ClCG02G006530 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G006530
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	GRF-type domain-containing protein
Location	CG_Chr02: 7510879 .. 7513307 (+)
RNA-Seq Expression	ClCG02G006530
Synteny	ClCG02G006530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGATAATTGTTTTGGGATTTTTTTTTCTTTTTTTTTTCTTTCATTGGGGTTGCTATCATGAAGAAAACGACTTTTGAAAGTTTACATTTTCCATTTTATGTTTAGCCATTTTGGTGAAAAGGAATAAGAAGATTTTCAGTACAGTATGATGTTAGGATTTTGAAAATGTTTTGGATTTAATTATATTCTTTGTTTACTGCTGGAAAAAAATAAAAACCTTCTTTTCTTTAAGATTTTAGTACTATCCCATGATATCGATGGCTCTTATTCTAGTACACGGATTTTATGAATGTAATCTTAAATTTTGTGTTAATCTAAATGTAGATTTCTTAATATATCCCATTGTTTGGTTCTTTATGATTAATGTCGTGAATGAGTTGTTGTTGGCATTGTAGTTGTTGTTGGCATTGTTCTTAGAGTATTACCTTCTGGAGGTAGCTTCTGAGATCAAACTGGAAAGAGACTCTTAATTCTGTTGTAGCAAAAGTTGTGAAAAGATTTAGTTTTGCATATAGAACTAAGTTCTCAACATCCTTGGATTGGGATTCTTTTACTTGCAGCACCCCAAACACATCGTGTATACATTTTTTCGGTATCTTTATGATGTCCTCTATCTTTCGCTGTAATGATGCTGCACAAATGCAACAATGTCTACACTGTTAGATGTTTGTGATACTTGTATAGAAATATGTGATAGTTCATTATAAAAATGTGTTAGCTTCATGGTTTCAACTTTCAAGGAGTGCAGAGGATATCCATCCAATCGTCGACATATCTGTCATGAGAGATGTGTTGTATCTTCTAAAATTTATATAACATATATGTTCTGACAGGTGGAGTCAACCGGTTGTGTATTATCAAGCTAGTGAAGTTGACTTTAAATTGGCTTATTTGATTGTTGATACTTCTAATATGTCATATCGGACAGCGTGAGGAGGAGAAAATGAACTATAATTCAATGAAATTCTACGAAATCAGTGATTCATGTTGTAGCTTGTGTCAGCATTTTGGTGGCGAGGGCTTTGGATGCTTAGAGATACTTTCCAGGGTCCTATTTCAAAGATCCTAAGGTTAAATAAGTATATAATTTAAAACTCTTATTGTCTTTTAGAACTGGTCTTGCGGTAGGCAAAGCCTCGCCATGGATTAGTTAAATCTCAGTTTTCAAATGAAGAGAACAAAAGGCAAAAGTAATTTTTCAGTTTAGCTTAGTATTTGATGTCCTTGTATTGTTTTTATTGGTTTTACAGTACCATCTTCTTCTTTCTAATTGTCTCTCATTTATTTTTAACTTTGAGAATACTTCAAGGTCAAGTTATCTATCTTTCTTGCCCTACTGATACTGGTTAGGATAGTGTCTGTTTAAGGGGACCTTGTGAAAAATTGGCTGAGAGTTGATACTGCATAGTGCAACTTAGTTGAATGGCCGAGATCGTTGACTTTATCAAAAGAGTGCAATCAAGCTCGAAATTCGGACTCCTTGATTGCACTCGTTGACTAGACAACACTCTCGAGTGGAATACACGTCGGTTTTGGAGATCACAGCGGATCTGAATTCCTCTACCCTGCAATACGCGATGGTTTTGGAAAATTCTTGGAATAGACTAACAGATGTTCTGTCCATTTGACAAGGGGAGAGCCTAGTTTGTTCAAAAGCTGTAGAATTCTTGTAGGAAATTTTAAGTTTCTTGACATTCTCATCATGGTTTGATTGGTTGATTGATTTCAGGATCCATACTTGAACAATGTCTTTGGAAATTTATGAGGAATCTAATCTTGAATGTTACTGTGGAGTGCCTGCCAAACTACGAATGTCTCAGACAGAAAAAAATCCATTCAGGCTATTGTACAACTGTCCAAAGGAGATATCTCAAGTAAGCATATAAATCCTCTATCCTCATCCAACTTAAAGAACTACTACAAGTTGATATACTCTGATTTTTGTTCTGGACACTGCCAGCAATGTGGTTTCTTTCATTGGGCTGATGAAACTGAACCATTTGATGATAGACACGCTAACGAACTAGACTTGATCCGCAACGTGTGTATTCGTCTAACAGAAAGATTTGAGGAAATCGAAGAGGAGCACGAGGATGAGAAAGCAGAGTGGGAAAGGGAAAAGGCTGAGCTAACATTAAAACTATCAGCTCTGCAGACTCAGCTTGATGATATTCATAATAGAATAAGGATGACGAATGAATCCTTTTCAATGCCTCCACTTTCCATTAGGGACGACGAGGATGAGGATGATGATGCATTTGTTATATATAATTTGTAAATAGATTATTGTAAATTATATCAAGTGAAATGAGAGATGATGTAAAAAATATTTAAGCTATCTATTTTCAGTACGTGTTTAAGCTTTTATTTAAAAGTTATGGTTGTTCCATTAATTTTCTTCCTAGTTTGATGGATGGATGACTCCC

mRNA sequence

ATTCGATAATTGTTTTGGGATTTTTTTTTCTTTTTTTTTTCTTTCATTGGGGTTGCTATCATGAAGAAAACGACTTTTGAAAGTTTACATTTTCCATTTTATGTTTAGCCATTTTGGTGAAAAGGAATAAGAAGATTTTCAGTACAGTATGATGTTAGGATTTTGAAAATGTTTTGGATTTAATTATATTCTTTGTTTACTGCTGGAAAAAAATAAAAACCTTCTTTTCTTTAAGATTTTAGTACTATCCCATGATATCGATGGCTCTTATTCTAGTACACGGATTTTATGAATGTAATCTTAAATTTTGTGTTAATCTAAATGTAGATTTCTTAATATATCCCATTGTTTGGTTCTTTATGATTAATGTCGTGAATGAGTTGTTGTTGGCATTGTAGTTGTTGTTGGCATTGTTCTTAGAGTATTACCTTCTGGAGGTAGCTTCTGAGATCAAACTGGAAAGAGACTCTTAATTCTGTTGTAGCAAAAGTTGTGAAAAGATTTAGTTTTGCATATAGAACTAAGTTCTCAACATCCTTGGATTGGGATTCTTTTACTTGCAGCACCCCAAACACATCGTGTATACATTTTTTCGGTATCTTTATGATGTCCTCTATCTTTCGCTGTAATGATGCTGCACAAATGCAACAATGTCTACACTGTTAGATGTTTGTGATACTTGTATAGAAATATGTGATAGTTCATTATAAAAATGTGTTAGCTTCATGGTTTCAACTTTCAAGGAGTGCAGAGGATATCCATCCAATCGTCGACATATCTGTCATGAGAGATGTGTTGTATCTTCTAAAATTTATATAACATATATGTTCTGACAGGTGGAGTCAACCGGTTGTGTATTATCAAGCTAGTGAAGTTGACTTTAAATTGGCTTATTTGATTGTTGATACTTCTAATATGTCATATCGGACAGCGTGAGGAGGAGAAAATGAACTATAATTCAATGAAATTCTACGAAATCAGTGATTCATGTTGTAGCTTGTGTCAGCATTTTGGTGGCGAGGGCTTTGGATGCTTAGAGATACTTTCCAGGGTCCTATTTCAAAGATCCTAAGGTTAAATAAGTATATAATTTAAAACTCTTATTGTCTTTTAGAACTGGTCTTGCGGTAGGCAAAGCCTCGCCATGGATTAGTTAAATCTCAGTTTTCAAATGAAGAGAACAAAAGGCAAAAGTAATTTTTCAGTTTAGCTTAGTATTTGATGTCCTTGTATTGTTTTTATTGGTTTTACAGTACCATCTTCTTCTTTCTAATTGTCTCTCATTTATTTTTAACTTTGAGAATACTTCAAGGTCAAGTTATCTATCTTTCTTGCCCTACTGATACTGGTTAGGATAGTGATCCATACTTGAACAATGTCTTTGGAAATTTATGAGGAATCTAATCTTGAATGTTACTGTGGAGTGCCTGCCAAACTACGAATGTCTCAGACAGAAAAAAATCCATTCAGGCTATTGTACAACTGTCCAAAGGAGATATCTCAACAATGTGGTTTCTTTCATTGGGCTGATGAAACTGAACCATTTGATGATAGACACGCTAACGAACTAGACTTGATCCGCAACGTGTGTATTCGTCTAACAGAAAGATTTGAGGAAATCGAAGAGGAGCACGAGGATGAGAAAGCAGAGTGGGAAAGGGAAAAGGCTGAGCTAACATTAAAACTATCAGCTCTGCAGACTCAGCTTGATGATATTCATAATAGAATAAGGATGACGAATGAATCCTTTTCAATGCCTCCACTTTCCATTAGGGACGACGAGGATGAGGATGATGATGCATTTGTTATATATAATTTGTAAATAGATTATTGTAAATTATATCAAGTGAAATGAGAGATGATGTAAAAAATATTTAAGCTATCTATTTTCAGTACGTGTTTAAGCTTTTATTTAAAAGTTATGGTTGTTCCATTAATTTTCTTCCTAGTTTGATGGATGGATGACTCCC

Coding sequence (CDS)

ATGTCTTTGGAAATTTATGAGGAATCTAATCTTGAATGTTACTGTGGAGTGCCTGCCAAACTACGAATGTCTCAGACAGAAAAAAATCCATTCAGGCTATTGTACAACTGTCCAAAGGAGATATCTCAACAATGTGGTTTCTTTCATTGGGCTGATGAAACTGAACCATTTGATGATAGACACGCTAACGAACTAGACTTGATCCGCAACGTGTGTATTCGTCTAACAGAAAGATTTGAGGAAATCGAAGAGGAGCACGAGGATGAGAAAGCAGAGTGGGAAAGGGAAAAGGCTGAGCTAACATTAAAACTATCAGCTCTGCAGACTCAGCTTGATGATATTCATAATAGAATAAGGATGACGAATGAATCCTTTTCAATGCCTCCACTTTCCATTAGGGACGACGAGGATGAGGATGATGATGCATTTGTTATATATAATTTGTAA

Protein sequence

MSLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRHANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMTNESFSMPPLSIRDDEDEDDDAFVIYNL

Homology

[Close]

BLAST of ClCG02G006530 vs. NCBI nr
Match: XP_004136954.1 (uncharacterized protein LOC101219463 [Cucumis sativus] >XP_031745287.1 uncharacterized protein LOC101219463 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 8.4e-62
Identity = 124/150 (82.67%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 2   SLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRH 61
           S EIYEES LECYCGV AKLRMS TEK PFRL YNCPKEISQQCGFFHWADE EP +DRH
Sbjct: 3   SSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRH 62

Query: 62  ANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMT 121
           ANELDLIRNVCIRLTER +EI EEHEDEK EWEREKAELTLKLS LQTQLDDIHNR+R+T
Sbjct: 63  ANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAELTLKLSTLQTQLDDIHNRVRIT 122

Query: 122 NESFSMPP---LSIRDDEDEDDDAFVIYNL 149
           NESFSMPP   LSIRD  D+DD+  VIY L
Sbjct: 123 NESFSMPPFESLSIRD--DDDDNTLVIYTL 150

[Close]

BLAST of ClCG02G006530 vs. NCBI nr
Match: XP_008455003.1 (PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo] >XP_008455004.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo] >XP_008455006.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo] >XP_016901682.1 PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo] >KAA0031344.1 uncharacterized protein E6C27_scaffold139G00980 [Cucumis melo var. makuwa] >TYK06797.1 uncharacterized protein E5676_scaffold13G00990 [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 123/150 (82.00%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 2   SLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRH 61
           S EIYEES LECYCG  AKLRMS TEKNPFRL YNCPKE+SQQCGFFHWADE EP DDRH
Sbjct: 3   SSEIYEESYLECYCGAAAKLRMSHTEKNPFRLFYNCPKELSQQCGFFHWADEPEPSDDRH 62

Query: 62  ANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMT 121
           ANELDLIRNVCIRLTER +EI EEHEDEK EWEREKAELTLKLS LQTQLDDI+NRIR+T
Sbjct: 63  ANELDLIRNVCIRLTERLDEIIEEHEDEKEEWEREKAELTLKLSTLQTQLDDINNRIRIT 122

Query: 122 NESFSMPP---LSIRDDEDEDDDAFVIYNL 149
           NESFSMPP   LSIRDD D+++D  V+Y L
Sbjct: 123 NESFSMPPFESLSIRDD-DDNNDTLVVYAL 151

[Close]

BLAST of ClCG02G006530 vs. NCBI nr
Match: KAE8645848.1 (hypothetical protein Csa_017077 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 119/141 (84.40%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 2   SLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRH 61
           S EIYEES LECYCGV AKLRMS TEK PFRL YNCPKEISQQCGFFHWADE EP +DRH
Sbjct: 3   SSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRH 62

Query: 62  ANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMT 121
           ANELDLIRNVCIRLTER +EI EEHEDEK EWEREKAELTLKLS LQTQLDDIHNR+R+T
Sbjct: 63  ANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAELTLKLSTLQTQLDDIHNRVRIT 122

Query: 122 NESFSMPP---LSIRDDEDED 140
           NESFSMPP   LSIRDD+D++
Sbjct: 123 NESFSMPPFESLSIRDDDDDN 143

[Close]

BLAST of ClCG02G006530 vs. NCBI nr
Match: XP_022148840.1 (uncharacterized protein LOC111017399 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 8.9e-56
Identity = 112/148 (75.68%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 4   EIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRHAN 63
           EI+EES LECYCG+PAKLR SQT KNPFRL YNCPKEISQQCGFFHWADE EP DDRH  
Sbjct: 5   EIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVE 64

Query: 64  ELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMTNE 123
           EL+LIRNVC+ L +R +EIEEEH++EKAEWER+K ELTL+L  LQ+QLDDI +RIRM NE
Sbjct: 65  ELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVTLQSQLDDIQHRIRMANE 124

Query: 124 SFSMPP---LSIRDDEDEDDDAFVIYNL 149
           SFSMPP   LSIRD  DE DDA VIY L
Sbjct: 125 SFSMPPLDALSIRD--DEGDDALVIYTL 150

[Close]

BLAST of ClCG02G006530 vs. NCBI nr
Match: KAF2294607.1 (hypothetical protein GH714_013386 [Hevea brasiliensis])

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37
Identity = 79/147 (53.74%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 3   LEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRHA 62
           L  +E+S + C CG+PAKLR+SQT +NPFRL YNCP+  + QCGFF W DE  P  DRH 
Sbjct: 21  LSYHEDSEVRCSCGLPAKLRVSQTPRNPFRLFYNCPRSCNFQCGFFRWWDEPAPTGDRHT 80

Query: 63  NELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMTN 122
           +E++LIRN C RL  R +EIE+ HE++++ WEREK+EL LKLS +QT+LD+I  R+R  N
Sbjct: 81  DEVNLIRNECARLQGRLDEIEQRHENDRSVWEREKSELMLKLSTVQTELDEIKERLRTVN 140

Query: 123 ESFSMPPL-SIRDDEDEDDDAFVIYNL 149
           ES  MPPL ++   +DE DD   I+ +
Sbjct: 141 ESDLMPPLDNLLIADDEGDDVIEIHTI 167

[Close]

BLAST of ClCG02G006530 vs. ExPASy TrEMBL
Match: A0A0A0K2H6 (GRF-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071640 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62
Identity = 124/150 (82.67%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 2   SLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRH 61
           S EIYEES LECYCGV AKLRMS TEK PFRL YNCPKEISQQCGFFHWADE EP +DRH
Sbjct: 3   SSEIYEESYLECYCGVAAKLRMSHTEKGPFRLFYNCPKEISQQCGFFHWADEREPSNDRH 62

Query: 62  ANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMT 121
           ANELDLIRNVCIRLTER +EI EEHEDEK EWEREKAELTLKLS LQTQLDDIHNR+R+T
Sbjct: 63  ANELDLIRNVCIRLTERLDEIVEEHEDEKEEWEREKAELTLKLSTLQTQLDDIHNRVRIT 122

Query: 122 NESFSMPP---LSIRDDEDEDDDAFVIYNL 149
           NESFSMPP   LSIRD  D+DD+  VIY L
Sbjct: 123 NESFSMPPFESLSIRD--DDDDNTLVIYTL 150

[Close]

BLAST of ClCG02G006530 vs. ExPASy TrEMBL
Match: A0A1S4E0B8 (uncharacterized protein LOC103495284 OS=Cucumis melo OX=3656 GN=LOC103495284 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 123/150 (82.00%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 2   SLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRH 61
           S EIYEES LECYCG  AKLRMS TEKNPFRL YNCPKE+SQQCGFFHWADE EP DDRH
Sbjct: 3   SSEIYEESYLECYCGAAAKLRMSHTEKNPFRLFYNCPKELSQQCGFFHWADEPEPSDDRH 62

Query: 62  ANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMT 121
           ANELDLIRNVCIRLTER +EI EEHEDEK EWEREKAELTLKLS LQTQLDDI+NRIR+T
Sbjct: 63  ANELDLIRNVCIRLTERLDEIIEEHEDEKEEWEREKAELTLKLSTLQTQLDDINNRIRIT 122

Query: 122 NESFSMPP---LSIRDDEDEDDDAFVIYNL 149
           NESFSMPP   LSIRDD D+++D  V+Y L
Sbjct: 123 NESFSMPPFESLSIRDD-DDNNDTLVVYAL 151

[Close]

BLAST of ClCG02G006530 vs. ExPASy TrEMBL
Match: A0A5A7SJM5 (GRF-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00990 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 123/150 (82.00%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 2   SLEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRH 61
           S EIYEES LECYCG  AKLRMS TEKNPFRL YNCPKE+SQQCGFFHWADE EP DDRH
Sbjct: 3   SSEIYEESYLECYCGAAAKLRMSHTEKNPFRLFYNCPKELSQQCGFFHWADEPEPSDDRH 62

Query: 62  ANELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMT 121
           ANELDLIRNVCIRLTER +EI EEHEDEK EWEREKAELTLKLS LQTQLDDI+NRIR+T
Sbjct: 63  ANELDLIRNVCIRLTERLDEIIEEHEDEKEEWEREKAELTLKLSTLQTQLDDINNRIRIT 122

Query: 122 NESFSMPP---LSIRDDEDEDDDAFVIYNL 149
           NESFSMPP   LSIRDD D+++D  V+Y L
Sbjct: 123 NESFSMPPFESLSIRDD-DDNNDTLVVYAL 151

[Close]

BLAST of ClCG02G006530 vs. ExPASy TrEMBL
Match: A0A6J1D427 (uncharacterized protein LOC111017399 OS=Momordica charantia OX=3673 GN=LOC111017399 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.3e-56
Identity = 112/148 (75.68%), Postives = 124/148 (83.78%), Query Frame = 0


Query: 4   EIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRHAN 63
           EI+EES LECYCG+PAKLR SQT KNPFRL YNCPKEISQQCGFFHWADE EP DDRH  
Sbjct: 5   EIFEESELECYCGLPAKLRTSQTPKNPFRLFYNCPKEISQQCGFFHWADEPEPSDDRHVE 64

Query: 64  ELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMTNE 123
           EL+LIRNVC+ L +R +EIEEEH++EKAEWER+K ELTL+L  LQ+QLDDI +RIRM NE
Sbjct: 65  ELNLIRNVCLHLQDRLDEIEEEHDNEKAEWERDKEELTLQLVTLQSQLDDIQHRIRMANE 124

Query: 124 SFSMPP---LSIRDDEDEDDDAFVIYNL 149
           SFSMPP   LSIRD  DE DDA VIY L
Sbjct: 125 SFSMPPLDALSIRD--DEGDDALVIYTL 150

[Close]

BLAST of ClCG02G006530 vs. ExPASy TrEMBL
Match: A0A6A6L2I8 (GRF-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_013230 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 6.9e-38
Identity = 79/147 (53.74%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 3   LEIYEESNLECYCGVPAKLRMSQTEKNPFRLLYNCPKEISQQCGFFHWADETEPFDDRHA 62
           L  +E+S + C CG+PAKLR+SQT +NPFRL YNCP+  + QCGFF W DE  P  DRH 
Sbjct: 29  LSYHEDSEVRCSCGLPAKLRVSQTPRNPFRLFYNCPRSCNFQCGFFRWWDEPAPTGDRHT 88

Query: 63  NELDLIRNVCIRLTERFEEIEEEHEDEKAEWEREKAELTLKLSALQTQLDDIHNRIRMTN 122
           +E++LIRN C RL  R +EIE+ HE++++ WEREK+EL LKLS +QT+LD+I  R+R  N
Sbjct: 89  DEVNLIRNECARLQGRLDEIEQRHENDRSVWEREKSELMLKLSTVQTELDEIKERLRTVN 148

Query: 123 ESFSMPPL-SIRDDEDEDDDAFVIYNL 149
           ES  MPPL ++   +DE DD   I+ +
Sbjct: 149 ESDLMPPLDNLLIADDEGDDVIEIHTI 175

The following BLAST results are available for this feature:

BLAST of ClCG02G006530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136954.1	8.4e-62	82.67	uncharacterized protein LOC101219463 [Cucumis sativus] >XP_031745287.1 uncharact...	[more]
XP_008455003.1	2.4e-61	82.00	PREDICTED: uncharacterized protein LOC103495284 [Cucumis melo] >XP_008455004.1 P...	[more]
KAE8645848.1	1.6e-60	84.40	hypothetical protein Csa_017077 [Cucumis sativus]	[more]
XP_022148840.1	8.9e-56	75.68	uncharacterized protein LOC111017399 [Momordica charantia]	[more]
KAF2294607.1	1.4e-37	53.74	hypothetical protein GH714_013386 [Hevea brasiliensis]	[more]

BLAST of ClCG02G006530 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG02G006530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2H6	4.0e-62	82.67	GRF-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071640 PE...	[more]
A0A1S4E0B8	1.2e-61	82.00	uncharacterized protein LOC103495284 OS=Cucumis melo OX=3656 GN=LOC103495284 PE=...	[more]
A0A5A7SJM5	1.2e-61	82.00	GRF-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1D427	4.3e-56	75.68	uncharacterized protein LOC111017399 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6A6L2I8	6.9e-38	53.74	GRF-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_013230...	[more]

BLAST of ClCG02G006530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..117
None	No IPR available	PANTHER	PTHR33248	ZINC ION-BINDING PROTEIN	coord: 3..130
None	No IPR available	PANTHER	PTHR33248:SF19	RETICULOCYTE-BINDING PROTEIN 2 HOMOLOG A-LIKE	coord: 3..130
IPR010666	Zinc finger, GRF-type	PFAM	PF06839	zf-GRF	coord: 13..53 e-value: 6.1E-11 score: 42.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G006530.1	ClCG02G006530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding