ClCG02G005020 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G005020
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial
LocationCG_Chr02: 5382781 .. 5384627 (+)
RNA-Seq ExpressionClCG02G005020
SyntenyClCG02G005020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAGCCAGTTGCTAAACCCGCCTCCAGCGGTGTGTTCTAGAAATGGCTGCCGTTTGCCGATCACTTCTAACGGCGGCGGGTTCAAGGTCCATGGCCGGCCGTACCAGAACACTGGCTCATAAAACCCTAAATCCAATGCTTGTTTCTTCGTCCTCCAGAGGCATCCCTTCCGTTTCCAGGTACTTTCACTTCAAATTTTGTAGGGTCATTTAGTCCTTTACGTGCCGGAATTTCTTTGCGATCTCAGTTAATTTTTACTGTTTTTGGACTTTTTGGGATCCTGATTATACTTGATTTGCTTCCATTTTCATTGCTTGTCCTTCGTTTCTTTCCAGGATTGTTTCGTCTTTGGCTACTGTGGAGTCACTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGGCTGAAGTCTAAAATTGCCGTCGACTCACATTGCTGGAGCTGGCTTTCTGAAGGTTGTTTTATTATCCATTACTTTATTTACGTTGTTCTTATGAATGTGAGCATTTTTATCTGCAATATGGAGAGGGTTTTGTGTTCATTTGATTTGGGATTTTGCTTTGTTAATACATCCATTTCCTTGTTCTCTGTTGGATTCTTGATGCACTGCAAAATTTCTAGTAGGCATTCCTTTGAATTTGATTCTATTTTCCTAAAGTTTATCTCTCAACCTCTATATTTGATGGAAAATGAAGTATAAGAAGTTGGGAAATGAACTTCTTGTATCCGTAGGATACATAATAGGCTTTGAATTTGATTGCCTTCAACTCTTAACGCATTTTTTATTGGTCTCCTTTCCATTCTAAGTTCAGCCTGGTCAGAGACGATTTTGTTTTTGAAAAATGTTACCTTACTAGCTTATTTATTTAGTTTCTTACTTAACAGAAGAAAATCCTTTCGAAATTTTGGCCAATTTTCAAATACCAAAATCATAAGAATTACCAAGAAAGAGTTCATACAAGCTTATGTATAAAAAGATGGAAAATGGAAAATAAAATTCTTACCAAATTTGACCAATTATTCATTTTTTCTGATAAGAAACAGCGGACCATATTACCGAAGGGCGGAGTGGCAAGGTGCCAGACCCCAAAAACAACATCATTAATGCCTTTGCCCCCCAATTGTGGAGGTTTTGGTTGAAGTTATAGTTACAAAAGAAAACATTGTGTTTAAGAGTCCAAGAAGACGAAGTAATTTGTACAAGGTTACAAAATCAACAAAAGAGTCAGACTTATCTTCAAAGATCCTTCTATTCCTTTCTTTCCAAAGCTCCCACATCAGAGTTCGGGCTGCACGACCCCACAAAATCTTTGTTTTGTCTTAATTGACCCATTAGTTATATGCTAACATTGCATCTTTTGTGTATGTACTCTTTGGGTTATGAATTGCATTCAAAAAATGACAATCACTAACTCTCATCTTGAATGGTCAATCATATGTCTCTTGCATATCCTATTGAGTTCAGTTCCTAACTTCATCCTTCTACCTTATCTTTTAGGATTTGCAACACCTTTGTGACACAACGGTTGGTGAGGACGTAATTGATAATACAGCTGAATGACAGTTAGCTGAAACGACATAGGACTTGCGAGGTTTTTCATCTTTCCTACTTATCTTTGTAAGATACCTTTATCACAAGGAAGAATTATTTAGACAACTTTTTTGGAGTTTTGATCACTGTATAATGCAATGCGGCCACATTTTCTGGATATGCGGAGAGCTATTGTTTTAAGCCTCTGAACACAAACCTTGAGAGTTAGATCTTTGTTAGGCATCTCTCTGTTGCTCTTGACTTTGTTCAATAACATGCAATTGATTTCCTATATTCTCTAAATATAGGGTCTTG

mRNA sequence

ATAAAGCCAGTTGCTAAACCCGCCTCCAGCGGTGTGTTCTAGAAATGGCTGCCGTTTGCCGATCACTTCTAACGGCGGCGGGTTCAAGGTCCATGGCCGGCCGTACCAGAACACTGGCTCATAAAACCCTAAATCCAATGCTTGTTTCTTCGTCCTCCAGAGGCATCCCTTCCGTTTCCAGGATTGTTTCGTCTTTGGCTACTGTGGAGTCACTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGGCTGAAGTCTAAAATTGCCGTCGACTCACATTGCTGGAGCTGGCTTTCTGAAGGTTGTTTTATTATCCATTACTTTATTTACGTTGTTCTTATGAATGATTTGCAACACCTTTGTGACACAACGGTTGGTGAGGACGTAATTGATAATACAGCTGAATGACAGTTAGCTGAAACGACATAGGACTTGCGAGGTTTTTCATCTTTCCTACTTATCTTTGTAAGATACCTTTATCACAAGGAAGAATTATTTAGACAACTTTTTTGGAGTTTTGATCACTGTATAATGCAATGCGGCCACATTTTCTGGATATGCGGAGAGCTATTGTTTTAAGCCTCTGAACACAAACCTTGAGAGTTAGATCTTTGTTAGGCATCTCTCTGTTGCTCTTGACTTTGTTCAATAACATGCAATTGATTTCCTATATTCTCTAAATATAGGGTCTTG

Coding sequence (CDS)

ATGGCTGCCGTTTGCCGATCACTTCTAACGGCGGCGGGTTCAAGGTCCATGGCCGGCCGTACCAGAACACTGGCTCATAAAACCCTAAATCCAATGCTTGTTTCTTCGTCCTCCAGAGGCATCCCTTCCGTTTCCAGGATTGTTTCGTCTTTGGCTACTGTGGAGTCACTGATGCCACTCCACAGCGCCGTCGCCTCAGCTCGGCTGAAGTCTAAAATTGCCGTCGACTCACATTGCTGGAGCTGGCTTTCTGAAGGTTGTTTTATTATCCATTACTTTATTTACGTTGTTCTTATGAATGATTTGCAACACCTTTGTGACACAACGGTTGGTGAGGACGTAATTGATAATACAGCTGAATGA

Protein sequence

MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMPLHSAVASARLKSKIAVDSHCWSWLSEGCFIIHYFIYVVLMNDLQHLCDTTVGEDVIDNTAE
Homology
[Close]
BLAST of ClCG02G005020 vs. NCBI nr
Match: XP_038887804.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-32
Identity = 80/86 (93.02%), Postives = 82/86 (95.35%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMPL 60
          MA+VCRSLLTAA SRSMAGRTRTLAHKTLNP+LVSSSSRG  SVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSLLTAAASRSMAGRTRTLAHKTLNPLLVSSSSRGFSSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEG 87
          HSAVASARLKSKIAVDSHCW WLSEG
Sbjct: 61 HSAVASARLKSKIAVDSHCWCWLSEG 86

[Close]
BLAST of ClCG02G005020 vs. NCBI nr
Match: XP_022136047.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-31
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLV-SSSSRGIPSVSRIVSSLATVESLMP 60
          MAAVCRSLLTAAGSRS+AGRTRTL  KTLNPM V SSSSRG+PSVSRIVSSLATVESLMP
Sbjct: 1  MAAVCRSLLTAAGSRSIAGRTRTLTPKTLNPMPVSSSSSRGVPSVSRIVSSLATVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEG 87
          LHSAVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 LHSAVASARLKSKIAVDSHCWSWLSEG 87

[Close]
BLAST of ClCG02G005020 vs. NCBI nr
Match: XP_023531748.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 5.2e-30
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMPL 60
          MA+VCRS+LTA GSRSMAGRTRTL  KTLNPM  SSSS+G+ SVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGSRSMAGRTRTLLRKTLNPMPDSSSSKGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEG 87
          HSAVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEG 86

[Close]
BLAST of ClCG02G005020 vs. NCBI nr
Match: KAG7022286.1 (hypothetical protein SDJN02_16017, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-29
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMPL 60
          MA+VCRS+LTA GSR MAGRTRTL  KTLNPM  SSSS+G+ SVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGSRPMAGRTRTLLRKTLNPMPESSSSKGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEG 87
          HSAVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEG 86

[Close]
BLAST of ClCG02G005020 vs. NCBI nr
Match: KAG6588438.1 (hypothetical protein SDJN03_17003, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 9.9e-29
Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMPL 60
          MA+VCRS+LTA GSR MAGRTRTL  KTLNPM  SSSS+G+ SVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGSRPMAGRTRTLLRKTLNPMPESSSSKGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSE 86
          HSAVASARLKSKIAVDSHCWSWLSE
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSE 85

[Close]
BLAST of ClCG02G005020 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-05
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0 

Query: 6  RSLLTAAGSRSMAGRTRTLAHKTLN-PMLVSSSSRGIPSVSRI---VSSLATVESLMPLH 65
          RS+L AA SRS A  T   A +  + P L  +++R  P +S +   V     VESL+P H
Sbjct: 11 RSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPYH 70

Query: 66 SAVASARLKSKIAVDSHCWSWLSEGC 88
          SA ASA + SK+++    + WLS+ C
Sbjct: 71 SATASALMTSKLSISGQTYGWLSDAC 96

[Close]
BLAST of ClCG02G005020 vs. ExPASy TrEMBL
Match: A0A6J1C4G8 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007834 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 81/87 (93.10%), Postives = 83/87 (95.40%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLV-SSSSRGIPSVSRIVSSLATVESLMP 60
          MAAVCRSLLTAAGSRS+AGRTRTL  KTLNPM V SSSSRG+PSVSRIVSSLATVESLMP
Sbjct: 1  MAAVCRSLLTAAGSRSIAGRTRTLTPKTLNPMPVSSSSSRGVPSVSRIVSSLATVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEG 87
          LHSAVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 LHSAVASARLKSKIAVDSHCWSWLSEG 87

[Close]
BLAST of ClCG02G005020 vs. ExPASy TrEMBL
Match: A0A5D3BYV0 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2392G00150 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.2e-29
Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MAAVCRSLLT-AAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMP 60
          MA+V RSLLT AA SRSMAGRTR LAHKTLNP+LVSSSSR  PS++RIVSSLA VESLMP
Sbjct: 1  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEG 87
          LH+AVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 LHTAVASARLKSKIAVDSHCWSWLSEG 87

[Close]
BLAST of ClCG02G005020 vs. ExPASy TrEMBL
Match: A0A1S3BGG1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103489582 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.2e-29
Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MAAVCRSLLT-AAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMP 60
          MA+V RSLLT AA SRSMAGRTR LAHKTLNP+LVSSSSR  PS++RIVSSLA VESLMP
Sbjct: 1  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMP 60

Query: 61 LHSAVASARLKSKIAVDSHCWSWLSEG 87
          LH+AVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 LHTAVASARLKSKIAVDSHCWSWLSEG 87

[Close]
BLAST of ClCG02G005020 vs. ExPASy TrEMBL
Match: A0A6J1F5F6 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441012 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESLMPL 60
          MA+VCRS+LTA G+R + GRTRTL  KTLNPM  SSSSRG+ SVSRIVSSLATVESLMPL
Sbjct: 1  MASVCRSVLTATGARFVTGRTRTLVRKTLNPMPGSSSSRGLTSVSRIVSSLATVESLMPL 60

Query: 61 HSAVASARLKSKIAVDSHCWSWLSEG 87
          HSAVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 HSAVASARLKSKIAVDSHCWSWLSEG 86

[Close]
BLAST of ClCG02G005020 vs. ExPASy TrEMBL
Match: A0A6J1GKU0 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454867 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.0e-28
Identity = 74/89 (83.15%), Postives = 79/89 (88.76%), Query Frame = 0 

Query: 1  MAAVCRSLLTAA---GSRSMAGRTRTLAHKTLNPMLVSSSSRGIPSVSRIVSSLATVESL 60
          MA++CRSLL AA   GSRSMAGRTRTLAH TL P+ VSSSSRG  SVSRI SSLA+V+SL
Sbjct: 1  MASICRSLLAAAAAGGSRSMAGRTRTLAHVTLKPVPVSSSSRGFISVSRIASSLASVDSL 60

Query: 61 MPLHSAVASARLKSKIAVDSHCWSWLSEG 87
          MPLHSAVASARLKSKIAVDSHCWSWLSEG
Sbjct: 61 MPLHSAVASARLKSKIAVDSHCWSWLSEG 89

[Close]
BLAST of ClCG02G005020 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLN--PMLVS----SSSRGIPSVSRIVSSLATV 60
          MA+ CRS L  AGSR++  R+RT+  K+LN  P   S    S S+ IP  SR++S+L +V
Sbjct: 1  MASFCRSAL-MAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSV 60

Query: 61 ESLMPLHSAVASARLKSKIAVDSHCWSWLSEG 87
          E+++PLHSAVASARL+S IA DS CWS LS+G
Sbjct: 61 ETMIPLHSAVASARLRSSIAADSSCWSLLSQG 91

[Close]
BLAST of ClCG02G005020 vs. TAIR 10
Match: AT4G39300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 0 

Query: 1  MAAVCRSLLTAAGSRSMAGRTRTLAHKTLN--PMLVS----SSSRGIPSVSRIVSSLATV 60
          MA+ CRS L  AGSR++  R+RT+  K+LN  P   S    S S+ IP  SR++S+L +V
Sbjct: 1  MASFCRSAL-MAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRASRVLSALGSV 60

Query: 61 ESLMPLHSAVASARLKSKIAVDSHCWSWLSE 86
          E+++PLHSAVASARL+S IA DS CWS LS+
Sbjct: 61 ETMIPLHSAVASARLRSSIAADSSCWSLLSQ 90

[Close]
BLAST of ClCG02G005020 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 )

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0 

Query: 6  RSLLTAAGSRSMAGRTRTLAHKTLN-PMLVSSSSRGIPSVSRI---VSSLATVESLMPLH 65
          RS+L AA SRS A  T   A +  + P L  +++R  P +S +   V     VESL+P H
Sbjct: 11 RSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPYH 70

Query: 66 SAVASARLKSKIAVDSHCWSWLSEGC 88
          SA ASA + SK+++    + WLS+ C
Sbjct: 71 SATASALMTSKLSISGQTYGWLSDAC 96

[Close]
BLAST of ClCG02G005020 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 )

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 0 

Query: 6  RSLLTAAGSRSMAGRTRTLAHKTLN-PMLVSSSSRGIPSVSRI---VSSLATVESLMPLH 65
          RS+L AA SRS A  T   A +  + P L  +++R  P +S +   V     VESL+P H
Sbjct: 11 RSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPYH 70

Query: 66 SAVASARLKSKIAVDSHCWSWLSEGC 88
          SA ASA + SK+++    + WLS+ C
Sbjct: 71 SATASALMTSKLSISGQTYGWLSDAC 96

[Close]
BLAST of ClCG02G005020 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 )

HSP 1 Score: 48.9 bits (115), Expect = 3.3e-06
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 6  RSLLTAAGSRSMAGRTRTLAHKTLN-PMLVSSSSRGIPSVSRI---VSSLATVESLMPLH 65
          RS+L AA SRS A  T   A +  + P L  +++R  P +S +   V     VESL+P H
Sbjct: 11 RSMLRAASSRSAAASTGRFASQAKSAPPLFRATARRSPLLSPLRNPVELSFCVESLLPYH 70

Query: 66 SAVASARLKSKIAVDSHCWSWLSEG 87
          SA ASA + SK+++    + WLS+G
Sbjct: 71 SATASALMTSKLSISGQTYGWLSDG 95

The following BLAST results are available for this feature:
BLAST of ClCG02G005020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887804.11.9e-3293.02protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida][more]
XP_022136047.12.1e-3193.10protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica chara... [more]
XP_023531748.15.2e-3088.37protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita pepo ... [more]
KAG7022286.11.5e-2987.21hypothetical protein SDJN02_16017, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6588438.19.9e-2987.06hypothetical protein SDJN03_17003, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of ClCG02G005020 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZJ32.7e-0539.53Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
BLAST of ClCG02G005020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C4G81.0e-3193.10protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Momordica cha... [more]
A0A5D3BYV06.2e-2986.21Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3BGG16.2e-2986.21protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucumis ... [more]
A0A6J1F5F68.2e-2984.88protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbit... [more]
A0A6J1GKU09.0e-2883.15protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like OS=Cucurbit... [more]
BLAST of ClCG02G005020 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39300.11.6e-1654.35unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G39300.21.0e-1553.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G20585.11.9e-0639.53nuclear fusion defective 6 [more]
AT2G20585.21.9e-0639.53nuclear fusion defective 6 [more]
AT2G20585.33.3e-0640.00nuclear fusion defective 6 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 1..87
NoneNo IPR availablePANTHERPTHR33156:SF37BNAA06G40680D PROTEINcoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G005020.1ClCG02G005020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane