ClCG02G006840 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G006840
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	30S ribosomal protein S2, chloroplastic
Location	CG_Chr02: 7915551 .. 7917462 (-)
RNA-Seq Expression	ClCG02G006840
Synteny	ClCG02G006840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACGTATATTCATATTATAAATCTTACTAGAACTGTTCGTTTTTTTTTTTATCAGAAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATGTTAATAAAAAATGGCTTGGGGGATGTTAACAAATTGATCTACTATAGAAATGAGACTATTGGGATTAGTGCCTTAAATCTCGTGGGTCTCGTAGTTTGTATATTGTAAATGATAGTTTATTTATTTAATAAAATAAGAAGTATTTTATTTCACATTTATATCGCATTAACTCAATCCAATAAACCAAGATCCAAAGTTATTTAATGTAACTTGAATAGTATGTAGTTGACACACAAGTAGATTGTATTCAAGTAATAACTTAAAAGGTATGCAACATATGGATAAGGTTGGGTGTGTTATCCTAATAATATTGTGGATACAACCCACTTTGTAATTGTTACAAGAGTTACAATCGATTTGATCCAAATCCTTCATGTGGAGACATGTGAGTGGGGTATCATGTACAAAGAGTTTGTATAAGATCGGACTTTATAACACCGTTAATTGAAGAGACTAACATTTCATAGGATGATCATAGATAACTCAGTCTCAATCCTGAGTGAGTATGGACTCCTATCTATGAGGACAATCCTTTGATTTGTATAAGAGTGACTCGAGTTGCCGACTTAATATGCCTACCACTTTGAGAATTTATCTGAGTAGGGAGCTGAGAACATAACTATACAAGATGGAGTTGACTCTTTTCCGCATTCAGGGAAAGTAGATAAATTGCTCCATTAAGTACTAACCCCGTGTCTTGAACATGGAGCCCTCCCTCCCATTGGCTCGAGAGGGATTTTTTTATGGTAGGACCATAAACAGTTTGTTCATTAGAAGATCAATGAGACTTAAGGAGAAATAAGTAATTACATGGGTAAAACAGTAATTTTGACCCGGTTGTAATTATGAGCAATTTGTGAAGAATCGACTTATTGATGACTGGTTATATCCATGGACACAAAAATACATCTATAGTGCAAAAAGTGCAATTGTGAGTTTTTAGTGGAGTGACCCATAGTTAATGATCTACTACAGAAACGAGACTTCATAAGTTCAAGGACTTGAGAACAGAACAAAAGACGGGCCCCAGGTAGGTGCTTTGTTTGTGAGCTGGAAATTTAAAGATTAGTGATCCCACTGTTTTTAATGTTGGAGTGCTTAAAGGCATAGCATGTGTTGTCGGAATTTCTTTTCAAGAAAGAACTACGATACGAGTAATTCTATAAGGGGCAAGAATCATGAAATGCTCTTTTTTTTCCAGGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGAGTAATTCTATGAGCAAGAATAATGAAATGCTCTTTTTTTCGAGTGTGGGTCCTTATTGGCTCAGTTGCACAAATAACTGGTGTTTGGAAAAGATTACCTATTAGATTAGTGGATTCGATGTAACTCATGACCTCAGACTATCCTAAGGAGTCGGGTCTCCCAATCCAATAAAAGAAATATGGGCAAGACAAAAGAGAAGTATTAGCCCTTCTGGAAAGAGATTCAATAACACTGATCAAAGAGCTAGCAATGACTTTCTTCCCACCTGGAGTGATGGTTAGGCCACGGCCAAGAGAACCCTTCAGATACCGTAAGATGGGTTTTACAGCTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA

mRNA sequence

ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATAACTACGATACGAGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGACTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA

Coding sequence (CDS)

ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATAACTACGATACGAGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGACTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA

Protein sequence

MMEARVRLGHGTRKWNPRMTSYISAKPCDLVFDAASRGKQFLIVGTKNKVVDSVARAATRAQCHYNYDTRRVLVGSDAPITTAYWKRLPIRRLSVPLTLTIQSWMLSEDLRT

Homology

[Close]

BLAST of ClCG02G006840 vs. NCBI nr
Match: BBN69347.1 (hypothetical protein Prudu_897S000100 [Prunus dulcis])

HSP 1 Score: 112.1 bits (279), Expect = 3.2e-21
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK-PCDLVFDAASRGKQFLIVGTKNKVVDSVARAAT 60
          MMEA V  GHGTRKWNPRM  YISAK  CDLVFDAASRGKQFLIVGTKNK  DSVARAA 
Sbjct: 22 MMEAGVHFGHGTRKWNPRMAPYISAKQACDLVFDAASRGKQFLIVGTKNKAADSVARAAI 81

Query: 61 RAQCHY 66
          +A+CHY
Sbjct: 82 KARCHY 87

[Close]

BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_009752739.1 (ribosomal protein S2 [Cyclantheropsis parviflora] >QIT05389.1 ribosomal protein S2 [Cyclantheropsis parviflora])

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20
Identity = 56/83 (67.47%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM+ YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMSPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_009236269.1 (ribosomal protein S2 [Gynostemma pentaphyllum] >YP_009440146.1 ribosomal protein S2 [Gynostemma longipes] >YP_009440233.1 ribosomal protein S2 [Gynostemma burmanicum (nom. inval.)] >YP_009440320.1 ribosomal protein S2 [Gynostemma pubescens] >AMF84014.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ANI25174.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ART64997.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ATG86925.1 ribosomal protein S2 [Gynostemma longipes] >ATG87012.1 ribosomal protein S2 [Gynostemma burmanicum (nom. inval.)])

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20
Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_010119723.1 (ribosomal protein S2 [Hemsleya zhejiangensis] >QRC26965.1 ribosomal protein S2 [Hemsleya zhejiangensis])

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20
Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_010018023.1 (ribosomal protein S2 [Primula saxatilis] >QOJ47638.1 ribosomal protein S2 [Primula saxatilis])

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20
Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 1  MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFL 60

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 61 IVGTKNKAADSVARAATRARCHY 83

[Close]

BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: B1A924 (30S ribosomal protein S2, chloroplastic OS=Carica papaya OX=3649 GN=rps2 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22
Identity = 55/83 (66.27%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: Q49L09 (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps2 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22
Identity = 55/83 (66.27%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22
Identity = 54/83 (65.06%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAA+RGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAATRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATR +CHY
Sbjct: 73 IVGTKNKAADSVARAATRTRCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: P08242 (30S ribosomal protein S2, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps2 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-22
Identity = 54/83 (65.06%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM+ YISAK                   CDLVFDA+SRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: Q0ZJ31 (30S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-22
Identity = 54/83 (65.06%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA +A+CHY
Sbjct: 73 IVGTKNKAADSVARAAIKARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A5H2XMN2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_897S000100 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK-PCDLVFDAASRGKQFLIVGTKNKVVDSVARAAT 60
          MMEA V  GHGTRKWNPRM  YISAK  CDLVFDAASRGKQFLIVGTKNK  DSVARAA 
Sbjct: 22 MMEAGVHFGHGTRKWNPRMAPYISAKQACDLVFDAASRGKQFLIVGTKNKAADSVARAAI 81

Query: 61 RAQCHY 66
          +A+CHY
Sbjct: 82 KARCHY 87

[Close]

BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A6H0EV20 (30S ribosomal protein S2, chloroplastic OS=Cyclantheropsis parviflora OX=387129 GN=rps2 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 56/83 (67.47%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM+ YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMSPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A6H0ERY3 (30S ribosomal protein S2, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps2 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A6G7GDS5 (30S ribosomal protein S2, chloroplastic OS=Primula filchnerae OX=170921 GN=rps2 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A109WWM8 (30S ribosomal protein S2, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=rps2 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]

BLAST of ClCG02G006840 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 )

HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22
Identity = 52/83 (62.65%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLVFDAASRGKQFL 60
          MM A V  GHGTRKWNPRM  YISAK                   CDLVFDAASRGKQFL
Sbjct: 13 MMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  D V+RAA RA+CHY
Sbjct: 73 IVGTKNKAADLVSRAAIRARCHY 95

The following BLAST results are available for this feature:

BLAST of ClCG02G006840 vs. NCBI nr


Match Name	E-value	Identity	Description
BBN69347.1	3.2e-21	81.82	hypothetical protein Prudu_897S000100 [Prunus dulcis]	[more]
YP_009752739.1	2.1e-20	67.47	ribosomal protein S2 [Cyclantheropsis parviflora] >QIT05389.1 ribosomal protein ...	[more]
YP_009236269.1	2.7e-20	67.47	ribosomal protein S2 [Gynostemma pentaphyllum] >YP_009440146.1 ribosomal protein...	[more]
YP_010119723.1	2.7e-20	67.47	ribosomal protein S2 [Hemsleya zhejiangensis] >QRC26965.1 ribosomal protein S2 [...	[more]
YP_010018023.1	2.7e-20	67.47	ribosomal protein S2 [Primula saxatilis] >QOJ47638.1 ribosomal protein S2 [Primu...	[more]

BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1A924	1.7e-22	66.27	30S ribosomal protein S2, chloroplastic OS=Carica papaya OX=3649 GN=rps2 PE=3 SV...	[more]
Q49L09	1.7e-22	66.27	30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus O...	[more]
Q4VZP4	2.3e-22	65.06	30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 ...	[more]
P08242	3.0e-22	65.06	30S ribosomal protein S2, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps2 PE=...	[more]
Q0ZJ31	3.9e-22	65.06	30S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 ...	[more]

BLAST of ClCG02G006840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5H2XMN2	1.5e-21	81.82	Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_897S000100 PE=3 SV=1	[more]
A0A6H0EV20	1.0e-20	67.47	30S ribosomal protein S2, chloroplastic OS=Cyclantheropsis parviflora OX=387129 ...	[more]
A0A6H0ERY3	1.3e-20	67.47	30S ribosomal protein S2, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rp...	[more]
A0A6G7GDS5	1.3e-20	67.47	30S ribosomal protein S2, chloroplastic OS=Primula filchnerae OX=170921 GN=rps2 ...	[more]
A0A109WWM8	1.3e-20	67.47	30S ribosomal protein S2, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=...	[more]

BLAST of ClCG02G006840 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00160.1	5.2e-22	62.65	ribosomal protein S2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.10490		coord: 1..90 e-value: 2.2E-15 score: 58.4
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G006840.2	ClCG02G006840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome