ClCG02G011330 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G011330
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Iron-sulfur cluster assembly protein CyaY
Location	CG_Chr02: 23639398 .. 23650860 (-)
RNA-Seq Expression	ClCG02G011330
Synteny	ClCG02G011330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAAGAGGAGGCGCAGTGCTCAAGGACACGAGAAGGCATGTGAGTTTCCCCGGGACCCAATACTCAAGGACATGAGAAGGTACATGGGCAACCCGTCATATTCCTATGTGCACATAGAGGTTAAACTGGCTACTGCATCGAGCTTGCTCTACTTGAAGCCAGGGATGATTTGGACGTTGGGTGTGTTGAGCCTTGCTCCACCCCAACTAAGGATGTTTTCGACGTTGAGAGCGTTGAGCTTTGCTCCGCCTCAACTAAGGGCAAAGATTGAAAAACCAAACGGTTTTCTATTTAAATATTCTGGAAAACGATTCTATGGAGTTAGAACGGATTTACGTGATTGACAAAGATTTGTGAAAAATCTGTTTCTGTTGAATTAACGTGTTAAATCCTTATTTTAATGCGTATTACTGTAACATGCCTGTTTTCGAATAAAAGATAGTTTTACAAAACTTGTCACTCACGGGGCTTTAGCTCACGTTTTCCCATGTTTTCTAATTTTCCAGGTAGCAAGCGAGTTCAGAATGCTTTGCCTATGCAAGAACCTCGTCTGGGCCGTCTTGGGTAAAGAAATGGTTGGTCAGTGAACCTTACAGAGGAGTCAAGGTTGCTGACTTCACATCTTCTTTCGGGTTATGGAGGATAATTCGGGAGGGGGGTGTGACATTCGTCGTGTTTGGACCTGACGATGTCAAGGTGTATCATAATCTCAAAGTCAATGGTATGCCATTGATGGAAGGGAAAATGATGGACTCCATCTACTTTATGTCAATAGAGGTCGACTACGTGAATAAGACATGGAAGAATGAAACAACAAATTTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGTAAATTGAAGACAATGATAAACAAGTCTATGCTTAAGCGACTGCCTCAACTTGATATCAAAGAAGATATGGTATGTGTTGGTTGCCAATATGGGAAGGCGTATCAACTACCATTCAAGGAGTCCAAATTCAAAGCAAAGCAACCATTGGAGCTGGTGCATTCTGACGTATTTGGTCTTGTTAAGTAATCTTCAATCAACGGTATGCACTACATGGTGGCCCTTTATCGATGACTTCTCCAGGTATGTTTGGGTGTTCTTTATGAAAGAGAAGTCTGAAACAATTATAAAGTTTAAAGAATTCAAGGAACAAGTTAAAGGTGAATTAGGAAAGAGAATTCAATGTCTACGTACAAATAACGAAGAGAATATATGTCTAATGACTTCTCTCAATACTTGCAAAAGTATAAGATACGTCATCAATTGGCATGTCCAAACACTCCACAACAAAATGGAGTGACATAAAGGAAAAATAGACATTTTGCAGAAGTATGTCGTAGCATGTTACATGCAAATAATGTGCCAAGAAGATTTTGGGCTAAGTGCATCAGAATAGCAATCCATGTGGTTAATAGACTTCCCCAATAGAGGCTTGGGTTCAAATTGTCTTATGAAAGGTTGTTGAATATCAAGCCAATGGTTGGACACTTTTAAGTCTTTGGTTGTGTGTGCTATGTTTTTGAACTAGATCACCTGAGAAAGAAGTTTGACAAGAGAGCAATTAGATGCAACTTTGTTGGATATGACAGCCAAAAAAAAGGGTAGAGGTGTATTAATCCTATCAGTGGACGATGTTACACATCAAGGAATGTGATATTTAATGAAACATCATCATGGTGTGCACCCGAATTGGAAAAGGCACCCATAGATGAGAAGTCTTTCAAAGAAGGATCAAAAGAAGAGATAAGTCAAGTTCAACATGCTCTAATAGAAGGAGAAGAAGAAAACGATGAAGATGATGAAGAGCAGTCAATGACACAAAGTCCTTGGCAAAGTGAAGTTCATAATCAAGAGACACAACTACGAAGATCAACCAGACTAAGAAAACCAAATTCTAGACACGTGAATGCAACATTAGCAACATTTGAAGAGCTAGAAACATATGAAGAAGTATCACAGAACATTCAATGGAGAAAGGCCATGGAAGAAGAAAGGGACGCACTAAGAAGAAATCGAATGTGGGACTTGATGCCAAAGCCTAAAGATGTTAAACCCATATCTTGTAAATGGGTTTACAAAATTAAAATGTGAGTATATGGGACAATAGAAAGATACAAAGCTCGATTGGTGGCTCGAGGGTTCTCTCAATAGTAAGGCTTGGACAATGATGAGACATTTAGTTTTGTAGCAAAGCTCACCACTGTTCAAGTCTTATTAGCATTTGCTGCTAGTAAGGGTTCGAAGCTATGGCAGATAGGTGTTAAGAATGCTTTCTTAAATGGAGAGCTAGATTAAGATATATACATATATGGAACAACCAATAGGATTTGAGGATGAAGCTCATCAAGACTATGTTTGCAAGTTGAGAAAGACTCTATATAGTTTAAAGCAAGCACCAAGAGCCTAGTATGGGAAAATTGCAGAATTTCTAGTTGAAAGTGGCTTTACAGTAACTCTAGCGGATTCCAGCTTATTTGTCAAGCTCAAGGCTCAAAGGTAACAATCATATTAGTCTCAGTGGATGATGTAATCATAACAGGAGAACACATAGAAGAAGTTCGACAAATAAAGCAGAATTTACTAGTCCGATTTGAAATGAAAGAACTTGAAGAACTAAAACATTTCCTCGAGCTAGAGGTGGAGCAGTTAGAGAAGGGATTGTTTCTTGGACAACAGAAGTATGTAAAAGATCTTTTACAAAAATTTGGCTTGAGTGACTAGGAGCCAATATCTACACCAATGGAGGTTAATACATGCACGAAGGTAAGATCTTGCAGACTCAACGATGTATCGTCAGTTGGTAGGTAGTTTGATATACAACAGTAACTAATCTAGAGAGTTATTGAAGTATCAACAAAAATACATAAATGTATAAATTAGGATTCTCTACAATTATGTTGAAATATGTAAATTGTAAGTAAATACCACAAAAATAAAGATCTAGAATTATCCTAGGTTTTCTTTAGGTCTAAGGAATTCGAGAATTTCTTTAGATAAGAATAAACCAAGATAAATCTTTTGCTTGGTTCCAAGGATCTCATGCTTATAAATAGGAGGTGACCCCATATGTGAGCCAAGCAAAAGTTAGAGAGTTAGTGAAGAAAAGTAAAAGAGTGAAAGAGTAATCTCCAAGTGTCCATCCTTGTATATTCATAATAAAAATTTATTTCTTTCTCCCAAGAGATTGTCTGTCTTCTGTGACAATTTCTTCAACATTTGTATGATTTTTGAAGATAATGGATCAGTTGGGTTATGAAAATTAAACCCAATTGTAATGTTGGGTTTAAATGTTGTAATCTTAAGTCAACAATTGCCTATGTGGTTTCCATGTTCAAGACAAACTTAACTTGCGACTAATTTATAGTTTTAATTTAGGTTAATGGGTTTAATTTAGGATAGTGCCTGAAGGGAAGTAGTTTAATGGCTTAGTGGCAATGATAGAAGAGAATGTTAAGGTTAGTGGTAGAGTTTTAAGGTTAGTGGCGTGCATTAGTGGTTAGTTCTTTATTTGCCTATAAATACTTGTAATGTTTCCAATTAAATTGAAGCACTTGATTCTCCGTGCAATATTTTTCTCTTGTTTCCATCTTTCGTTCTCTTGATTTATTACTTTTTGTTATATGTTATCAGAGCATTCAGGTTCTTTGTTTTGCATTGGAATTTAAATAATTGGTGAAGATGAATGGTGGAAATAATATTTGTGTAGACAAGCTTAATTATCAGTAATAATTATAGCTATTGAAGGCTATGTATGAAAGTTTTTCTACAAGGACAAGATTTGTGGGATCTTGTTTCCGATGATGATTCAATTCCAGAAGATACTTTGGAGAATGCTAAAACACAAAGGAAGTGGAAAGTCAAGCAGAGCAAAGCTTTAATTGCTTTGCGAATTTCTATGGGTAAGGAGTACATCAAGTATGTTTCTGATGAGAATTTTTCAAAAGAAAAAAAAAAAAAATAAAGGTGTGGGAGACACTTGAAAGGTTGTTTACTCAAACACACACAATAAGATTGTAAATATTTAGATAAAGAAGTTGCTGGAAACGACTCAAGGTAATTGTTTGATTTCATAATATTTTCTGAAAATTAAAACTTTACGTACTGAAATTTTAGAATTGGACAAAGAGGAACCTACCAGTGATGCTCGTCTGCATAATTATCTTATTCATGGATTGCAAAATAAGTTTATGTCATTCATTTCATCGATACAAGATTTGGTAAATCAACCTAGAAATTTTTCTCTCAAATCAAGAAGCATTAATGAACCAAATGATTGGTAATAACAAGCAATCTCATTCCAAGGTGAAAAGCTATTCTTCATACAAAAAACAAGGGAAACTTAAACAAATGTAGTTTATCCTAGTTGTCAATATGGTAAGTCACATTACCTTCCATTCCCAAATTCAAACAATGGATCTCCTAGTTCAAACAATGGATCTCCTAGTGTAATGCAGTTAGTTCATTCATATTTGATGGGACCTATTAGAACACCCAACTATTTTAGTTGTCATTTGCACTAAAAATTTATTTATGACAAACTAAGGTTACATTAATGAAAGTATACCCTCCAAGCTACTTCAAGTGAGCTCATTTGTACATGGTGGTTACAAGGAATTTCAACATAACCAATGAAATCAATCTCAAATTTATGGCTTATTTTTATCAAAATTTCAAATTTAAATATTTCTTTTATTTTTTTTTGGATGATATCTATTTATACTCTTAAACTTTGGAGATGTATCAATTTAAACTCTAAATTTTGTAAGTATATCAATTTACACTCTTCATTACATTTCGTTTGGAATAACTATCGTGTAAGACTTATAATTGATCCATTAACTAAACTCCAATATAAACTTTGAAAAATAAATCAATTTAGATGTATAAATAATTGCTCACTAATACTAGGTAGATATCAAGAATAGTTTCACAAATAATAGTATGTTGATGTCCCTGATTTTGGAGTCTATAGGCTTCTTACTCATTGTCTGATATGATTTGAGCTTGTGGTTGTGTTTCCATCACTTTTTTTTTTATCCTCTTCCTAATAAGTGATTGGAGCATATTATTTGTTGCCCCCTTTTTTTAACTTTATTCATTGGTATTGCACACATTGATTTTATTGGCTTGTTTATATTTATATTTACCCCTTTTCTGTTGTTTTTGCTTGAATGTTTTGAGAGTTGCATATTTCACCCGTTCAAGCTTTATGGTTGGAGATATCTTTTGAGATTTCTTAGTGTCTTACTCTTCAAGAAAGATAAAAGTGAAGACTCTATTGTAATATCTACTATGTTTTAGCGACAAAATGGTCCTATCACTTTGGTTATCTAATTTATATTGTTGGATTACATTTAGTGAATGCTTTAATCTTGTATCATTTGAATAACTTTCTTATTCTAAAAAGTTATTGAATATTTTATTAGTGCATAAAGATTATGAAGTTTCAATTATGAACGGAAGCCATATGATTTAATATGTTAACAAAAAAATGAATGTTATGAAAATGTGACTGCAATAACCATAGCAATGAAAAACGAATAAATAAGTTTATTATAGCATAAGATTAAGGGTATTGATAGTATATAATAGCCCTAAAAAATGCTATTATAAGCAAATGATAGCAATATTTTAGCTATGTGAAGATATTATAACTTTAAGTAAAAATGCTATCAAATGTTTTCATAGTAATACATATAATACCTTTGTACTATTTATAGCATTTGTTATAGTTATACAAAAATGCTATAAAAAGTCTTAGACATTTAATAACAGAGTCTGTTAGGACCTACGTGAAAACGCTATAAAAGCCTTTTTATAGTTTTTTCATTAGCTATCGTATCTGTTATTTCTTGTAGTGATCGTCCATTTTGTAAAACAGACATTTGAAGAAATATACACGTACGACAATTGATGCAGGGATGTTTTCAAATGTAATTATAAAGAAAGGTCTAAATTGACTTGCTTATGTAAATTTATAGATTTAATTAACACAAATTATAAGTTCCATATGAAATTCGTCCAATAAAATCTAGAGAAAAGTATAAATTGATACACTTATAAAAATTTAAGATTTAAATTAATATAATTGATCATCCAAGATTTTAATTGATACAGTTCAAAATTTAGAAATATAAATTACGTTGATGTTTTCAACGTTGCTTTAGAGTTGTTGGTTGTTATTAACATTATATTACTTGTAGGGCTTATTTGCTGTATATACTCCCAACTAATTCGTTTGTAGACTCCAAATTTTGAAATGTAATGAAAATAACTTTTTGGAAGTAATTATTTTTTTTTATTGTAATTTTATAAAGTTTAGGTTGTATTTTTTAGAATCATCTAAGTTTGACTTGATAAATTTTACTTGTGTAGTAATTCAAATCTCAAACAATAAATAATCTTTCTTACTTTGAAATATTTGATCCCCGAAGTAATCGTATTTTTCACTTTTCTTTAATTGATTTTCAAATTCATTTAGGGAATTTTGAGGTTGAGTTTTGTGAGTTTTTGTTCTTCGACAAGGGTTTAGATTTAACATCAAATATTATAAATCGTTAGCAAGATATTTTTGTTTATCTGCATTGTTAAAAAAAGTTGGAATTAGTTTACCCCGGAACTGAAAATACAAGGGATAAAGTTAATGTCAAGGAGATAAATAGTTCTAAAAAAGTAATTTTGACTTAGACAAGAAAATAACATTAAAGAAAATCGTTTACATATAACAAAATCCTATTACTACTAAGAGAATCCTAGTAGCATTTGAGTAACTTAAGTTGTTGAGTCAAAAACAAAAACTTTATTTAGAGGTTCATTGAATTGACCTTTAAGTGCTTAAAAAAATATTTTTAAGTAAAAAGAAAAAGGTGTTTTTTAAACACTCTCAATCTGGGAAAAAAATAAAACTCAAAGTAAATTAAATTGGAAAATTCGATTTTACAAAATAATAATTCAAAAAACAATACAACTCGTGGGCCCATAGAAAGCTTACGTCCCAACCAAAGCCTAATTGGAATGTGGCCTTGTCTGGGTCCATGTGGTTAATTGGAGGCCCATTTACAAATGTCTTCACAAACTGTGAGCGAGCGTGCTTTCCAGTTTGAACTTGAAGCCGGTGGATGTAACGATGGCTACCAAACTGCTTTCCCTGCGTAAGCTTTCAAGGATACTCAAACTGCCATCTTCTTCTTCTTCCTCTTTCAGGAAGTGTTCATATCTTCTTGAAGCTTCAAGACCTCTCCTCGATCTCTCCAACGATGTTCATCAATTTCATCCTCCGTATGTTACTCGAAGATTCTGCTCCCCCCCTCTGCATTTCGTCGGCGATGATTCTCGAGGCCCTGCCGCCATTGATTATAGGTAATTTGTTCCTCCCCTGTCCTTCATTTTCCTTTTTTTTTTTAATTTTATTGTAAGAGAAACTGTGTATTTGATTAGAAATCTTGTAGATGAAATGGAAGTTTTAAGTTCCAGCCCTTCCCCCAATTTTTTTTTTTTTGCAATTTTGGAACATTTTCAAATTTGCTGATTGTTTTTGGTCTACTTGATTTATTTGCCAATTCTTGTTCCCCTGCCTCTAATTCTCTTATCTGATTCTAAACGAAACAAAAATGGCTTCGCGTTCCTTCAATACAGTGTTGTGGATGTCTTACCATCAGTTCAATTTTCTTTAATTGTACAAATCAGTTGATGGGGTTTTCTTTGAGCTCCGATATGATAGTTGAAGGAATTTGATAGAGAGGAGCTCAAGTGATCTTGGCTAATGTTTGCTGCAGTTCTCTGATGCAGGAGGGAGAGTTTCATAACCTAGCTGATTCCACAATACAGGGACTGCAAGAGAAATTAGAGGTAATTTTGTATCGTTGAACTTGATTGTATCCTATAAGCCAAAGGTAACTAATAGCTTATATGTTTCGTTTACATAATTTGGAATTGCTGTTGAAATTTTGTGAACTTTATTTTATTGCTTGCCAGGAATATGGCGATAATCTCCAAATTGATGGCTTTGACGTGGACTACGGGGTGAGAATGACTAAGCAGTTCTAAAGTTGTTTTATTCATTTCATATGAATAGATGATGTTTAACTTTATCCGATTTTCATTAAGCAGAATGAGGTACTGACCTTAAGGCTTGGCAATCTTGGCACTTACGTCTTGAACAAACAAACACCAAACAGACAAATTTGGCTTTCTTCCCCTTTGAGGTATGAATTATGCTTCAGGAATGATTAGAATATACAATGTTTATCCTTTCCATTCATTTCAAAGATCATTTCAGGCCTTGTGTTTCCATTTCATAGCAAAGTCCAGCGATGGGCTTTTTAATGTCTTTAGTAAAAAATCAGATCTTTTTAATGTTTACCCTATATGTCTTTAACTTATATTAGCGTTAAAAGACACCTTGATCATATCCTTAGAAATTGTGATTTCGCTCGGGTCAGTGTGGTTTCTTTGAGGTGTTTGGCTTTAGCTTTTCACAAATTCTTAGGGTGCAGAGAGACGATTGAGGAGTCATTCCTCTATCTGCCTTTGTGTGAGAAAGGTTTGGAGAGCGTGTGGTGTTGTGCTGTTCTGTGGGATTGGGGGGAACAATCGAATCTTTAGGGGGTGGGAAAGTTCCACCATCGATGTGTTAGGCGACCAATCCTATTTCAATATCAGAGAAGGGGTAAGAAAGTCATTGCAGAGGAAACCATTGCAGCTGATGTGGGGAATGCCAAGTGTGTGTGTTTGTGGGGGGGTATATAAATTGTTGTCGGTAGGGTTGAGAGGCTAGGTTGTTTCTGAAGTAATTCTTAAGAGAGAGAAGAGTGAAGTTGTGTAATCTCCTTCGGGCATTTTGTTTTTGAATATCAACACCACAGTAAGGGAATCCTACACATTGGTAGCAGAGCACTCAACTTGGGAAGGTTAGGCAAGATAGTGCAAAAGAAAATTGAAGGACGATTAGATGTTACAAATCGGGAGCATGGAGAAATTAAGAAGGAAATGAAATAGATACCTGCGATTGAAGAGATGCTTGCAATGTTGGCAAAGAGTATGGAAAGCTTAATGACCAAACGGAAAAGCAACATTGAACTTTTGATGAGACTCGAGAACTTCAGATGCCAGTGGTCATGAATCGCTCCATAGGGTCAACATCGGAGAAGAATCGAGTGGTGTTGTGAGGTTGATGGAGGAAATGGGGGAGTCGACATTGAACGTAGAAATTTTGCGCACGAACAAGGGTAAGGATGGCAACTATGACCGGATTAAGTTCAAGAAGGTTGAAAAATGCCAGTGTACAATGGGAATGACCCCGATTCTGGGTTGTTTGGAGCTGCTTATTACTTCCAAATCCATAAGTTGACGGAATCAAAGAATATGACTGAGGCAGTGATTGGTTTTGAAGGTGTAGTGTTGGATTGGTATCAAACGAAAGAAGAACACAACCAAGGATTGGAATGACCATGAGATATGTTTGCTAGAGCAGTTTAGATCATCTTTGAAGTGGACAGTGTGTGGTCAATTTCTAGCGATCAAACTAGAAACAACTGTGGAGGCATGTCGGAACTTGGTGCCATTATCTCAGTTGACAAACTAGGTACTAGAAAATACATTCATGAACGGGCTAGAACCATGGATCAAGGCTAAAGTTGAATGTTGAGAACCCATTGGGGTGGTTAGAATGATGTCTAGCCCAATTAATCGCGAATTGCAAACTGACCTGTTTAGAAGCAGGCCTCAATGGCCTAACGCCGCGAGCTAAGGGAAGAAAACGGTGAAAGGCTCTTTAAATTCAAGATTCTTTTAACACTTTGCTCTTTCTATAAGCATGGTTGGAAAGAACACGAAAAAACGTATGAAAACATGTGGTCGTTACCGTATGAAAACAAGAAACACAAAAGGACATGCATACTCTTTTGTTCTACGATTGTGTGATTACATAGCTCTCTTTATGTGATTTTGTTTTGGTCATTTCTCTGTTGATACAACTCTGTTTTTGCTAAACGATCGCTTGTTTCAATACCTTTTTCGTGTTCTTTCCAACCATGCTTATAAATTTAGCAAAATGTTAAAACATCTTCACTTTTAAATAACCTCACAAAGTTTAAAGTTAGATCATTTCTGGTATTTGATGTTTTGGTAATATAAGGGTAAAATGATGCACTCCTCATAAATGTCAGAAGTATGTTTTTTTAATTAAAAAAGAATATCATTTGTATAGAACTTTTCGAGGTTTGGGTCCTTTTGAGCAATTTTTGGAGAAGAGAGGAGTTGTGTAATCACCTCCGGGCATTTTATTCTTGAATATCAATACCATAGCAAGGAAAATACCTTACACGATGTTTGATCTTTAATTCTCTCTTGGCCTTGGTTTCTAGACTTTGTTGTAATTACTCTCTAGGTGTCATTTTACTTGATTGGAGCCCCTTTTGATTGGAGCCCTTTTTGTTGTTGGCCCTCCTCTTTGTGGGCTTTTCCTTTCGTATGTCCATATGAATTTTCATCTTTTCTCACTGAAAGTCCAACTTTTCATTATTGTTAATATTGCTTTTCTTAAAGAAAAAAAAGCTTGAAACTTAAAACTTATATTAAAGCAGAAAAGAAAGGATGGGACTATTTTTAGTTTGGTCCTGAGACAATGTAATCCTCATACAGGTTGGTTATTTATATAACTTAGGCATTGTACACAAACACCCTAGAATATAGTGTAGTTGTTTGTGTATGCTCTTGTATTCCTTCATTATTTTTTTATGAAAGTTTAGATTGTCATTGTACACAACTTTATGACACCCTAGAATATAGTGTAGTTGTTTGTGTAATGCTCTTGTATTCCTTCATTATTTTTTGATGAAAGTTTAGATTGTTTTTTAGAAAAAAAACCTTTGTGACAACCCAGGTTATGTACTATCTTGCAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCTCAGGCTTGGATTTATAGGCGGAACAAAGCAAACTTGTTGAACCTTTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGATCTTTCTTGAGCTGTTTTAAATAACTGGGGCAGGTTAAGTGAAGCACTTCGACGCATATTTACGTAGCTCGTTCAATTTGGTTCACGTTCTTAATTATGACCAGAGCCCCATTTTTCTTATTTTGGTTCTACCTGTTGCATATTATATGCAATCACATGGATTTCTAGTGCGTCAACTATAACATTTAATAATTAACATATACTTAACGGATCATAGATCAATTACTCATGATATAAAACATTCTTTTGAAAGGTCAGAAATTTAAGTTACCACCCTTGGTTAGAATTCAAATTTCTGTATGTATTCATACATACACGGTATTACAATCTATGAGAATTTAGGTGAGAAGGGAGTAGTTATGATGATTGAAATTGTTTATTTGTTGAGTACTTGTATATATATTAGTTAGGGAGGGTTGGAGATGA

mRNA sequence

ATGTTTAAGAGGAGGCGCAGTGCTCAAGGACACGAGAAGGCATGTGAGTTTCCCCGGGACCCAATACTCAAGGACATGAGAAGGTACATGGGCAACCCGTCATATTCCTATGTGCACATAGAGGTTAAACTGGCTACTGCATCGAGCTTGCTCTACTTGAAGCCAGGGATGATTTGGACGTTGGGTGTGTTGAGCCTTGCTCCACCCCAACTAAGGATGTTTTCGACGTTGAGAGCGTTGAGCTTTGCTCCGCCTCAACTAAGGGCAAAGATTGAAAAACCAAACGGTTTTCTATTTAAATATTCTGGAAAACGATTCTATGGACAAGCGAGTTCAGAATGCTTTGCCTATGCAAGAACCTCGTCTGGGCCGTCTTGGGTAAAGAAATGGTTGGTCAGTGAACCTTACAGAGGAGTCAAGGTTGCTGACTTCACATCTTCTTTCGGGTTATGGAGGATAATTCGGGAGGGGGGTGTGACATTCGTCGTGTTTGGACCTGACGATGTCAAGGTGTATCATAATCTCAAAGTCAATGGTATGCCATTGATGGAAGGGAAAATGATGGACTCCATCTACTTTATGTCAATAGAGGTCGACTACGTGAATAAGACATGGAAGAATGAAACAACAAATTTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGTAAATTGAAGACAATGATAAACAAGTCTATGCTTAAGCGACTGCCTCAACTTGATATCAAAGAAGATATGGTATGTGTTGGTTGCCAATATGGGAAGGCGTATCAACTACCATTCAAGGAGTCCAAATTCAAAGCAAAGCAACCATTGGAGCTGGTGCATTCTGACGTATTTGGTCTTGTTAATGGACGATGTTACACATCAAGGAATGTGATATTTAATGAAACATCATCATGGTGTGCACCCGAATTGGAAAAGGCACCCATAGATGAGAAGTCTTTCAAAGAAGGATCAAAAGAAGAGATAAGTCAAGTTCAACATGCTCTAATAGAAGGAGAAGAAGAAAACGATGAAGATGATGAAGAGCAGTCAATGACACAAAGTCCTTGGCAAAGTGAAGTTCATAATCAAGAGACACAACTACGAAGATCAACCAGACTAAGAAAACCAAATTCTAGACACGTGAATGCAACATTAGCAACATTTGAAGAGCTAGAAACATATGAAGAAGTATCACAGAACATTCAATGGAGAAAGGCCATGGAAGAAGAAAGGGACGCACTAAGAAGAAATCGAATGTGGGACTTGATGCCAAAGCCTAAAGATGTTAAACCCATATCTTGTAAATGGGTTTACAAAATTAAAATTAACTCTAGCGGATTCCAGCTTATTTGTCAAGCTCAAGGCTCAAAGGTAACAATCATATTAGTCTCAGTGGATGATGTAATCATAACAGGAGAACACATAGAAGAAGTTCGACAAATAAAGCAGAATTTACTAGTCCGATTTGAAATGAAAGAACTTGAAGAACTAAAACATTTCCTCGAGCTAGAGGTGGAGCAGTTAGAGAAGGGATTGTTTCTTGGACAACAGAAGCTATGTATGAAAGTTTTTCTACAAGGACAAGATTTGTGGGATCTTGTTTCCGATGATGATTCAATTCCAGAAGATACTTTGGAGAATGCTAAAACACAAAGGAAGTGGAAAGTCAAGCAGAGCAAAGCTTTAATTGCTTTGCGAATTTCTATGGGTAAGGAGTACATCAATTTGAACTTGAAGCCGGTGGATGTAACGATGGCTACCAAACTGCTTTCCCTGCGTAAGCTTTCAAGGATACTCAAACTGCCATCTTCTTCTTCTTCCTCTTTCAGGAAGTGTTCATATCTTCTTGAAGCTTCAAGACCTCTCCTCGATCTCTCCAACGATGTTCATCAATTTCATCCTCCGTATGTTACTCGAAGATTCTGCTCCCCCCCTCTGCATTTCGTCGGCGATGATTCTCGAGGCCCTGCCGCCATTGATTATAGTTCTCTGATGCAGGAGGGAGAGTTTCATAACCTAGCTGATTCCACAATACAGGGACTGCAAGAGAAATTAGAGGAATATGGCGATAATCTCCAAATTGATGGCTTTGACGTGGACTACGGGAATGAGGTACTGACCTTAAGGCTTGGCAATCTTGGCACTTACGTCTTGAACAAACAAACACCAAACAGACAAATTTGGCTTTCTTCCCCTTTGAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCTCAGGCTTGGATTTATAGGCGGAACAAAGCAAACTTGTTGAACCTTTTAGAAACTGAATTGGCGCAGCTCTGTGTTAGGGAGGGTTGGAGATGA

Coding sequence (CDS)

ATGTTTAAGAGGAGGCGCAGTGCTCAAGGACACGAGAAGGCATGTGAGTTTCCCCGGGACCCAATACTCAAGGACATGAGAAGGTACATGGGCAACCCGTCATATTCCTATGTGCACATAGAGGTTAAACTGGCTACTGCATCGAGCTTGCTCTACTTGAAGCCAGGGATGATTTGGACGTTGGGTGTGTTGAGCCTTGCTCCACCCCAACTAAGGATGTTTTCGACGTTGAGAGCGTTGAGCTTTGCTCCGCCTCAACTAAGGGCAAAGATTGAAAAACCAAACGGTTTTCTATTTAAATATTCTGGAAAACGATTCTATGGACAAGCGAGTTCAGAATGCTTTGCCTATGCAAGAACCTCGTCTGGGCCGTCTTGGGTAAAGAAATGGTTGGTCAGTGAACCTTACAGAGGAGTCAAGGTTGCTGACTTCACATCTTCTTTCGGGTTATGGAGGATAATTCGGGAGGGGGGTGTGACATTCGTCGTGTTTGGACCTGACGATGTCAAGGTGTATCATAATCTCAAAGTCAATGGTATGCCATTGATGGAAGGGAAAATGATGGACTCCATCTACTTTATGTCAATAGAGGTCGACTACGTGAATAAGACATGGAAGAATGAAACAACAAATTTGTGGCATGCAAGACTTGGTCATGTTAGCTACAGTAAATTGAAGACAATGATAAACAAGTCTATGCTTAAGCGACTGCCTCAACTTGATATCAAAGAAGATATGGTATGTGTTGGTTGCCAATATGGGAAGGCGTATCAACTACCATTCAAGGAGTCCAAATTCAAAGCAAAGCAACCATTGGAGCTGGTGCATTCTGACGTATTTGGTCTTGTTAATGGACGATGTTACACATCAAGGAATGTGATATTTAATGAAACATCATCATGGTGTGCACCCGAATTGGAAAAGGCACCCATAGATGAGAAGTCTTTCAAAGAAGGATCAAAAGAAGAGATAAGTCAAGTTCAACATGCTCTAATAGAAGGAGAAGAAGAAAACGATGAAGATGATGAAGAGCAGTCAATGACACAAAGTCCTTGGCAAAGTGAAGTTCATAATCAAGAGACACAACTACGAAGATCAACCAGACTAAGAAAACCAAATTCTAGACACGTGAATGCAACATTAGCAACATTTGAAGAGCTAGAAACATATGAAGAAGTATCACAGAACATTCAATGGAGAAAGGCCATGGAAGAAGAAAGGGACGCACTAAGAAGAAATCGAATGTGGGACTTGATGCCAAAGCCTAAAGATGTTAAACCCATATCTTGTAAATGGGTTTACAAAATTAAAATTAACTCTAGCGGATTCCAGCTTATTTGTCAAGCTCAAGGCTCAAAGGTAACAATCATATTAGTCTCAGTGGATGATGTAATCATAACAGGAGAACACATAGAAGAAGTTCGACAAATAAAGCAGAATTTACTAGTCCGATTTGAAATGAAAGAACTTGAAGAACTAAAACATTTCCTCGAGCTAGAGGTGGAGCAGTTAGAGAAGGGATTGTTTCTTGGACAACAGAAGCTATGTATGAAAGTTTTTCTACAAGGACAAGATTTGTGGGATCTTGTTTCCGATGATGATTCAATTCCAGAAGATACTTTGGAGAATGCTAAAACACAAAGGAAGTGGAAAGTCAAGCAGAGCAAAGCTTTAATTGCTTTGCGAATTTCTATGGGTAAGGAGTACATCAATTTGAACTTGAAGCCGGTGGATGTAACGATGGCTACCAAACTGCTTTCCCTGCGTAAGCTTTCAAGGATACTCAAACTGCCATCTTCTTCTTCTTCCTCTTTCAGGAAGTGTTCATATCTTCTTGAAGCTTCAAGACCTCTCCTCGATCTCTCCAACGATGTTCATCAATTTCATCCTCCGTATGTTACTCGAAGATTCTGCTCCCCCCCTCTGCATTTCGTCGGCGATGATTCTCGAGGCCCTGCCGCCATTGATTATAGTTCTCTGATGCAGGAGGGAGAGTTTCATAACCTAGCTGATTCCACAATACAGGGACTGCAAGAGAAATTAGAGGAATATGGCGATAATCTCCAAATTGATGGCTTTGACGTGGACTACGGGAATGAGGTACTGACCTTAAGGCTTGGCAATCTTGGCACTTACGTCTTGAACAAACAAACACCAAACAGACAAATTTGGCTTTCTTCCCCTTTGAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCTCAGGCTTGGATTTATAGGCGGAACAAAGCAAACTTGTTGAACCTTTTAGAAACTGAATTGGCGCAGCTCTGTGTTAGGGAGGGTTGGAGATGA

Protein sequence

MFKRRRSAQGHEKACEFPRDPILKDMRRYMGNPSYSYVHIEVKLATASSLLYLKPGMIWTLGVLSLAPPQLRMFSTLRALSFAPPQLRAKIEKPNGFLFKYSGKRFYGQASSECFAYARTSSGPSWVKKWLVSEPYRGVKVADFTSSFGLWRIIREGGVTFVVFGPDDVKVYHNLKVNGMPLMEGKMMDSIYFMSIEVDYVNKTWKNETTNLWHARLGHVSYSKLKTMINKSMLKRLPQLDIKEDMVCVGCQYGKAYQLPFKESKFKAKQPLELVHSDVFGLVNGRCYTSRNVIFNETSSWCAPELEKAPIDEKSFKEGSKEEISQVQHALIEGEEENDEDDEEQSMTQSPWQSEVHNQETQLRRSTRLRKPNSRHVNATLATFEELETYEEVSQNIQWRKAMEEERDALRRNRMWDLMPKPKDVKPISCKWVYKIKINSSGFQLICQAQGSKVTIILVSVDDVIITGEHIEEVRQIKQNLLVRFEMKELEELKHFLELEVEQLEKGLFLGQQKLCMKVFLQGQDLWDLVSDDDSIPEDTLENAKTQRKWKVKQSKALIALRISMGKEYINLNLKPVDVTMATKLLSLRKLSRILKLPSSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYVTRRFCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETELAQLCVREGWR

Homology

[Close]

BLAST of ClCG02G011330 vs. NCBI nr
Match: KAA0046986.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 444.1 bits (1141), Expect = 2.4e-120
Identity = 276/563 (49.02%), Postives = 306/563 (54.35%), Query Frame = 0


Query: 161 FVVFGPDDVKVYHNLKVNGMPLMEGKMMDSIYFMSIEVDYVNKTWKNETTNLWHARLGHV 220
           FVVFGPDDVKVYHNLKV+G PLMEG+ MDSIY MS E  YVNKT KN+T +LWHARLGHV
Sbjct: 230 FVVFGPDDVKVYHNLKVSGTPLMEGRRMDSIYVMSAETAYVNKTRKNDTADLWHARLGHV 289

Query: 221 SYSKLKTMINKSMLKRLPQLDIKEDMVCVGCQYGKAYQLPFKESKFKAKQPLELVHSDVF 280
           S SKLKT+INK+MLK LPQLDI+EDMVC GCQYGKA+QLPFK+SKF+AKQPLELVHSDVF
Sbjct: 290 SCSKLKTIINKTMLKGLPQLDIREDMVCAGCQYGKAHQLPFKDSKFRAKQPLELVHSDVF 349

Query: 281 GLV--------------------------------------------------------- 340
             V                                                         
Sbjct: 350 DPVKQSSVSGMRYMVTFIDDFFRLPQQRLEFKSPYEKLLNIKPTVGHFRVFGCVCYVFVP 409

Query: 341 --------------------------------NGRCYTSRNVIFNETSSWCAPELEKAPI 400
                                           +GRCYTSRNVIF+E SSW  PE EK+  
Sbjct: 410 DHLRSKFNKKAIRCIFVGYDNQRKGWRCVDPTSGRCYTSRNVIFDEASSWWIPESEKSTK 469

Query: 401 DEKSFKEGSKEEISQVQHALIEGEEENDEDDEEQSMTQSPWQSEVHNQETQLRRSTRLRK 460
           +EKSFKEGSKEEISQVQ A  E EE NDED+EEQ  TQSPWQS ++NQE QLRRSTR+RK
Sbjct: 470 NEKSFKEGSKEEISQVQQAPTEAEEGNDEDEEEQVRTQSPWQSGIYNQEPQLRRSTRIRK 529

Query: 461 PNSRHVNATLATFEELETYEEVSQNIQWRKAMEEERDALRRNRMWDLMPKPKDVKPISCK 515
           PNSR+VNA LATFEE  TYEEVSQ+IQWRKAMEEE D L++N  WDL+PKPKDVKPISCK
Sbjct: 530 PNSRYVNAALATFEEPATYEEVSQSIQWRKAMEEEVDTLKKNHTWDLVPKPKDVKPISCK 589

[Close]

BLAST of ClCG02G011330 vs. NCBI nr
Match: KAG6604827.1 (Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.9 bits (842), Expect = 1.1e-85
Identity = 165/192 (85.94%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 578 DVTMATKLLSLRKLSRILKLP----SSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYV 637
           DVTMATKLL LRKLSRILK+P    SSSSSSFRK SYLLE++RPLLDLS++VHQFHPP  
Sbjct: 26  DVTMATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSF 85

Query: 638 TRRFCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGF 697
           +R FCS PL FVGDDSRGPA IDYSSLMQEGEFH LADSTI GLQEKLEEYGD+LQIDGF
Sbjct: 86  SRSFCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGF 145

Query: 698 DVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANL 757
           DVDYGNEVLTLRLG LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQ+SQAWIYRR+KANL
Sbjct: 146 DVDYGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANL 205

Query: 758 LNLLETELAQLC 766
           L LLETEL QLC
Sbjct: 206 LRLLETELTQLC 217

[Close]

BLAST of ClCG02G011330 vs. NCBI nr
Match: XP_004139965.2 (frataxin, mitochondrial [Cucumis sativus] >KGN46675.1 hypothetical protein Csa_020912 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.9e-85
Identity = 165/195 (84.62%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 571 NLNLKPVDVTMATKLLSLRKLSRILKLPSSSSSSFRKCSYLLEASRPLLDLSNDVHQFHP 630
           +LN KPVDV MA KLL LRKLSRILKLPS SS SFRK  +LLEAS PL+ + N+VHQFHP
Sbjct: 23  SLNFKPVDVAMA-KLLPLRKLSRILKLPSYSSCSFRKFPHLLEASSPLIHIFNNVHQFHP 82

Query: 631 PYVTRRFCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQI 690
           P   R FCS PL  VGDDSRGPA IDYSSLMQEGEFH LAD  IQGLQEKLEEYGDNLQI
Sbjct: 83  PSFLRSFCSRPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQI 142

Query: 691 DGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNK 750
           DGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQ WIYRRNK
Sbjct: 143 DGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNK 202

Query: 751 ANLLNLLETELAQLC 766
           ANLL+LLETEL QLC
Sbjct: 203 ANLLSLLETELTQLC 216

[Close]

BLAST of ClCG02G011330 vs. NCBI nr
Match: XP_008448200.2 (PREDICTED: frataxin, mitochondrial [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 7.4e-85
Identity = 161/185 (87.03%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 581 MATKLLSLRKLSRILKLPSSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYVTRRFCSP 640
           MATKLL L KLSRILKLPSSSS SFRKC YLLEAS PL+ +SN+VHQF PP  ++ FCS 
Sbjct: 1   MATKLLPLHKLSRILKLPSSSSCSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQSFCSR 60

Query: 641 PLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVDYGNE 700
           PL  VGDDSRGPA IDYSSLMQEGEFH LAD TIQGLQEKLEEYGDNLQIDGFDVDYGNE
Sbjct: 61  PLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVDYGNE 120

Query: 701 VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETE 760
           VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNS+AWIYRRNKANLL+LLETE
Sbjct: 121 VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSLLETE 180

Query: 761 LAQLC 766
           L QLC
Sbjct: 181 LMQLC 185

[Close]

BLAST of ClCG02G011330 vs. NCBI nr
Match: XP_022971111.1 (frataxin, mitochondrial [Cucurbita maxima])

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-84
Identity = 163/189 (86.24%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 581 MATKLLSLRKLSRILKLP----SSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYVTRR 640
           MATKLL LRKLSRILK+P    SSSSSSFRK SYLLE +RPLLDLS++VHQFHPP  +R 
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 641 FCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVD 700
           FCS PL FVGDDSRGPA IDYSSLMQEGEFH L DSTI GLQEKLEEYGD+LQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 701 YGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNL 760
           YGNEVLTLRLG+LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQ+SQAWIYRRNKANLL L
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 761 LETELAQLC 766
           LETELAQLC
Sbjct: 181 LETELAQLC 189

[Close]

BLAST of ClCG02G011330 vs. ExPASy Swiss-Prot
Match: Q9ZR07 (Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2)

HSP 1 Score: 193.4 bits (490), Expect = 9.8e-48
Identity = 104/184 (56.52%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 588 LRKLSRILKLPSS--SSSSFRKCSYLLEASRPLLD----LSNDVHQFHPPYVTRRFCSPP 647
           LRKL R LKL  +   S+  R  S L++ S   LD    + + +   H    TR F    
Sbjct: 9   LRKLPRFLKLSPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIR--HDSLTTRSF---- 68

Query: 648 LHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVDYGNEV 707
                  S+GPA++DYSS++QE EFH LA+ TI  L EK+E+YGDN+QIDGFD+DYGNEV
Sbjct: 69  ------SSQGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEV 128

Query: 708 LTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETEL 766
           LTL+LG+LGTYVLNKQTPNRQIW+SSP+SGPSRFDWD+++ AWIYRR +A L  LLE EL
Sbjct: 129 LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEEL 180

[Close]

BLAST of ClCG02G011330 vs. ExPASy Swiss-Prot
Match: Q54C45 (Frataxin, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=fxn PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-19
Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 666 FHNLADSTIQGLQEKLEEYGDNLQIDGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWL 725
           FH++ D   +   ++LE   +    +GF+V+  + VLT+ +GN GTYV+NKQTPNRQIW 
Sbjct: 88  FHDIVDEEFELFVDRLEILSEANTCEGFEVEGNDGVLTIIVGNKGTYVINKQTPNRQIWW 147

Query: 726 SSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETELAQLC 766
           SSPLSGP RFD+D   + W+  R+   L  LL +E+  LC
Sbjct: 148 SSPLSGPKRFDYDSVEKRWVDNRDGTPLRQLLNSEINTLC 187

[Close]

BLAST of ClCG02G011330 vs. ExPASy Swiss-Prot
Match: O35943 (Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-19
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 650 RGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDN-LQIDGFDVDYGNEVLTLRL-G 709
           R    +D  S + E  +  LA+ T+  L E  E+  D    ++ +DV +G+ VLT++L G
Sbjct: 76  RNLGTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTIKLGG 135

Query: 710 NLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETELAQ 764
           +LGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL  EL +
Sbjct: 136 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLARELTK 189

[Close]

BLAST of ClCG02G011330 vs. ExPASy Swiss-Prot
Match: Q05B87 (Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.5e-19
Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 661 MQEGEFHNLADSTIQGLQEKLEEYGDN-LQIDGFDVDYGNEVLTLRL-GNLGTYVLNKQT 720
           + +  +  LA+ T+  L E  E+  D     + +DV +G+ VLT++L G+LGTYV+NKQT
Sbjct: 91  LDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQT 150

Query: 721 PNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETELAQ 764
           PN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL TEL Q
Sbjct: 151 PNKQIWLSSPSSGPKRYDW--TGRNWVYSHDGVSLHELLATELTQ 193

[Close]

BLAST of ClCG02G011330 vs. ExPASy Swiss-Prot
Match: Q16595 (Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 2.1e-18
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 0


Query: 650 RGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDN-LQIDGFDVDYGNEVLTLRL-G 709
           R    + +   + E  +  LA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 79  RKSGTLGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 138

Query: 710 NLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETELAQ 764
           +LGTYV+NKQTPN+QIWLSSP SGP R+DW    + W+Y  +  +L  LL  EL +
Sbjct: 139 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLAAELTK 192

[Close]

BLAST of ClCG02G011330 vs. ExPASy TrEMBL
Match: A0A5A7TYD2 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001190 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.2e-120
Identity = 276/563 (49.02%), Postives = 306/563 (54.35%), Query Frame = 0


Query: 161 FVVFGPDDVKVYHNLKVNGMPLMEGKMMDSIYFMSIEVDYVNKTWKNETTNLWHARLGHV 220
           FVVFGPDDVKVYHNLKV+G PLMEG+ MDSIY MS E  YVNKT KN+T +LWHARLGHV
Sbjct: 230 FVVFGPDDVKVYHNLKVSGTPLMEGRRMDSIYVMSAETAYVNKTRKNDTADLWHARLGHV 289

Query: 221 SYSKLKTMINKSMLKRLPQLDIKEDMVCVGCQYGKAYQLPFKESKFKAKQPLELVHSDVF 280
           S SKLKT+INK+MLK LPQLDI+EDMVC GCQYGKA+QLPFK+SKF+AKQPLELVHSDVF
Sbjct: 290 SCSKLKTIINKTMLKGLPQLDIREDMVCAGCQYGKAHQLPFKDSKFRAKQPLELVHSDVF 349

Query: 281 GLV--------------------------------------------------------- 340
             V                                                         
Sbjct: 350 DPVKQSSVSGMRYMVTFIDDFFRLPQQRLEFKSPYEKLLNIKPTVGHFRVFGCVCYVFVP 409

Query: 341 --------------------------------NGRCYTSRNVIFNETSSWCAPELEKAPI 400
                                           +GRCYTSRNVIF+E SSW  PE EK+  
Sbjct: 410 DHLRSKFNKKAIRCIFVGYDNQRKGWRCVDPTSGRCYTSRNVIFDEASSWWIPESEKSTK 469

Query: 401 DEKSFKEGSKEEISQVQHALIEGEEENDEDDEEQSMTQSPWQSEVHNQETQLRRSTRLRK 460
           +EKSFKEGSKEEISQVQ A  E EE NDED+EEQ  TQSPWQS ++NQE QLRRSTR+RK
Sbjct: 470 NEKSFKEGSKEEISQVQQAPTEAEEGNDEDEEEQVRTQSPWQSGIYNQEPQLRRSTRIRK 529

Query: 461 PNSRHVNATLATFEELETYEEVSQNIQWRKAMEEERDALRRNRMWDLMPKPKDVKPISCK 515
           PNSR+VNA LATFEE  TYEEVSQ+IQWRKAMEEE D L++N  WDL+PKPKDVKPISCK
Sbjct: 530 PNSRYVNAALATFEEPATYEEVSQSIQWRKAMEEEVDTLKKNHTWDLVPKPKDVKPISCK 589

[Close]

BLAST of ClCG02G011330 vs. ExPASy TrEMBL
Match: A0A0A0KAC6 (Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 9.4e-86
Identity = 165/195 (84.62%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 571 NLNLKPVDVTMATKLLSLRKLSRILKLPSSSSSSFRKCSYLLEASRPLLDLSNDVHQFHP 630
           +LN KPVDV MA KLL LRKLSRILKLPS SS SFRK  +LLEAS PL+ + N+VHQFHP
Sbjct: 23  SLNFKPVDVAMA-KLLPLRKLSRILKLPSYSSCSFRKFPHLLEASSPLIHIFNNVHQFHP 82

Query: 631 PYVTRRFCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQI 690
           P   R FCS PL  VGDDSRGPA IDYSSLMQEGEFH LAD  IQGLQEKLEEYGDNLQI
Sbjct: 83  PSFLRSFCSRPLDIVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQI 142

Query: 691 DGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNK 750
           DGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQ WIYRRNK
Sbjct: 143 DGFDVDYGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNK 202

Query: 751 ANLLNLLETELAQLC 766
           ANLL+LLETEL QLC
Sbjct: 203 ANLLSLLETELTQLC 216

[Close]

BLAST of ClCG02G011330 vs. ExPASy TrEMBL
Match: A0A1S3BJ48 (Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.6e-85
Identity = 161/185 (87.03%), Postives = 168/185 (90.81%), Query Frame = 0


Query: 581 MATKLLSLRKLSRILKLPSSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYVTRRFCSP 640
           MATKLL L KLSRILKLPSSSS SFRKC YLLEAS PL+ +SN+VHQF PP  ++ FCS 
Sbjct: 1   MATKLLPLHKLSRILKLPSSSSCSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQSFCSR 60

Query: 641 PLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVDYGNE 700
           PL  VGDDSRGPA IDYSSLMQEGEFH LAD TIQGLQEKLEEYGDNLQIDGFDVDYGNE
Sbjct: 61  PLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVDYGNE 120

Query: 701 VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETE 760
           VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNS+AWIYRRNKANLL+LLETE
Sbjct: 121 VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSLLETE 180

Query: 761 LAQLC 766
           L QLC
Sbjct: 181 LMQLC 185

[Close]

BLAST of ClCG02G011330 vs. ExPASy TrEMBL
Match: A0A6J1I2E7 (Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 8.0e-85
Identity = 163/189 (86.24%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 581 MATKLLSLRKLSRILKLP----SSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYVTRR 640
           MATKLL LRKLSRILK+P    SSSSSSFRK SYLLE +RPLLDLS++VHQFHPP  +R 
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 641 FCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVD 700
           FCS PL FVGDDSRGPA IDYSSLMQEGEFH L DSTI GLQEKLEEYGD+LQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 701 YGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNL 760
           YGNEVLTLRLG+LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQ+SQAWIYRRNKANLL L
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 761 LETELAQLC 766
           LETELAQLC
Sbjct: 181 LETELAQLC 189

[Close]

BLAST of ClCG02G011330 vs. ExPASy TrEMBL
Match: A0A6J1G6C8 (Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.9e-84
Identity = 162/189 (85.71%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 581 MATKLLSLRKLSRILKLP----SSSSSSFRKCSYLLEASRPLLDLSNDVHQFHPPYVTRR 640
           MATKLL LRKLSRILK+P    SSSSSSFRK SYLLE++RPLLDLS++VHQFHPP  +R 
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 641 FCSPPLHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVD 700
           FCS PL FVGDDSRGPA IDYSSLMQEGEFH LADSTI GLQEKLEEYGD+LQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 701 YGNEVLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNL 760
           YGNEVLTLRLG LGTYVLNKQTPNRQIWLSSP+SGPSRFDWDQ+SQAWIYRR+KANLL L
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 761 LETELAQLC 766
           LETEL QLC
Sbjct: 181 LETELTQLC 189

[Close]

BLAST of ClCG02G011330 vs. TAIR 10
Match: AT4G03240.1 (frataxin homolog )

HSP 1 Score: 193.4 bits (490), Expect = 6.9e-49
Identity = 104/184 (56.52%), Postives = 129/184 (70.11%), Query Frame = 0


Query: 588 LRKLSRILKLPSS--SSSSFRKCSYLLEASRPLLD----LSNDVHQFHPPYVTRRFCSPP 647
           LRKL R LKL  +   S+  R  S L++ S   LD    + + +   H    TR F    
Sbjct: 9   LRKLPRFLKLSPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIR--HDSLTTRSF---- 68

Query: 648 LHFVGDDSRGPAAIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDNLQIDGFDVDYGNEV 707
                  S+GPA++DYSS++QE EFH LA+ TI  L EK+E+YGDN+QIDGFD+DYGNEV
Sbjct: 69  ------SSQGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEV 128

Query: 708 LTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQAWIYRRNKANLLNLLETEL 766
           LTL+LG+LGTYVLNKQTPNRQIW+SSP+SGPSRFDWD+++ AWIYRR +A L  LLE EL
Sbjct: 129 LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEEL 180

[Close]

BLAST of ClCG02G011330 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 61.6 bits (148), Expect = 3.2e-09
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0


Query: 182 LMEGKMMDSIYFM--SIEVDYVN--KTWKNETTNLWHARLGHVSYSKLKTMINKSMLKRL 241
           +++G   DS+Y +  S+E    N  +T K+E T LWH+RL H+S   ++ ++ K  L   
Sbjct: 38  ILKGNRHDSLYILQGSVETGESNLAETAKDE-TRLWHSRLAHMSQRGMELLVKKGFLDSS 97

Query: 242 PQLDIKEDMVCVGCQYGKAYQLPFKESKFKAKQPLELVHSDVFG 282
               +K    C  C YGK +++ F   +   K PL+ VHSD++G
Sbjct: 98  KVSSLK---FCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of ClCG02G011330 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 56.6 bits (135), Expect = 1.0e-07
Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 381 LATFEELETYEEVSQNIQWRKAMEEERDALRRNRMWDLMPKPKDVKPISCKWVYKIKINS 440
           +A  +E  TY E  + + W  AM++E  A+     W++   P + KPI CKWVYKIK NS
Sbjct: 80  IAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS 139

Query: 441 SG 443
            G
Sbjct: 140 DG 141

[Close]

BLAST of ClCG02G011330 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-06
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 399 WRKAMEEERDALRRNRMWDLMPKPKDVKPISCKWVYKIKINSSG 443
           W +AM+EE DAL RN+ W L+P P +   + CKWV+K K++S G
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83

The following BLAST results are available for this feature:

BLAST of ClCG02G011330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046986.1	2.4e-120	49.02	Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, cata...	[more]
KAG6604827.1	1.1e-85	85.94	Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004139965.2	1.9e-85	84.62	frataxin, mitochondrial [Cucumis sativus] >KGN46675.1 hypothetical protein Csa_0...	[more]
XP_008448200.2	7.4e-85	87.03	PREDICTED: frataxin, mitochondrial [Cucumis melo]	[more]
XP_022971111.1	1.6e-84	86.24	frataxin, mitochondrial [Cucurbita maxima]	[more]

BLAST of ClCG02G011330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR07	9.8e-48	56.52	Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2	[more]
Q54C45	1.5e-19	46.00	Frataxin, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=fxn PE=3 SV=1	[more]
O35943	1.9e-19	43.10	Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1	[more]
Q05B87	9.5e-19	45.71	Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1	[more]
Q16595	2.1e-18	41.38	Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2	[more]

BLAST of ClCG02G011330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TYD2	1.2e-120	49.02	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KAC6	9.4e-86	84.62	Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1	[more]
A0A1S3BJ48	3.6e-85	87.03	Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1	[more]
A0A6J1I2E7	8.0e-85	86.24	Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1	[more]
A0A6J1G6C8	3.9e-84	85.71	Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1	[more]

BLAST of ClCG02G011330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03240.1	6.9e-49	56.52	frataxin homolog	[more]
ATMG00300.1	3.2e-09	33.65	Gag-Pol-related retrotransposon family protein	[more]
AT4G23160.1	1.0e-07	41.94	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.5e-06	50.00	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 487..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..372
IPR002908	Frataxin/CyaY	PRINTS	PR00904	FRATAXIN	coord: 699..714 score: 37.5 coord: 661..679 score: 31.58 coord: 714..729 score: 81.25
IPR002908	Frataxin/CyaY	SMART	SM01219	Frataxin_Cyay_2	coord: 661..769 e-value: 1.9E-43 score: 160.3
IPR002908	Frataxin/CyaY	PFAM	PF01491	Frataxin_Cyay	coord: 661..765 e-value: 2.2E-35 score: 121.0
IPR002908	Frataxin/CyaY	TIGRFAM	TIGR03421	TIGR03421	coord: 663..763 e-value: 1.0E-21 score: 74.8
IPR002908	Frataxin/CyaY	PANTHER	PTHR16821	FRATAXIN	coord: 604..766
IPR002908	Frataxin/CyaY	PROSITE	PS50810	FRATAXIN_2	coord: 661..771 score: 27.922663
IPR017789	Frataxin	TIGRFAM	TIGR03422	TIGR03422	coord: 665..762 e-value: 2.2E-34 score: 115.7
IPR036524	Frataxin/CyaY superfamily	GENE3D	3.30.920.10	Frataxin/CyaY	coord: 654..768 e-value: 1.3E-38 score: 133.7
IPR036524	Frataxin/CyaY superfamily	SUPERFAMILY	55387	Frataxin/Nqo15-like	coord: 652..764
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 445..519 e-value: 7.8E-10 score: 38.8
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 206..256 e-value: 4.7E-14 score: 52.0
IPR020895	Frataxin conserved site	PROSITE	PS01344	FRATAXIN_1	coord: 713..727

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G011330.2	ClCG02G011330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006811	ion transport
biological_process	GO:1903329	regulation of iron-sulfur cluster assembly
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0004322	ferroxidase activity