ClCG02G006590 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G006590
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	PUM-HD domain-containing protein
Location	CG_Chr02: 7584954 .. 7588135 (+)
RNA-Seq Expression	ClCG02G006590
Synteny	ClCG02G006590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGGTATTTATTTATCCTTAAGTGAAGCTTAATCAAGTAAAATTATTGAAAGTAAGAAATATAACGACTGTTTATTGCATATATGACATGCAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGTAATTGCTTTTTATTATCTTATATATGCATATATTATTACTCTTCTAGTTAGTTGTTTATACATATATTAATGGTTAATTAATTACAGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGTTTGTTTATTTCCATCATTAATGTTTTCATTTTCTCGAAGCATATAATTATCATGTTCATTTAGCAAGTTATTATATACTATTTTTCTAAATGTAATAACATGCCTATATTATTTATCAAGCTGGGAAATGTCCATTAATAGAATGAGATCTTGTAGCATATCGTGTCGTCGGGATATTTAAAGGATCATTTTAGTCTCTAATAACATTTTTTTTTTGATAAAATTGCAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTCATAAAAAGAAGTCCAAATTACAAGAGTTTTAAAGTTGGGTGTATTATATATATATCTTCAAGGACATGTTATTATATATCATTTGTTTCATGTTATATTTGAAGGAATATGCAGCAAAAATAGCTTATCAGGAACATGTTATTTGCACAAAAGTTGCTTTAATTTGTTGGTAACCATTTGTTTTCATAAATTAGTTCTTTGTATTCCTTTATAATTAGTTATTGTTATATATATATATATATATACTAATTCTAGTATCCATCCTCTTTTTTAACGAAGCCACTTCTAATTTTAAAAAGGAGTAAACAAGAAAAAAAACAAATATAAAATCAATAAGGGTAGGTATGGTGACCTAAAAAATAGAAAACAAAGATACTCACGAAAAAAGTAATGTCTAATAAAACTAAAACTTTTGAAATTTAAAAACTAATGTCCCATTTGATAATCAATTTGAATTTTATTAGTTTCTAGTTTTGAAAATTAAAATTATTAAATAGCGAAAATCAAAACATAATAATTTATTAGATAGTGAAATAAATTAAGGAAGTTGGTAATAAAAGTTTGTTGAGAGAAAGGTTTTTAGGTTGAAGAGAATGTGCTCAGAATTCAAGTATATGGGTGATGAAGTGGATGAAGAAAATGGCGAAGAAGCAGAGAATGTATCATTATCTTTATCTATTTACAGTCATCATTAAGAAATTGGATGAGAATTCAAACGTAGTTTGTCTCACATGTTTCATTAGCCACCAACAATCGGTTGTTGTTGGCCGCTATATATATATATATATATATATATATAGCCAAACCTCAACATTGGTCGTCACCTCCCTTCGCCGTCGATTCAATATGTGGGCTTGGGTCAGTTGCCGTTACCACTATATCGTCGACATCAATTTAATCGACTTTCAAAGGAGATCAATTTAATTTGGTTTTAAGAAATTAATAATCGCTTAAGTTTGGATGAGAAAAGATTATTGTTGTAAGATAATAATCCGAAAAATAGTTTCTAATTAAACTTAAACATATCATTGATACAATATTCCATAGAACCTTTGCATGATTGAAGTAATTAAGAAAATCAAAACTTTAGAATGATTTTGTCTTTTGAATGTCAATTTTTAGTTTACCTTTATTTTCTTTGTTCAACTCCAAAATCTATCTTTTGTTATGTGTAAGATGATAATATGCTTATTGCTAGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGAATCGAAGAGGATCTTAGTATTGATATCTACAGAAAAAGAAAGAAAAATAATATTCGTAGCCGTCAGTGTACCTACTGTCATAAAATTCTAGAGAGATTTGACTTGGAAGAGCTAATTAAATAAATTATGGTTTACATTTATGAGTCCTAATTAAATTAGTATCTTTCCTTTGTTAGTTATGTTGGTGTCGCTGTATATTTATTCTTCCATGTAAAAATATGTTGATTACATCAATTATTCAATAAAATACATAAAACAACATGCTACTAGAGTTGGATTCTTGTCTTATTCAACTTTAGGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA

mRNA sequence

ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA

Coding sequence (CDS)

ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA

Protein sequence

MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHCKSREDLKKVKLVVKNEFDMKTLGVAALFDRPLSIYCQLWQIHADLSINTVPSTEPDLLSPVNLKFFVNNIIDLRSTTHNFIDHKSTSHICHVTLCCPSFCQRLPSLFDPVSPNPHHHCLVRFPFKGSRSTTNTLQICRCPPLSCQASIISPISRPTFAHFSQHVARVDLTATVLLVNPPSCRCSTSSRPFVDDQIVPSTATTDQILLLIST

Homology

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: KAE8645845.1 (hypothetical protein Csa_017253 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 3.3e-76
Identity = 142/192 (73.96%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           M PHVLTLAKDF  GH+V++SCF N  P  NELI+LR+AQNC ELAR QA CCILQECIE
Sbjct: 33  MRPHVLTLAKDFHSGHRVIKSCFQNFLPQSNELIILRVAQNCLELARGQASCCILQECIE 92

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YSN+ LRQL+EVLISPLIQDV +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV L
Sbjct: 93  YSNNNLRQLQEVLISPLIQDVYDLSKHPYGNYVIQFMIQLDGTNIGRRIIKELTHKFVEL 152

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+AKG 
Sbjct: 153 SMDKYGSNVVEKCLSCCEGISNDIIFEILEGNGRDRLIQICTNQYGNFVVQTVMSIAKGK 212

Query: 181 AHRLLERTIKSH 193
             +LLE+ IKSH
Sbjct: 213 IRKLLEKAIKSH 224

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: XP_008455521.1 (PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo])

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-56
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIE
Sbjct: 115 MSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIE 174

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV L
Sbjct: 175 YSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVEL 234

Query: 121 SMDKFGSNVVEKCL 135
           SMDK+GSNVVEKC+
Sbjct: 235 SMDKYGSNVVEKCV 248

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: XP_022148742.1 (pumilio homolog 12-like [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 8.7e-45
Identity = 104/191 (54.45%), Postives = 131/191 (68.59%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +S H + LAK    GH VL +CF NLS   NE+ILL IA N  ELA+++ GCCIL  CI 
Sbjct: 224 ISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCIL 283

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           Y+      LR VL++PLIQ+  +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L
Sbjct: 284 YAEG---TLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVEL 343

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
            + K GS+VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKG 
Sbjct: 344 CLSKAGSHVVEKCLGCGEDEAAGIIFEIME--NKENWIQVFTNQYGNYVAQKALSVAKGE 403

Query: 181 AHRLLERTIKS 192
           A+ LL R IKS
Sbjct: 404 AYNLLVRAIKS 409

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: KAF3446583.1 (hypothetical protein FNV43_RR11763 [Rhamnella rubrinervis])

HSP 1 Score: 143.3 bits (360), Expect = 4.6e-30
Identity = 76/196 (38.78%), Postives = 120/196 (61.22%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +S  V+ L K    GH V++ C  N S   NE +L  +A NCFE+A +++GCC+LQ+CI+
Sbjct: 301 LSAGVVALTKS-TNGHHVIQFCLRNFSEKDNEYLLNEVADNCFEIATDKSGCCVLQQCIK 360

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           Y+     +LRE L++ +  +   L+   YGNYV+QY+++L    I   ++ +LK  +  L
Sbjct: 361 YAQG---ELRERLVADITTNAVLLAEDRYGNYVVQYLLELRIPQITENLLRQLKGSYAFL 420

Query: 121 SMDKFGSNVVEKCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           S +K+GSNVVEKCL    +     I+ E++ + N + LL    + YGNYV+Q+A+SV+KG
Sbjct: 421 SCNKYGSNVVEKCLLVSQQEQITQIVLELITSPNASMLL---LDPYGNYVIQSALSVSKG 480

Query: 181 NAHRLLERTIKSHCKS 196
             H+ L+  +  HC S
Sbjct: 481 FIHKALQNLV--HCNS 487

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: KAF3443541.1 (hypothetical protein FNV43_RR13227 [Rhamnella rubrinervis])

HSP 1 Score: 143.3 bits (360), Expect = 4.6e-30
Identity = 76/196 (38.78%), Postives = 120/196 (61.22%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +S  V+ L K    GH V++ C  N S   NE +L  +A NCFE+A +++GCC+LQ+CI+
Sbjct: 301 LSAGVVALTKS-TNGHHVIQFCLRNFSEKDNEYLLNEVADNCFEIATDKSGCCVLQQCIK 360

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           Y+     +LRE L++ +  +   L+   YGNYV+QY+++L    I   ++ +LK  +  L
Sbjct: 361 YAQG---ELRERLVADITTNAVLLAEDRYGNYVVQYLLELRIPQITENLLRQLKGSYAFL 420

Query: 121 SMDKFGSNVVEKCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           S +K+GSNVVEKCL    +     I+ E++ + N + LL    + YGNYV+Q+A+SV+KG
Sbjct: 421 SCNKYGSNVVEKCLLVSQQEQITQIVLELITSPNASMLL---LDPYGNYVIQSALSVSKG 480

Query: 181 NAHRLLERTIKSHCKS 196
             H+ L+  +  HC S
Sbjct: 481 FIHKALQNLV--HCNS 487

[Close]

BLAST of ClCG02G006590 vs. ExPASy Swiss-Prot
Match: Q9C9R6 (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM7 PE=3 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 3.8e-27
Identity = 70/192 (36.46%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI 
Sbjct: 446 LRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIA 505

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V L
Sbjct: 506 YS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQL 565

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG 
Sbjct: 566 SMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQ---DPYANFVIQAALAATKGP 625

Query: 181 AHRLLERTIKSH 193
            H  L   I+ H
Sbjct: 626 LHASLVEVIRPH 630

[Close]

BLAST of ClCG02G006590 vs. ExPASy Swiss-Prot
Match: Q9LM20 (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM8 PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 5.5e-26
Identity = 65/192 (33.85%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI 
Sbjct: 311 LRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIA 370

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS+      RE L++ + ++   L+  PYGNY +Q++++L   +    ++ +LK  +V L
Sbjct: 371 YSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVEL 430

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+
Sbjct: 431 SMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQ---DPYANFVIQAALAVTKGS 490

Query: 181 AHRLLERTIKSH 193
            H  L   I+ H
Sbjct: 491 LHATLVEVIRPH 495

[Close]

BLAST of ClCG02G006590 vs. ExPASy Swiss-Prot
Match: P25339 (Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PUF4 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-25
Identity = 63/191 (32.98%), Postives = 107/191 (56.02%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P+ + L+KD  G H V++ C   L P   + I   I+ +C ++A ++ GCC+LQ C++
Sbjct: 673 LRPYTVQLSKDLNGNH-VIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLD 732

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNK 120
           +      +  + L   L+  VD L++ P+GNYV+QY+I  +     +    +I++ LK +
Sbjct: 733 HGT---TEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPR 792

Query: 121 FVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSV 180
            + LS+ KFGSNV+EK L       + +I EIL N  E  +  +  + YGNYV+QTA+ +
Sbjct: 793 AIELSIHKFGSNVIEKILKTAIVS-EPMILEILNNGGETGIQSLLNDSYGNYVLQTALDI 852

Query: 181 AKGNAHRLLER 188
           +      L +R
Sbjct: 853 SHKQNDYLYKR 858

[Close]

BLAST of ClCG02G006590 vs. ExPASy Swiss-Prot
Match: Q9LVC3 (Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 6.1e-25
Identity = 69/191 (36.13%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 5   VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSND 64
           ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  
Sbjct: 394 IVHLIKNVNGNH-VVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG 453

Query: 65  KLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDK 124
           + +Q    L+S +  +   LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K
Sbjct: 454 EQKQ---HLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQK 513

Query: 125 FGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRL 184
             SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H L
Sbjct: 514 CSSNVVEKCLKLADDKHRARI--IRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHAL 573

Query: 185 LERTIKSHCKS 196
           L   IK +  S
Sbjct: 574 LVDAIKLNISS 578

[Close]

BLAST of ClCG02G006590 vs. ExPASy Swiss-Prot
Match: Q1PFN9 (Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-23
Identity = 65/179 (36.31%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI 
Sbjct: 362 LKPGFLALVKDLNGNH-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCI- 421

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
             ++ +   RE L++ + ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L
Sbjct: 422 --SNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAEL 481

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           +  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG
Sbjct: 482 ATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKG 531

[Close]

BLAST of ClCG02G006590 vs. ExPASy TrEMBL
Match: A0A0A0K7S4 (PUM-HD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.2e-62
Identity = 121/161 (75.16%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 32  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGN 91
           +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 92  YVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILEN 151
           YVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE 
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEG 121

Query: 152 NNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSH 193
           N  ++L+QICTNQYGN+VVQT MS+AKG   +LLE+ IKSH
Sbjct: 122 NGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSH 162

[Close]

BLAST of ClCG02G006590 vs. ExPASy TrEMBL
Match: A0A1S3C139 (putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495672 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIE
Sbjct: 115 MSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIE 174

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV L
Sbjct: 175 YSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVEL 234

Query: 121 SMDKFGSNVVEKCL 135
           SMDK+GSNVVEKC+
Sbjct: 235 SMDKYGSNVVEKCV 248

[Close]

BLAST of ClCG02G006590 vs. ExPASy TrEMBL
Match: A0A6J1D5W5 (pumilio homolog 12-like OS=Momordica charantia OX=3673 GN=LOC111017335 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.2e-45
Identity = 104/191 (54.45%), Postives = 131/191 (68.59%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +S H + LAK    GH VL +CF NLS   NE+ILL IA N  ELA+++ GCCIL  CI 
Sbjct: 224 ISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLELAKDKNGCCILPFCIL 283

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           Y+      LR VL++PLIQ+  +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L
Sbjct: 284 YAEG---TLRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANIGARVIQVLRNKFVEL 343

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
            + K GS+VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKG 
Sbjct: 344 CLSKAGSHVVEKCLGCGEDEAAGIIFEIME--NKENWIQVFTNQYGNYVAQKALSVAKGE 403

Query: 181 AHRLLERTIKS 192
           A+ LL R IKS
Sbjct: 404 AYNLLVRAIKS 409

[Close]

BLAST of ClCG02G006590 vs. ExPASy TrEMBL
Match: A0A1D1XXP3 (Pumilio 12 OS=Anthurium amnicola OX=1678845 GN=APUM12_0 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.0e-30
Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P +L L KD  G H V + C   LSP  ++ +      +C ELAR++ GCC+LQ+C+ 
Sbjct: 637 VKPGILALIKDNNGNH-VAQRCLQCLSPELSKFLFDAAVVHCVELARDRRGCCVLQKCLS 696

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           + +    QLRE LIS +  +   LS  P+GNYVIQY+++L  A+    ++N+LK+ F  L
Sbjct: 697 HCSG---QLREQLISEISCNALVLSQDPFGNYVIQYLLELKVASAMEDVLNQLKDNFGYL 756

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM K+ SNVVEKCL C     D  I  ILE     QLLQI  + YGNYV+Q+A+ + KG 
Sbjct: 757 SMQKYSSNVVEKCLKCATE--DQRILIILELIKCPQLLQILQDPYGNYVIQSAIKLCKGA 816

Query: 181 AHRLLERTIKSH 193
            H    + I+ H
Sbjct: 817 LHAAFMKVIRPH 822

[Close]

BLAST of ClCG02G006590 vs. ExPASy TrEMBL
Match: A0A6P3ZU94 (putative pumilio homolog 8, chloroplastic isoform X2 OS=Ziziphus jujuba OX=326968 GN=LOC107420526 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-29
Identity = 75/193 (38.86%), Postives = 118/193 (61.14%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  + L K    GH V++ C  N S   NE +L  +  NC+ +A +++GCC+LQ+CI+
Sbjct: 350 LGPGAVALTKS-TNGHHVIQYCLKNFSEKDNEYLLNEVVDNCYGIATDKSGCCVLQQCIK 409

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS     +LRE+L++ ++ +   L+   YGNYV+QY++ L    +   I+ +LK  F +L
Sbjct: 410 YSQG---ELRELLVAEIVTNAMLLAEDRYGNYVVQYLLDLRIPQVTASILRQLKGSFSSL 469

Query: 121 SMDKFGSNVVEKCLSCCEGGFD---YIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA 180
           S +K+GSNVVEKCL     G D    II E++ + N + LL    + YGNYV+Q+A+SV+
Sbjct: 470 SCNKYGSNVVEKCLLVT--GPDQSALIIMELITSPNPSMLL---LDPYGNYVIQSALSVS 529

Query: 181 KGNAHRLLERTIK 191
           KG  H+ LE  ++
Sbjct: 530 KGIIHKALENLVQ 533

[Close]

BLAST of ClCG02G006590 vs. TAIR 10
Match: AT1G78160.1 (pumilio 7 )

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-28
Identity = 70/192 (36.46%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI 
Sbjct: 446 LRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIA 505

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V L
Sbjct: 506 YS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQL 565

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG 
Sbjct: 566 SMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQ---DPYANFVIQAALAATKGP 625

Query: 181 AHRLLERTIKSH 193
            H  L   I+ H
Sbjct: 626 LHASLVEVIRPH 630

[Close]

BLAST of ClCG02G006590 vs. TAIR 10
Match: AT1G22240.1 (pumilio 8 )

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-27
Identity = 65/192 (33.85%), Postives = 110/192 (57.29%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI 
Sbjct: 311 LRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIA 370

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS+      RE L++ + ++   L+  PYGNY +Q++++L   +    ++ +LK  +V L
Sbjct: 371 YSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVEL 430

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+
Sbjct: 431 SMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQ---DPYANFVIQAALAVTKGS 490

Query: 181 AHRLLERTIKSH 193
            H  L   I+ H
Sbjct: 491 LHATLVEVIRPH 495

[Close]

BLAST of ClCG02G006590 vs. TAIR 10
Match: AT5G56510.1 (pumilio 12 )

HSP 1 Score: 116.7 bits (291), Expect = 4.3e-26
Identity = 69/191 (36.13%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 5   VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSND 64
           ++ L K+  G H V++ C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  
Sbjct: 394 IVHLIKNVNGNH-VVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG 453

Query: 65  KLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDK 124
           + +Q    L+S +  +   LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K
Sbjct: 454 EQKQ---HLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQK 513

Query: 125 FGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRL 184
             SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H L
Sbjct: 514 CSSNVVEKCLKLADDKHRARI--IRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHAL 573

Query: 185 LERTIKSHCKS 196
           L   IK +  S
Sbjct: 574 LVDAIKLNISS 578

[Close]

BLAST of ClCG02G006590 vs. TAIR 10
Match: AT1G35730.1 (pumilio 9 )

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-24
Identity = 65/179 (36.31%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI 
Sbjct: 362 LKPGFLALVKDLNGNH-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCI- 421

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
             ++ +   RE L++ + ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L
Sbjct: 422 --SNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAEL 481

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           +  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG
Sbjct: 482 ATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKG 531

[Close]

BLAST of ClCG02G006590 vs. TAIR 10
Match: AT4G08840.1 (pumilio 11 )

HSP 1 Score: 109.4 bits (272), Expect = 6.9e-24
Identity = 64/190 (33.68%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 3   PHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYS 62
           P  L+L ++  G H +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS
Sbjct: 356 PGFLSLFRELNGNHVIL-NCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYS 415

Query: 63  NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSM 122
              + +  E L+  + ++   L+  P+GNY++QY+I+      G  ++ EL+  +V L+ 
Sbjct: 416 ---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVG--GVNVLFELRGNYVKLAT 475

Query: 123 DKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAH 182
            KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  KG   
Sbjct: 476 QKFGSHVVEKCLRYYPESRSQIVNELVSVLNFGYLLQ---DPYANYVIQCALSKTKGFVR 535

Query: 183 RLLERTIKSH 193
             L   ++ +
Sbjct: 536 ASLVEKVRRY 536

The following BLAST results are available for this feature:

BLAST of ClCG02G006590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645845.1	3.3e-76	73.96	hypothetical protein Csa_017253 [Cucumis sativus]	[more]
XP_008455521.1	2.2e-56	79.10	PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]	[more]
XP_022148742.1	8.7e-45	54.45	pumilio homolog 12-like [Momordica charantia]	[more]
KAF3446583.1	4.6e-30	38.78	hypothetical protein FNV43_RR11763 [Rhamnella rubrinervis]	[more]
KAF3443541.1	4.6e-30	38.78	hypothetical protein FNV43_RR13227 [Rhamnella rubrinervis]	[more]

BLAST of ClCG02G006590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9R6	3.8e-27	36.46	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU...	[more]
Q9LM20	5.5e-26	33.85	Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU...	[more]
P25339	4.7e-25	32.98	Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae (strain ATCC...	[more]
Q9LVC3	6.1e-25	36.13	Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2	[more]
Q1PFN9	2.0e-23	36.31	Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1	[more]

BLAST of ClCG02G006590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7S4	2.2e-62	75.16	PUM-HD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4...	[more]
A0A1S3C139	1.1e-56	79.10	putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349567...	[more]
A0A6J1D5W5	4.2e-45	54.45	pumilio homolog 12-like OS=Momordica charantia OX=3673 GN=LOC111017335 PE=4 SV=1	[more]
A0A1D1XXP3	5.0e-30	42.19	Pumilio 12 OS=Anthurium amnicola OX=1678845 GN=APUM12_0 PE=4 SV=1	[more]
A0A6P3ZU94	2.5e-29	38.86	putative pumilio homolog 8, chloroplastic isoform X2 OS=Ziziphus jujuba OX=32696...	[more]

BLAST of ClCG02G006590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78160.1	2.7e-28	36.46	pumilio 7	[more]
AT1G22240.1	3.9e-27	33.85	pumilio 8	[more]
AT5G56510.1	4.3e-26	36.13	pumilio 12	[more]
AT1G35730.1	1.4e-24	36.31	pumilio 9	[more]
AT4G08840.1	6.9e-24	33.68	pumilio 11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 37..72 e-value: 6.0 score: 14.5 coord: 76..111 e-value: 1.7 score: 17.6 coord: 112..147 e-value: 0.003 score: 26.8 coord: 152..186 e-value: 1.6 score: 17.7
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 156..178 e-value: 0.0012 score: 18.5 coord: 117..139 e-value: 1.6E-6 score: 27.7 coord: 83..99 e-value: 6.6E-4 score: 19.3 coord: 41..68 e-value: 3.0E-6 score: 26.8
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 76..111 score: 8.453927
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 112..147 score: 8.873892
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 37..75 score: 8.803898
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 152..190 score: 8.243944
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..215 e-value: 3.4E-51 score: 176.3
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 3..195
None	No IPR available	PANTHER	PTHR12537:SF147	PUMILIO HOMOLOG 12	coord: 3..195
IPR033133	Pumilio homology domain	PROSITE	PS50303	PUM_HD	coord: 1..213 score: 38.55093
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 3..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G006590.2	ClCG02G006590.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006417	regulation of translation
molecular_function	GO:0003723	RNA binding