ClCG02G004411 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G004411
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Auxin-responsive protein
Location	CG_Chr02: 4487046 .. 4488838 (+)
RNA-Seq Expression	ClCG02G004411
Synteny	ClCG02G004411

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATTCTTCAGCTTCTTCGACGACCTTCCACCTCAACAAAGGAAGGAGTTGCAGTAGTTCCAAAGGGCTACTGTGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTATCATCCCTGTAACGTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAATCTGAAGAAGAATTTGGTTATTATCATCCTATGGGTGGTCTTACCATTCAGTGCAGAGAAGATATCTTCACCAATCTCATTTCTCAGTTAAATAGGCCATGAGAGAGGCACTGACATAATTGTAAAATTCAATCTTTTAGATCAAGGATATTAGGCATGATCAGATCCATGCACCCTTTTGTTTTTCCCTTTCAAACTTGCTCCAATTTTTTGTTTCCTTCATGGGAAGAAAATGTTTCCCTACATAAGGAAATTGTTTCTGGATGCAATTTTACTGGAATCTAAGTGTCTGCCAGAAGTTCTTTCTTCATTTTATTTCTTGCTAATGGCCCTTTTATCTATTTATACTTTTTGTTAAATATTTGTACTATCCACCATCCATTTAATACCTATAGCATTCCATTAGCTATAATGTAGTCATATTTAACTCTATACTTATTCTTTATTTCAAAAATGTTTTTGTACAATAATCCGAGTGGTGATTGGTTGATCTATAATAATTATGCATCATAGGAGTTTGAGATTCGATATTTGTTATGAAGATTGGTTTCTAGTTTAATATAACCGAGTTCTCTTTCAGTTGCATCAGTGCCATTTTTTTCAAGATACAGAATGTTGAAGAAAAGTCTCAAAGGGAGAAAAGGAAAAGAAACAAATAACAATTTGTGATTGACAAAAAGCCTTAAGCTAATGGGTGAAGGTAAATTCAATATTATATCATGTAACACTTTTCCTCCCTTGTGGGCTTGGAATATGTAGAAGACCCAACAAGTGGAAACCAATATTAATTGGGGAGGATATAACATTGCAGGGGTTTGAACACATGACCTCCTACATGACTTGCGTTGGTACCATGTTAATATTATACCATATTACATGATCATATTAAATTTACCTTCACCCATTAACACAAGTGTTTGGGTCAATTAGTGATTTAACAAAATAGCTAGCCAACAAAAAGAAAGGCCAAAACAGAAGCCACCAAGAAAGACAGACACCTTAAGCATCCCAACAAAATAAAAGGTTTAACAACGGGGTTTCTTTTCCTTTGTTATCTAGTACTTGAAGTATTTTCTTGCACTTCCAAGGTTCTGATGTACTACGGGTAGTATGACTTTTCCGACCTCTGCAACTATGAACAACCGACAAAAATCCTACTTTAGTTGAAACCCTTCTATGACGAAAAAATGTGACAGACATGGCTATATGATGCAGTTAAATTTTCTGTCAACATACTAGTCTCTGTCAATTGTTATCTTACCGGGATGTTTTGAGTGCCCCTAATATGTCTATGAATCTACTGGAATTTGCTTAGTTGTATTGAATTCTCTTCTCAATATTAGTCCATAAACAAAAGTAGGCCAGCTATGATGTTTCTACATAAGGATCCATAATGGCCCATGTAACTCATGAACTTGAAATTCTCATATTATGGCTTGAAAGACAAATCCATGTGATTGTTTTTGAGCTACTTTCTTTCTAGCATTGAATGCAACCTTCTGCCTTGTCAATATTTCTGTCTCCGAAAAATCTCACCCTCCATTTATATAAATGGTCATGTAATTGGGTTCACAAGCAAGTCTTTCACTTCACAAGAAAACTCCTTTGATAATACTTCAAGTTAA

mRNA sequence

ATGAGAATTCTTCAGCTTCTTCGACGACCTTCCACCTCAACAAAGGAAGGAGTTGCAGTAGTTCCAAAGGGCTACTGTGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTATCATCCCTGTAACGTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAATCTGAAGAAGAATTTGGTTATTATCATCCTATGGGTGGTCTTACCATTCAGTGCAGAGAAGATATCTTCACCAATCTCATTTCTCACATTGAATGCAACCTTCTGCCTTGTCAATATTTCTGTCTCCGAAAAATCTCACCCTCCATTTATATAAATGGTCATGTAATTGGGTTCACAAGCAAGTCTTTCACTTCACAAGAAAACTCCTTTGATAATACTTCAAGTTAA

Coding sequence (CDS)

ATGAGAATTCTTCAGCTTCTTCGACGACCTTCCACCTCAACAAAGGAAGGAGTTGCAGTAGTTCCAAAGGGCTACTGTGCGGTCTATGTTGGAGAGATCCAAAAGAAGCGTTTTATCATCCCTGTAACGTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAATCTGAAGAAGAATTTGGTTATTATCATCCTATGGGTGGTCTTACCATTCAGTGCAGAGAAGATATCTTCACCAATCTCATTTCTCACATTGAATGCAACCTTCTGCCTTGTCAATATTTCTGTCTCCGAAAAATCTCACCCTCCATTTATATAAATGGTCATGTAATTGGGTTCACAAGCAAGTCTTTCACTTCACAAGAAAACTCCTTTGATAATACTTCAAGTTAA

Protein sequence

MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGLTIQCREDIFTNLISHIECNLLPCQYFCLRKISPSIYINGHVIGFTSKSFTSQENSFDNTSS

Homology

[Close]

BLAST of ClCG02G004411 vs. NCBI nr
Match: KAG6572089.1 (Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39
Identity = 79/86 (91.86%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MR+LQLLRRPSTSTKEGV VVPKGYCAVYVGEIQKKRF+IPVTYLNQPCFQDLLSQ+E+E
Sbjct: 1  MRLLQLLRRPSTSTKEGVTVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQDLLSQAEQE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTIQCREDIFTNLIS +
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQL 86

[Close]

BLAST of ClCG02G004411 vs. NCBI nr
Match: KGN43209.1 (hypothetical protein Csa_020258 [Cucumis sativus])

HSP 1 Score: 169.5 bits (428), Expect = 2.0e-38
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MRILQLLRR STSTKEGVAVVPKGYCAVYVGEIQKKRF+IP+TYLNQPCFQ LLSQ+EEE
Sbjct: 1  MRILQLLRRASTSTKEGVAVVPKGYCAVYVGEIQKKRFVIPITYLNQPCFQILLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTIQCREDIFTNLIS +
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQL 86

[Close]

BLAST of ClCG02G004411 vs. NCBI nr
Match: XP_016900447.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa] >TYK12170.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 158.7 bits (400), Expect = 3.5e-35
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MRILQLLRR S   KEGVAVVPKGYCAVYVGEIQKKRF+IPVTYLNQPCFQ LLSQ+EEE
Sbjct: 1  MRILQLLRRAS---KEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTIQCREDIFTNLIS +
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQL 83

[Close]

BLAST of ClCG02G004411 vs. NCBI nr
Match: XP_022136192.1 (auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 5.3e-28
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          M + QLL+R      +GV+ VPKGYCAVYVGE QKKRF+IP++YLNQPCFQ+LL Q+EEE
Sbjct: 1  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTI CR+DIFT+LIS +
Sbjct: 61 FGYYHPMGGLTIHCRDDIFTDLISRL 81

[Close]

BLAST of ClCG02G004411 vs. NCBI nr
Match: XP_011658582.1 (auxin-responsive protein SAUR24 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 9.1e-28
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MR++ LL+R      +GV+ +PKGYCAVYVGE QKKRFIIP++YLNQPCFQ+LLSQ+EEE
Sbjct: 1  MRLIHLLKR-----SQGVSSIPKGYCAVYVGESQKKRFIIPISYLNQPCFQELLSQTEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGY+HPMGGLTI C++ IFTNLIS +
Sbjct: 61 FGYHHPMGGLTIHCKDAIFTNLISRL 81

[Close]

BLAST of ClCG02G004411 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-22
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 11 STSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGL 70
          S ST  G A  PKG+ AVYVGE QKKR+++PV+YLNQP FQ LLS+SEEEFG+ HPMGGL
Sbjct: 15 SRSTGAGSA-APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGL 74

Query: 71 TIQCREDIFTNLISHIE 88
          TI C ED F N+ S ++
Sbjct: 75 TIPCPEDTFINVTSRLQ 90

[Close]

BLAST of ClCG02G004411 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          +R L + ++  + +   V+  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS+SEEE
Sbjct: 4  VRSLLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 63

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FG+ HPMGGLTI C ED F N+ S +
Sbjct: 64 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of ClCG02G004411 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 11 STSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGL 70
          S ST  G A  PKG+ AVYVGE QKKR+++P++YL+QP FQ LLS+SEEEFG+ HPMGGL
Sbjct: 15 SRSTAAGSA-APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGL 74

Query: 71 TIQCREDIFTNLISHIE 88
          TI C ED F N+ S ++
Sbjct: 75 TIPCPEDTFINVTSRLQ 90

[Close]

BLAST of ClCG02G004411 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 5  QLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYY 64
          ++L R +T+     +  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS+SEEEFG+ 
Sbjct: 12 KILSRSTTA----ASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 71

Query: 65 HPMGGLTIQCREDIFTNLISHIE 88
          HPMGGLTI C ED F N+ S  +
Sbjct: 72 HPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of ClCG02G004411 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 18 VAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGLTIQCRED 77
          V+  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS+SE+EFG+ HPMGGLTI C ED
Sbjct: 21 VSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHED 80

Query: 78 IFTNLISHIE 88
           F N+ S ++
Sbjct: 81 TFINVTSRLQ 90

[Close]

BLAST of ClCG02G004411 vs. ExPASy TrEMBL
Match: A0A0A0K2F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009050 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 9.5e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MRILQLLRR STSTKEGVAVVPKGYCAVYVGEIQKKRF+IP+TYLNQPCFQ LLSQ+EEE
Sbjct: 1  MRILQLLRRASTSTKEGVAVVPKGYCAVYVGEIQKKRFVIPITYLNQPCFQILLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTIQCREDIFTNLIS +
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQL 86

[Close]

BLAST of ClCG02G004411 vs. ExPASy TrEMBL
Match: A0A5D3CL76 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001100 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-35
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MRILQLLRR S   KEGVAVVPKGYCAVYVGEIQKKRF+IPVTYLNQPCFQ LLSQ+EEE
Sbjct: 1  MRILQLLRRAS---KEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTIQCREDIFTNLIS +
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQL 83

[Close]

BLAST of ClCG02G004411 vs. ExPASy TrEMBL
Match: A0A1S4DWU0 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC107990908 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.7e-35
Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MRILQLLRR S   KEGVAVVPKGYCAVYVGEIQKKRF+IPVTYLNQPCFQ LLSQ+EEE
Sbjct: 1  MRILQLLRRAS---KEGVAVVPKGYCAVYVGEIQKKRFVIPVTYLNQPCFQVLLSQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTIQCREDIFTNLIS +
Sbjct: 61 FGYYHPMGGLTIQCREDIFTNLISQL 83

[Close]

BLAST of ClCG02G004411 vs. ExPASy TrEMBL
Match: A0A0A0K4K1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-28
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          MR+  LL+R      +GV+ VPKGYCAVYVGE QKKRF+IP+TYLN+PCFQ LL Q+EEE
Sbjct: 1  MRLQHLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPITYLNRPCFQQLLCQTEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTI CR+DIFT+LIS++
Sbjct: 61 FGYYHPMGGLTIHCRDDIFTDLISNM 81

[Close]

BLAST of ClCG02G004411 vs. ExPASy TrEMBL
Match: A0A6J1C4W2 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007947 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.6e-28
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          M + QLL+R      +GV+ VPKGYCAVYVGE QKKRF+IP++YLNQPCFQ+LL Q+EEE
Sbjct: 1  MGLRQLLKR-----NQGVSAVPKGYCAVYVGESQKKRFVIPISYLNQPCFQELLCQAEEE 60

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FGYYHPMGGLTI CR+DIFT+LIS +
Sbjct: 61 FGYYHPMGGLTIHCRDDIFTDLISRL 81

[Close]

BLAST of ClCG02G004411 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-23
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 11 STSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGL 70
          S ST  G A  PKG+ AVYVGE QKKR+++PV+YLNQP FQ LLS+SEEEFG+ HPMGGL
Sbjct: 15 SRSTGAGSA-APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGL 74

Query: 71 TIQCREDIFTNLISHIE 88
          TI C ED F N+ S ++
Sbjct: 75 TIPCPEDTFINVTSRLQ 90

[Close]

BLAST of ClCG02G004411 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.0 bits (258), Expect = 9.4e-23
Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 1  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEE 60
          +R L + ++  + +   V+  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS+SEEE
Sbjct: 4  VRSLLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 63

Query: 61 FGYYHPMGGLTIQCREDIFTNLISHI 87
          FG+ HPMGGLTI C ED F N+ S +
Sbjct: 64 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of ClCG02G004411 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 11 STSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGL 70
          S ST  G A  PKG+ AVYVGE QKKR+++P++YL+QP FQ LLS+SEEEFG+ HPMGGL
Sbjct: 15 SRSTAAGSA-APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMGGL 74

Query: 71 TIQCREDIFTNLISHIE 88
          TI C ED F N+ S ++
Sbjct: 75 TIPCPEDTFINVTSRLQ 90

[Close]

BLAST of ClCG02G004411 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 5  QLLRRPSTSTKEGVAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYY 64
          ++L R +T+     +  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS+SEEEFG+ 
Sbjct: 12 KILSRSTTA----ASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFD 71

Query: 65 HPMGGLTIQCREDIFTNLISHIE 88
          HPMGGLTI C ED F N+ S  +
Sbjct: 72 HPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of ClCG02G004411 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 18 VAVVPKGYCAVYVGEIQKKRFIIPVTYLNQPCFQDLLSQSEEEFGYYHPMGGLTIQCRED 77
          V+  PKG+ AVYVGE QKKR+++P++YLNQP FQ LLS+SE+EFG+ HPMGGLTI C ED
Sbjct: 21 VSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHED 80

Query: 78 IFTNLISHIE 88
           F N+ S ++
Sbjct: 81 TFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of ClCG02G004411 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572089.1	1.8e-39	91.86	Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KGN43209.1	2.0e-38	91.86	hypothetical protein Csa_020258 [Cucumis sativus]	[more]
XP_016900447.1	3.5e-35	89.53	PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0049702.1 auxin-ind...	[more]
XP_022136192.1	5.3e-28	70.93	auxin-responsive protein SAUR24-like [Momordica charantia]	[more]
XP_011658582.1	9.1e-28	69.77	auxin-responsive protein SAUR24 [Cucumis sativus]	[more]

BLAST of ClCG02G004411 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	3.5e-22	64.94	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF6	1.3e-21	54.65	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
Q9FJG1	1.7e-21	62.34	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
Q9FJG0	1.7e-21	56.63	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.7e-21	62.86	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]

BLAST of ClCG02G004411 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2F9	9.5e-39	91.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009050 PE=3 SV=1	[more]
A0A5D3CL76	1.7e-35	89.53	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4DWU0	1.7e-35	89.53	auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC107990908 PE=3 SV=1	[more]
A0A0A0K4K1	2.6e-28	70.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009080 PE=3 SV=1	[more]
A0A6J1C4W2	2.6e-28	70.93	auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of ClCG02G004411 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18080.1	2.5e-23	64.94	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	9.4e-23	54.65	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	1.2e-22	62.34	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.2e-22	56.63	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	1.2e-22	62.86	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..84 e-value: 8.4E-23 score: 80.4
None	No IPR available	PANTHER	PTHR31929:SF40	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 5..85
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 5..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G004411.1	ClCG02G004411.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin