ClCG02G009120 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G009120
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RPM1-interacting protein 4-like
Location	CG_Chr02: 12697563 .. 12698928 (-)
RNA-Seq Expression	ClCG02G009120
Synteny	ClCG02G009120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAAGAAACTTGGTAAAATCTCATGTATGGTTGATTCTATGGAGTGCGTTGCATTAAGGTTGGTGAGATTTCTCTATGAATGTTAAATCTAACTCCGCTTACTGAAGGCAGCTTTCATTTTCTCCCCTGTTTTTACTATTCTCTGCATAAGTTTTTAGAGATGTTTCTGATATTCGATTGGGTAGTTCTGGATTGTTTCGAGATTATCTTAACTTCTTCTTTTTCTGTTGGTATTTTTTGAGCATTAACCTCTTTTCATTTAATGAAAAGTTTTGTTTCGGGTTAAAAAAAGAAAACAAAAAAACTATGGTCTTACATGGGTAAGGTTATAGAGATTTGACCCAAGAAGAAGGGAGAAGTGATCAGAGAGTCTCCACCTTCATATCTTTGTTACTTATTTTACTGTTATTGCTCAGACTTTTGCTTCCCTTGTGCCCCAATCTTTGAACACCTAACTTAATGAGCTACAACTAAGTGTACGTTTATACTATATTGCCATGAAATGACTGCCATCCTTGAGTTTATTGATTCTGCAGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTGTAAGTTCTCTGCAGCCAAATACTTCGAATTTCAACTAGTTTTTGAGACTACTCGGTATCAGAAGCTTTGCTTGTTAGACTATTGGCAAATGTGTCTTTTCTAGATACCTCACTCATGAGCTTCTAACTCCACACTCATCATATTCTTGCAGTCATTGGATGAAGGCACATTGTGAGATCAATTTAAATGATCAAATTCTCTTTGTTTGGTGCCTAAACCTTTTTGCATTGTTGTAAATATACCATGTTGTTTAAACTATTTCCATTCATATGTTACAAGTAGTTAAACACTGCTATTTTCTCATGGTTTTGAAAGTTGGAATTTGCAGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCGGTTCGATAAATGGGGTTCAGCAGAAATGTATAATCTGCAAATTCTCAACAACACGAGTGAAGCTGTATTTAGAACATGTGATGGATATTGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTTTGGTTGGGGATGAAGATGATTAATCATCATTGTCTTGTTATGTTGTTCCTTCTGCATAAATGGCAATTGTTGGAGATTGTTGTTCATCATCATCCCTCCTCCCCCTCTCCTCTAGTTGTGAAATGA

mRNA sequence

ATGACCAAGAAACTTGGTAAAATCTCATGTATGGTTGATTCTATGGAGTGCGTTGCATTAAGGTTGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTTTGGAATTTGCAGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCGGTTCGATAAATGGGGTTCAGCAGAAATGTATAATCTGCAAATTCTCAACAACACGAGTGAAGCTGTATTTAGAACATGTGATGGATATTGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTTTGGTTGGGGATGAAGATGATTAATCATCATTGTCTTGTTATGTTGTTCCTTCTGCATAAATGGCAATTGTTGGAGATTGTTGTTCATCATCATCCCTCCTCCCCCTCTCCTCTAGTTGTGAAATGA

Coding sequence (CDS)

ATGACCAAGAAACTTGGTAAAATCTCATGTATGGTTGATTCTATGGAGTGCGTTGCATTAAGGTTGGAAAAAGGCAGTAGCAGTCCATTACCAAAGTTCGGCGAATGGGATGTCAATGACCCAGCATCCGCCGAGGGATTCACGGTAATCTTTAATAAAGCCAGGAATGAGAAAAAGACTGGTGGCATGCCTGACTCTCCAGCAAAGGATGATCCCACATACAAGAATGGTTCTGTTCTTGGAAAGTCTCAACCTTTGGAATTTGCAGAAAAAATGGTTTTGCTGCTTGCAAGCTGCAGAATCGTGAAGCTTTCTCGGTTCGATAAATGGGGTTCAGCAGAAATGTATAATCTGCAAATTCTCAACAACACGAGTGAAGCTGTATTTAGAACATGTGATGGATATTGCTGGACTCCATTTGTTAGAACTTTTGTCAATAATTTGGGGGTTTGGTTGGGGATGAAGATGATTAATCATCATTGTCTTGTTATGTTGTTCCTTCTGCATAAATGGCAATTGTTGGAGATTGTTGTTCATCATCATCCCTCCTCCCCCTCTCCTCTAGTTGTGAAATGA

Protein sequence

MTKKLGKISCMVDSMECVALRLEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGKSQPLEFAEKMVLLLASCRIVKLSRFDKWGSAEMYNLQILNNTSEAVFRTCDGYCWTPFVRTFVNNLGVWLGMKMINHHCLVMLFLLHKWQLLEIVVHHHPSSPSPLVVK

Homology

[Close]

BLAST of ClCG02G009120 vs. NCBI nr
Match: XP_038902743.1 (protein NOI4 [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 7.8e-28
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 62

Query: 83 SQP 86
          SQP
Sbjct: 63 SQP 65

[Close]

BLAST of ClCG02G009120 vs. NCBI nr
Match: KAG7010787.1 (hypothetical protein SDJN02_27583, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-27
Identity = 70/102 (68.63%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 10  CMVDSMECVALRL----EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPD 69
           C+  ++    +RL    EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPD
Sbjct: 83  CLAIALALHIMRLGGCKEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPD 142

Query: 70  SPAKDDPTYKNGSVLGKSQPLEFAEKMVLLLASCRIVKLSRF 108
           SPAKDDPTYKNGSVLGK QP+   +  V  L S R+V  + F
Sbjct: 143 SPAKDDPTYKNGSVLGKPQPVSSLQPNV--LESLRLVLKNGF 182

[Close]

BLAST of ClCG02G009120 vs. NCBI nr
Match: KAE8646808.1 (hypothetical protein Csa_005404 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 8.6e-27
Identity = 67/92 (72.83%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 23  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
           EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKD+  +KNGSVLGK
Sbjct: 3   EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDETAFKNGSVLGK 62

Query: 83  SQPLEFAEKMV-LLLASCRIV---KLSRFDKW 111
           SQP+    +M+ + L S  I    KL   D W
Sbjct: 63  SQPVSSCSQMLRIYLISFEIAWNWKLCLLDYW 94

[Close]

BLAST of ClCG02G009120 vs. NCBI nr
Match: XP_022943908.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022985731.1 RPM1-interacting protein 4-like [Cucurbita maxima] >XP_023512852.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKDDPTYKNGSVLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVLGK 62

Query: 83 SQP 86
           QP
Sbjct: 63 PQP 65

[Close]

BLAST of ClCG02G009120 vs. NCBI nr
Match: KAG6570949.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-26
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKDDPTYKNGSVLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVLGK 62

Query: 83 SQP 86
           QP
Sbjct: 63 PQP 65

[Close]

BLAST of ClCG02G009120 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.5e-15
Identity = 41/59 (69.49%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 29 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTY--KNGSVLGKSQP 86
          PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QP
Sbjct: 7  PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQP 65

[Close]

BLAST of ClCG02G009120 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.5e-05
Identity = 21/47 (44.68%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 30  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKN 77
           +PKFG+WD N+P+SA+G+T IFNK R E+ +G      ++  PT+++
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSR-TPTHQS 193

[Close]

BLAST of ClCG02G009120 vs. ExPASy TrEMBL
Match: A0A6J1J928 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111483698 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.5e-27
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKDDPTYKNGSVLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVLGK 62

Query: 83 SQP 86
           QP
Sbjct: 63 PQP 65

[Close]

BLAST of ClCG02G009120 vs. ExPASy TrEMBL
Match: A0A6J1FXH4 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448491 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.5e-27
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GGMPDSPAKDDPTYKNGSVLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKAGGMPDSPAKDDPTYKNGSVLGK 62

Query: 83 SQP 86
           QP
Sbjct: 63 PQP 65

[Close]

BLAST of ClCG02G009120 vs. ExPASy TrEMBL
Match: A0A6J1I4X6 (uncharacterized protein LOC111469905 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469905 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-26
Identity = 59/63 (93.65%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKDDP+YK+G+VLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK 62

Query: 83 SQP 86
          SQP
Sbjct: 63 SQP 65

[Close]

BLAST of ClCG02G009120 vs. ExPASy TrEMBL
Match: A0A6J1I7R1 (uncharacterized protein LOC111469905 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469905 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-26
Identity = 59/63 (93.65%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKDDP+YK+G+VLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK 62

Query: 83 SQP 86
          SQP
Sbjct: 63 SQP 65

[Close]

BLAST of ClCG02G009120 vs. ExPASy TrEMBL
Match: A0A6J1G736 (uncharacterized protein LOC111451376 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451376 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-26
Identity = 59/63 (93.65%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 23 EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTYKNGSVLGK 82
          EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKDDP+YK+G+VLGK
Sbjct: 3  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGAVLGK 62

Query: 83 SQP 86
          SQP
Sbjct: 63 SQP 65

[Close]

BLAST of ClCG02G009120 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 0


Query: 29 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTY-KNGSVLGK 83
          PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y KNG VL K
Sbjct: 7  PLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLEK 61

[Close]

BLAST of ClCG02G009120 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 29  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTY--KNGSVLGKSQPL 88
           PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QP+
Sbjct: 7   PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPV 66

Query: 89  EFAEKMVLLLA--SCRIVKLSRFD 109
              +KM LL A  SC ++  ++ D
Sbjct: 67  ---KKMALLHASSSCGLLTDTKMD 87

[Close]

BLAST of ClCG02G009120 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 29  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTY--KNGSVLGKSQPL 88
           PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QP+
Sbjct: 23  PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPV 82

Query: 89  EFAEKMVLLLA--SCRIVKLSRFD 109
              +KM LL A  SC ++  ++ D
Sbjct: 83  ---KKMALLHASSSCGLLTDTKMD 103

[Close]

BLAST of ClCG02G009120 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-16
Identity = 41/59 (69.49%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 29 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGMPDSPAKDDPTY--KNGSVLGKSQP 86
          PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    K QP
Sbjct: 23 PLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQP 81

[Close]

BLAST of ClCG02G009120 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-11
Identity = 33/55 (60.00%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 29 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG--------MPDSPAKDDPTYK 76
          PLPKFGEWDVNDPASAEGFTVIF KAR++KKT            ++ ++D+PT K
Sbjct: 14 PLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQDEPTKK 68

The following BLAST results are available for this feature:

BLAST of ClCG02G009120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902743.1	7.8e-28	100.00	protein NOI4 [Benincasa hispida]	[more]
KAG7010787.1	1.3e-27	68.63	hypothetical protein SDJN02_27583, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8646808.1	8.6e-27	72.83	hypothetical protein Csa_005404 [Cucumis sativus]	[more]
XP_022943908.1	1.1e-26	96.83	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_022985731.1 RPM1-intera...	[more]
KAG6570949.1	1.1e-26	96.83	Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of ClCG02G009120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	3.5e-15	69.49	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	2.5e-05	44.68	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of ClCG02G009120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J928	5.5e-27	96.83	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111483698 PE=4...	[more]
A0A6J1FXH4	5.5e-27	96.83	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111448491 PE...	[more]
A0A6J1I4X6	2.1e-26	93.65	uncharacterized protein LOC111469905 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I7R1	2.1e-26	93.65	uncharacterized protein LOC111469905 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G736	2.1e-26	93.65	uncharacterized protein LOC111451376 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of ClCG02G009120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04410.1	1.4e-19	81.82	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	1.3e-17	58.33	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	1.3e-17	58.33	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	2.5e-16	69.49	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G40645.1	1.9e-11	60.00	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 27..60 e-value: 4.8E-21 score: 73.8
None	No IPR available	PANTHER	PTHR33159:SF59	RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED	coord: 28..102
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 28..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G009120.2	ClCG02G009120.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane