
ClCG02G006840 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACGTATATTCATATTATAAATCTTACTAGAACTGTTCGTTTTTTTTTTTATCAGAAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATGTTAATAAAAAATGGCTTGGGGGATGTTAACAAATTGATCTACTATAGAAATGAGACTATTGGGATTAGTGCCTTAAATCTCGTGGGTCTCGTAGTTTGTATATTGTAAATGATAGTTTATTTATTTAATAAAATAAGAAGTATTTTATTTCACATTTATATCGCATTAACTCAATCCAATAAACCAAGATCCAAAGTTATTTAATGTAACTTGAATAGTATGTAGTTGACACACAAGTAGATTGTATTCAAGTAATAACTTAAAAGGTATGCAACATATGGATAAGGTTGGGTGTGTTATCCTAATAATATTGTGGATACAACCCACTTTGTAATTGTTACAAGAGTTACAATCGATTTGATCCAAATCCTTCATGTGGAGACATGTGAGTGGGGTATCATGTACAAAGAGTTTGTATAAGATCGGACTTTATAACACCGTTAATTGAAGAGACTAACATTTCATAGGATGATCATAGATAACTCAGTCTCAATCCTGAGTGAGTATGGACTCCTATCTATGAGGACAATCCTTTGATTTGTATAAGAGTGACTCGAGTTGCCGACTTAATATGCCTACCACTTTGAGAATTTATCTGAGTAGGGAGCTGAGAACATAACTATACAAGATGGAGTTGACTCTTTTCCGCATTCAGGGAAAGTAGATAAATTGCTCCATTAAGTACTAACCCCGTGTCTTGAACATGGAGCCCTCCCTCCCATTGGCTCGAGAGGGATTTTTTTATGGTAGGACCATAAACAGTTTGTTCATTAGAAGATCAATGAGACTTAAGGAGAAATAAGTAATTACATGGGTAAAACAGTAATTTTGACCCGGTTGTAATTATGAGCAATTTGTGAAGAATCGACTTATTGATGACTGGTTATATCCATGGACACAAAAATACATCTATAGTGCAAAAAGTGCAATTGTGAGTTTTTAGTGGAGTGACCCATAGTTAATGATCTACTACAGAAACGAGACTTCATAAGTTCAAGGACTTGAGAACAGAACAAAAGACGGGCCCCAGGTAGGTGCTTTGTTTGTGAGCTGGAAATTTAAAGATTAGTGATCCCACTGTTTTTAATGTTGGAGTGCTTAAAGGCATAGCATGTGTTGTCGGAATTTCTTTTCAAGAAAGAACTACGATACGAGTAATTCTATAAGGGGCAAGAATCATGAAATGCTCTTTTTTTTCCAGGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGAGTAATTCTATGAGCAAGAATAATGAAATGCTCTTTTTTTCGAGTGTGGGTCCTTATTGGCTCAGTTGCACAAATAACTGGTGTTTGGAAAAGATTACCTATTAGATTAGTGGATTCGATGTAACTCATGACCTCAGACTATCCTAAGGAGTCGGGTCTCCCAATCCAATAAAAGAAATATGGGCAAGACAAAAGAGAAGTATTAGCCCTTCTGGAAAGAGATTCAATAACACTGATCAAAGAGCTAGCAATGACTTTCTTCCCACCTGGAGTGATGGTTAGGCCACGGCCAAGAGAACCCTTCAGATACCGTAAGATGGGTTTTACAGCTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATAACTACGATACGAGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGACTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATAACTACGATACGAGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGACTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA MMEARVRLGHGTRKWNPRMTSYISAKPCDLVFDAASRGKQFLIVGTKNKVVDSVARAATRAQCHYNYDTRRVLVGSDAPITTAYWKRLPIRRLSVPLTLTIQSWMLSEDLRT Homology
BLAST of ClCG02G006840 vs. NCBI nr
Match: BBN69347.1 (hypothetical protein Prudu_897S000100 [Prunus dulcis]) HSP 1 Score: 112.1 bits (279), Expect = 3.2e-21 Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_009752739.1 (ribosomal protein S2 [Cyclantheropsis parviflora] >QIT05389.1 ribosomal protein S2 [Cyclantheropsis parviflora]) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20 Identity = 56/83 (67.47%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_009236269.1 (ribosomal protein S2 [Gynostemma pentaphyllum] >YP_009440146.1 ribosomal protein S2 [Gynostemma longipes] >YP_009440233.1 ribosomal protein S2 [Gynostemma burmanicum (nom. inval.)] >YP_009440320.1 ribosomal protein S2 [Gynostemma pubescens] >AMF84014.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ANI25174.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ART64997.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ATG86925.1 ribosomal protein S2 [Gynostemma longipes] >ATG87012.1 ribosomal protein S2 [Gynostemma burmanicum (nom. inval.)]) HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20 Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_010119723.1 (ribosomal protein S2 [Hemsleya zhejiangensis] >QRC26965.1 ribosomal protein S2 [Hemsleya zhejiangensis]) HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20 Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. NCBI nr
Match: YP_010018023.1 (ribosomal protein S2 [Primula saxatilis] >QOJ47638.1 ribosomal protein S2 [Primula saxatilis]) HSP 1 Score: 109.0 bits (271), Expect = 2.7e-20 Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: B1A924 (30S ribosomal protein S2, chloroplastic OS=Carica papaya OX=3649 GN=rps2 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22 Identity = 55/83 (66.27%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: Q49L09 (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps2 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22 Identity = 55/83 (66.27%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22 Identity = 54/83 (65.06%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: P08242 (30S ribosomal protein S2, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps2 PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.0e-22 Identity = 54/83 (65.06%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy Swiss-Prot
Match: Q0ZJ31 (30S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.9e-22 Identity = 54/83 (65.06%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A5H2XMN2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_897S000100 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21 Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A6H0EV20 (30S ribosomal protein S2, chloroplastic OS=Cyclantheropsis parviflora OX=387129 GN=rps2 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20 Identity = 56/83 (67.47%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A6H0ERY3 (30S ribosomal protein S2, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps2 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20 Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A6G7GDS5 (30S ribosomal protein S2, chloroplastic OS=Primula filchnerae OX=170921 GN=rps2 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20 Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. ExPASy TrEMBL
Match: A0A109WWM8 (30S ribosomal protein S2, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=rps2 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20 Identity = 56/83 (67.47%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of ClCG02G006840 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 ) HSP 1 Score: 101.3 bits (251), Expect = 5.2e-22 Identity = 52/83 (62.65%), Postives = 54/83 (65.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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