/179 (65.92%), Postives = 134/179 (74.86%), Query Frame = 0
BLAST of ClCG02G012390 vs. ExPASy TrEMBL
Match: A0A6J1L6K1 (uncharacterized protein LOC111499640 OS=Cucurbita maxima OX=3661 GN=LOC111499640 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43 Identity = 113/182 (62.09%), Postives = 134/182 (73.63%), Query Frame = 0
BLAST of ClCG02G012390 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 3.9e-11 Identity = 67/188 (35.64%), Postives = 93/188 (49.47%), Query Frame = 0
BLAST of ClCG02G012390 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 3.9e-11 Identity = 67/188 (35.64%), Postives = 93/188 (49.47%), Query Frame = 0
BLAST of ClCG02G012390 vs. TAIR 10
Match: AT1G69360.1 (Plant protein of unknown function (DUF863) ) HSP 1 Score: 49.3 bits (116), Expect = 3.7e-06 Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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