Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGATCTAATTTTCTTCTTTGGCAAAATTTGGCATGGCCAATCCTCCGCAGCTATGGCCTTGAAGGTTATCTCACTGGGGATAAATCATGCCCTAGTAAATTTGTTACTCAAGAATTTGATGTTAGTGAAAGATCGAGTGCTGTTACCGCAACAACAGTGGAGCAACGACCTAATCCAGCATACCAGTCATGGGTTGCTGTTGATCAACTCGTTTTAGAATGGATGTATAACTCCATGTCTCCGGAGATCGCTACTCAGGTAATGGGTTTTCAGACTTCAAAAGAACTTTGGGAAGCTGTTCAACAACTGTTCGAAATTCAATCAAGAGTAGAAGTCGATTATATGTAGAGGTTATTTCAACAAACAAAAAAAGGTGCGTTGAAAATGGATGAATACTTAGCCACTATGAAAAGGTACTCTGATAGGTTGCTAGTCTTTGCCGGCAGTCCTGTTCTTGTGAGTGATCTTGTTTCGCAGGTTCTGTTTAGACTCAATGAGGAGTACAACCTTGTGGTTATTTCACTTCAAGGAAAGTATGGTGTATCCTGGATTGAAATGCAGCCTGATCTGTTTTCATATGAATGTCGTTTGGAGTATCAATTAACCATGAAAACTGGCTTAACTAATCTAAATATTCTTTTACTCCATTGTCTGCTAATATTGTACAAAAATCTGCTGAGAATTCCACAACACAATCTTTAGCCAACCAGAATCAGGGGAATCAAGGCTTCACACCAAAAGGCAATCAGAACAGAGGGAAAAGGGCCTTGGAACAACTCGTGCTCAAATCGCTTGACTTGTCAAACTTGCGGAAAACTTGGACATATGACCAACATTTGCTTCTTCCGCTACAACAAAGAGTTCAATAA
mRNA sequence
ATGGATAGATCTAATTTTCTTCTTTGGCAAAATTTGGCATGGCCAATCCTCCGCAGCTATGGCCTTGAAGGTTATCTCACTGGGGATAAATCATGCCCTAGTAAATTTGTTACTCAAGAATTTGATGTTAGTGAAAGATCGAGTGCTGTTACCGCAACAACAGTGGAGCAACGACCTAATCCAGCATACCAGTCATGGGTTGCTGTTGATCAACTCGTTTTAGAATGGATGTATAACTCCATGTCTCCGGAGATCGCTACTCAGGTTCTGTTTAGACTCAATGAGGAGTACAACCTTGTGGTTATTTCACTTCAAGGAAAGTATGGTGTATCCTGGATTGAAATGCAGCCTGATCTGTTTTCATATGAATGTCCCAACCAGAATCAGGGGAATCAAGGCTTCACACCAAAAGGCAATCAGAACAGAGGGAAAAGGGCCTTGGAACAACTCGTGCTCAAATCGCTTGACTTGTCAAACTTGCGGAAAACTTGGACATATGACCAACATTTGCTTCTTCCGCTACAACAAAGAGTTCAATAA
Coding sequence (CDS)
ATGGATAGATCTAATTTTCTTCTTTGGCAAAATTTGGCATGGCCAATCCTCCGCAGCTATGGCCTTGAAGGTTATCTCACTGGGGATAAATCATGCCCTAGTAAATTTGTTACTCAAGAATTTGATGTTAGTGAAAGATCGAGTGCTGTTACCGCAACAACAGTGGAGCAACGACCTAATCCAGCATACCAGTCATGGGTTGCTGTTGATCAACTCGTTTTAGAATGGATGTATAACTCCATGTCTCCGGAGATCGCTACTCAGGTTCTGTTTAGACTCAATGAGGAGTACAACCTTGTGGTTATTTCACTTCAAGGAAAGTATGGTGTATCCTGGATTGAAATGCAGCCTGATCTGTTTTCATATGAATGTCCCAACCAGAATCAGGGGAATCAAGGCTTCACACCAAAAGGCAATCAGAACAGAGGGAAAAGGGCCTTGGAACAACTCGTGCTCAAATCGCTTGACTTGTCAAACTTGCGGAAAACTTGGACATATGACCAACATTTGCTTCTTCCGCTACAACAAAGAGTTCAATAA
Protein sequence
MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFVTQEFDVSERSSAVTATTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVLFRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQGFTPKGNQNRGKRALEQLVLKSLDLSNLRKTWTYDQHLLLPLQQRVQ
Homology
BLAST of ClCG02G008950 vs. NCBI nr
Match:
XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])
HSP 1 Score: 99.0 bits (245), Expect = 4.4e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. NCBI nr
Match:
XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo])
HSP 1 Score: 99.0 bits (245), Expect = 4.4e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. NCBI nr
Match:
XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])
HSP 1 Score: 99.0 bits (245), Expect = 4.4e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. NCBI nr
Match:
XP_016902204.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo])
HSP 1 Score: 99.0 bits (245), Expect = 4.4e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 97.8 bits (242), Expect = 9.9e-17
Identity = 69/224 (30.80%), Postives = 92/224 (41.07%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFVTQEFDVSERSSAVTATTVEQRPN 60
MDR NFLLWQNLA PILRSY L YLTGDK CP + D T++ N
Sbjct: 39 MDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPT-DTPTNIEGSTSSQSSPTLN 98
Query: 61 PAYQSWVAVDQLVLEWMYNSMSPEIA---------------------------------- 120
P Y++W+ VD+L+L W+YNSM+ ++A
Sbjct: 99 PTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQV 158
Query: 121 --------------------------------------TQVLFRLNEEYNLVVISLQGKY 145
+QVL L+EEYN +V+++QGK
Sbjct: 159 FQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKV 218
BLAST of ClCG02G008950 vs. ExPASy TrEMBL
Match:
A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. ExPASy TrEMBL
Match:
A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. ExPASy TrEMBL
Match:
A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. ExPASy TrEMBL
Match:
A0A1S4E2K3 (uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFV----TQEFDVSERSSAVT----A 60
+DR N+LLW+ LA PIL+ Y LEG+LT + CPS FV + V+E + T +
Sbjct: 35 LDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFVLSASSSNTTVTEEGADATIGASS 94
Query: 61 TTVEQRPNPAYQSWVAVDQLVLEWMYNSMSPEIATQVL---------------------- 120
+ + NP ++ WV D L+L W+YNSM+P++A Q++
Sbjct: 95 SITPRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRA 154
Query: 121 -------------FRLNEEYNLVVISLQGKYGVSWIEMQPDLFSYECPNQNQGNQ 133
L+E YNLV++ +QGK +SW++MQ L +E ++Q Q
Sbjct: 155 EEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQ 209
BLAST of ClCG02G008950 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 4.8e-17
Identity = 69/224 (30.80%), Postives = 92/224 (41.07%), Query Frame = 0
Query: 1 MDRSNFLLWQNLAWPILRSYGLEGYLTGDKSCPSKFVTQEFDVSERSSAVTATTVEQRPN 60
MDR NFLLWQNLA PILRSY L YLTGDK CP + D T++ N
Sbjct: 39 MDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPT-DTPTNIEGSTSSQSSPTLN 98
Query: 61 PAYQSWVAVDQLVLEWMYNSMSPEIA---------------------------------- 120
P Y++W+ VD+L+L W+YNSM+ ++A
Sbjct: 99 PTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQV 158
Query: 121 --------------------------------------TQVLFRLNEEYNLVVISLQGKY 145
+QVL L+EEYN +V+++QGK
Sbjct: 159 FQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKV 218
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016902203.1 | 4.4e-17 | 32.57 | PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo] | [more] |
XP_016902205.1 | 4.4e-17 | 32.57 | PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo] | [more] |
XP_016902197.1 | 4.4e-17 | 32.57 | PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo] | [more] |
XP_016902204.1 | 4.4e-17 | 32.57 | PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo] | [more] |
XP_022151683.1 | 9.9e-17 | 30.80 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S4E1U9 | 2.2e-17 | 32.57 | uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4E1U6 | 2.2e-17 | 32.57 | uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4E1V2 | 2.2e-17 | 32.57 | uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4E2K3 | 2.2e-17 | 32.57 | uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1DCW4 | 4.8e-17 | 30.80 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
Match Name | E-value | Identity | Description | |