ClCG02G004412 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G004412
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	SAUR-like auxin-responsive protein family
Location	CG_Chr02: 4496433 .. 4498704 (+)
RNA-Seq Expression	ClCG02G004412
Synteny	ClCG02G004412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCGGTTGCCTAAAATTGTTCATGTTAAGCAAAGTCTTCGTCGGTCTTCATCAACTGGAAATGGAGCATCGGCGGTTGACGTTCCAAAGGGGTTCTTTACTGTTTATGTTGGTGAAGTACAAAAGAAGCGTTTCGTCATTCCAATGTCGTACTTGAACCAGCCTACTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCACCCCATGGGCGGCATCACAATTCCTTGCAGTGAAGAAATTTTCCTTGATCTCACTCAAAGTTTGAAAGACTAATGAACTAGAGGGATTGGTATCTAGAAATTGGTTGTACAGAAAAAGGATTAGAATAGTACAGAATGAGTCGTATACATTTCTTGAAATGAGAAAACTTGATTCTTTGAATTGAAACTTTTGTCTAGCGATCCTTATTCTTTACATTCTTAACACTTTCTGATGAAACTACTTGAATGATAATATTGGCTACAAAAACTTGCATAAACTGGATTATACTACTTGAAATGGCTACTTGCAGTCCTACATAATGTTTTTTTGCTTACTCATGTCCTCTAATTCAAATTATTAATCAAGAGATGAATACAGAATCTATCTTTTCTTCTATTATTTTATGATTTCAAATATAATGCAAACACTTGCAACAAAATTGTATTCAACCTTTTGTTTTAGCAGAAGTTTCAATAGATATTAATTTTGTATATCTAATAGGGCTTTGAAATTTTAATTTTGTATATAATAGGGACTAAATAAACACAAATGTTAAAGTTCAATGACTTGTTAGAAACTTTTAAAAATTCATGGACCAAATAGACTCAAACATCAATGTTCAAGGACTAATCACCATGATTAGCATAGTATTCATAATGTTTAATCAAGAAGCTGGACTGATATTAGATTATGCACTATATTCAACTGAGGCTAATACTCATAAATCTACCAATATACACTACCAATGAGAGCCATGTTATTGATGATAAGTCAGAAAACAAAACCATGTGCCATCCATTAATGATTGTAACAGATTGCCACATTTTTCCCTAGCTTAATTTGAGTATAAAGGATATACATTTATATTAGAATCATGTAGGGATATACACATATCCATTACCATTCAAATTTGCTAAATGTAGCTTCTTCTCTTTTATTCCTTGTCAGGCTGTTAGTGTGTTGATATAATATTAAATTTACTTTCATCCATTAGCTTAAACTTTTTGATCAATTGGTGATTTAACATTGTATCAAAGCGGGAGGCCCTATGTTTAAATCCCTGCAATGTTATTTTCTCCCCAGTTCATATTGATTTAGGTCAATTGGTGATTTAACACAGGCAAATACTCACAATGAACCTCACGTAAGAACAAACAAAACCGATATTTCTTGCTCTACAATCACTGTATATTGGATCCAAAGAAAAAACCAAAGTTTCTGTAGAACCGCAGTATCCAATCTAAAGATTTTAAGAGTTCTTTGTTAACACTAACAACAACAAAGCTTCTTAGTTAGACAACTAATTAATGCAATTAAACTTCATTTCACCAGAAGGACAGGAAGGGCTTGAATGCCTCAAATATGTCTATGATACTATTAAAATTTTAGAGGTTTATAAGTTTATTCAGCTTACTTCTCTAGTTGTTATCTAAAAACAAAAGCAGGCCATGTTGTTTCTGCACAAGGTATACAAAATGACCATATATCACATGAATTTGAAATTCTCATAATGGCTTAGAAGACACATCCATGTGGTAGGTCATGAGCTAATATCTATCTAGAATTGAATCTCATCTTCTTACCTTGACTACATCTTTAAGTAACCTAAGCCTTTCATCTATATAAAGGTCATGTTATATGGATTCACAAGCAACGTGTCCTTCCATATTCCAACTCTCAAAAGAAACTTCAAAGTTCAAATTTCCTTTCGGGGTCTCATATTTCGAATCTTGGAACATATTACAACATGGGTTTCCGTTTGCCCCGAATTGTTACTGCTAAGCAAAGTCTCCAGCGATCTTCATCAACAGGAAATGGAACATCCCCAAAAGCTGTTGACGTTCCCAAGGGCTATTTTACTGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTGTCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCTAATGGGTGGCATCACAATTCCTTGCCGTGAAGACGAGTTCCTCAATCTCACTCAGAGTTGGAATGGCTCGTGA

mRNA sequence

ATGGGTTTCCGGTTGCCTAAAATTGTTCATGTTAAGCAAAGTCTTCGTCGGTCTTCATCAACTGGAAATGGAGCATCGGCGGTTGACGTTCCAAAGGGGTTCTTTACTGTTTATGTTGGTGAAGTACAAAAGAAGCGTTTCGTCATTCCAATGTCGTACTTGAACCAGCCTACTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCACCCCATGGGCGGCATCACAATTCCTTGCAGTGAAGAAATTTTCCTTGATCTCACTCAAAGTCATGTTATATGGATTCACAAGCAACGTGTCCTTCCATATTCCAACTCTCAAAAGAAACTTCAAAGTTCAAATTTCCTTTCGGGGTCTCATATTTCGAATCTTGGAACATATTACAACATGGGTTTCCGTTTGCCCCGAATTGTTACTGCTAAGCAAAGTCTCCAGCGATCTTCATCAACAGGAAATGGAACATCCCCAAAAGCTGTTGACGTTCCCAAGGGCTATTTTACTGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTGTCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCTAATGGGTGGCATCACAATTCCTTGCCGTGAAGACGAGTTCCTCAATCTCACTCAGAGTTGGAATGGCTCGTGA

Coding sequence (CDS)

ATGGGTTTCCGGTTGCCTAAAATTGTTCATGTTAAGCAAAGTCTTCGTCGGTCTTCATCAACTGGAAATGGAGCATCGGCGGTTGACGTTCCAAAGGGGTTCTTTACTGTTTATGTTGGTGAAGTACAAAAGAAGCGTTTCGTCATTCCAATGTCGTACTTGAACCAGCCTACTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCACCCCATGGGCGGCATCACAATTCCTTGCAGTGAAGAAATTTTCCTTGATCTCACTCAAAGTCATGTTATATGGATTCACAAGCAACGTGTCCTTCCATATTCCAACTCTCAAAAGAAACTTCAAAGTTCAAATTTCCTTTCGGGGTCTCATATTTCGAATCTTGGAACATATTACAACATGGGTTTCCGTTTGCCCCGAATTGTTACTGCTAAGCAAAGTCTCCAGCGATCTTCATCAACAGGAAATGGAACATCCCCAAAAGCTGTTGACGTTCCCAAGGGCTATTTTACTGTTTATGTTGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTGTCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCTAATGGGTGGCATCACAATTCCTTGCCGTGAAGACGAGTTCCTCAATCTCACTCAGAGTTGGAATGGCTCGTGA

Protein sequence

MGFRLPKIVHVKQSLRRSSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPTFQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSNFLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLTQSWNGS

Homology

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BLAST of ClCG02G004412 vs. NCBI nr
Match: BBH09288.1 (SAUR-like auxin-responsive protein family, partial [Prunus dulcis])

HSP 1 Score: 256.1 bits (653), Expect = 2.8e-64
Identity = 136/229 (59.39%), Postives = 152/229 (66.38%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGN--GASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MGFRLP IV+ K+SL RS ST N    S  D+PKG+F VYVGE QKKRFVIP+SYLN+  
Sbjct: 5   MGFRLPGIVNAKRSLIRSRSTSNRTAESKTDIPKGYFAVYVGESQKKRFVIPVSYLNETL 64

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSN 120
           F +LLSQAEEEFGY+HPMGGITIPCSE  FL LT S                        
Sbjct: 65  FLELLSQAEEEFGYNHPMGGITIPCSESTFLGLTSS------------------------ 124

Query: 121 FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQ 180
                          MGFRLP IV AK+SL RS ST   T+    D+PKGYF VYVGE Q
Sbjct: 125 -------------LTMGFRLPGIVNAKRSLIRSRSTSKQTAESKTDIPKGYFAVYVGESQ 184

Query: 181 KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLT 228
           KKRFVIP+SYLN+P F DLLSQAEEEFGY+H MGGITIPC E+ FL+LT
Sbjct: 185 KKRFVIPVSYLNEPLFLDLLSQAEEEFGYDHPMGGITIPCSENTFLDLT 196

[Close]

BLAST of ClCG02G004412 vs. NCBI nr
Match: RXH85432.1 (hypothetical protein DVH24_002530 [Malus domestica])

HSP 1 Score: 245.4 bits (625), Expect = 5.0e-61
Identity = 132/247 (53.44%), Postives = 156/247 (63.16%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRR--SSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MGFRLP IV  K+SL R  S+S    +  +D+PKG+F VY GE QKKRFVIP+SYLN P 
Sbjct: 1   MGFRLPGIVSAKRSLIRSLSNSKQTASKTLDIPKGYFAVYAGERQKKRFVIPISYLNDPL 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQ--------------SHVIWIHKQRV 120
           FQDLLSQAEEEFGYDHPMGGITIPCSE  FL LT               +  + +    +
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEYTFLHLTSRLREAMVNHPLNQLTSSVEVKPSVI 120

Query: 121 LPYSNSQKKLQ--------SSNFLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGN 180
           L     Q             S F    H+++L  +  MGFR P I+ AK+         N
Sbjct: 121 LKQPAEQTNTSLLFPSISYQSTFCPEIHLNSLLNFKTMGFRFPGIIHAKK---------N 180

Query: 181 GTSPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITI 224
             S K++DVPKGY  +YVGE QKKRF+IP+SYLNQPSFQDLLS AE+EFGY+H MGGITI
Sbjct: 181 QVSSKSLDVPKGYLAIYVGESQKKRFIIPVSYLNQPSFQDLLSLAEDEFGYDHPMGGITI 238

[Close]

BLAST of ClCG02G004412 vs. NCBI nr
Match: KAA0049693.1 (auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12179.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 245.0 bits (624), Expect = 6.5e-61
Identity = 126/229 (55.02%), Postives = 159/229 (69.43%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGNGAS--AVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MGFRLP+IV  KQSL +SSST N AS  AVDVPKG+F VY+GE QKKRF IP+SYLNQP+
Sbjct: 1   MGFRLPRIVTAKQSLHQSSSTENRASTKAVDVPKGYFAVYIGEEQKKRFFIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSN 120
           FQDLLSQ EEEFGY+HPMGGITIPC+E  FL+LT+ ++          ++N Q + + + 
Sbjct: 61  FQDLLSQVEEEFGYNHPMGGITIPCNEAYFLNLTRIYIF---------FNNIQDRERQAT 120

Query: 121 FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQ 180
                             RLPRI+  K++ +R +S    +S  +  V KGY  VYVGEE+
Sbjct: 121 ----------------AIRLPRIIQVKKNFRRVASKSAESSLVSNKVSKGYIPVYVGEER 180

Query: 181 KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLT 228
           ++R+ +PLSYLN+PSFQ LL +AEEEFGY+H MGG+TIPCRE  F  LT
Sbjct: 181 RERYAVPLSYLNEPSFQKLLRKAEEEFGYDHPMGGLTIPCREKAFAGLT 204

[Close]

BLAST of ClCG02G004412 vs. NCBI nr
Match: RXI00424.1 (hypothetical protein DVH24_037972 [Malus domestica])

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-60
Identity = 125/237 (52.74%), Postives = 165/237 (69.62%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGN---GASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQP 60
           MGFRLP ++  K+ LRRS S  +     +  DVPKG+F VYVG+ +K+RFV+P+S LNQP
Sbjct: 1   MGFRLPSVIPAKKLLRRSFSNSSQQVSYNLADVPKGYFPVYVGKSEKQRFVVPISILNQP 60

Query: 61  TFQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDL-TQSHVIWIHKQRVLPYSNSQKKLQS 120
           +FQDLLS+AEEEFGYDHPMGG+TIPC ++ FLDL ++     +   +   Y+    KL+ 
Sbjct: 61  SFQDLLSEAEEEFGYDHPMGGVTIPCRQDTFLDLISRLSAFCLRALKEGDYNEFHGKLKY 120

Query: 121 SN------FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRS-SSTGNGTSPKAVDVPKGY 180
           S       FL+      L  +  MGFRLP I+ AK+ L+ S S++  G      DVPKGY
Sbjct: 121 SKQELRNLFLALCVHILLSRFTTMGFRLPAIIPAKKLLRLSFSNSSQGALYNLADVPKGY 180

Query: 181 FTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNL 227
           F VYVGE +K+RFV+P+S +NQPSFQ LLS+AEEEFGY+H MGG+TIPCR+D F++L
Sbjct: 181 FPVYVGESEKQRFVVPISIVNQPSFQGLLSEAEEEFGYDHQMGGLTIPCRQDTFIDL 237

[Close]

BLAST of ClCG02G004412 vs. NCBI nr
Match: KAF8406542.1 (hypothetical protein HHK36_008630 [Tetracentron sinense])

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-60
Identity = 126/233 (54.08%), Postives = 157/233 (67.38%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSS--TGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MG R+P I+H K+ LRRS S  + + ++  DVPKG F VYVGE  KKRFV+P+SYLNQP+
Sbjct: 1   MGIRMPGIIHAKKVLRRSLSNVSQSSSTGTDVPKGHFAVYVGETYKKRFVVPISYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSN 120
           FQDLLS AEEE+G+DHPMGG+TIPC+E  FLDLT                     L+S +
Sbjct: 61  FQDLLSCAEEEYGFDHPMGGLTIPCNENAFLDLT------------------SLLLRSCS 120

Query: 121 FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQ 180
             S  +      Y +MG RLP I+ AK+ L+RS S  + +     DVPKG+F VYVGE  
Sbjct: 121 CFSLDYY----PYKSMGIRLPGIIHAKKVLRRSLSNVSQSVSTGTDVPKGHFAVYVGETY 180

Query: 181 KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLTQSWN 232
           KKRFV+P+SYLNQPSFQDLLS AE E+G++H MGG+TIPC ED FL+ T   N
Sbjct: 181 KKRFVVPISYLNQPSFQDLLSCAEVEYGFDHPMGGLTIPCNEDAFLDPTSRLN 211

[Close]

BLAST of ClCG02G004412 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-27
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 134 MGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 193
           MGFRLP        ++++S   N  S K+V+VPKGY  VYVG++  +RF+IP+SYLNQPS
Sbjct: 1   MGFRLP-------GIRKTSIAANQASSKSVEVPKGYLVVYVGDKM-RRFLIPVSYLNQPS 60

Query: 194 FQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLTQSWN 232
           FQDLL+QAEEEFGY+H MGG+TIPC+EDEFL +T   N
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

[Close]

BLAST of ClCG02G004412 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-25
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 1  MGFRLPKIVHVKQSLRRSSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPTFQ 60
          MGFRLP        +R++S      +AVD PKG+  VYVGE + KRFVIP+SY+NQP+FQ
Sbjct: 1  MGFRLP-------GIRKAS------NAVDAPKGYLAVYVGE-KMKRFVIPVSYMNQPSFQ 60

Query: 61 DLLSQAEEEFGYDHPMGGITIPCSEEIFLDLT 93
          DLL+QAEEEFGYDHPMGG+TIPCSEE+F  +T
Sbjct: 61 DLLTQAEEEFGYDHPMGGLTIPCSEEVFQRIT 78

[Close]

BLAST of ClCG02G004412 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.6e-25
Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 134 MGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 193
           MGFRLP        ++++S + N  S KAVDV KGY  VYVGE+  +RFVIP+SYLN+PS
Sbjct: 1   MGFRLP-------GIRKASFSANQASSKAVDVEKGYLAVYVGEKM-RRFVIPVSYLNKPS 60

Query: 194 FQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLTQSWN 232
           FQDLLSQAEEEFGY+H  GG+TIPC ED F ++T   N
Sbjct: 61  FQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of ClCG02G004412 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-25
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 134 MGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPS 193
           MGFR+  IV      +R+S      + K VDVPKGY  VYVG++  +RF IP+SYLN+PS
Sbjct: 1   MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGDKM-RRFTIPVSYLNEPS 60

Query: 194 FQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLTQSWN 232
           FQ+LLSQAEEEFGY+H MGG+TIPC+E+EFLN+T   N
Sbjct: 61  FQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91

[Close]

BLAST of ClCG02G004412 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.8e-25
Identity = 58/92 (63.04%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MGFRLPKIVHVKQSLRRSSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPTFQ 60
          MGFRLP        +R++S       A D PKG+  VYVGE + KRFVIP+SYLNQP+FQ
Sbjct: 1  MGFRLP-------GIRKAS------KAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQ 60

Query: 61 DLLSQAEEEFGYDHPMGGITIPCSEEIFLDLT 93
          DLLSQAEEEFGYDHPMGG+TIPCSE++F  +T
Sbjct: 61 DLLSQAEEEFGYDHPMGGLTIPCSEDVFQCIT 78

[Close]

BLAST of ClCG02G004412 vs. ExPASy TrEMBL
Match: A0A4Y1RZK4 (SAUR-like auxin-responsive protein family (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_021740 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 136/229 (59.39%), Postives = 152/229 (66.38%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGN--GASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MGFRLP IV+ K+SL RS ST N    S  D+PKG+F VYVGE QKKRFVIP+SYLN+  
Sbjct: 5   MGFRLPGIVNAKRSLIRSRSTSNRTAESKTDIPKGYFAVYVGESQKKRFVIPVSYLNETL 64

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSN 120
           F +LLSQAEEEFGY+HPMGGITIPCSE  FL LT S                        
Sbjct: 65  FLELLSQAEEEFGYNHPMGGITIPCSESTFLGLTSS------------------------ 124

Query: 121 FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQ 180
                          MGFRLP IV AK+SL RS ST   T+    D+PKGYF VYVGE Q
Sbjct: 125 -------------LTMGFRLPGIVNAKRSLIRSRSTSKQTAESKTDIPKGYFAVYVGESQ 184

Query: 181 KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLT 228
           KKRFVIP+SYLN+P F DLLSQAEEEFGY+H MGGITIPC E+ FL+LT
Sbjct: 185 KKRFVIPVSYLNEPLFLDLLSQAEEEFGYDHPMGGITIPCSENTFLDLT 196

[Close]

BLAST of ClCG02G004412 vs. ExPASy TrEMBL
Match: A0A498IU46 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_002530 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.4e-61
Identity = 132/247 (53.44%), Postives = 156/247 (63.16%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRR--SSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MGFRLP IV  K+SL R  S+S    +  +D+PKG+F VY GE QKKRFVIP+SYLN P 
Sbjct: 1   MGFRLPGIVSAKRSLIRSLSNSKQTASKTLDIPKGYFAVYAGERQKKRFVIPISYLNDPL 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQ--------------SHVIWIHKQRV 120
           FQDLLSQAEEEFGYDHPMGGITIPCSE  FL LT               +  + +    +
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEYTFLHLTSRLREAMVNHPLNQLTSSVEVKPSVI 120

Query: 121 LPYSNSQKKLQ--------SSNFLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGN 180
           L     Q             S F    H+++L  +  MGFR P I+ AK+         N
Sbjct: 121 LKQPAEQTNTSLLFPSISYQSTFCPEIHLNSLLNFKTMGFRFPGIIHAKK---------N 180

Query: 181 GTSPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITI 224
             S K++DVPKGY  +YVGE QKKRF+IP+SYLNQPSFQDLLS AE+EFGY+H MGGITI
Sbjct: 181 QVSSKSLDVPKGYLAIYVGESQKKRFIIPVSYLNQPSFQDLLSLAEDEFGYDHPMGGITI 238

[Close]

BLAST of ClCG02G004412 vs. ExPASy TrEMBL
Match: A0A5D3CPE1 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001200 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.2e-61
Identity = 126/229 (55.02%), Postives = 159/229 (69.43%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGNGAS--AVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           MGFRLP+IV  KQSL +SSST N AS  AVDVPKG+F VY+GE QKKRF IP+SYLNQP+
Sbjct: 1   MGFRLPRIVTAKQSLHQSSSTENRASTKAVDVPKGYFAVYIGEEQKKRFFIPLSYLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSN 120
           FQDLLSQ EEEFGY+HPMGGITIPC+E  FL+LT+ ++          ++N Q + + + 
Sbjct: 61  FQDLLSQVEEEFGYNHPMGGITIPCNEAYFLNLTRIYIF---------FNNIQDRERQAT 120

Query: 121 FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQ 180
                             RLPRI+  K++ +R +S    +S  +  V KGY  VYVGEE+
Sbjct: 121 ----------------AIRLPRIIQVKKNFRRVASKSAESSLVSNKVSKGYIPVYVGEER 180

Query: 181 KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLT 228
           ++R+ +PLSYLN+PSFQ LL +AEEEFGY+H MGG+TIPCRE  F  LT
Sbjct: 181 RERYAVPLSYLNEPSFQKLLRKAEEEFGYDHPMGGLTIPCREKAFAGLT 204

[Close]

BLAST of ClCG02G004412 vs. ExPASy TrEMBL
Match: A0A498K299 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037972 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.2e-60
Identity = 125/237 (52.74%), Postives = 165/237 (69.62%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGN---GASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQP 60
           MGFRLP ++  K+ LRRS S  +     +  DVPKG+F VYVG+ +K+RFV+P+S LNQP
Sbjct: 1   MGFRLPSVIPAKKLLRRSFSNSSQQVSYNLADVPKGYFPVYVGKSEKQRFVVPISILNQP 60

Query: 61  TFQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDL-TQSHVIWIHKQRVLPYSNSQKKLQS 120
           +FQDLLS+AEEEFGYDHPMGG+TIPC ++ FLDL ++     +   +   Y+    KL+ 
Sbjct: 61  SFQDLLSEAEEEFGYDHPMGGVTIPCRQDTFLDLISRLSAFCLRALKEGDYNEFHGKLKY 120

Query: 121 SN------FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRS-SSTGNGTSPKAVDVPKGY 180
           S       FL+      L  +  MGFRLP I+ AK+ L+ S S++  G      DVPKGY
Sbjct: 121 SKQELRNLFLALCVHILLSRFTTMGFRLPAIIPAKKLLRLSFSNSSQGALYNLADVPKGY 180

Query: 181 FTVYVGEEQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNL 227
           F VYVGE +K+RFV+P+S +NQPSFQ LLS+AEEEFGY+H MGG+TIPCR+D F++L
Sbjct: 181 FPVYVGESEKQRFVVPISIVNQPSFQGLLSEAEEEFGYDHQMGGLTIPCRQDTFIDL 237

[Close]

BLAST of ClCG02G004412 vs. ExPASy TrEMBL
Match: A0A7N2MY43 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.6e-60
Identity = 121/229 (52.84%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 1   MGFRLPKIVHVKQSLRRSSSTGNGAS--AVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPT 60
           M  RLP I+H K  LRRS+S     S  ++DVPKG+ T+YVGE +++RFVIP+++LNQP+
Sbjct: 1   MAIRLPSIMHAKHILRRSNSFRKKVSSPSIDVPKGYITIYVGESERRRFVIPLTFLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDLTQSHVIWIHKQRVLPYSNSQKKLQSSN 120
           FQ+LLS+AEEEFG+DHPMGG+TIPCSEEIF+DLT                          
Sbjct: 61  FQELLSKAEEEFGFDHPMGGLTIPCSEEIFIDLT-------------------------- 120

Query: 121 FLSGSHISNLGTYYNMGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEEQ 180
                  S+L  +  M  RLP I+ AK  L+RS+S G   +   +DVPKGY  VYVGE +
Sbjct: 121 -------SHLYEFNTMVIRLPGIMNAKHILRRSNSFGKQVASTPIDVPKGYIAVYVGESE 180

Query: 181 KKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLT 228
           K+RFVIP+S+LNQPSF  LLS+AEEEFGY+H MGG+TIPC E+ F++LT
Sbjct: 181 KRRFVIPISFLNQPSFLTLLSKAEEEFGYDHPMGGLTIPCSENIFIDLT 196

[Close]

BLAST of ClCG02G004412 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.4 bits (311), Expect = 1.2e-28
Identity = 57/94 (60.64%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1  MGFRLPKIVH-VKQSLRRSS--STGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQP 60
          M  R+P+++   KQ LR++   S+ + +S++DVPKG+  VYVGE   KRFV+P+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 TFQDLLSQAEEEFGYDHPMGGITIPCSEEIFLDL 92
          +FQDLL +AEEEFG+DHPMGG+TIPCSEEIF+DL
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDL 94

[Close]

BLAST of ClCG02G004412 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-24
Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 18 SSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPTFQDLLSQAEEEFGYDHPMG 77
          S STG G++A   PKGF  VYVGE QKKR+++P+SYLNQP+FQ LLS++EEEFG+DHPMG
Sbjct: 15 SRSTGAGSAA---PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 74

Query: 78 GITIPCSEEIFLDLT 93
          G+TIPC E+ F+++T
Sbjct: 75 GLTIPCPEDTFINVT 86

[Close]

BLAST of ClCG02G004412 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 4.0e-24
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0


Query: 134 MGFRLPRIVTAKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE--EQKKRFVIPLSYLNQ 193
           M  RL R++ +KQS ++ S            VPKG+  VYVGE  E KKRFV+P+SYLN 
Sbjct: 1   MAIRLSRVINSKQSQKQQSR-----------VPKGHVAVYVGEEMESKKRFVVPISYLNH 60

Query: 194 PSFQDLLSQAEEEFGYNHLMGGITIPCREDEFLNLTQSW 231
           PSFQ LLS+AEEEFG+NH +GG+TIPCRE+ F+ L  S+
Sbjct: 61  PSFQGLLSRAEEEFGFNHPIGGLTIPCREETFVGLLNSY 88

[Close]

BLAST of ClCG02G004412 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 8.9e-24
Identity = 48/85 (56.47%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 8  IVHVKQSLRRSSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPTFQDLLSQAE 67
          ++  K+ L RS++  + A     PKGF  VYVGE QKKR+++P+SYLNQP+FQ LLS++E
Sbjct: 7  LLGAKKILSRSTTAASAA-----PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSE 66

Query: 68 EEFGYDHPMGGITIPCSEEIFLDLT 93
          EEFG+DHPMGG+TIPC E+ F+++T
Sbjct: 67 EEFGFDHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of ClCG02G004412 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.3 bits (264), Expect = 3.4e-23
Identity = 47/85 (55.29%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 8  IVHVKQSLRRSSSTGNGASAVDVPKGFFTVYVGEVQKKRFVIPMSYLNQPTFQDLLSQAE 67
          ++  K+ L RS++  + A     PKGF  VYVGE QKKR+++P+SYLNQP+FQ LLS++E
Sbjct: 7  LLGAKKILSRSTAAVSAA-----PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSE 66

Query: 68 EEFGYDHPMGGITIPCSEEIFLDLT 93
          +EFG+DHPMGG+TIPC E+ F+++T
Sbjct: 67 DEFGFDHPMGGLTIPCHEDTFINVT 86

The following BLAST results are available for this feature:

BLAST of ClCG02G004412 vs. NCBI nr


Match Name	E-value	Identity	Description
BBH09288.1	2.8e-64	59.39	SAUR-like auxin-responsive protein family, partial [Prunus dulcis]	[more]
RXH85432.1	5.0e-61	53.44	hypothetical protein DVH24_002530 [Malus domestica]	[more]
KAA0049693.1	6.5e-61	55.02	auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYK12179.1 auxi...	[more]
RXI00424.1	2.5e-60	52.74	hypothetical protein DVH24_037972 [Malus domestica]	[more]
KAF8406542.1	5.5e-60	54.08	hypothetical protein HHK36_008630 [Tetracentron sinense]	[more]

BLAST of ClCG02G004412 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	4.9e-27	60.20	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	2.1e-25	63.04	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	4.6e-25	60.20	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	6.0e-25	59.18	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	7.8e-25	63.04	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of ClCG02G004412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y1RZK4	1.4e-64	59.39	SAUR-like auxin-responsive protein family (Fragment) OS=Prunus dulcis OX=3755 GN...	[more]
A0A498IU46	2.4e-61	53.44	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_002530 PE=3 SV=1	[more]
A0A5D3CPE1	3.2e-61	55.02	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A498K299	1.2e-60	52.74	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037972 PE=3 SV=1	[more]
A0A7N2MY43	4.6e-60	52.84	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of ClCG02G004412 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	1.2e-28	60.64	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.3e-24	65.33	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	4.0e-24	54.55	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	8.9e-24	56.47	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	3.4e-23	55.29	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 148..227 e-value: 4.3E-23 score: 81.3 coord: 17..92 e-value: 1.5E-23 score: 82.8
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 144..229
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 11..94
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 144..229
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 11..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G004412.1	ClCG02G004412.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin