ClCG02G005970 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G005970
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Cold regulated protein 27, putative isoform 2
Location	CG_Chr02: 6607168 .. 6614995 (-)
RNA-Seq Expression	ClCG02G005970
Synteny	ClCG02G005970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTCCTCCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGTAAATTCTGACTCTCTCTTTCTTGGTAGTCTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTTTTTTTTCCTCGGTATGAACGAGTTTTTTGTGGATTGTACTTTGTTTTTTTGTTTTGCCCTCTTTTGAACGTTTCACTAGGAGATTTTGTGACCTATTTTTTGGCCTCTCGAAACTTATATGTCTGATTATGAGTGATTCTGTTGCTTTTGTGGTGCTTTTAGGAATTTTTAATGGTAAATTGGTTTTTGGGTACCTCCCATTTGGGGTTATTTTAAATCTGTAAGACAGGGGGGGTACATATGTACTTGTTTATAACTGCAGTTTTTGTGTCATCTCTTTACCATTTTTCTGTTTTCCCCCTTTTCTTGAATGGCCGTGGAGAAGAAATTCTTTTGCAATGCTTGATTTATTATTTATCTTTTCCATTTGTATTAGTGTTTAGTGTTAGGGCTTATTCAAGATAATTCATGGACGAATTTTGAATTAATTAGGTCCCAATCGTTAACCATTTGGTTTTTAGTGTTTCAAAGTTAAGCTTTGTTTTTCTACTTTTTACCAATATTTTAAAAAACCAAGCCAAATTATTGAATGTGGAATGGTTTCGTTAAATTATCGATCAAAGTCAGTCATGTCTTCCAAATTTTGTGTTAATGGATACCGGTTTCTCAATTGAATACTTGTGAACAGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGGTGAGGCAACACATCCATAGCAAGAGTGGGAGTGAGTTCCCTATCTCATTCCTCTACCTTCTTAATGATTTTTTCTTGTTATATTTTTTTTTAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATCATTACAGGTAATTTTGATTGATGTCATATGTTCTTGAAAGTTTCTCTTTCTATGACTTATATCTTTTTTATGTTGTTGGCTCTTTATGTACTCTTTTCTGTTGTTTGAGTAGTACATCTTCTACCCCTCAAGCTCCTCTCATAGTGACACACCTGAACACACCGTTCATGTTTTCCAAACCCCTTACTGGAGAAAGTTCTCCAGTCACTTTTTGTTGATTCTACCTTCTCTAATATGCTTAAAATTTGTAATCTCTATCCTCATTATGCATATACACTTCATATTTTGTTGTTGGGAACTGTGATCTTCCAATCATATTTTGTAATGGTGAAGATGTTTGCAAAAATTACTTTAGTAGTAGTATTCTAGCACCATTTAGATGCACTCACTTTTCTGATTTAATTTTGTGTTGGTGTACCAATATGATCATTACTATGTGATATTCCCACTAGTTGTTCCCACTAGTTTGCCACACCACATTGCCCGCACCACTTAAAGTTCTGCAAATCTTCTTTCCAATATTATCACGTGTTTGTTTGATATTTTGATCACATGTATGGCTTGAGCATGTGAGTTGTAAAATTTGTACGTCAAGCATAGGATATTGTGTTATCTTCTTAGCAATGGAAAATCTATATTTTCTAGTATATTAATCAGATAGTTTCCACATAGTTTTCAGTGTTGTGATAGCTTTTTTCCCATAACATGATTTTTAGTGTTTATGCCAGGGTTATGAGATCTAACGTCACAATTCTTCATGCTATTTCACAATTAAGAATTCATGGATTAACTGATTGCATAACTTTTCTATTTGAAGTTGTTTGATGTGTATTTATAAGTGAAAAAGTAGAAGTCCTTTATTTAAAGTTAGATGAGCACTTTTTGTACATTGTATTAGTGGAAAAAACAAATAAAAACTAAGTAGACCTGACTAGGATGGACTGCATTCTGGATATTGATGAACTACTAGATGAAGCCAGGCTGATGGTACTAATTCTAGGACAGTAGCTGTTTAGGAATGAATCAAAGCTTTTGGGATGACAACATTTTTGGTCAAATTGGAGGAGCCATGAAGCATAAAGAATTAGCCTTCTTAATGAATGAAAATGATTCTGATAGAAAGAGCTACTTCGATATTGGAGTTGAAGGAAGAGAAAAGAGCAGTTATGGTTGTGGCGACACTCTAATGTGTCTTAATTTAAGAAATTCTCATAAAGATCTTTATTTCTACTTTGAATGGTTATAAACATTCCTGTAGAATTGAGAACCTGTTGAAGAATAGTTTTCTTGTTATGGGTCAAATAAACGACATAATAATTTAAATCTTTGTGCATAAGGAGACTTAAAGCTTACCTCTTAGCTTCTACAAAGCTGAACGATTCCTAGATTCATAATTCAGCAAGAAATAACAAATAGCTGTTTCTTAATGGGTACAATCCTGTTTGTCTAATTAAAGGATCAAATATCTAGGCCGAGATGCCAAATGGCAAATTCTTCCCATTTCATTTAAGGTGCATGCTACCGTACTCCCTGTTAAAGAAGTCTCCCTAACATAGTTACCTTGAAGTTTAAAATATATCTATTTTTTGAAATGGAAACGGAACTTTTCATTGATACAATGAAGAAAAATAGCTCAATTACAAAGAAACAAAATATCCAAAAAAGTAAATGAATTTAAAATATATCGATTTAATAAGATTCATCATTAGGAAGTTATTGATGCTACAAACGTTATTAATGCCATCTAAAACTTTTATCTCCTGTCGTCATACTAACCTGGAGTCTTTTATCTCTTCATTTTGTCTTCTAATGCAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGGTTAATCTCCAGATTACCTTTTGATTTCACTTTGGAAAACTTATAATTGCATCGTATGAGTGATCTGAAACCGAATATGCTGCTGGTTGATCTCTTAGGTTGTACCATCTAAAAGATTATCAGAAAGATAAAACCCAGACACCATATTGTCTTCAGAACAAAGATTGCCAGAGGCCATATTGTCTTCAGAACATCCTCAAAGTCAAAACTTGTGCGTCCAAATTCAGATTTGTGTTACTGTGTGAGAGGGAGCTGACAACAATTCATTTCAACAGGTGAAAATACCTGGCTGTTCAAGGTATTTTTGAAAGAGCATGGTTTTATACCATACCGATTTAATACGACATGGTTCTCTTTCCTTTTTGAAAGAGCATTGTAAAGAAAATAAGGGAATTGACAGGTAATAATTCTACCAGAAGATTTGCGGCAGGAAGGAGAAAATATGTTTGTGTATGGTACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTGAAATATATGTTAATCCTTTCTTTTCCCCTGTTTTCCTTTTTCTTAGAGTTTGAAAAGATGGAAATTCTACTAGATGTAGGGCATGAATATACATGTTATAGAGAAGCTAGACAACACCCTGATAGTGAGATAGATACACACCCTTTTTTTATTTGTTTGCACTTCTCTCATTTTGAAGTTCTCAAGTGTAAATCATTACATAAAGCAAAGTGTCACGCTTTTGTGACGCTGAAAGAGAATTGAACAAGTTTATTGATTTTCTTTAGCGGGTAAAGTTTTTTCATTGTATTGTATCCTGGCGTTTTCACAATTATTTGATATTTGTACTTGTGTTGGTAGCAATTGTAATTTTTACTGCAACTTAGCTTCAGCTAGAGCTATTGTTCTCACTCTGCTGCTAGGTGGCAACATTTGTGTTCAAAGGATTTTGAGGACAAAGTTAGATAATGAAATAGTAGAGCTTTTCTCTTGTTTATGTTATGGAGTGCATCTCAGATGGTTGATGACAATTTACTTACGTTAAGTGCTTGATTAATGTGTGATTTTATTCCACCAAGTAAAACTCTCGATAAACAATTTTGTTAAGCAATTGGAAGAGTGCGTGAGTATTTGTTAGTGCTATGTTTGTTTGGATCCCTTTTTTTGCCTTTTTTGTGGGCTAACTTTGGCCTCTTTTCCTAGAAACCAAGTTCTTTTGAATCTATGGTGAAATTGATAGTAGTTTTAGTATTTTAGGGTGGCATAAAACCATCCTCTAGTTTTAGCATTTGTGGAGTAATGTTGGTGCCAAATTTTAAGGTGACAGAATTGAGGCGAACTTTTTGACTAGAGGATGGTTTAGTTCTGCTTTCAGTGACACATTCTAAGGAAATCACTGGATGAGGTGGTAGTCACCAAAAGGTGATGGTGCACGATCATATTTGATCGGTCAATGGAAGGAAGGGCTGGGTGTTCTATTGAGTCGTTATTGACTTTCTTCTAGATCATGTGACATGGCTGATGCAGGGGTATCCATTCAACTAAGGATGGTGCATCAGGGGGTCCTAAGATTTCTTCTTGGGAACTTCTTTTTGAGAAGCTTGCTACCTTCATTCTTGTTAGTTTACTCTCCATTGTGGAGATGGATGTGGTGATTCCAATTTGATGGTATTATTAATAAGAGCATTAGTTTATGGCAATGCTCTGTTGTGGGCCAATTCATTGATGGTTGATGAGTAATATTTGGGAAAGAAATGAGGTGGCGACTATTACTCTATTGGACGATGGTTCGGTCACCTTTTCGTTTCGTGGTACTCAATCTACTGATTGGGGGCTAATCGACCCTCTCATATTGGAGGTGAGCTGCCTATATATCAACAGCTTGGTTCGATAACTATTGGTTTTTTCAATTAAAAATTGAACCGAACCCATTTTTTTTTTGTTGTCTCCAAATAGCTGGGGTTGGTTCGGTTTTTTGGCTTTTTGTTGTACTCCTACTTGGAAGCCTAAGCGATGCTTTTATTGTTGTGTTTTTGGAATTTAATGTGTCTTAGTTTTATTCGTCAGCAACCAAATAAAGCTCTCAATAAAGCTCAAAGTACGCATTCCCTTCTTCAACAAGTTTAGATTCTTTTGAATGCTCAAATTTCTTCTCTTCCTTTTTGATGAGGTTTAAATTCTTTTGTTCATTTATTGCCTCTTTGACCGGGTGCTTTTGCGATGCTCCTTGGGTCTCTTTTTTCCCCCTCTAGTTTGTTAGGTAATCGTTTTGTTGCCCCTTTCCATGGGGATAAAGTTTGTAATCCTTCATCTATGACGTTGCTTTTAGTCTCTAATTAGACCCCTACTTCAATAGTTGACTCTAAGATTGACGGTTAGGGTCGTTGTTCACGATGAACCAATTGTGCACTCCAATAAATAGTTGTGTAGTGTTTTTTTATAGGTATGA

mRNA sequence

CGTAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTCCTCCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGGTATGA

Coding sequence (CDS)

CGTAGCGCCCATGTGGAGCCTTTTTATTTGGGTTTCGCCCCCAAAAAGAACACACCACCATTCACCTCTTCTCTCTCTCTTCCTCTTCATTTCTCCACGAGCCTCAATCCCCAGAGGGTTTCGGACCTAAATTTTCTCCCACCATTTCCAGTTCCATTTCCTCCTCCTATTTTTGGTTCTTTCGATCGATTTCCCCTTGTTTTTCATCCCTCCGTAATGGCTGACTCTCATACGCCGTCCTCCATCTCGCCGCCGCCGCTTACAGATCGACGGCAATCACTCATGCCGCCCTCTGCTGCCGACTCCACTCGCTTCAACTCTCAATCCGACTCTTCTTCCATAACTGTTGATGGGTCCAATCGTTTTTGGCATTTTAATCATTCTCTGCAACTCGATGCGGAGCAAACACATTGGACAGATGAGAAACACAGATTATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGCAGGGATGCTTTGTCGACAAAACAGAAAATTCGTCGGAAGCCAATCATGCCTAATATAACTTCTTCAGAGTTGATGATCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATTACACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCGTTTTCCTTCTGCAGGAAAACAATGTACTCTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAATTGTAGTCATAGGAGACGCATAAGAAACACAACGAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGATTCCTCCATGCTGCCATGATTCTAATACAATCATTACAGAAGTTTCAGATCAAAACTTTGTGGATGATTGTCCAGGGGAGTTGTCTGGTGCCATGCCTATTGCAAAAAGATTAAGAAAAGCTTCTTCTGATTCTTCGGGCAATGACCAGGTATGA

Protein sequence

RSAHVEPFYLGFAPKKNTPPFTSSLSLPLHFSTSLNPQRVSDLNFLPPFPVPFPPPIFGSFDRFPLVFHPSVMADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSGNDQV

Homology

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BLAST of ClCG02G005970 vs. NCBI nr
Match: XP_038887003.1 (cold-regulated protein 27 isoform X1 [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 2.3e-109
Identity = 206/246 (83.74%), Postives = 219/246 (89.02%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLD 132
           M  SHT SSISPPPL DRRQSLMPPSA+DSTR  SQS SSSIT+DGSN F + +HSLQLD
Sbjct: 1   MGHSHTQSSISPPPLPDRRQSLMPPSASDSTRSISQSVSSSITLDGSNPFLYSHHSLQLD 60

Query: 133 AEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMILQD 192
           AEQTHWTDEKHRLYLDSLEASFVQGLHQHRRR ALS +QK+  KP MPNI+SSELMILQD
Sbjct: 61  AEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPNISSSELMILQD 120

Query: 193 ASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRI 252
           ASWQKANIGRNDP LD TADSPAILEDLWINRFPSAGKQCT E PD+LEECG+CS RR +
Sbjct: 121 ASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRRHL 180

Query: 253 RNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDS 312
           RNT+NSCGSARSSQQIPPCC DSN IITEVSDQNFVDD P ELSG +PIAKRL+K SSDS
Sbjct: 181 RNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSSDS 240

Query: 313 SGNDQV 319
           SGNDQV
Sbjct: 241 SGNDQV 246

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BLAST of ClCG02G005970 vs. NCBI nr
Match: XP_008454952.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.0e-96
Identity = 193/248 (77.82%), Postives = 208/248 (83.87%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 132
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 133 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMIL 192
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+KQK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 193 QDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRR 252
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 253 RIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASS 312
            IR+ TNSCGSAR+SQQ  PCC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 313 DSSGNDQV 319
               N QV
Sbjct: 241 GFLDNAQV 246

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BLAST of ClCG02G005970 vs. NCBI nr
Match: KAA0031301.1 (Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK06753.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 362.5 bits (929), Expect = 3.8e-96
Identity = 192/247 (77.73%), Postives = 207/247 (83.81%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 132
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 133 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMIL 192
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+KQK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 193 QDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRR 252
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 253 RIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASS 312
            IR+ TNSCGSAR+SQQ  PCC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 313 DSSGNDQ 318
               N Q
Sbjct: 241 GFLDNAQ 245

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BLAST of ClCG02G005970 vs. NCBI nr
Match: XP_004136978.1 (cold-regulated protein 27 isoform X1 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 6.8e-93
Identity = 188/248 (75.81%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 132
           M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  Q
Sbjct: 1   MGDSHTPSFLS-PPLAD-RQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQ 60

Query: 133 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMIL 192
           LDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS KQK+RRKPI P+I+SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMVL 120

Query: 193 QDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRR 252
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CS RR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRR 180

Query: 253 RIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASS 312
            IR  TNSC SAR+SQ   PCC +S TIITEVSDQNFVD+ PGELS  MPIAKRL+KASS
Sbjct: 181 HIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASS 240

Query: 313 DSSGNDQV 319
           D S + QV
Sbjct: 241 DFSDSAQV 246

[Close]

BLAST of ClCG02G005970 vs. NCBI nr
Match: XP_022952080.1 (uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata])

HSP 1 Score: 335.9 bits (860), Expect = 3.8e-88
Identity = 177/249 (71.08%), Postives = 200/249 (80.32%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSL 132
           M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  
Sbjct: 1   MVDAHTPSSMSPP--VADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 133 QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMI 192
           QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+KQK+RRKPIMPNI+SSE M+
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 193 LQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHR 252
           LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 253 RRIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKAS 312
             IRN TNS  SARSSQQIPPCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 313 SDSSGNDQV 319
           SDSSGN++V
Sbjct: 241 SDSSGNNRV 247

[Close]

BLAST of ClCG02G005970 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-09
Identity = 68/232 (29.31%), Postives = 107/232 (46.12%), Query Frame = 0


Query: 102 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 161
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 162 HQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD--YT 221
           +            + ST+    RKP     +  +  +L D  WQK N+ + +  ++  + 
Sbjct: 71  YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGRHG 130

Query: 222 ADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP 281
            +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+  
Sbjct: 131 GNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQLSS 190

Query: 282 CCHDSNTII---TEVSDQNFVDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV 319
              D + I     EVSDQNFV++    + G    +K+++    S+SS  DQV
Sbjct: 191 HSRDHDQISVGEAEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 229

[Close]

BLAST of ClCG02G005970 vs. ExPASy Swiss-Prot
Match: Q8L983 (Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.5e-05
Identity = 69/235 (29.36%), Postives = 97/235 (41.28%), Query Frame = 0


Query: 98  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQG 157
           S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ 
Sbjct: 25  SQSESTLSNSL--DSGVTAETSRS----DADSKLD-ECTAWTNEKHNSYLDYLESSFVRQ 84

Query: 158 LHQ---------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD 217
           L+           R RD  S   K          ++ +  +LQ+  WQK N G+      
Sbjct: 85  LYSLLGGGTQRLSRTRDVQSNSHK----------SADQFTVLQNGCWQKVNFGK------ 144

Query: 218 YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSS 277
                                KQ  LET           HR  +RN    +N   +  ++
Sbjct: 145 ---------------------KQSCLETSSEFR-----FHRNSLRNKPENSNGNYTMGTT 204

Query: 278 QQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV 319
            Q    CHD  T  +E S QNF ++   E  G +   KR R+A++D S    DQV
Sbjct: 205 VQGDVLCHD-ETKHSEASGQNFREEEEEEEKGEVS-KKREREANNDDSSLKEDQV 208

[Close]

BLAST of ClCG02G005970 vs. ExPASy TrEMBL
Match: A0A1S3BZU8 (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.9e-97
Identity = 193/248 (77.82%), Postives = 208/248 (83.87%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 132
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 133 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMIL 192
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+KQK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 193 QDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRR 252
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 253 RIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASS 312
            IR+ TNSCGSAR+SQQ  PCC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 313 DSSGNDQV 319
               N QV
Sbjct: 241 GFLDNAQV 246

[Close]

BLAST of ClCG02G005970 vs. ExPASy TrEMBL
Match: A0A5D3C4A3 (Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00540 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.9e-96
Identity = 192/247 (77.73%), Postives = 207/247 (83.81%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPP--SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 132
           M DSHTPS +S  PL D RQS MPP  S  DST FNS+S SSSITVDGS RF   +H LQ
Sbjct: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60

Query: 133 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMIL 192
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR  ALS+KQK+RRKPIM + +SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120

Query: 193 QDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRR 252
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEECG+CS RR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180

Query: 253 RIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASS 312
            IR+ TNSCGSAR+SQQ  PCC +S TIITEVSDQNFVD+ PGELSG MP AKRL+KASS
Sbjct: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASS 240

Query: 313 DSSGNDQ 318
               N Q
Sbjct: 241 GFLDNAQ 245

[Close]

BLAST of ClCG02G005970 vs. ExPASy TrEMBL
Match: A0A0A0K7Z2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 3.3e-93
Identity = 188/248 (75.81%), Postives = 206/248 (83.06%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPPSAA--DSTRFNSQSDSSSITVDGSNRFWHFNHSLQ 132
           M DSHTPS +S PPL D RQS MP ++A  DST FNS+S SSSIT+DGS  F+  +H  Q
Sbjct: 1   MGDSHTPSFLS-PPLAD-RQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQ 60

Query: 133 LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMIL 192
           LDAEQTHWTDEKHRLYLDSLEASFVQ LHQHR   ALS KQK+RRKPI P+I+SSELM+L
Sbjct: 61  LDAEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMVL 120

Query: 193 QDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRR 252
           QDASWQKANIGRNDPLLD TADSPAILEDLWIN FPSAGKQC+LETPDLLEEC +CS RR
Sbjct: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRR 180

Query: 253 RIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASS 312
            IR  TNSC SAR+SQ   PCC +S TIITEVSDQNFVD+ PGELS  MPIAKRL+KASS
Sbjct: 181 HIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASS 240

Query: 313 DSSGNDQV 319
           D S + QV
Sbjct: 241 DFSDSAQV 246

[Close]

BLAST of ClCG02G005970 vs. ExPASy TrEMBL
Match: A0A6J1GKR5 (uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.9e-88
Identity = 177/249 (71.08%), Postives = 200/249 (80.32%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSL 132
           M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  
Sbjct: 1   MVDAHTPSSMSPP--VADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 133 QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMI 192
           QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+KQK+RRKPIMPNI+SSE M+
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 193 LQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHR 252
           LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 253 RRIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKAS 312
             IRN TNS  SARSSQQIPPCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 313 SDSSGNDQV 319
           SDSSGN++V
Sbjct: 241 SDSSGNNRV 247

[Close]

BLAST of ClCG02G005970 vs. ExPASy TrEMBL
Match: A0A6J1GJA3 (uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.9e-88
Identity = 177/249 (71.08%), Postives = 200/249 (80.32%), Query Frame = 0


Query: 73  MADSHTPSSISPPPLTDRRQSLMPPSAADSTRFNSQSDSSSITVDGSN---RFWHFNHSL 132
           M D+HTPSS+SPP     R+S M  SA+D TR NS+S SSS TVD S         +H  
Sbjct: 1   MVDAHTPSSMSPP--VADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 133 QLDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRDALSTKQKIRRKPIMPNITSSELMI 192
           QLDA QTHWT+EKHRL+LDSLEASFVQ LH++R   ALS+KQK+RRKPIMPNI+SSE M+
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 193 LQDASWQKANIGRNDPLLDYTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHR 252
           LQDASWQKAN+GR DPLLD TADSPAILED+WIN FPSAG QCTLET D+LEECG+CS R
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 253 RRIRNTTNSCGSARSSQQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKAS 312
             IRN TNS  SARSSQQIPPCC DS+TI+TEVSDQNFVD  PGELS   PI KRL+KAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 313 SDSSGNDQV 319
           SDSSGN++V
Sbjct: 241 SDSSGNNRV 247

[Close]

BLAST of ClCG02G005970 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 65.9 bits (159), Expect = 6.9e-11
Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 0


Query: 102 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 161
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 162 HQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD--YT 221
           +            + ST+    RKP     +  +  +L D  WQK N+ + +  ++  + 
Sbjct: 71  YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGRHG 130

Query: 222 ADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP 281
            +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+  
Sbjct: 131 GNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQLSS 190

Query: 282 CC--HDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV 319
               HD  ++  EVSDQNFV++    + G    +K+++    S+SS  DQV
Sbjct: 191 HSRDHDQISVGEEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 228

[Close]

BLAST of ClCG02G005970 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 68/232 (29.31%), Postives = 107/232 (46.12%), Query Frame = 0


Query: 102 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 161
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 162 HQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD--YT 221
           +            + ST+    RKP     +  +  +L D  WQK N+ + +  ++  + 
Sbjct: 71  YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGRHG 130

Query: 222 ADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP 281
            +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+  
Sbjct: 131 GNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQLSS 190

Query: 282 CCHDSNTII---TEVSDQNFVDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV 319
              D + I     EVSDQNFV++    + G    +K+++    S+SS  DQV
Sbjct: 191 HSRDHDQISVGEAEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 229

[Close]

BLAST of ClCG02G005970 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-10
Identity = 68/232 (29.31%), Postives = 107/232 (46.12%), Query Frame = 0


Query: 102 STRFNSQSDSSS---ITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQGL 161
           S RF+  SD SS    +V+G        +S   +  +T WT+EKH LYL S+EASFV  L
Sbjct: 11  SRRFSDDSDDSSDDASSVEGETT--SSMYSAGKEYMETEWTNEKHSLYLKSMEASFVDQL 70

Query: 162 HQ------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD--YT 221
           +            + ST+    RKP     +  +  +L D  WQK N+ + +  ++  + 
Sbjct: 71  YNSLGALGKNENVSESTRFGSGRKP-----SQEQFKVLHDGFWQKINVKQPEHRINGRHG 130

Query: 222 ADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRNTTNSCGSARSSQQIPP 281
            +S   L   WI  +    K     T +   +  + S+ ++      S GSA S +Q+  
Sbjct: 131 GNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVVSSSNGKK---GICSSGSASSLKQLSS 190

Query: 282 CCHDSNTII---TEVSDQNFVDDCPGELSGAMPIAKRLRKA-SSDSSGNDQV 319
              D + I     EVSDQNFV++    + G    +K+++    S+SS  DQV
Sbjct: 191 HSRDHDQISVGEAEVSDQNFVNE---GIKGENGSSKKMKTVMMSESSSTDQV 229

[Close]

BLAST of ClCG02G005970 vs. TAIR 10
Match: AT4G33980.1 (BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-06
Identity = 69/235 (29.36%), Postives = 97/235 (41.28%), Query Frame = 0


Query: 98  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQG 157
           S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ 
Sbjct: 25  SQSESTLSNSL--DSGVTAETSRS----DADSKLD-ECTAWTNEKHNSYLDYLESSFVRQ 84

Query: 158 LHQ---------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD 217
           L+           R RD  S   K          ++ +  +LQ+  WQK N G+      
Sbjct: 85  LYSLLGGGTQRLSRTRDVQSNSHK----------SADQFTVLQNGCWQKVNFGK------ 144

Query: 218 YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSS 277
                                KQ  LET           HR  +RN    +N   +  ++
Sbjct: 145 ---------------------KQSCLETSSEFR-----FHRNSLRNKPENSNGNYTMGTT 204

Query: 278 QQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV 319
            Q    CHD  T  +E S QNF ++   E  G +   KR R+A++D S    DQV
Sbjct: 205 VQGDVLCHD-ETKHSEASGQNFREEEEEEEKGEVS-KKREREANNDDSSLKEDQV 208

[Close]

BLAST of ClCG02G005970 vs. TAIR 10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.3). )

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-06
Identity = 69/235 (29.36%), Postives = 97/235 (41.28%), Query Frame = 0


Query: 98  SAADSTRFNSQSDSSSITVDGSNRFWHFNHSLQLDAEQTHWTDEKHRLYLDSLEASFVQG 157
           S ++ST  NS    S +T + S      +   +LD E T WT+EKH  YLD LE+SFV+ 
Sbjct: 25  SQSESTLSNSL--DSGVTAETSRS----DADSKLD-ECTAWTNEKHNSYLDYLESSFVRQ 84

Query: 158 LHQ---------HRRRDALSTKQKIRRKPIMPNITSSELMILQDASWQKANIGRNDPLLD 217
           L+           R RD  S   K          ++ +  +LQ+  WQK N G+      
Sbjct: 85  LYSLLGGGTQRLSRTRDVQSNSHK----------SADQFTVLQNGCWQKVNFGK------ 144

Query: 218 YTADSPAILEDLWINRFPSAGKQCTLETPDLLEECGNCSHRRRIRN---TTNSCGSARSS 277
                                KQ  LET           HR  +RN    +N   +  ++
Sbjct: 145 ---------------------KQSCLETSSEFR-----FHRNSLRNKPENSNGNYTMGTT 204

Query: 278 QQIPPCCHDSNTIITEVSDQNFVDDCPGELSGAMPIAKRLRKASSDSSG--NDQV 319
            Q    CHD  T  +E S QNF ++   E  G +   KR R+A++D S    DQV
Sbjct: 205 VQGDVLCHD-ETKHSEASGQNFREEEEEEEKGEVS-KKREREANNDDSSLKEDQV 208

The following BLAST results are available for this feature:

BLAST of ClCG02G005970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887003.1	2.3e-109	83.74	cold-regulated protein 27 isoform X1 [Benincasa hispida]	[more]
XP_008454952.1	1.0e-96	77.82	PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]	[more]
KAA0031301.1	3.8e-96	77.73	Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK067...	[more]
XP_004136978.1	6.8e-93	75.81	cold-regulated protein 27 isoform X1 [Cucumis sativus]	[more]
XP_022952080.1	3.8e-88	71.08	uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]	[more]

BLAST of ClCG02G005970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	2.8e-09	29.31	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]
Q8L983	1.5e-05	29.36	Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1	[more]

BLAST of ClCG02G005970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZU8	4.9e-97	77.82	uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C4A3	1.9e-96	77.73	Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0K7Z2	3.3e-93	75.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1	[more]
A0A6J1GKR5	1.9e-88	71.08	uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GJA3	1.9e-88	71.08	uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of ClCG02G005970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.3	6.9e-11	29.44	cold regulated gene 27	[more]
AT5G42900.1	2.0e-10	29.31	cold regulated gene 27	[more]
AT5G42900.2	2.0e-10	29.31	cold regulated gene 27	[more]
AT4G33980.1	1.0e-06	29.36	BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G429...	[more]
AT4G33980.2	1.0e-06	29.36	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	PANTHER	PTHR33676:SF17	REGULATED GENE 27, PUTATIVE ISOFORM 2-RELATED	coord: 91..318
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 91..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G005970.1	ClCG02G005970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold