ClCG02G005320 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G005320
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	cytochrome c biogenesis protein CCS1, chloroplastic
Location	CG_Chr02: 5806128 .. 5811537 (+)
RNA-Seq Expression	ClCG02G005320
Synteny	ClCG02G005320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGATTTGCAATGACGATGGTGTTTGGAAGGGAGGTTGTGAGATGGGAACTTCATCGCGGGATCGAGCTCGAGAACAATTATCAATGAAGAAAGGTGAGGGTTCAATAGTATAATCGCGTTAGGTCGTATTTATTATCAAGGGTTTTTGGACATTTTGCACATGATTTTGCCATACTTGTAAATATTTTAGCTCATTTTGTTATATCTGTAACTAGCCCTTAAACTTATTTTAGTATAATTTTCCATTTCCAATTCTAAAGTGCAAGCCATTTTGTAGATGATCTCTACCCCCATAATAAACTATCTATCTAAAAGAAATCCTATTCATCACAAAAATTCAATCCAATGCATTAAGTCTAAGGAATTAGTTAAGTTGAATGTTTAATCAGAACGTTGAATTAAGCATTTGAATTGATTCTCCCCTAGGTTGATACATCAATGTTATTTGTTTTATACAAAAAAATTACAAGCCTAACTAATCTATTTGTACCTTTTAGAATGAATTGTAATTACATGTCACCTATCAAAACCAATCTCTAGCAACCGGTTACACAATTCCAATCAGTTTGTTTGACAATCGTGAAATCACACAACCAAGAGTCATACAAAAACAAAGAATAATCAAAGAATAGTAATAAGAATTATAACATTGGATCTAAAATCTCAAAAGTTCACAATTGCACGGAAAAATCGCTCTACACCTAAGCTAGAATGAGTACCTTAGCCAACAATGAACATCTAGATATTGTTTTGGTCATCAAAATACAAAAAGTGGAAGAAAAGAGAGGAAAATTGTCTTGAAGTGCGGCTGGAATCACAGGTAATTAACCTAGGCAGCCACATATTTCTTGTATGAAATCGTAATAGTGCTGTGATGCTCGATGGAAAAAGTCGTGCGTATCAGGTTTGGAGTGCCGCGATGCTTATTGTATTTCACCAAAAAGAAAAAAAGAAAACCCTCTAGAAAAACCACTGGGCTGGCACCTAGGCGGCGCCGTTGCACCGTGGCTTCAAAGGCAAAATGGTCATTTTGCTTATCTCTTCTCCAATTGATGTAATTAAACTCCATTTTGGCTCAGTTTCAGCTCTAACGCCTCATAAGTGCTCGAAACCTATAAAATAACTAAATAAATACATAAAGAGACAAGCTTGAATTTAAGGGGAACAAGATAACACGTTTTTGGTGCTACTACTATGCATTCTCTAAAGCCCATTTCATAGGCTTTTAGCATGTTCATCAAGTTAATCAATTCTTGTTTGTTTGCCCTACAAAAAAAATCAAATAGAAGGTGAGTAGAGTCACAAGGGCATTCAAAGATGAAGAGAAACTAGAAAGTGAATTTGAGATAGAAGTCACTTTAATAAGAGCAGAGAGTTCCTCAATGACTAGTAAAAAAAAAAGGTATGGAGAGAGATGATTTCCTTGACAGAGACCCCTACTAAGACTTAAAGAATCCTAAAAGGTTTAGAGTACAAAGTTAAAAGTATATTTTGAGTAATTTAGCCTATTTTTTATAATTCAACCATGATGATGGTGCGAAAAGATCTCTTCCCGAGGATAAAACCAACAGCAATGGTCGTTATTAACGCTCGCGAGGCAACAAAATGGAAACCCACTTCATAATTTCTGCAACAATGGAGGGTTTGATTCTTAACAATCCAAACCCATCTTTATCCAAACCCTTTCTTCTCAAAACCCCTTTTCTCCACTCTGCCTTCAGGCATCAAATCACTCCCCGGGCCGCCCAATTTCGCAATTTCAGTCTCACTTGTAAGATTAAGGCATCGCAGGACAAGAAGCAGAAGAATGTCAGCAACAAGATTGTGCTTTCGGAAGCAGCGCCGCCGCTTGCGGAGGAGGAGAGGGATAACAGTGGAAACACTGAAGCCGAAGTCAAGTCTGGAAATGGGAGTGGCTTGGCGAAGCTGGTGAAGAGATTGCCCAAAAGGATTTTGGGGGCTTTGTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATCGCTGCCCTGATGGCTCTTGGTATCTCCCATTTTTGTTGCTTTTCTTTTAAGTGCTTTCGAATGTGATTGGTGAATGGATGGTGCCTGTGAAGAAATTTTGGATAAGATGAGAATTGAGATAGACAAAGAATAGAAAAAGAAAGACAGTAATATTCCTTTTGTTTAACTACAGCTTAGTTGTGTAGTTTCAAATTTATAATAATTTAGTCCTTAAATTATAACATGTAATAATTTAATCCTGTACAATTTAATCCTCCCGTGAAAAGTTTCATTAAAATTAGGTATCATTGTTTGATTATGTAACAACTTATTCTTTATTCTTTAGTTTAGAAACATATTTGATTTCTAATCAATGTATTAATCAACATACGTAAGAAATGAAATCGTAGGACTAAATTGTTACATATTAAAGTTGAGGGACTATAAGTGGTTGGACATGTACAAATGATACCATATAAATGAAACCAGCCTAAACTTATCACATTTGGCATTCTTTTGCAGGTACTGTCATTGATCAAGGAGAAGCCCCTGATTTCTATTTCCAGAAGTACTCTGAGGATAATCCTTTGTGGGGATTCTTCACTTGGAGATGGATTCTTACACTTGGCTTTGATCATATGTACTCATCTACCATTTTCCTTGGGATGTTAGCTCTCCTTGGGATCTCACTCATGGCATGCACTTACACAACCCAGATTCCTCTTGTCAAGGTTGCTAGAAGGTTACAAAACACTTTCTTTCTTCCTCTGTCTCTGAAATACACATTCAGATTCCTAGCTTTTTTGTTATGAACATTCAACATTTGTATGCAGATGGAACTTTTTGCAATCTGGTGAAACCATTCGCAAGCTGGAATGTTCTGATATTTTACCCAGAGCATCAGTCCAAGATTTGGGGGTTGTTTTAATGGGAGCAGGATATGAGGTTATAACTCAAATGTTTTTTTCTTGTTTCTTATAGAATTGTTCAAGTGAAGTACAAGATGCATTTGCTTGAACAACAGATTTTGGGCATTTTTTCAAAACTTATCTCTAGGAAATGCCTCAGTCAAGAACTGTGGTGCTTTTCTTTACTTGAAATCATGGAAAGCAACTCACTAAGAATCAAACTCAGATGTTGCTCATGATAATTTTAGTGTTATTATATGAGAAATCACTGATGCTATACAAGCTAAATGTGGTCTCAAGATGCCACTCCTTGTTGCAAGTTTCTTGTCTTCCTGTTGGTAGCTCCTTATGTGTGTAGCTGAAAGTGTAATTCACTAAATAATGCGAGAAACTGAGATTGAAGTTCTCTAAATGATATAACTCATCAATTTCACAGGTGTTTATAAAAGGACCAACTTTATATGCTTTCAAGGGATTAGCTGGACGATTTGCACCAATTGGTGTACATTTGGCCATGCTTTTGATAATGGCTGGTGCAACCCTCAGTGCAACTGGAAGCTTCAGAGGTTCAGTTACAGTTCCACAGGGACTGAATTTCGTAGTTGGAGATGTTCTGAACCCGAGCGGATTTCTCTCCAAGCCAACTGAAGCTTTCAATACCGAAGTTCATGTCAACAAATTCTACATGGACTATTATGACAGTGGAGAGGTAAGTCTGGCTGAAGAAATCAATAATATCAAGAACAGTGATATATATATATATATATACAGTTATATTTCTGAAGAAAAATAACTGGAGGAGGATTAAATGAAAACTTAATTTATCTGTTTGTTAATGACAGCTTTGATATTGAGAGCACAGATTCACAGTTAGTCACCTCTATGAATGTTCAGAGTTTTCAACATTCGATTTTGCAGGTGAAACAGTTTCATAGTGATATTTCTTTGTTTGATCTTAATGGGAAAGAGGTGATGAGGAAGACAATCAGTGTAAATAATCCTTTACGGTATGGGGGCTTTACAATTTACCAAACCGATTGGGGATTTTCAGCTCTGCAAATACTTAAGAATGATGAAGGACCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAACGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGCGATGTCGATTCGCCCGATGTGAAGGGAATGTATGTCATTTCTTTTTGTACACTTCTGGACTTCTGATGTTTCTACTTTCTTTTACCATCTATCAAGCGAAATACTAGAAACAAATGTACCAATTTTGAGTGTCTTTTATGCATTTGGAGGGCATGGTATTTTCATATTTCATATTTACTTGCACTCATTTCTTTTCTCCATGATGTACTTATAGATCAATGCTTGCTCGTGATCTGCAATCCATTGTCTTGTATGATCAGGAAGGAAAGTTTGTCGGGGTTCGACGTCCGAGCTCTAAGCTTCCGATTGACATCAATGGTATAAAAATCGAAATAGTTGATGCTATTGGCAGCACTGGACTGGAATTGAAGGTAACAGCTCGGAAATGTTCAGTAGTTTTTAATCCAATGTCTCGAATTTGGAAAGCCCGAAAATGTTCAATCTTTCGTTGATATTTCCATATTTTCGAGCAATTGAAACCTTCTGTTTTTCCTTTTTCTCCAGACTGACCCAGGAGTACCTATTGTATATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTATCTCATTCACAGGTAACTCAGCTTTTCTTCAAACTGTTATGATAATGACTCATGCTGAGATGGTTTATTTAATATCAATGTTTTATAAGGAAATTGAAGTTTATGCCTTGAGGGTCGCTTCGAGACAAGGATATAACTTTTTAGCATTAAGACTTGCTTCCATGAAAACACACTGAGAATGCTTCGTGTAATGATTAGAAAAATAATATTAAGTTGCCTCATTCTTCCAAAAAGAAAAATCTATATAAAGGTTTGAGTTGTGAAGATTTGACCTATCATTATTTTTACCACTACGACTTTAAAAACATTGAAGACAAAGATTTAAAATACAAGTCAATCCTAAGAATGATAATAGTAGACATAAGATATGGGCACTCATTTGTCTTTATTATTTTTTCTACTGAAAGATATGGGCCATACAAGATGGAACGGTAGTGATCGTCGGAGGAAAGACGAACCGTGCAAAGGTTGAATTTCCAGAGGAGATGGATCGTTTACTTGATCGAGTCCCAGAAATCATTGAACCATCTCACAATAAGTGGAATAACAATGATGCCTAGTTCTCAAGACACAAAAGAGAGCAACAATCAATCAGTGTCCAAATTAACGACCAAGCACAGAATGGAGCCCCCCAGAACTTCAAAATTTTGGCCTCAGAAGATCACCGTTGGTTTTCTTCTTTTATATATACATATATAGGATGGTTTTTCCAATTTGTAATTTTTTTCATCCCCAGGAAAACCATGATCCAAGCCTTAAATAAATCATTTTTGTATATATT

mRNA sequence

ATGAAGAAGATTTGCAATGACGATGGTGTTTGGAAGGGAGGTTGTGAGATGGGAACTTCATCGCGGGATCGAGCTCGAGAACAATTATCAATGAAGAAAGGCAACAAAATGGAAACCCACTTCATAATTTCTGCAACAATGGAGGGTTTGATTCTTAACAATCCAAACCCATCTTTATCCAAACCCTTTCTTCTCAAAACCCCTTTTCTCCACTCTGCCTTCAGGCATCAAATCACTCCCCGGGCCGCCCAATTTCGCAATTTCAGTCTCACTTGTAAGATTAAGGCATCGCAGGACAAGAAGCAGAAGAATGTCAGCAACAAGATTGTGCTTTCGGAAGCAGCGCCGCCGCTTGCGGAGGAGGAGAGGGATAACAGTGGAAACACTGAAGCCGAAGTCAAGTCTGGAAATGGGAGTGGCTTGGCGAAGCTGGTGAAGAGATTGCCCAAAAGGATTTTGGGGGCTTTGTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATCGCTGCCCTGATGGCTCTTGGTACTGTCATTGATCAAGGAGAAGCCCCTGATTTCTATTTCCAGAAGTACTCTGAGGATAATCCTTTGTGGGGATTCTTCACTTGGAGATGGATTCTTACACTTGGCTTTGATCATATGTACTCATCTACCATTTTCCTTGGGATGTTAGCTCTCCTTGGGATCTCACTCATGGCATGCACTTACACAACCCAGATTCCTCTTGTCAAGGTTGCTAGAAGATGGAACTTTTTGCAATCTGGTGAAACCATTCGCAAGCTGGAATGTTCTGATATTTTACCCAGAGCATCAGTCCAAGATTTGGGGGTTGTTTTAATGGGAGCAGGATATGAGGTGTTTATAAAAGGACCAACTTTATATGCTTTCAAGGGATTAGCTGGACGATTTGCACCAATTGGTGTACATTTGGCCATGCTTTTGATAATGGCTGGTGCAACCCTCAGTGCAACTGGAAGCTTCAGAGGTTCAGTTACAGTTCCACAGGGACTGAATTTCGTAGTTGGAGATGTTCTGAACCCGAGCGGATTTCTCTCCAAGCCAACTGAAGCTTTCAATACCGAAGTTCATGTCAACAAATTCTACATGGACTATTATGACAGTGGAGAGGTGAAACAGTTTCATAGTGATATTTCTTTGTTTGATCTTAATGGGAAAGAGGTGATGAGGAAGACAATCAGTGTAAATAATCCTTTACGGTATGGGGGCTTTACAATTTACCAAACCGATTGGGGATTTTCAGCTCTGCAAATACTTAAGAATGATGAAGGACCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAACGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGCGATGTCGATTCGCCCGATGTGAAGGGAATATCAATGCTTGCTCGTGATCTGCAATCCATTGTCTTGTATGATCAGGAAGGAAAGTTTGTCGGGGTTCGACGTCCGAGCTCTAAGCTTCCGATTGACATCAATGGTATAAAAATCGAAATAGTTGATGCTATTGGCAGCACTGGACTGGAATTGAAGACTGACCCAGGAGTACCTATTGTATATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTATCTCATTCACAGATATGGGCCATACAAGATGGAACGGTAGTGATCGTCGGAGGAAAGACGAACCGTGCAAAGGTTGAATTTCCAGAGGAGATGGATCGTTTACTTGATCGAGTCCCAGAAATCATTGAACCATCTCACAATAAGTGGAATAACAATGATGCCTAGTTCTCAAGACACAAAAGAGAGCAACAATCAATCAGTGTCCAAATTAACGACCAAGCACAGAATGGAGCCCCCCAGAACTTCAAAATTTTGGCCTCAGAAGATCACCGTTGGTTTTCTTCTTTTATATATACATATATAGGATGGTTTTTCCAATTTGTAATTTTTTTCATCCCCAGGAAAACCATGATCCAAGCCTTAAATAAATCATTTTTGTATATATT

Coding sequence (CDS)

ATGAAGAAGATTTGCAATGACGATGGTGTTTGGAAGGGAGGTTGTGAGATGGGAACTTCATCGCGGGATCGAGCTCGAGAACAATTATCAATGAAGAAAGGCAACAAAATGGAAACCCACTTCATAATTTCTGCAACAATGGAGGGTTTGATTCTTAACAATCCAAACCCATCTTTATCCAAACCCTTTCTTCTCAAAACCCCTTTTCTCCACTCTGCCTTCAGGCATCAAATCACTCCCCGGGCCGCCCAATTTCGCAATTTCAGTCTCACTTGTAAGATTAAGGCATCGCAGGACAAGAAGCAGAAGAATGTCAGCAACAAGATTGTGCTTTCGGAAGCAGCGCCGCCGCTTGCGGAGGAGGAGAGGGATAACAGTGGAAACACTGAAGCCGAAGTCAAGTCTGGAAATGGGAGTGGCTTGGCGAAGCTGGTGAAGAGATTGCCCAAAAGGATTTTGGGGGCTTTGTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATCGCTGCCCTGATGGCTCTTGGTACTGTCATTGATCAAGGAGAAGCCCCTGATTTCTATTTCCAGAAGTACTCTGAGGATAATCCTTTGTGGGGATTCTTCACTTGGAGATGGATTCTTACACTTGGCTTTGATCATATGTACTCATCTACCATTTTCCTTGGGATGTTAGCTCTCCTTGGGATCTCACTCATGGCATGCACTTACACAACCCAGATTCCTCTTGTCAAGGTTGCTAGAAGATGGAACTTTTTGCAATCTGGTGAAACCATTCGCAAGCTGGAATGTTCTGATATTTTACCCAGAGCATCAGTCCAAGATTTGGGGGTTGTTTTAATGGGAGCAGGATATGAGGTGTTTATAAAAGGACCAACTTTATATGCTTTCAAGGGATTAGCTGGACGATTTGCACCAATTGGTGTACATTTGGCCATGCTTTTGATAATGGCTGGTGCAACCCTCAGTGCAACTGGAAGCTTCAGAGGTTCAGTTACAGTTCCACAGGGACTGAATTTCGTAGTTGGAGATGTTCTGAACCCGAGCGGATTTCTCTCCAAGCCAACTGAAGCTTTCAATACCGAAGTTCATGTCAACAAATTCTACATGGACTATTATGACAGTGGAGAGGTGAAACAGTTTCATAGTGATATTTCTTTGTTTGATCTTAATGGGAAAGAGGTGATGAGGAAGACAATCAGTGTAAATAATCCTTTACGGTATGGGGGCTTTACAATTTACCAAACCGATTGGGGATTTTCAGCTCTGCAAATACTTAAGAATGATGAAGGACCTTTTAACTTGGCTGTGGCACCTCTAAAGATCAACGGAGACAAGAAGCTTTATGGGACTTTCTTACCAGTTGGCGATGTCGATTCGCCCGATGTGAAGGGAATATCAATGCTTGCTCGTGATCTGCAATCCATTGTCTTGTATGATCAGGAAGGAAAGTTTGTCGGGGTTCGACGTCCGAGCTCTAAGCTTCCGATTGACATCAATGGTATAAAAATCGAAATAGTTGATGCTATTGGCAGCACTGGACTGGAATTGAAGACTGACCCAGGAGTACCTATTGTATATGCTGGATTTGGTGCTCTAATGCTCACAACATGTGTCAGTTATCTATCTCATTCACAGATATGGGCCATACAAGATGGAACGGTAGTGATCGTCGGAGGAAAGACGAACCGTGCAAAGGTTGAATTTCCAGAGGAGATGGATCGTTTACTTGATCGAGTCCCAGAAATCATTGAACCATCTCACAATAAGTGGAATAACAATGATGCCTAG

Protein sequence

MKKICNDDGVWKGGCEMGTSSRDRAREQLSMKKGNKMETHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKASQDKKQKNVSNKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDRVPEIIEPSHNKWNNNDA

Homology

[Close]

BLAST of ClCG02G005320 vs. NCBI nr
Match: XP_038889049.1 (cytochrome c biogenesis protein CCS1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 544/564 (96.45%), Postives = 554/564 (98.23%), Query Frame = 0


Query: 33  KGNKMETHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTC 92
           +GNKMETHFIISATMEGLILNNP PSLSKPFLLKTPFLH  FRHQITPRAAQ R+F +TC
Sbjct: 7   RGNKMETHFIISATMEGLILNNPKPSLSKPFLLKTPFLHYVFRHQITPRAAQLRSFCVTC 66

Query: 93  KIKASQDKKQKNVSNKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRI 152
           KIKASQDKKQKNVSNKIVLSEAAPPLAEEE DN+GN EAEVK+GNGSGLAKLVKRLPKRI
Sbjct: 67  KIKASQDKKQKNVSNKIVLSEAAPPLAEEESDNTGNAEAEVKAGNGSGLAKLVKRLPKRI 126

Query: 153 LGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGF 212
           LGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFFTWRWILTLGF
Sbjct: 127 LGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGF 186

Query: 213 DHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRAS 272
           DHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRAS
Sbjct: 187 DHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRAS 246

Query: 273 VQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSV 332
           VQDLGV+LMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSV
Sbjct: 247 VQDLGVILMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSV 306

Query: 333 TVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNG 392
           TVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSD+SLFDLNG
Sbjct: 307 TVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDLSLFDLNG 366

Query: 393 KEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTF 452
           KEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTF
Sbjct: 367 KEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTF 426

Query: 453 LPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGS 512
           LPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGS
Sbjct: 427 LPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGS 486

Query: 513 TGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEE 572
           TGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGT+VI+GGKTNRAKVEFPEE
Sbjct: 487 TGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTIVIIGGKTNRAKVEFPEE 546

Query: 573 MDRLLDRVPEIIEPSHNKWNNNDA 597
           MDRLLDRVPEIIEPSH + NNNDA
Sbjct: 547 MDRLLDRVPEIIEPSHYELNNNDA 570

[Close]

BLAST of ClCG02G005320 vs. NCBI nr
Match: XP_008454876.1 (PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo])

HSP 1 Score: 1063.1 bits (2748), Expect = 8.5e-307
Identity = 534/560 (95.36%), Postives = 543/560 (96.96%), Query Frame = 0


Query: 37  METHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKA 96
           METHFIIS+ ME LILNNPNPSLSKPFLLKTPFLHS F HQITPR AQ R+FS+TCK KA
Sbjct: 1   METHFIISSKMERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFSVTCKNKA 60

Query: 97  SQDKKQKNVSNKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGAL 156
           SQDKK KNVSNKIVLSEAAPPLAEEE D SGN EAEVK GNGSG  KLVKRLPKRILGAL
Sbjct: 61  SQDKKLKNVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGAL 120

Query: 157 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMY 216
           SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFFTWRWILTLGFDHMY
Sbjct: 121 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMY 180

Query: 217 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 276
           SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL
Sbjct: 181 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 240

Query: 277 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 336
           GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ
Sbjct: 241 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 300

Query: 337 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVM 396
           GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SD+SLFDLNGKEVM
Sbjct: 301 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVM 360

Query: 397 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 456
           RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG
Sbjct: 361 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 420

Query: 457 DVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLE 516
           DVDSP+VKGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDINGIKIEIVDAIGSTGLE
Sbjct: 421 DVDSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLE 480

Query: 517 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 576
           LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL
Sbjct: 481 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 540

Query: 577 LDRVPEIIEPSHNKWNNNDA 597
           LD+VPEIIEPSHNK  NNDA
Sbjct: 541 LDKVPEIIEPSHNKLKNNDA 560

[Close]

BLAST of ClCG02G005320 vs. NCBI nr
Match: KAA0031251.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo var. makuwa] >TYK06702.1 cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo var. makuwa])

HSP 1 Score: 1047.0 bits (2706), Expect = 6.3e-302
Identity = 526/550 (95.64%), Postives = 534/550 (97.09%), Query Frame = 0


Query: 47  MEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKASQDKKQKNVS 106
           ME LILNNPNPSLSKPFLLKTPFLHS F HQITPR AQ R+FS+TCK KASQDKK KNVS
Sbjct: 1   MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFSVTCKNKASQDKKLKNVS 60

Query: 107 NKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGALSNLPLAIGEM 166
           NKIVLSEAAPPLAEEE D SGN EAEVK GNGSG  KLVKRLPKRILGALSNLPLAIGEM
Sbjct: 61  NKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGALSNLPLAIGEM 120

Query: 167 FTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLA 226
           FTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLA
Sbjct: 121 FTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLA 180

Query: 227 LLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE 286
           LLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE
Sbjct: 181 LLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE 240

Query: 287 VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL 346
           VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL
Sbjct: 241 VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL 300

Query: 347 NPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVMRKTISVNNPL 406
           NPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SD+SLFDLNGKEVMRKTISVNNPL
Sbjct: 301 NPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKTISVNNPL 360

Query: 407 RYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGI 466
           RYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP+VKGI
Sbjct: 361 RYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPNVKGI 420

Query: 467 SMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELKTDPGVPIV 526
           SMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDINGIKIEIVDAIGSTGLELKTDPGVPIV
Sbjct: 421 SMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIV 480

Query: 527 YAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDRVPEIIEP 586
           YAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLD+VPEIIEP
Sbjct: 481 YAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEP 540

Query: 587 SHNKWNNNDA 597
           SHNK  NNDA
Sbjct: 541 SHNKLKNNDA 550

[Close]

BLAST of ClCG02G005320 vs. NCBI nr
Match: XP_011658930.1 (cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis sativus] >KGN43987.1 hypothetical protein Csa_017703 [Cucumis sativus])

HSP 1 Score: 1043.9 bits (2698), Expect = 5.4e-301
Identity = 525/560 (93.75%), Postives = 538/560 (96.07%), Query Frame = 0


Query: 37  METHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKA 96
           METHFIIS+TME LILNN NPSLSKPFLLKT FLHS F HQIT R AQ R+FS+TCK KA
Sbjct: 1   METHFIISSTMERLILNNLNPSLSKPFLLKTSFLHSVFSHQITLRTAQIRSFSVTCKNKA 60

Query: 97  SQDKKQKNVSNKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGAL 156
           SQDKK KN SNKIVLSEAAPPLAEEE D SGN EAEVK GNGS   KLVKRLPKRILGAL
Sbjct: 61  SQDKKLKNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGAL 120

Query: 157 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMY 216
           SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFF WRWILTLGFDHMY
Sbjct: 121 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMY 180

Query: 217 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 276
           SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL
Sbjct: 181 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 240

Query: 277 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 336
           GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ
Sbjct: 241 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 300

Query: 337 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVM 396
           GLNFVVGDVLNPSGFL+KPTEAFNTEVHVNKFYM+YYDSGE+KQF+SD+SLFDLNGKEVM
Sbjct: 301 GLNFVVGDVLNPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVM 360

Query: 397 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 456
           RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG
Sbjct: 361 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 420

Query: 457 DVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLE 516
           DV+SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDINGIKIEIVDAIGSTGLE
Sbjct: 421 DVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLE 480

Query: 517 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 576
           LKTDPGVPIVYAGFGALMLTTCVSYLSHSQ+WAIQDGTVVIVGGKTNRAKVEFPEEMDRL
Sbjct: 481 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 540

Query: 577 LDRVPEIIEPSHNKWNNNDA 597
           LD+VPEIIEPS+NK  NNDA
Sbjct: 541 LDKVPEIIEPSYNKLKNNDA 560

[Close]

BLAST of ClCG02G005320 vs. NCBI nr
Match: KAG7022426.1 (Cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1006.5 bits (2601), Expect = 9.5e-290
Identity = 510/566 (90.11%), Postives = 533/566 (94.17%), Query Frame = 0


Query: 34  GNKMETHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITP-RAAQFRNFSLTC 93
           G K+ETHFII ATMEGLIL+NPNP LS     KTPFLHS+FR +ITP    +  +FS+TC
Sbjct: 11  GKKVETHFIICATMEGLILHNPNPYLS-----KTPFLHSSFRPRITPYLCCRTLSFSVTC 70

Query: 94  KIKASQDKKQKNVSNKIVLSEAAPPLAEEERDNS-GNTEAEVKSGNGSGL-AKLVKRLPK 153
           K+KASQDKK KNVSNKIVLSEAAPPLAEE  +NS  NTEAEVK GNGSGL  KLVKRLPK
Sbjct: 71  KVKASQDKKPKNVSNKIVLSEAAPPLAEETDNNSANNTEAEVKPGNGSGLMMKLVKRLPK 130

Query: 154 RILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTL 213
           RILGALSNLPLAIGEMFTIAALMALGT IDQGEAPDFYFQKY EDNP+WGFFTWRWILTL
Sbjct: 131 RILGALSNLPLAIGEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTL 190

Query: 214 GFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPR 273
           GFDHMY+STIFL ML+LLG+SLMACTYTTQIPLVKVARRWNFLQSGE IRKLECS+ILPR
Sbjct: 191 GFDHMYTSTIFLAMLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGEAIRKLECSEILPR 250

Query: 274 ASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRG 333
           ASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA GSFRG
Sbjct: 251 ASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRG 310

Query: 334 SVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDL 393
           SVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVN FYMDYYDSGEVKQFHSD+SLFDL
Sbjct: 311 SVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDL 370

Query: 394 NGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYG 453
           NGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYG
Sbjct: 371 NGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYG 430

Query: 454 TFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAI 513
           TFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDI+G+KIEI+DAI
Sbjct: 431 TFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAI 490

Query: 514 GSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFP 573
           GSTGLELKTDPGVP+VYAGFGALMLTTC+S+LSHSQIWAIQDGTVVI+GGKTNRAKVEFP
Sbjct: 491 GSTGLELKTDPGVPVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIIGGKTNRAKVEFP 550

Query: 574 EEMDRLLDRVPEIIEPSHNKWNNNDA 597
           EE+D LLDRVPEIIEPSHN  NNNDA
Sbjct: 551 EEIDSLLDRVPEIIEPSHNVLNNNDA 571

[Close]

BLAST of ClCG02G005320 vs. ExPASy Swiss-Prot
Match: Q9XIA4 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCS1 PE=1 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 3.8e-217
Identity = 375/509 (73.67%), Postives = 435/509 (85.46%), Query Frame = 0


Query: 86  RNFSL--TCKIKASQDKKQKNVSNK-----IVLSEAAPPLAEEERDN--SGNTEAEVKSG 145
           RN SL   CK++  QD  Q++ SN+     I LS++APP+ EE  D    G        G
Sbjct: 29  RNVSLITNCKLQKPQDGNQRSSSNRNLTKTISLSDSAPPVTEETGDGIVKGGGNGGGGGG 88

Query: 146 NGSGLAKLVKRLPKRILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDN 205
           +G G    +K LP+++L  LSNLPLAI EMFTIAALMALGTVI+QGE PDFYFQKY EDN
Sbjct: 89  DGRGGLGFLKILPRKVLSVLSNLPLAITEMFTIAALMALGTVIEQGETPDFYFQKYPEDN 148

Query: 206 PLWGFFTWRWILTLGFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSG 265
           P+ GFFTWRWI TLG DHMYS+ IFLGML LL  SLMACTYTTQIPLVKVARRW+F++S 
Sbjct: 149 PVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAASLMACTYTTQIPLVKVARRWSFMKSD 208

Query: 266 ETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLI 325
           E I+K E +D LPRAS+QDLG++LMG G+EVF+KGP+LYAFKGLAGRFAPIGVH+AMLLI
Sbjct: 209 EAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKGPSLYAFKGLAGRFAPIGVHIAMLLI 268

Query: 326 MAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSG 385
           M G TLSATGSFRGSVTVPQGLNFV+GDVL P GF S PT+AFNTEVHVN+F MDYYDSG
Sbjct: 269 MVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFNTEVHVNRFTMDYYDSG 328

Query: 386 EVKQFHSDISLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLA 445
           EV QFHSD+SL DLNGKEV+RKTISVN+PLRYGG T+YQTDW FSALQ+ K+ EGPFNLA
Sbjct: 329 EVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKDGEGPFNLA 388

Query: 446 VAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLP 505
           +AP+KINGDKKLYGTFLPVGD ++P+VKGISMLARDLQSIV+YD +GKF G+RRPSSKLP
Sbjct: 389 MAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLARDLQSIVVYDLDGKFAGIRRPSSKLP 448

Query: 506 IDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVV 565
           I+ING+KI I DAIGSTGLELKTDPGVP+VYAGFGALMLTTC+SYLSHSQIWA+Q+GT +
Sbjct: 449 IEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQNGTAL 508

Query: 566 IVGGKTNRAKVEFPEEMDRLLDRVPEIIE 586
           +VGGKTNRAK +FP++M+RLLD+VPE+I+
Sbjct: 509 VVGGKTNRAKNQFPDDMNRLLDQVPELIK 537

[Close]

BLAST of ClCG02G005320 vs. ExPASy Swiss-Prot
Match: Q75KA9 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CCS1 PE=2 SV=1)

HSP 1 Score: 724.2 bits (1868), Expect = 1.2e-207
Identity = 355/489 (72.60%), Postives = 416/489 (85.07%), Query Frame = 0


Query: 108 KIVLSEAAPPLAEE------ERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGALSNLPL 167
           ++V  +AAPP+++       E +  G  E +V     +    LV+RL KR L  LSNLPL
Sbjct: 68  QVVFFDAAPPVSQRGGGGGGEGEGEGEGEGKVARRKENAALGLVRRLTKRTLSLLSNLPL 127

Query: 168 AIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMYSSTIF 227
           AI EMF IAALMALGTVIDQGEAP +YF+K+ EDNP++GF TWRWILT GFDHM+SS +F
Sbjct: 128 AISEMFAIAALMALGTVIDQGEAPSYYFEKFPEDNPVFGFITWRWILTPGFDHMFSSPVF 187

Query: 228 LGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLM 287
           LG+LALL  SLMACTYTTQIP+VKVARRW+F+ S  +IRK E ++ LPRAS+QDLGV+LM
Sbjct: 188 LGLLALLAASLMACTYTTQIPIVKVARRWSFMHSAGSIRKQEFAESLPRASIQDLGVILM 247

Query: 288 GAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFV 347
           G GYEVF KGP+LYAFKGLAGRFAPIGVH+AM+ IMAGATLSATGSF+GSV VPQGLNFV
Sbjct: 248 GYGYEVFTKGPSLYAFKGLAGRFAPIGVHIAMIFIMAGATLSATGSFKGSVDVPQGLNFV 307

Query: 348 VGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVMRKTIS 407
           +GDV+ P G LS   + FNTEVHVN+FYM+YYDSGEV QF+SD+SLFDL+GKEVMRKTI 
Sbjct: 308 IGDVMKPKGVLSFVPDVFNTEVHVNRFYMEYYDSGEVSQFYSDLSLFDLDGKEVMRKTIK 367

Query: 408 VNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP 467
           VN+PLRYGG TIYQTDWGFSALQ+ KN EGPFNLA+APLK+NGDKKL+GT LP+ +  S 
Sbjct: 368 VNDPLRYGGVTIYQTDWGFSALQVKKNGEGPFNLAMAPLKLNGDKKLFGTLLPLENSGSS 427

Query: 468 DVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELKTDP 527
           +VKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPI+I+G +I I DAIGSTGL+LKTDP
Sbjct: 428 NVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEIDGNEIVIEDAIGSTGLDLKTDP 487

Query: 528 GVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDRVP 587
           G+PIVYAGFGALMLTTC+SYLSHSQIWA+QDG+ V++GGKTNRAK+EF EEM+RLLD+VP
Sbjct: 488 GIPIVYAGFGALMLTTCISYLSHSQIWALQDGSTVVIGGKTNRAKLEFSEEMNRLLDKVP 547

Query: 588 EIIEPSHNK 591
           E+I  +  K
Sbjct: 548 ELISVNEKK 556

[Close]

BLAST of ClCG02G005320 vs. ExPASy Swiss-Prot
Match: Q8GTZ9 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CCS1 PE=1 SV=2)

HSP 1 Score: 397.5 bits (1020), Expect = 2.6e-109
Identity = 239/553 (43.22%), Postives = 322/553 (58.23%), Query Frame = 0


Query: 92  CKIKASQ--DKKQKNVSNKIVLSEAAPPL----AEEERD-NSGNTEAEVKSGNGSG---- 151
           C  K  Q  DKK+ NV++K+ L    P L    A    D  S   +A   SG G G    
Sbjct: 38  CFAKGGQPGDKKKLNVTDKLRLGNTPPTLDVLKAPRPTDAPSAIDDAPSTSGLGLGGGVA 97

Query: 152 ------LAKLVKRLPKRILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSE 211
                  +  V+   +R++  LS+LP AI  M  IA L  LGT I Q ++ ++Y   Y +
Sbjct: 98  SPRTLVQSNAVQVAWRRLMKELSSLPRAIAIMALIAVLSGLGTFIPQNKSIEYYLVNYPD 157

Query: 212 D-NPLWGFFTWRWILTLGFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFL 271
               + GF T   ILTL  DH+Y++  F   + LL  SL ACTYT Q P VKVA+RW FL
Sbjct: 158 GAEKVLGFLTGDLILTLQLDHIYTADYFYLSMGLLAASLAACTYTRQWPAVKVAQRWRFL 217

Query: 272 QSGETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAM 331
              +++ K   +++LP A V DLG +L+  GY+VF+K  +LY FKGLAG+  PIGVH A+
Sbjct: 218 TQPKSLLKQGRTEVLPNARVSDLGAILLQRGYQVFVKDGSLYGFKGLAGKLGPIGVHAAL 277

Query: 332 LLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYY 391
           LL + G   S  G+ +G+V  P+G +F V   L PS  ++    + +  +HVNKF +DY 
Sbjct: 278 LLCLFGTAWSGFGTLKGNVMCPEGQDFQVASFLQPSSPIASMPASASNVIHVNKFTIDYR 337

Query: 392 DSGEVKQFHSDISLFD--LNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSA--LQILKND 451
             G V QF+SD+SL D    GKE+MRKTISVN+P R+ G T+YQTDW  SA  L++L  D
Sbjct: 338 PDGSVAQFYSDLSLLDPAQGGKEMMRKTISVNDPFRFNGVTMYQTDWSLSAVTLRVLGQD 397

Query: 452 ------------------EGP-----------------FNLAVAPL--KINGDKKLYGTF 511
                              GP                 FNL +A L  K     +L+ TF
Sbjct: 398 APLARAAQAAEAQAAASTSGPTSSASSTSDALPQQRTAFNLPMASLEGKPGVAGRLWATF 457

Query: 512 LPVGD--VDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAI 571
           LP+ +   D    KGIS+LARD QS+V YD +G+FVGVRRP S  PI++ G+ + + D  
Sbjct: 458 LPLAEPGQDGSAPKGISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVVEDVT 517

Query: 572 GSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFP 584
           G+TGLELK+DPGVP VYAGFG LM+TT +SYLSHSQ+WA+Q G+ + V G+TNRAK+ F 
Sbjct: 518 GATGLELKSDPGVPAVYAGFGGLMVTTLISYLSHSQVWALQQGSSLFVSGRTNRAKLAFD 577

[Close]

BLAST of ClCG02G005320 vs. ExPASy Swiss-Prot
Match: Q118K5 (Cytochrome c biogenesis protein CcsB OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ccsB PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-94
Identity = 188/451 (41.69%), Postives = 278/451 (61.64%), Query Frame = 0


Query: 132 EVKSGNGSGLAKLVKRLPKRILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQK 191
           +V+  + + L   ++   + IL  L++L LAI  +  IA     GTVI+QGE+  FY + 
Sbjct: 2   DVEDSDKNSLINPLRIFKREILPLLADLRLAIALLLIIAICSISGTVIEQGESIAFYQEN 61

Query: 192 YSEDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWN 251
           Y E   L+GF TW+ IL L  DH+Y +  FL +L L G SL ACT+T Q+P +K A RW 
Sbjct: 62  YPEKPALFGFLTWKVILLLELDHVYRTWWFLSILILFGASLTACTFTRQLPALKSANRWK 121

Query: 252 FLQSGETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHL 311
           F    +  + L  S  +  AS+  L  +L   GY+   +G  LY  KG+ G+  PI VH 
Sbjct: 122 FYNKKQQFKNLALSAEIETASLDSLEEILQKRGYKTSKEGDKLYGRKGIIGKVGPIIVHA 181

Query: 312 AMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMD 371
           +ML+I+AG+ + +   F G   VP G  F V ++++ +G  +K     N  V VN+F++D
Sbjct: 182 SMLIILAGSIIGSMTGFLGQEIVPSGETFQVKNIID-AGIFAKSQIPKNWSVRVNRFWID 241

Query: 372 YYDSGEVKQFHSDISLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEG 431
           Y  SG + QF+SD+S+ D +G+EV RKTI VN P+RY G T+YQ DW  +A+++  N   
Sbjct: 242 YTPSGGIDQFYSDLSILDKSGEEVDRKTIFVNQPMRYHGVTMYQADWAIAAVKVRVNKSP 301

Query: 432 PFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV-KGISMLARDLQ-SIVLYDQEGKFVGVR 491
            F L +A L   G  K++GT++P+     PD+ +G+S+LA+DLQ ++++YD  GK V   
Sbjct: 302 VFRLPMAQLNTEGGGKIWGTWVPI----KPDLSEGVSLLAKDLQGNVLVYDTSGKLVASV 361

Query: 492 RPSSKLPIDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWA 551
           R    + I+++G+ + I   IGSTGL++K DPG+PIVY GFG LML+  +SY+SHSQIWA
Sbjct: 362 REG--MFIEVSGVTLFIDKIIGSTGLQIKADPGIPIVYLGFGLLMLSVLMSYVSHSQIWA 421

Query: 552 IQDGTVVIVGGKTNRAKVEFPEEMDRLLDRV 581
            Q+   + +GGKTNRA V F  E+  +LDR+
Sbjct: 422 FQESERLYIGGKTNRANVTFEREILDILDRL 445

[Close]

BLAST of ClCG02G005320 vs. ExPASy Swiss-Prot
Match: Q3M6F7 (Cytochrome c biogenesis protein CcsB OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=ccsB PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.4e-94
Identity = 188/438 (42.92%), Postives = 268/438 (61.19%), Query Frame = 0


Query: 146 KRLPKRILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWR 205
           K L +  L  L++L LAI  +  IA     GTVI+QG++P FY   Y E   L+GF TW+
Sbjct: 19  KFLRREFLPVLTDLRLAIALLLIIALFSISGTVIEQGQSPAFYQANYPEHPALFGFLTWK 78

Query: 206 WILTLGFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECS 265
            I  +G DH+Y +  FL +L L G SL ACT+T Q+P +K A+RW + +     +KL  S
Sbjct: 79  VIQVVGLDHVYRTWWFLSLLVLFGTSLTACTFTRQLPALKTAQRWKYYEEPRQFQKLALS 138

Query: 266 DILPRASVQDLGVVLMGAGYEVF-IKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSA 325
             L   SV  L  +L    Y++F  K   LYA KG+ GR  PI VH+ ++ I+ G+   A
Sbjct: 139 AELDAGSVNSLSQILQNRRYKIFQEKDDILYARKGIVGRIGPIIVHIGIVTILLGSIWGA 198

Query: 326 TGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSD 385
              F     VP G  F V ++++ +G L+      +  V VN+F++DY   G + QF+SD
Sbjct: 199 MTGFIAQEMVPSGETFQVKNIID-AGPLAAGQFPQDWSVRVNRFWIDYTPKGGIDQFYSD 258

Query: 386 ISLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKING 445
           +S+ D  GKEV  K I VN PLRY G T YQTDWG S +++  N    F L +A L  NG
Sbjct: 259 MSVLDNQGKEVDHKKIFVNQPLRYHGVTFYQTDWGISGVRVRLNKSPIFQLPMALLNTNG 318

Query: 446 DKKLYGTFLPVGDVDSPDV-KGISMLARDLQSIVL-YDQEGKFVGVRRPSSKLPIDINGI 505
             +++GT++P      PD+ +G+S+LA+DLQ +VL YD +GK V   R  + +   +NG+
Sbjct: 319 QGRIWGTWIPT----KPDLSEGVSLLAKDLQGMVLIYDAQGKLVDTVR--AGMSTQVNGV 378

Query: 506 KIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKT 565
            ++++D +GSTGL++K DPG+PIVY GFG LML   +SY SHSQIWA+Q G  + VGGKT
Sbjct: 379 TLKVLDVVGSTGLQIKADPGIPIVYTGFGILMLGVVMSYFSHSQIWALQKGDRLYVGGKT 438

Query: 566 NRAKVEFPEEMDRLLDRV 581
           NRA+V F +E+  +L+R+
Sbjct: 439 NRAQVAFEQEVLEILERL 449

[Close]

BLAST of ClCG02G005320 vs. ExPASy TrEMBL
Match: A0A1S3BZ46 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495188 PE=3 SV=1)

HSP 1 Score: 1063.1 bits (2748), Expect = 4.1e-307
Identity = 534/560 (95.36%), Postives = 543/560 (96.96%), Query Frame = 0


Query: 37  METHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKA 96
           METHFIIS+ ME LILNNPNPSLSKPFLLKTPFLHS F HQITPR AQ R+FS+TCK KA
Sbjct: 1   METHFIISSKMERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFSVTCKNKA 60

Query: 97  SQDKKQKNVSNKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGAL 156
           SQDKK KNVSNKIVLSEAAPPLAEEE D SGN EAEVK GNGSG  KLVKRLPKRILGAL
Sbjct: 61  SQDKKLKNVSNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGAL 120

Query: 157 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMY 216
           SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFFTWRWILTLGFDHMY
Sbjct: 121 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMY 180

Query: 217 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 276
           SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL
Sbjct: 181 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 240

Query: 277 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 336
           GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ
Sbjct: 241 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 300

Query: 337 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVM 396
           GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SD+SLFDLNGKEVM
Sbjct: 301 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVM 360

Query: 397 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 456
           RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG
Sbjct: 361 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 420

Query: 457 DVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLE 516
           DVDSP+VKGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDINGIKIEIVDAIGSTGLE
Sbjct: 421 DVDSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLE 480

Query: 517 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 576
           LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL
Sbjct: 481 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 540

Query: 577 LDRVPEIIEPSHNKWNNNDA 597
           LD+VPEIIEPSHNK  NNDA
Sbjct: 541 LDKVPEIIEPSHNKLKNNDA 560

[Close]

BLAST of ClCG02G005320 vs. ExPASy TrEMBL
Match: A0A5D3C5Y2 (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00030 PE=3 SV=1)

HSP 1 Score: 1047.0 bits (2706), Expect = 3.1e-302
Identity = 526/550 (95.64%), Postives = 534/550 (97.09%), Query Frame = 0


Query: 47  MEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKASQDKKQKNVS 106
           ME LILNNPNPSLSKPFLLKTPFLHS F HQITPR AQ R+FS+TCK KASQDKK KNVS
Sbjct: 1   MERLILNNPNPSLSKPFLLKTPFLHSVFGHQITPRTAQIRSFSVTCKNKASQDKKLKNVS 60

Query: 107 NKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGALSNLPLAIGEM 166
           NKIVLSEAAPPLAEEE D SGN EAEVK GNGSG  KLVKRLPKRILGALSNLPLAIGEM
Sbjct: 61  NKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSGSTKLVKRLPKRILGALSNLPLAIGEM 120

Query: 167 FTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLA 226
           FTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLA
Sbjct: 121 FTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFTWRWILTLGFDHMYSSTIFLGMLA 180

Query: 227 LLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE 286
           LLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE
Sbjct: 181 LLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE 240

Query: 287 VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL 346
           VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL
Sbjct: 241 VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL 300

Query: 347 NPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVMRKTISVNNPL 406
           NPSGFLSKPTEAFNTEVHVNKFYM+YYDSGEVKQF+SD+SLFDLNGKEVMRKTISVNNPL
Sbjct: 301 NPSGFLSKPTEAFNTEVHVNKFYMNYYDSGEVKQFYSDLSLFDLNGKEVMRKTISVNNPL 360

Query: 407 RYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDVKGI 466
           RYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSP+VKGI
Sbjct: 361 RYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPNVKGI 420

Query: 467 SMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELKTDPGVPIV 526
           SMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDINGIKIEIVDAIGSTGLELKTDPGVPIV
Sbjct: 421 SMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLELKTDPGVPIV 480

Query: 527 YAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDRVPEIIEP 586
           YAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLD+VPEIIEP
Sbjct: 481 YAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDKVPEIIEP 540

Query: 587 SHNKWNNNDA 597
           SHNK  NNDA
Sbjct: 541 SHNKLKNNDA 550

[Close]

BLAST of ClCG02G005320 vs. ExPASy TrEMBL
Match: A0A0A0K6S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075670 PE=3 SV=1)

HSP 1 Score: 1043.9 bits (2698), Expect = 2.6e-301
Identity = 525/560 (93.75%), Postives = 538/560 (96.07%), Query Frame = 0


Query: 37  METHFIISATMEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPRAAQFRNFSLTCKIKA 96
           METHFIIS+TME LILNN NPSLSKPFLLKT FLHS F HQIT R AQ R+FS+TCK KA
Sbjct: 1   METHFIISSTMERLILNNLNPSLSKPFLLKTSFLHSVFSHQITLRTAQIRSFSVTCKNKA 60

Query: 97  SQDKKQKNVSNKIVLSEAAPPLAEEERDNSGNTEAEVKSGNGSGLAKLVKRLPKRILGAL 156
           SQDKK KN SNKIVLSEAAPPLAEEE D SGN EAEVK GNGS   KLVKRLPKRILGAL
Sbjct: 61  SQDKKLKNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGAL 120

Query: 157 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMY 216
           SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKY EDNPLWGFF WRWILTLGFDHMY
Sbjct: 121 SNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMY 180

Query: 217 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 276
           SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL
Sbjct: 181 SSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDL 240

Query: 277 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 336
           GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ
Sbjct: 241 GVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQ 300

Query: 337 GLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVM 396
           GLNFVVGDVLNPSGFL+KPTEAFNTEVHVNKFYM+YYDSGE+KQF+SD+SLFDLNGKEVM
Sbjct: 301 GLNFVVGDVLNPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVM 360

Query: 397 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 456
           RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG
Sbjct: 361 RKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVG 420

Query: 457 DVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLE 516
           DV+SPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSS+LPIDINGIKIEIVDAIGSTGLE
Sbjct: 421 DVNSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSRLPIDINGIKIEIVDAIGSTGLE 480

Query: 517 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 576
           LKTDPGVPIVYAGFGALMLTTCVSYLSHSQ+WAIQDGTVVIVGGKTNRAKVEFPEEMDRL
Sbjct: 481 LKTDPGVPIVYAGFGALMLTTCVSYLSHSQVWAIQDGTVVIVGGKTNRAKVEFPEEMDRL 540

Query: 577 LDRVPEIIEPSHNKWNNNDA 597
           LD+VPEIIEPS+NK  NNDA
Sbjct: 541 LDKVPEIIEPSYNKLKNNDA 560

[Close]

BLAST of ClCG02G005320 vs. ExPASy TrEMBL
Match: A0A6J1JI27 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111485982 PE=3 SV=1)

HSP 1 Score: 992.3 bits (2564), Expect = 9.0e-286
Identity = 503/553 (90.96%), Postives = 524/553 (94.76%), Query Frame = 0


Query: 47  MEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITPR-AAQFRNFSLTCKIKASQDKKQKNV 106
           MEGLIL+NPNP LS     KTPFLHSAFR QITP    +  +FS+TCK+KASQDKK KNV
Sbjct: 1   MEGLILHNPNPYLS-----KTPFLHSAFRPQITPNLCCRTLSFSVTCKVKASQDKKPKNV 60

Query: 107 SNKIVLSEAAPPLAEEERDNSG-NTEAEVKSGNGSGL-AKLVKRLPKRILGALSNLPLAI 166
           SNKIVLSEAAPPLAEE  +N+G NTEAEVKSGNGSGL  KLVKRLPKRILGALSNLPLAI
Sbjct: 61  SNKIVLSEAAPPLAEETDNNNGNNTEAEVKSGNGSGLMMKLVKRLPKRILGALSNLPLAI 120

Query: 167 GEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMYSSTIFLG 226
           GEMFTIAALMALGT IDQGEAPDFYFQKY EDNP+WGFFTWRWILTLGFDHMY+STIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 227 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 286
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQSG+ IRKLECS+ILPRASVQDLGVVLMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGDAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 287 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 346
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA GSFRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 347 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVMRKTISVN 406
           DVLNPSGFLSKPTEAFNTEVHVN FYMDYYDSGEVKQFHSD+SLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 407 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 466
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 467 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELKTDPGV 526
           KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 527 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDRVPEI 586
           P+VYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFPEE+D LLDRVPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 587 IEPSHNKWNNNDA 597
           IEPSHN  NNNDA
Sbjct: 541 IEPSHNGLNNNDA 548

[Close]

BLAST of ClCG02G005320 vs. ExPASy TrEMBL
Match: A0A6J1EUQ2 (cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437776 PE=3 SV=1)

HSP 1 Score: 987.3 bits (2551), Expect = 2.9e-284
Identity = 501/553 (90.60%), Postives = 522/553 (94.39%), Query Frame = 0


Query: 47  MEGLILNNPNPSLSKPFLLKTPFLHSAFRHQITP-RAAQFRNFSLTCKIKASQDKKQKNV 106
           MEGLIL+NPNP LS     KTPFLHS+FR QITP    +  +FS+TCK+KASQDKK KNV
Sbjct: 1   MEGLILHNPNPYLS-----KTPFLHSSFRPQITPYLCCRTLSFSVTCKVKASQDKKPKNV 60

Query: 107 SNKIVLSEAAPPLAEEERDNS-GNTEAEVKSGNGSGL-AKLVKRLPKRILGALSNLPLAI 166
           SN+IVLSEAAPPLAEE  +NS  NTEAEVK GNGSGL  KLVKRLPKRILGALSNLPLAI
Sbjct: 61  SNRIVLSEAAPPLAEETDNNSANNTEAEVKPGNGSGLMMKLVKRLPKRILGALSNLPLAI 120

Query: 167 GEMFTIAALMALGTVIDQGEAPDFYFQKYSEDNPLWGFFTWRWILTLGFDHMYSSTIFLG 226
           GEMFTIAALMALGT IDQGEAPDFYFQKY EDNP+WGFFTWRWILTLGFDHMY+STIFL 
Sbjct: 121 GEMFTIAALMALGTFIDQGEAPDFYFQKYPEDNPMWGFFTWRWILTLGFDHMYTSTIFLA 180

Query: 227 MLALLGISLMACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGA 286
           ML+LLG+SLMACTYTTQIPLVKVARRWNFLQSGE IRKLECS+ILPRASVQDLGVVLMGA
Sbjct: 181 MLSLLGLSLMACTYTTQIPLVKVARRWNFLQSGEAIRKLECSEILPRASVQDLGVVLMGA 240

Query: 287 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVG 346
           GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIM GATLSA GSFRGSVTVPQGLNFVVG
Sbjct: 241 GYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMGGATLSAAGSFRGSVTVPQGLNFVVG 300

Query: 347 DVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSGEVKQFHSDISLFDLNGKEVMRKTISVN 406
           DVLNPSGFLSKPTEAFNTEVHVN FYMDYYDSGEVKQFHSD+SLFDLNGKEVMRKTISVN
Sbjct: 301 DVLNPSGFLSKPTEAFNTEVHVNNFYMDYYDSGEVKQFHSDLSLFDLNGKEVMRKTISVN 360

Query: 407 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 466
           NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV
Sbjct: 361 NPLRYGGFTIYQTDWGFSALQILKNDEGPFNLAVAPLKINGDKKLYGTFLPVGDVDSPDV 420

Query: 467 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDINGIKIEIVDAIGSTGLELKTDPGV 526
           KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDI+G+KIEI+DAIGSTGLELKTDPGV
Sbjct: 421 KGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIDIDGMKIEILDAIGSTGLELKTDPGV 480

Query: 527 PIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEMDRLLDRVPEI 586
           P+VYAGFGALMLTTC+S+LSHSQIWAIQDGTVVIVGGKTNRAKVEFPEE+D LLDRVPEI
Sbjct: 481 PVVYAGFGALMLTTCISFLSHSQIWAIQDGTVVIVGGKTNRAKVEFPEEIDSLLDRVPEI 540

Query: 587 IEPSHNKWNNNDA 597
           IEPSHN  NNNDA
Sbjct: 541 IEPSHNGLNNNDA 548

[Close]

BLAST of ClCG02G005320 vs. TAIR 10
Match: AT1G49380.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 755.7 bits (1950), Expect = 2.7e-218
Identity = 375/509 (73.67%), Postives = 435/509 (85.46%), Query Frame = 0


Query: 86  RNFSL--TCKIKASQDKKQKNVSNK-----IVLSEAAPPLAEEERDN--SGNTEAEVKSG 145
           RN SL   CK++  QD  Q++ SN+     I LS++APP+ EE  D    G        G
Sbjct: 29  RNVSLITNCKLQKPQDGNQRSSSNRNLTKTISLSDSAPPVTEETGDGIVKGGGNGGGGGG 88

Query: 146 NGSGLAKLVKRLPKRILGALSNLPLAIGEMFTIAALMALGTVIDQGEAPDFYFQKYSEDN 205
           +G G    +K LP+++L  LSNLPLAI EMFTIAALMALGTVI+QGE PDFYFQKY EDN
Sbjct: 89  DGRGGLGFLKILPRKVLSVLSNLPLAITEMFTIAALMALGTVIEQGETPDFYFQKYPEDN 148

Query: 206 PLWGFFTWRWILTLGFDHMYSSTIFLGMLALLGISLMACTYTTQIPLVKVARRWNFLQSG 265
           P+ GFFTWRWI TLG DHMYS+ IFLGML LL  SLMACTYTTQIPLVKVARRW+F++S 
Sbjct: 149 PVLGFFTWRWISTLGLDHMYSAPIFLGMLVLLAASLMACTYTTQIPLVKVARRWSFMKSD 208

Query: 266 ETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPTLYAFKGLAGRFAPIGVHLAMLLI 325
           E I+K E +D LPRAS+QDLG++LMG G+EVF+KGP+LYAFKGLAGRFAPIGVH+AMLLI
Sbjct: 209 EAIKKQEFADTLPRASIQDLGMILMGDGFEVFMKGPSLYAFKGLAGRFAPIGVHIAMLLI 268

Query: 326 MAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLSKPTEAFNTEVHVNKFYMDYYDSG 385
           M G TLSATGSFRGSVTVPQGLNFV+GDVL P GF S PT+AFNTEVHVN+F MDYYDSG
Sbjct: 269 MVGGTLSATGSFRGSVTVPQGLNFVMGDVLAPIGFFSIPTDAFNTEVHVNRFTMDYYDSG 328

Query: 386 EVKQFHSDISLFDLNGKEVMRKTISVNNPLRYGGFTIYQTDWGFSALQILKNDEGPFNLA 445
           EV QFHSD+SL DLNGKEV+RKTISVN+PLRYGG T+YQTDW FSALQ+ K+ EGPFNLA
Sbjct: 329 EVSQFHSDLSLRDLNGKEVLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKDGEGPFNLA 388

Query: 446 VAPLKINGDKKLYGTFLPVGDVDSPDVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLP 505
           +AP+KINGDKKLYGTFLPVGD ++P+VKGISMLARDLQSIV+YD +GKF G+RRPSSKLP
Sbjct: 389 MAPIKINGDKKLYGTFLPVGDTNAPNVKGISMLARDLQSIVVYDLDGKFAGIRRPSSKLP 448

Query: 506 IDINGIKIEIVDAIGSTGLELKTDPGVPIVYAGFGALMLTTCVSYLSHSQIWAIQDGTVV 565
           I+ING+KI I DAIGSTGLELKTDPGVP+VYAGFGALMLTTC+SYLSHSQIWA+Q+GT +
Sbjct: 449 IEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQNGTAL 508

Query: 566 IVGGKTNRAKVEFPEEMDRLLDRVPEIIE 586
           +VGGKTNRAK +FP++M+RLLD+VPE+I+
Sbjct: 509 VVGGKTNRAKNQFPDDMNRLLDQVPELIK 537

The following BLAST results are available for this feature:

BLAST of ClCG02G005320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889049.1	0.0e+00	96.45	cytochrome c biogenesis protein CCS1, chloroplastic isoform X1 [Benincasa hispid...	[more]
XP_008454876.1	8.5e-307	95.36	PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo]	[more]
KAA0031251.1	6.3e-302	95.64	cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis melo var. makuwa] >...	[more]
XP_011658930.1	5.4e-301	93.75	cytochrome c biogenesis protein CCS1, chloroplastic [Cucumis sativus] >KGN43987....	[more]
KAG7022426.1	9.5e-290	90.11	Cytochrome c biogenesis protein CCS1, chloroplastic [Cucurbita argyrosperma subs...	[more]

BLAST of ClCG02G005320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIA4	3.8e-217	73.67	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q75KA9	1.2e-207	72.60	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q8GTZ9	2.6e-109	43.22	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii...	[more]
Q118K5	1.1e-94	41.69	Cytochrome c biogenesis protein CcsB OS=Trichodesmium erythraeum (strain IMS101)...	[more]
Q3M6F7	2.4e-94	42.92	Cytochrome c biogenesis protein CcsB OS=Trichormus variabilis (strain ATCC 29413...	[more]

BLAST of ClCG02G005320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZ46	4.1e-307	95.36	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo OX=3656 GN=L...	[more]
A0A5D3C5Y2	3.1e-302	95.64	Cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucumis melo var. makuwa ...	[more]
A0A0A0K6S4	2.6e-301	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075670 PE=3 SV=1	[more]
A0A6J1JI27	9.0e-286	90.96	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1EUQ2	2.9e-284	90.60	cytochrome c biogenesis protein CCS1, chloroplastic OS=Cucurbita moschata OX=366...	[more]

BLAST of ClCG02G005320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49380.1	2.7e-218	73.67	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007816	ResB-like domain	PFAM	PF05140	ResB	coord: 161..422 e-value: 1.6E-60 score: 205.3 coord: 462..573 e-value: 3.5E-14 score: 52.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..136
IPR023494	Cytochrome c biogenesis protein Ccs1/CcsB/ResB	PANTHER	PTHR31566	CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC	coord: 112..587
IPR023494	Cytochrome c biogenesis protein Ccs1/CcsB/ResB	HAMAP	MF_01392	CytC_Ccs1	coord: 149..578 score: 33.492298

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G005320.1	ClCG02G005320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0016021	integral component of membrane