ClCG02G010610 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G010610
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ulp1-like peptidase
Location	CG_Chr02: 21065313 .. 21066092 (-)
RNA-Seq Expression	ClCG02G010610
Synteny	ClCG02G010610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTCGTGGCTACTAAATCAAGCAAAACTGCCATTCCACGAATTCTGAGATGGACCTGTTCCCAGCCATCATACAAATCGTTGGAGAGGAATGTCTTCCAACCCAAAGAGGTAACTCATCTCCTATCAAATCTAAGCGATTGTTTAGATAACCTAAACGATCGTTGATATACGTCTACACGATCGTAGATATATATCAACGATCGTGTAGATTAGCTAAACGATCGATGAGTATAAGTATGCGATCGCTTAGTATAATATAAGCGATCGTTTAGCTTATCTATACGATCGTTTACAGTATTTTACTAACCTTTTGATTGTTCATTTGTTGTTTGCATTACAGACAATCATCCGAGTGAGACTTGTGCCCTCGCCAAATGAACTGAGATACAAGGAGGATAGAGCCAGGGGGGTTGAGTTGACGCCGTACGTCACCCCTGCGTCAAGAGATCAGCCGTTGGCTGACATGGATGCAGACCAACCCGAGACCTCACACGGATTCCTCGAGCAACCCGAAGTTCAAGTCAGCAAACTCTTCGTGAACTTCTTCACACGGTATCCAAAGTTCTTCTTTAAAGCGAGTATTGATAGTTTAACTGACAGGTCATATTTGGAGAAGAAAATTTGACCTTCCCTTACATGGAAGAAGAAGTTGGTGATACTCGTAGAACTCAATGGAATAATGAAAGAATGTGTGAGAGTGACTGTCCATTAGTACCCTTGCATTCAATTTTGTTGGTATAATGGTAGTTGACATTGAATGATTCTGGAAAATACTGG

mRNA sequence

AAGTTCGTGGCTACTAAATCAAGCAAAACTGCCATTCCACGAATTCTGAGATGGACCTGTTCCCAGCCATCATACAAATCGTTGGAGAGGAATGTCTTCCAACCCAAAGAGACAATCATCCGAGTGAGACTTGTGCCCTCGCCAAATGAACTGAGATACAAGGAGGATAGAGCCAGGGGGGTTGAGTTGACGCCGTACGTCACCCCTGCGTCAAGAGATCAGCCGTTGGCTGACATGGATGCAGACCAACCCGAGACCTCACACGGATTCCTCGAGCAACCCGAAGTTCAAGTCATATTTGGAGAAGAAAATTTGACCTTCCCTTACATGGAAGAAGAAGTTGGTGATACTCGTAGAACTCAATGGAATAATGAAAGAATGTGTGAGAGTGACTGTCCATTATTGACATTGAATGATTCTGGAAAATACTGG

Coding sequence (CDS)

AAGTTCGTGGCTACTAAATCAAGCAAAACTGCCATTCCACGAATTCTGAGATGGACCTGTTCCCAGCCATCATACAAATCGTTGGAGAGGAATGTCTTCCAACCCAAAGAGACAATCATCCGAGTGAGACTTGTGCCCTCGCCAAATGAACTGAGATACAAGGAGGATAGAGCCAGGGGGGTTGAGTTGACGCCGTACGTCACCCCTGCGTCAAGAGATCAGCCGTTGGCTGACATGGATGCAGACCAACCCGAGACCTCACACGGATTCCTCGAGCAACCCGAAGTTCAAGTCATATTTGGAGAAGAAAATTTGACCTTCCCTTACATGGAAGAAGAAGTTGGTGATACTCGTAGAACTCAATGGAATAATGAAAGAATGTGTGAGAGTGACTGTCCATTATTGACATTGAATGATTCTGGAAAATACTGG

Protein sequence

KFVATKSSKTAIPRILRWTCSQPSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRARGVELTPYVTPASRDQPLADMDADQPETSHGFLEQPEVQVIFGEENLTFPYMEEEVGDTRRTQWNNERMCESDCPLLTLNDSGKYW

Homology

[Close]

BLAST of ClCG02G010610 vs. NCBI nr
Match: XP_038876799.1 (uncharacterized protein LOC120069187 [Benincasa hispida] >XP_038876800.1 uncharacterized protein LOC120069187 [Benincasa hispida])

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-15
Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 1   KFVATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRAR 60
           KF++TK SK AI RILRWTCS+ PSYKSL + VFQPK+TI+  RLVPS  ELRYKEDR +
Sbjct: 87  KFISTKVSKVAILRILRWTCSRVPSYKSLSKKVFQPKKTIVVSRLVPSTKELRYKEDRLK 146

Query: 61  GVELTPYV 68
           G+ + P V
Sbjct: 147 GLNMVPVV 154

[Close]

BLAST of ClCG02G010610 vs. NCBI nr
Match: XP_038895573.1 (uncharacterized protein LOC120083780 [Benincasa hispida])

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 36/65 (55.38%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 1   KFVATKSSKTAIPRILRWTCS-QPSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRAR 60
           KF+ATK SK AIPRIL+WTCS  PS+  L+R+VFQPK TI+ ++L+   +E+RYKED+  
Sbjct: 47  KFIATKVSKNAIPRILKWTCSVAPSWNLLQRDVFQPKNTIVMLKLILMEDEIRYKEDQLL 106

Query: 61  GVELT 65
            +++T
Sbjct: 107 RLDVT 111

[Close]

BLAST of ClCG02G010610 vs. NCBI nr
Match: XP_038904532.1 (uncharacterized protein LOC120090911 [Benincasa hispida])

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-09
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 1   KFVATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKED 57
           KF+ATK SK  IPRILRWTCS+  SYKSL   VF  K+TI+  +LVPS  ELRYK++
Sbjct: 194 KFIATKISKDEIPRILRWTCSRASSYKSLSNKVFHSKKTIVVSKLVPSTEELRYKDN 250

[Close]

BLAST of ClCG02G010610 vs. NCBI nr
Match: KAA0054726.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-06
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1   KFVATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRAR 60
           ++ ATK+SK +IPRILRW C+Q PSYK L++N+F  K T+++ +L  S  E  + E R R
Sbjct: 88  EYPATKNSKGSIPRILRWNCTQTPSYKMLQKNIFDNKNTVVQAKLKLSTQEKAFIESRIR 147

[Close]

BLAST of ClCG02G010610 vs. NCBI nr
Match: KAA0035802.1 (hypothetical protein E6C27_scaffold403G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-06
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 3   VATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRARGV 62
           +ATK+SK +IPRILRW C+Q PSYK L+ N+F  K T+++ +L  S  E  + E R RG 
Sbjct: 60  LATKNSKGSIPRILRWNCTQAPSYKMLQNNIFDNKNTVVQTKLKLSTQEKAFMESRIRGD 119

Query: 63  ELTPYVTPASRDQPLADMDADQPETSH 89
           +          D+ + D+D     T H
Sbjct: 120 D----NMKMEDDESMLDIDNKDNTTPH 142

[Close]

BLAST of ClCG02G010610 vs. ExPASy TrEMBL
Match: A0A5A7UKC2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G005550 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.2e-07
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 1   KFVATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRAR 60
           ++ ATK+SK +IPRILRW C+Q PSYK L++N+F  K T+++ +L  S  E  + E R R
Sbjct: 88  EYPATKNSKGSIPRILRWNCTQTPSYKMLQKNIFDNKNTVVQAKLKLSTQEKAFIESRIR 147

[Close]

BLAST of ClCG02G010610 vs. ExPASy TrEMBL
Match: A0A5D3DXA5 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003180 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 8.1e-07
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 3   VATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRARG 61
           +ATK+SK +IPRILRW C   PSYK L++N+F  K T+++ +L PS  E  + E R +G
Sbjct: 79  LATKNSKGSIPRILRWNCPHVPSYKMLQKNIFDNKNTVVQAKLKPSTQEKAFMESRIQG 137

[Close]

BLAST of ClCG02G010610 vs. ExPASy TrEMBL
Match: A0A5A7SX17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00900 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 8.1e-07
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 3   VATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRARGV 62
           +ATK+SK +IPRILRW C+Q PSYK L+ N+F  K T+++ +L  S  E  + E R RG 
Sbjct: 60  LATKNSKGSIPRILRWNCTQAPSYKMLQNNIFDNKNTVVQTKLKLSTQEKAFMESRIRGD 119

Query: 63  ELTPYVTPASRDQPLADMDADQPETSH 89
           +          D+ + D+D     T H
Sbjct: 120 D----NMKMEDDESMLDIDNKDNTTPH 142

[Close]

BLAST of ClCG02G010610 vs. ExPASy TrEMBL
Match: A0A5A7U2Q4 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001660 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 1   KFVATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRAR 60
           K +A K+SK +IPRILRW C+Q PSYK L++N+F  K T+++ +L  S  E  + E R R
Sbjct: 67  KHLAIKNSKGSIPRILRWNCTQAPSYKILQKNIFDNKNTVVKPKLELSTQEKAFMESRIR 126

[Close]

BLAST of ClCG02G010610 vs. ExPASy TrEMBL
Match: A0A5A7UM87 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00590 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-06
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 3   VATKSSKTAIPRILRWTCSQ-PSYKSLERNVFQPKETIIRVRLVPSPNELRYKEDRARG 61
           + TK+SK +IPRILRW C+Q PSYK L++N+F  K TI++ +L  S  E  + E R RG
Sbjct: 138 LVTKNSKGSIPRILRWNCTQAPSYKMLQKNIFDNKNTIVKPKLKLSTQEKAFMESRIRG 196

The following BLAST results are available for this feature:

BLAST of ClCG02G010610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876799.1	5.7e-15	66.18	uncharacterized protein LOC120069187 [Benincasa hispida] >XP_038876800.1 unchara...	[more]
XP_038895573.1	1.5e-10	55.38	uncharacterized protein LOC120083780 [Benincasa hispida]	[more]
XP_038904532.1	8.0e-09	63.16	uncharacterized protein LOC120090911 [Benincasa hispida]	[more]
KAA0054726.1	1.3e-06	49.18	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0035802.1	1.7e-06	40.23	hypothetical protein E6C27_scaffold403G00900 [Cucumis melo var. makuwa]	[more]

BLAST of ClCG02G010610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G010610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKC2	6.2e-07	49.18	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G0...	[more]
A0A5D3DXA5	8.1e-07	49.15	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G...	[more]
A0A5A7SX17	8.1e-07	40.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U2Q4	1.4e-06	49.18	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G0...	[more]
A0A5A7UM87	1.8e-06	50.85	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G...	[more]

BLAST of ClCG02G010610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G010610.1	ClCG02G010610.1	mRNA