ClCG02G005510 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G005510
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	diphthamide biosynthesis protein 3-like
Location	CG_Chr02: 6026966 .. 6029640 (+)
RNA-Seq Expression	ClCG02G005510
Synteny	ClCG02G005510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTACGACGACGTAGAGATTGAAGACATGGAGTGGAACGAGGAACTGCAGGCCTTCACATACCCATGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACGGTCATCTACAACATGGAAGATTTTCTTGGAGACTCTAATCAGAAGAATAACAAAGGAATTGAGCCCCCTAAACAACAGCCTATCGTGGTCGCTTAACAATTCAGGTTATTAACCGATCGAAACTTCGAATTTGTTTATTATCACCGGAATGTTCGTATGCAATCATTTTTTTCCTTTTTTTTTTTGTTTTTTTTAACATGCTCTCGTTAGTTCCTTTTAGGTTACCTTGTTCCTACTTCCGTATTTACTATTCGCTGTGTGGATGGGAGAACAGTGGAGTCTGAATCTGGAATTTATTTGAATTTGGAATATCTTGCTTCCCCTCCATCCCTCAGGGGGATGGTTTCACTTCGTTAGTTATATAGCTTAGTTTCATATACGTAAGCAGTTTAGAACCCTGGGTAGGCCTAGCTTTAGCGTGATAAAATGTCCAATTGGGTTGTTTCCTCTTCCCTGTGATAAATTGTTCAGAGATAAGTTTGTGAAACTGAATACTCTTTCTGAAAGCATTAAGCTATTGTGTTTGTTTGTGCTCATCAAGTTTTAAAGGATTTACTATGTAAAGAAATCTTTTTGGTCATTGTTGATACACCATATTTAAGGCTTCAGTCTTTTACTCTCGGGTAAACTTCTCTGACTAGAAGGTAGAAAGATGAAGTAGCTCTGATTGAATCTAAACTGCACACAATAATATATGGTTAAATTATAAATTTGGTCCCTTGGAGAAAGTTAAAATTTAGTCCGTTTTAAAAGTTAAATTTTGGTCCTAGTGGTTTGCTCATAAATGGTCGTATGGTTTGATAACATACTCATAAATAATCCTTAGGGTAAGGACTACTATTTACGAAAGTTTTATCAAGAGGACTAAATTTTAACCTTCTCTAAATTTATAGGGACCAAATTTGCAATTTAACCTATATTTTATCCTAGAAGCGTGTTTAGTTTGTGGCCAATTGAGAACGGAGTAGACTCATTTGGATTGAGAGAAGAGAATAAGTTGCTATACCATACCCGTTAGGAGGAGGATTTCAATTGGTTAGTTCATTACGCCAGGGAGACCCTAGCTTTAGTGCAGAACTCTCTATTACCCCGTTCGAGATTAGCTAGAGAATGCTTATGCTGACGTGGATAACCTGCAACTATGTTCTTTTTTATGTTGTCTGCTGTATCATTTTTCTGAAGTTATGATTATATATGGAAAGGGTAGCCCTATGGACTACGTCCCTGCCCAACTGCCCAAACTCAAAAAAGGAAAAAAAGGATTGGTCATTGGGAAGCTCTGGCAGTTCGTTGAACATTTTTTCTTTTGGTAATTTGAATTTACCTCTATTTTCTGGGTTGTTTAGAGATGATTTCATGAATATGTATGTGAGTAATACACAGTTATGCTTGTTTTTGTCCGTCTAAGGGTATACCTTCTGAGGTCATCGTTTTGGTCATTGCTCATATACTGTATTTATATGCTTATTTTCTAACCAGAAAACTGTATTTTATTTATAGGTTTGTATTTTTTCATTCAAGTGAACTTCTCTGACTTTAAGATAGGAAAATAGAGGAAGTAGCTCTGTTTGAATCTAGACCCCACACCAGAATGTATCTAAATCTCCTCTGAGTTCTTGGTGTTTAGTTTGTGATTTGACTCTATTTCAATAGGGGGAATGACCTTGATAAAGGGTAAGAGGTCTCATGGGTTCAATTCATGGTGACCACTTATCTATCTAGTTTTCTTGACACCTAAATGTTGTAAAGTCAAGTGAGTTGCCACGAAAAAGAAGGTGGAATTTGTCATCAGTACAAGTCTCTTTTAACTTTGTGGCATAAGTGTGTTATATGGCACATGGATTCTCTAAACTCTATCAATACATGGTTGGAATAGTCTTTTAATATCTTTAGTTTCTCCTTCAAAAATAAAAAAATAAAAAAGATCTTCTATTTTGTTAGTTTTATATAGATGTTCCTTTTTGCAGAACCCCCAAATGTGAATCATGGTGTCACCACGGCAGCTGCACTTGTTGCAGATGAAATTTTGTCAGCCATTGTCAATTCTGAGATGTTCGTTGGCATTAAAGTTTCTTCCTTTTCTTTTCATTTCTTTTTTCAGAATTGCTCTTGGAAATAGAGGAAGGTAGAGTTGCTTCCGGAAAAATGTAGTGAAGTACTATTTTTGTTCCTTGATGAAGTAATTTATAGAATCTTGATCTTTTCACAATCTAATGTAATGAGTGGTGATTTCTTTGGTCGAATCTATCTTCGTCTTTATGACATAAAATGGATGAAAACCTCTACTAATCTAATCAATCTATGCTTTTTTTTTTCTTTTACAAACACTTTTTTAAACATTTATAAAGTAAATCCAAACATGTTCTTAATCAGTTGCTGATTTTCAGCTCTTCTCGTTGGTTTATGGAAATTTCAGGATAATGATTTGTTTTATTGACCCTTTTGCATATTAGGTTGATTGTATTATGGATCGGGAAATGGTGAAACCCATTTTGCAAATGCTTATTAGCTAG

mRNA sequence

ATGTCGTACGACGACGTAGAGATTGAAGACATGGAGTGGAACGAGGAACTGCAGGCCTTCACATACCCATGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACGGTCATCTACAACATGGAAGATTTTCTTGGAGACTCTAATCAGAAGAATAACAAAGGAATTGAGCCCCCTAAACAACAGCCTATCGTGGGAGACCCTAGCTTTAGTGCAGAACTCTCTATTACCCCGGTAGCCCTATGGACTACGTCCCTGCCCAACTGCCCAAACTCAAAAAAGGAAAAAAAGGATTGGTCATTGGGAAGCTCTGGCAGTTCGTTGAACATTTTTTCTTTTGGTAATTTGAATTTACCTCTATTTTCTGGGTTGTTTAGAGATGATTTCATGAATATGTTTGTATTTTTTCATTCAAAACCCCCAAATGTGAATCATGGTGTCACCACGGCAGCTGCACTTGTTGCAGATGAAATTTTGTCAGCCATTGTCAATTCTGAGATGTTCGTTGGCATTAAAGTTGATTGTATTATGGATCGGGAAATGGTGAAACCCATTTTGCAAATGCTTATTAGCTAG

Coding sequence (CDS)

ATGTCGTACGACGACGTAGAGATTGAAGACATGGAGTGGAACGAGGAACTGCAGGCCTTCACATACCCATGCCCCTGCGGCGACTTGTTCCAGATCACCAAGGAGGATCTTAAGCTCGGCGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACGGTCATCTACAACATGGAAGATTTTCTTGGAGACTCTAATCAGAAGAATAACAAAGGAATTGAGCCCCCTAAACAACAGCCTATCGTGGGAGACCCTAGCTTTAGTGCAGAACTCTCTATTACCCCGGTAGCCCTATGGACTACGTCCCTGCCCAACTGCCCAAACTCAAAAAAGGAAAAAAAGGATTGGTCATTGGGAAGCTCTGGCAGTTCGTTGAACATTTTTTCTTTTGGTAATTTGAATTTACCTCTATTTTCTGGGTTGTTTAGAGATGATTTCATGAATATGTTTGTATTTTTTCATTCAAAACCCCCAAATGTGAATCATGGTGTCACCACGGCAGCTGCACTTGTTGCAGATGAAATTTTGTCAGCCATTGTCAATTCTGAGATGTTCGTTGGCATTAAAGTTGATTGTATTATGGATCGGGAAATGGTGAAACCCATTTTGCAAATGCTTATTAGCTAG

Protein sequence

MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDFLGDSNQKNNKGIEPPKQQPIVGDPSFSAELSITPVALWTTSLPNCPNSKKEKKDWSLGSSGSSLNIFSFGNLNLPLFSGLFRDDFMNMFVFFHSKPPNVNHGVTTAAALVADEILSAIVNSEMFVGIKVDCIMDREMVKPILQMLIS

Homology

[Close]

BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_038887330.1 (diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diphthamide biosynthesis protein 3-like [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-41
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDSNQKNNKG+EP KQQPIV
Sbjct: 61 DFLGDSNQKNNKGLEPSKQQPIV 83

[Close]

BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_022972367.1 (diphthamide biosynthesis protein 3-like [Cucurbita maxima])

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-39
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+ KNNKG++P KQQPIV
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIV 83

[Close]

BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_008454889.1 (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.1 PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >KAA0031262.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa] >TYK06714.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-39
Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL DSNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIV 83

[Close]

BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_022136247.1 (diphthamide biosynthesis protein 3-like [Momordica charantia])

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-39
Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+QKNNKGI+P KQQPIV
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIV 83

[Close]

BLAST of ClCG02G005510 vs. NCBI nr
Match: XP_004137002.1 (diphthamide biosynthesis protein 3 [Cucumis sativus] >KGN43974.1 hypothetical protein Csa_017712 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-38
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL  SNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIV 83

[Close]

BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q21102 (DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-17
Identity = 39/75 (52.00%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E++EE   + YPCPCGD F+I +E L++GE++A+CPSCSL I VIY+ EDF
Sbjct: 5  HDEVEIEDFEFDEEKDVYHYPCPCGDRFEIPREMLEMGEDVAQCPSCSLLIRVIYDPEDF 64

Query: 63 LGDSNQKNNKGIEPP 78
          +       +K I  P
Sbjct: 65 VKLETISTSKPIAEP 79

[Close]

BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q74Z32 (Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0


Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+Y + D 
Sbjct: 4  YDEVEIEDMTFDPDTQLFTYPCPCGDRFQISIDDMCDGEDIAVCPSCSLMIKVVYELHDL 63

Query: 63 LGDSNQKNNKGIEPP 78
                 +  G+EPP
Sbjct: 64 ---QEYYDEAGVEPP 75

[Close]

BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q9VGQ9 (DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED E++EE + + YPCPCGD FQI+KE+L  GEE+A CPSCSL I VIY+ E F
Sbjct: 5  HDEVEIEDFEYDEEEEMYYYPCPCGDRFQISKEELIEGEEVATCPSCSLVIKVIYDPEMF 64

Query: 63 LGDSNQKN 71
            + ++++
Sbjct: 65 KAEEDEES 72

[Close]

BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q6VUC1 (DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.0e-17
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED +++E+ + + YPCPCGD F ITKEDL+ GE++A CPSCSL I VIY+ + F
Sbjct: 5  HDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQF 64

Query: 63 L 64
          +
Sbjct: 65 M 65

[Close]

BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot
Match: Q96FX2 (DPH3 homolog OS=Homo sapiens OX=9606 GN=DPH3 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.2e-17
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 3  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDF 62
          +D+VEIED +++E+ + + YPCPCGD F ITKEDL+ GE++A CPSCSL I VIY+ + F
Sbjct: 5  HDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQF 64

Query: 63 L 64
          +
Sbjct: 65 V 65

[Close]

BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A6J1I4L9 (diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470942 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+ KNNKG++P KQQPIV
Sbjct: 61 DFLGDSDHKNNKGLQPSKQQPIV 83

[Close]

BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A1S3BZL5 (diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL DSNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIV 83

[Close]

BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A5A7SJN1 (Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00150 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMDWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL DSNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDDSNQKNNKGLEPSKQHPIV 83

[Close]

BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A6J1C519 (diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007992 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFLGDS+QKNNKGI+P KQQPIV
Sbjct: 61 DFLGDSDQKNNKGIQPSKQQPIV 83

[Close]

BLAST of ClCG02G005510 vs. ExPASy TrEMBL
Match: A0A0A0K4W9 (DPH-type MB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G075060 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWN+ELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNDELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPIV 84
          DFL  SNQKNNKG+EP KQ PIV
Sbjct: 61 DFLDHSNQKNNKGLEPSKQHPIV 83

[Close]

BLAST of ClCG02G005510 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEE+QA+TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPI 83
          DF  D+ +KNN   EP  + P+
Sbjct: 61 DFQNDT-KKNN---EPKTRHPV 78

[Close]

BLAST of ClCG02G005510 vs. TAIR 10
Match: AT2G15910.2 (CSL zinc finger domain-containing protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 65/82 (79.27%), Postives = 72/82 (87.80%), Query Frame = 0


Query: 1  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNME 60
          MSYDDVEIEDMEWNEE+QA+TYPCPCGDLFQITKEDL+LGEEIA CPSCSLYITVIYNME
Sbjct: 1  MSYDDVEIEDMEWNEEIQAYTYPCPCGDLFQITKEDLRLGEEIANCPSCSLYITVIYNME 60

Query: 61 DFLGDSNQKNNKGIEPPKQQPI 83
          DF  D+ +KNN   EP  + P+
Sbjct: 61 DFQNDT-KKNN---EPKTRHPV 78

The following BLAST results are available for this feature:

BLAST of ClCG02G005510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887330.1	6.7e-41	97.59	diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diph...	[more]
XP_022972367.1	2.2e-39	93.98	diphthamide biosynthesis protein 3-like [Cucurbita maxima]	[more]
XP_008454889.1	3.7e-39	93.98	PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890....	[more]
XP_022136247.1	3.7e-39	92.77	diphthamide biosynthesis protein 3-like [Momordica charantia]	[more]
XP_004137002.1	2.4e-38	92.77	diphthamide biosynthesis protein 3 [Cucumis sativus] >KGN43974.1 hypothetical pr...	[more]

BLAST of ClCG02G005510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q21102	2.4e-17	52.00	DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1	[more]
Q74Z32	4.1e-17	53.33	Diphthamide biosynthesis protein 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 1...	[more]
Q9VGQ9	4.1e-17	55.88	DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1	[more]
Q6VUC1	7.0e-17	57.38	DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1	[more]
Q96FX2	9.2e-17	57.38	DPH3 homolog OS=Homo sapiens OX=9606 GN=DPH3 PE=1 SV=1	[more]

BLAST of ClCG02G005510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4L9	1.0e-39	93.98	diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]
A0A1S3BZL5	1.8e-39	93.98	diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 ...	[more]
A0A5A7SJN1	1.8e-39	93.98	Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1C519	1.8e-39	92.77	diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0K4W9	1.2e-38	92.77	DPH-type MB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G075060...	[more]

BLAST of ClCG02G005510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15910.1	1.4e-33	79.27	CSL zinc finger domain-containing protein	[more]
AT2G15910.2	1.4e-33	79.27	CSL zinc finger domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036671	DPH-type metal-binding domain superfamily	GENE3D	3.10.660.10	DPH Zinc finger	coord: 1..81 e-value: 1.5E-28 score: 100.3
IPR036671	DPH-type metal-binding domain superfamily	SUPERFAMILY	144217	CSL zinc finger	coord: 2..72
IPR007872	DPH-type metal-binding domain	PFAM	PF05207	zf-CSL	coord: 4..58 e-value: 3.7E-21 score: 74.6
IPR007872	DPH-type metal-binding domain	PROSITE	PS51074	DPH_MB	coord: 2..58 score: 23.350922
None	No IPR available	PANTHER	PTHR21454:SF2	DPH3 HOMOLOG	coord: 2..72
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 2..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G005510.2	ClCG02G005510.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding