ClCG02G007080 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAGTCCGCGTTATTGTTCTTTAATGTTTATTCGTACTCTAAAAGTTATAGAGCTCTCGTCTGTGTTTAGCAACTAAGAAAAGATCAATCCGATCGTTTCAAGAAATCTCATAGAAAGAGAGAGAGGGAAAATATGAGTTACTACGCCCAGCCACCGCCCCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCTGAAAGCCATTACTCTTTCCTCTCTTACTTCCGCTACACTTTCTTGAAATTCTAGATCCAAATCCAATGGATCTTACTTTTTTTTTCCGCAAAGTTGATCTACCCTTTGTTTTCATCTCGCTTTCGCGCTTTGATTTGACCCATTTTTGGCTGCGATTCGTTGAATTTTGACGATTTTAGGTTATCCACCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGTTATCCTCCGCAGGGATATCCACCTCCGCCGGCGTATGGTGCTCCGTACGGTCATCCTCCACCTCAACATCAAAACCAAAATAAAGAAGTTGGATTCGTCGAAGGCTGGTAAGTCTCTGCTTCTCTTTCGTTTTACAACTCTTACTGGATGCGATTTAAAATTGAGTCAATGGGTCTTCGCGGCGGCGAAATACGGATATGGTTACAGATTAGGCCATTAATCGGTTCTTGTGCGGCGGCGATTTTAGTTTTCGAATTTTTGTTTTGATGTTGGGGAATGTGGAAACAGTCGAATCAGTAAGGGCTGACACAGGGTGGAAAGTTCTTTCCTCACATGAACAGAGCTGCAGTTTTATTTTTCTTCCTCTTCTTTTCTTTTTAAATTAAGTTTAAATATTATTTTGTGATTTTATATATATAATGTTATTTTGGTTCCTATAATTTCAAAAGTTTCATTTTTAGTCAATATAATTTAAACTTTATTTGAAAGTACATTTACAAAAATAATCAAAGTTGGAAGTATAAAAATAAAATAAACATTTTGAAATCACATAACCAAAATGAACCGTTTAAAAGGTATAAGAGCAAAAATAAACAAAACCAAAAAATGAAGGGACCAAAATAGTATTAAATTTCAAATTAAAATGTACTGCTCTTTTCTGGTCTTATTTTCTAATTTTCATTTTTAAGGTTATCATGAGAAATATAGGGAGGTCTCAATTTTAGAGAAATATGGATAAAGGTATTTATAACAACTAACATTAGATATAAATGGATATATTTTTTAAAAAATTAGGTAAAAATACTAGTTTGGTGTATTCAATTTTAGTCGTTCTACTTTCAATTGTCTAATTTTAGTTTCTATACTTTTGATAAATTTTAAATTTAGTCTCTCAATATTAATTTTTAACAAAGTTGATTAAATAAAAACAATAATTTTCATGCAAGAAGATACAATATATTGAATACATTTCCAAAATTTATTGTAAAAATGTTAATAGATAACAATTTTTTTAAAAAAAAATCAACAATAAACTAGTAGTGACAATTAAATTTAAGATTTATTTAAAGTACTCTAAAATTGATACAATTAATACAAGTGAAAGTATATGATTAAAATTGATCAAATTTTAAAGTATATAAATCAAAATGATATTTTAACTAAAAAGTTATACAAATAAAAAAATATATATTTAAATTAGGTAATAGATATTCTATGTTTATATATATATAAAATGGGAAGTAGATTCCCCATTTCAAATTGTAAATTCATGAAAACATGAAAATATTATTAAAAGTGTGGATAGAAATTAACGATGGAGATTAGAGGGGTAGAGAGGAACGTATATTAATTAATTTTTTTAATTTAAAGATGTATTTAAAAAAAATACATATTTAAATATCTTTTAGTCTTTTCTATTACCTGATTGAAATGGGCTTCAAGATAAGTGCATATATTATTTTATATATATTCAAAGTAAAAGTTTTGGATGTAATTGTTATTTCTAACCTAAAATAATTTTGAGGGAGGAAAACTAACTTTTTTTTAAATAATTTTTTTTTAATCTATTTTTCACTTTCGCACTCCATATAATGAAAATACCATTTTATCCCTCAATTAAGTACTTCCAATTCATCTTTACTTAATATAATTTTCATACTCAACTACATCTTTAAATTTTGAATTTCAGTTTTTTTAATTTGTTTGTCTCCATGTCTTTGTAAATTTGTTGTTATTTTTAAAGGAAAAAATTTTGATAAAAAAACTTACTATAAATTTTCTTTGTAAGAATCTTTACGGAAAATTTTATAGTAAGAGATTAATTTTGTGCAGTCAAAACTAAAATGACTATTTTAGGTTAGAAATAACAATTTTCCTATACTATAAATAGCTTTTTTTTTCATTTACTTAATTTCTTTCTTAAAGTTAATGAAAAATAATAAATAATAAAGCAATTACTTAGTCTTTTTTTTTTTGAGTTTCATTAAATTTTACCTTTTGACCAACTTTATATACATGACTTGTTCTATCTTCGAACACGAGTAAGTAGGAGAATATTAATTTTCTAGTTTTATATATATTTTTTTCTTTTATGTCTATTTCACAATGAAATTACATGGTTATATACACACATATATACTATAATTGAAATTATGAAAAATCATCTGAATTCGTTTGTAAATTTTGCAGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGATGATGGCGTACAGATTTTGAATTTGAATTTGAATTTCATCTCCATATATTTAATTTGTGAGTGTGTAATATTCATGTTTCTATTCTCATTATACCTACTCTATCTCTCTTCATACTTCTTGAACCCTTGCTTCCAATGGATATAGATTTTTAACTTTTATTTTTGTCTATTGGATTTTGGATCAC GAAAAAGTCCGCGTTATTGTTCTTTAATGTTTATTCGTACTCTAAAAGTTATAGAGCTCTCGTCTGTGTTTAGCAACTAAGAAAAGATCAATCCGATCGTTTCAAGAAATCTCATAGAAAGAGAGAGAGGGAAAATATGAGTTACTACGCCCAGCCACCGCCCCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCACCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGGATATCCACCTCCGCCGGCGTATGGTGCTCCTTGGATTCGTCGAAGGCTGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGATGATGGCGTACAGATTTTGAATTTGAATTTGAATTTCATCTCCATATATTTAATTTGTGAGTGTGTAATATTCATGTTTCTATTCTCATTATACCTACTCTATCTCTCTTCATACTTCTTGAACCCTTGCTTCCAATGGATATAGATTTTTAACTTTTATTTTTGTCTATTGGATTTTGGATCAC ATGAGTTACTACGCCCAGCCACCGCCCCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCACCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCGCCAGGATATCCACCGCAGGGCGGTTATCCACCTGCTGGGATATCCACCTCCGCCGGCGTATGGTGCTCCTTGGATTCGTCGAAGGCTGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGATGATGGCGTACAGATTTTGAATTTGAATTTGAATTTCATCTCCATATATTTAATTTGTGAGTGTGTAATATTCATGTTTCTATTCTCATTATACCTACTCTATCTCTCTTCATACTTCTTGAACCCTTGCTTCCAATGGATATAG MSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGISTSAGVWCSLDSSKAVWLLFVAALCWMFAFDDGVQILNLNLNFISIYLICECVIFMFLFSLYLLYLSSYFLNPCFQWI Homology
BLAST of ClCG02G007080 vs. NCBI nr
Match: XP_023553865.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-15 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of ClCG02G007080 vs. NCBI nr
Match: XP_022972438.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]) HSP 1 Score: 92.0 bits (227), Expect = 3.8e-15 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of ClCG02G007080 vs. NCBI nr
Match: XP_038888465.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]) HSP 1 Score: 91.3 bits (225), Expect = 6.4e-15 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of ClCG02G007080 vs. NCBI nr
Match: KAA0031373.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK06825.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]) HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of ClCG02G007080 vs. NCBI nr
Match: XP_008455047.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]) HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.5e-09 Identity = 37/49 (75.51%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06 Identity = 29/46 (63.04%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.4e-06 Identity = 32/47 (68.09%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.8e-04 Identity = 27/44 (61.36%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2) HSP 1 Score: 45.4 bits (106), Expect = 5.3e-04 Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy TrEMBL
Match: A0A6J1I9Y5 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111470998 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.8e-15 Identity = 44/45 (97.78%), Postives = 44/45 (97.78%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy TrEMBL
Match: A0A5A7SME1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001290 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy TrEMBL
Match: A0A0A0K2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy TrEMBL
Match: A0A1S3BZZ2 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103495315 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0
BLAST of ClCG02G007080 vs. ExPASy TrEMBL
Match: A0A6J1GJV9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111454944 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14 Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of ClCG02G007080 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10 Identity = 37/49 (75.51%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of ClCG02G007080 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06 Identity = 27/38 (71.05%), Postives = 28/38 (73.68%), Query Frame = 0
BLAST of ClCG02G007080 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein ) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05 Identity = 31/50 (62.00%), Postives = 32/50 (64.00%), Query Frame = 0
BLAST of ClCG02G007080 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05 Identity = 28/44 (63.64%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of ClCG02G007080 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 41.6 bits (96), Expect = 5.4e-04 Identity = 29/46 (63.04%), Postives = 30/46 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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