ClCG02G004400 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG02G004400
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAuxin responsive SAUR protein
LocationCG_Chr02: 4467446 .. 4470201 (-)
RNA-Seq ExpressionClCG02G004400
SyntenyClCG02G004400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGTGTAGTCTATGTTGGAGAAAGCCAAAAGAATCGGTTCGTGATCCCGATAACTTACTTGAATCAACCACGTTTTCAGGAGTTGCTTTGCCAAACTGAAGAAGAATTTGGTTATCATCATCCTATGGGTGGTCTTACTATTCATTGCAGAGATGACATTTTTATTGATCTCATTTCTCATATGAATGATCTATGAGAGATGCACTGAAATCTGTAGCATGTAATCAATCTTGTGGAATAGGAACATTAGAAATAACCAAAACCATGTACATTTTTTTCATTTTCCTTCTTTTTTGTTTGCTTGTGATGGGATTAAAAGAATGTTTCCCTACATTAAGGAAATTACCAGTGATGGAAATGAAATTGTCACAACTTTACTAGAAATTGAAGAGGTTTCTTACTTCAAAAAGTATTTTCTTTGTTTCTTGGTTAAGCTCTCTTCTCTGTTTATATAAATTACATGGATTCATCTTAATTTTCAAGAGCTTGAGCATTCACAGAAAAGATGCAAAACCATTTATATTGACTCTTTTTTGGGCTTGATTGCATCAAACAAGCATCTGTAAGGTTATAATAACAAAAAACTTGATCAAGAGATTTTATTGGTATATAATATCTATTAATCATAATCAATGGTAGGCCATGATTGGCCTTCTATGAGGATGCTGTATAGTCATATAACCAAATGCTTTTCTCAGTTCTAAGATCAGGTAGGAAGACAATAATGTTTGTGTTAGTTTTCATCCTTCTGCCTTGTAACTCTTTTTCTTGCCTTCCAGCTATAAATGGTAAACATATTATTGAATCTCAGGTAAAACAAAGTGCTCCCAGTAACTCACAAACAAAAGGGAACTGATTATATCGTACAAATATGGGGCTTCTCCATCTTCTTAAAAGAAACCAAGGAGTTTCAACGGTTCATAAGGGTTTGTGCGGTCTATGTCGGAGAGAGCCAAAAGAAACGGTTCATGATTTCAATAACTTACTTGAATCAACCATCTTTTCTAGAGTTGCTTTGTCGGTTTGAAGAAGAATTTGGTTACCAGCATGCTATGGGTGGTCTTACTATTACTATTCATTGCAGAGACCACATTTTCACCAATATCATATCCCATTTTGAATGATTTATGAGAGATGCACTGACATCTACAATATACAACCAATATACTTCTCTTCTTTTCTTCAACAGACCAACTACATGGATGAATTTTTAGTTTTTAGTCGATGCAGAAAAGATGCTACGTCATTCATATCGATTCGTTTTGGTTGAATCAATCATTTTTAAACTGTACTTGAACTAATAACTTCACAACTAGTATTTGATTTCAGAAATATCTGAAACAGTTATCCTCTATTCCTTTATTTTCTTATATAGCTTCACCAATTGATCAATTCAAGCAGAAGCTAAGATGTATCCAAAAATTTTTAGAGTTCTTTTTCATTTCCTATTATGAATGGATCATGAAGAAGGAGAGCCAAAGTTCAAAATCTGTATGAGAGAGTTTCTTTGATAAAACTGCTCAGAGATGCTTCTAGAGAGTACAACCATGGCGACCTGTTAGTTTCCTTAAGAGCTAGATTTTCTTAAGATTCAAAATGGACAGAAAAGTAGTGTACGACAATATTGTCTTTCCTCAGGTTTCTTGGAGAAGATCATCATACATTTATTATTATTTATAGTTTGAAGTGCTTGAAACTTGGACTCCTAACTCTACCAATTCACATATGCTAGGGGCAGTCCTAATTTTCCTTCTCTAAAGCCTTCACTGGTCTAGCACCTCCATGTTATATAGTCTAGGAATGATCTATATTAATGTTGTTAGGGACAACAAACCTCCAAATATCTCCACGATATGGTATGATATTGTCCACTTTGGACATAACCCTCGTGGTTTTATTTTTTGTTTCACCCAAAAGGTCTCATACCATTGGAGATAGTTGTCGTCTCTTATAAACCCATGATCATCCCTTTATTTAACCGATGTGGGACTTTGATCGCATTCCAGTCCAACAAATGCTATCTTCCATATGATGGGATTAGACAGTAGGGTAAAGCTGCAAGGCAATCTACATGTGAAAGTGAGCCCACTGACTTGTTATCTGCTTGTTTAGGTCTGACTGATGAAGATCAACACCTAAACTTCCAACATTCATATATATTTCATTAAACTTCAGCTAGCAGGCAAAGCCATGTGGTTCACTCTTACCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTGTTGCTTAAGAGTTAAGAGGCACTAAAATATTTCGTCTGTGTATATATAGAAGCAGATCCTAATGAAGTTCTCACCATATTTCCATATTGTGTTCTATCTTCCATTCAAACATAACTTGAAACAAGACTTGCAGCATCAGTATAACACACAGTTTGCCATCATGGGAATTCGTCTACCTGGTGTTGTTAATGCCAAACAAATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACCCAAAGTTTGAACGGCTCATGA

mRNA sequence

ATGGGGCTTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGTGTAGTCTATGTTGGAGAAAGCCAAAAGAATCGGTTCGTGATCCCGATAACTTACTTGAATCAACCACGTTTTCAGGAGTTGCTTTGCCAAACTGAAGAAGAATTTGGTTATCATCATCCTATGGGTGCCAAAGTTCAAAATCTGTATGAGAGAGTTTCTTTGATAAAACTGCTCAGAGATGCTTCTAGAGAGTACAACCATGGCGACCTTCCAACAAATGCTATCTTCCATATGATGGGATTAGACAGTAGGGTAAAGCTGCAAGGCAATCTACATGTGAAAGCAAAGCCATGTGGTTCACTCTTACCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTAAGCAGATCCTAATGAAGTTCTCACCATATTTCCATATTGTGTTCTATCTTCCATTCAAACATAACTTGAAACAAGACTTGCAGCATCAGTATAACACACAGTTTGCCATCATGGGAATTCGTCTACCTGGTGTTGTTAATGCCAAACAAATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACCCAAAGTTTGAACGGCTCATGA

Coding sequence (CDS)

ATGGGGCTTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGTGTAGTCTATGTTGGAGAAAGCCAAAAGAATCGGTTCGTGATCCCGATAACTTACTTGAATCAACCACGTTTTCAGGAGTTGCTTTGCCAAACTGAAGAAGAATTTGGTTATCATCATCCTATGGGTGCCAAAGTTCAAAATCTGTATGAGAGAGTTTCTTTGATAAAACTGCTCAGAGATGCTTCTAGAGAGTACAACCATGGCGACCTTCCAACAAATGCTATCTTCCATATGATGGGATTAGACAGTAGGGTAAAGCTGCAAGGCAATCTACATGTGAAAGCAAAGCCATGTGGTTCACTCTTACCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTAAGCAGATCCTAATGAAGTTCTCACCATATTTCCATATTGTGTTCTATCTTCCATTCAAACATAACTTGAAACAAGACTTGCAGCATCAGTATAACACACAGTTTGCCATCATGGGAATTCGTCTACCTGGTGTTGTTAATGCCAAACAAATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACCCAAAGTTTGAACGGCTCATGA

Protein sequence

MGLRHLLKRNQGVSAVPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYERVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPLSFTGPNWLISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS
Homology
BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF8406545.1 (hypothetical protein HHK36_008633 [Tetracentron sinense])

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-44
Identity = 119/292 (40.75%), Postives = 157/292 (53.77%), Query Frame = 0

Query: 4   RHLLKRNQGVSAVPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMG 63
           R L+     +  VPKG+  VYVGESQK RFV+P++YL  P FQ+LL + EEEFG+HHPMG
Sbjct: 21  RSLIPTRYHLLEVPKGHFAVYVGESQKKRFVVPLSYLKHPLFQDLLSRAEEEFGFHHPMG 80

Query: 64  AKVQNLYERVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQG--NLHVKAKPCGS 123
                  E    I L    +R    G      + H   +   +KLQ     H+   P  +
Sbjct: 81  GLTIPCNED-DFIHLTSHLNRLIVMGIRLPLMVLHAKHI---LKLQSIPKNHISLAPTST 140

Query: 124 LLPLS------------FTGPNWLISSPPLKQILMKFSPYFHIVF-----YLPFKHNLKQ 183
            +               F  P   ++ P  + +L      F   +      +P K     
Sbjct: 141 DVSKGHFAVYVGEKQKRFEVPISYLNHPSFQDLLSCAEEEFGFDYPKGGLTIPCKEATFI 200

Query: 184 DLQHQYNTQFAIMGIRLPGVVNAKQILQ--WIHRSSDA-----IPKGHLAVYVGEAQRRR 243
           DL  + N     MGI LPG+V+AKQIL+   ++ +  A     +PKGH  VYVGE Q++R
Sbjct: 201 DLTSRLNAS-KTMGIHLPGIVHAKQILRRSLLNANQSASMAADVPKGHFTVYVGETQKKR 260

Query: 244 FVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 270
           FVVP+SYL+ PSFQ LLS AE+EFGF HPMGGLTIPC+E+AF+NLT  LN S
Sbjct: 261 FVVPISYLNQPSFQDLLSCAEDEFGFDHPMGGLTIPCKEDAFINLTSRLNSS 307

BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF4381387.1 (hypothetical protein G4B88_029742 [Cannabis sativa])

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-42
Identity = 109/254 (42.91%), Postives = 141/254 (55.51%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYER--V 75
           VPKGY  VYVG+++  RFVIP++YLN   FQELLCQ EEEFG+ HPMGA      E   +
Sbjct: 111 VPKGYLAVYVGKNKMTRFVIPVSYLNHSSFQELLCQAEEEFGFDHPMGALTIPCTEDAFI 170

Query: 76  SLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPLSFTGPNWL 135
           +L+  L     E            H + L S +K +    +++K     + L       +
Sbjct: 171 NLVSSLNIGVFEET----------HQVSLRSLLKSRNGARLESK-----IGLE------V 230

Query: 136 ISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVVNAKQILQW 195
           +S  P + +  K S         P                  IMG R PGVV+AKQ++Q 
Sbjct: 231 LSDFPHQSLERKLSDQKLSALLRP-----------------TIMGFRFPGVVHAKQLIQR 290

Query: 196 IHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIP 255
              S+  +PKG+LAVYVG+ +  RFV+PVSYL+H SFQ LL QAEEEFGF HPMG LTIP
Sbjct: 291 PFSSAKDVPKGYLAVYVGKNKMTRFVIPVSYLNHSSFQELLCQAEEEFGFDHPMGALTIP 326

Query: 256 CREEAFLNLTQSLN 268
           C E+ F+NL  SLN
Sbjct: 351 CSEDTFINLVSSLN 326

BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF4348003.1 (hypothetical protein G4B88_026823 [Cannabis sativa])

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-42
Identity = 115/264 (43.56%), Postives = 149/264 (56.44%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYE---- 75
           VPKGY  VYVG+++  RF+IP++YLN   FQELLCQ EEEFG+ HPMGA      E    
Sbjct: 157 VPKGYLAVYVGKNKMTRFIIPVSYLNNSSFQELLCQAEEEFGFDHPMGALTIPCSEDTFI 216

Query: 76  ------RVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPL 135
                  +  + +L+  S      D+    +F     +S   +  N +V  K CG+L+  
Sbjct: 217 NLVSSLNIKAMSVLQITSSVQLRCDI-NEDVFTARNCESTHWMSTNDYVN-KECGNLMN- 276

Query: 136 SFTGPNWLISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVV 195
            F     + SS    Q+L   S            H L      + +T   IMG R PGVV
Sbjct: 277 EFCDNVHIGSS--ASQLLTTSSTL--------SLHFLPSSTLRETST---IMGFRFPGVV 336

Query: 196 NAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHH 255
           +AKQ++Q    S+  IPKG+LAVYVG+++  RFV+PVSYL+  SFQ LL QAEEEFGF H
Sbjct: 337 HAKQLIQRPFSSAKDIPKGYLAVYVGKSKMTRFVIPVSYLNSSSFQELLCQAEEEFGFDH 396

Query: 256 PMGGLTIPCREEAFLNLTQSLNGS 270
           PMG LTIPC EE F+NL   +NGS
Sbjct: 397 PMGALTIPCSEETFINL---MNGS 401

BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF7143766.1 (hypothetical protein RHSIM_Rhsim05G0066100 [Rhododendron simsii])

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-42
Identity = 116/277 (41.88%), Postives = 147/277 (53.07%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYERVSL 75
           VPKG+  VYVGES+K RFVIPI+YLN P FQ+LL Q EEEFG+ HPMG            
Sbjct: 25  VPKGHFAVYVGESEKKRFVIPISYLNNPSFQDLLSQAEEEFGFDHPMGG----------- 84

Query: 76  IKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPLSF------TG 135
              L    RE    DL +                G    K    G + P+         G
Sbjct: 85  ---LTIPCREDTFIDLASQF--------------GEKTHKVSSHGYVFPIEMKDGDNGVG 144

Query: 136 PNWLISSPPLKQI--LMKFSPYFHIV--FYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVV 195
              ++S  P +QI  L KF    HI+  F+LP               Q   M IR+P ++
Sbjct: 145 MCSVVSVKPTQQIHPLTKFQLVLHILHFFFLPVNRIY----------QLKTMAIRMPWIM 204

Query: 196 NAKQILQWIHRSSDA-------------IPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQT 255
           +AKQ+L+   RSS A             +PKGH AVY+GE++++RFV+PVSYL+ PSFQ 
Sbjct: 205 HAKQVLR---RSSLAAANKAASSSSPTDVPKGHFAVYIGESEKKRFVIPVSYLNSPSFQD 260

Query: 256 LLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 270
           LL Q EEE+GFHH MGGLTIPC E+ F++LT  L GS
Sbjct: 265 LLGQVEEEYGFHHAMGGLTIPCSEDVFIDLTARLGGS 260

BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF7810819.1 (Auxin responsive SAUR protein [Senna tora])

HSP 1 Score: 182.6 bits (462), Expect = 4.6e-42
Identity = 109/260 (41.92%), Postives = 147/260 (56.54%), Query Frame = 0

Query: 10  NQGVSAVPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNL 69
           ++GV+ VPKGY  VYVGE  K RFVIPI+YLNQP FQ+LL Q EEEFGYHHPMG      
Sbjct: 21  SKGVNYVPKGYIAVYVGEKMK-RFVIPISYLNQPSFQDLLSQAEEEFGYHHPMGGLTFPC 80

Query: 70  YERVS--LIKLLRDAS----REYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLL 129
            E +   L  L R +S      ++     +NA+    G  +       ++V  K    ++
Sbjct: 81  TEAMGFRLPGLTRTSSCIRRTSFSSNQSASNAVEVPKGYLA-------VYVGQKMKRFVI 140

Query: 130 PLSFTGPNWLISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPG 189
           P+S+      ++ P  +++L +    F                   Y+     MG RLPG
Sbjct: 141 PVSY------LNQPSFQELLSQAEEEF------------------GYDHPMKTMGFRLPG 200

Query: 190 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 249
           +  A      +      +PKG+LAVYVGE + +RFV+P+SYL+ PSFQ LLSQAEEEFG+
Sbjct: 201 IRRASLSSNHVSSKGFDVPKGYLAVYVGE-KMKRFVIPISYLNQPSFQDLLSQAEEEFGY 247

Query: 250 HHPMGGLTIPCREEAFLNLT 264
            HPMGGLTIPC+E+AF N+T
Sbjct: 261 DHPMGGLTIPCKEDAFENIT 247

BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0

Query: 184 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 243
           ++ AK+IL     +  A PKG LAVYVGE+Q++R++VP+SYLS PSFQ LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 66

Query: 244 HHPMGGLTIPCREEAFLNLTQSL 267
            HPMGGLTIPC E+ F+N+T  L
Sbjct: 67  AHPMGGLTIPCPEDTFINVTSRL 89

BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0

Query: 184 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 243
           ++ AK+IL     +  A PKG LAVYVGE+Q++R++VPVSYL+ PSFQ LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 244 HHPMGGLTIPCREEAFLNLTQSL 267
            HPMGGLTIPC E+ F+N+T  L
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRL 89

BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-23
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0

Query: 177 MGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQ 236
           MG RLPG+             S  +PKG+L VYVG+ + RRF++PVSYL+ PSFQ LL+Q
Sbjct: 1   MGFRLPGIRKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPSFQDLLNQ 60

Query: 237 AEEEFGFHHPMGGLTIPCREEAFLNLTQSLN 268
           AEEEFG+ HPMGGLTIPC+E+ FL +T  LN
Sbjct: 61  AEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0

Query: 184 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 243
           ++ AK+IL     ++ A PKG LAVYVGE+Q++R++VP+SYL+ PSFQ LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 66

Query: 244 HHPMGGLTIPCREEAFLNLT 264
            HPMGGLTIPC E+ F+N+T
Sbjct: 67  DHPMGGLTIPCPEDTFINVT 86

BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0

Query: 177 MGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQ 236
           MG RLPG+  A          +  + KG+LAVYVGE + RRFV+PVSYL+ PSFQ LLSQ
Sbjct: 1   MGFRLPGIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQ 60

Query: 237 AEEEFGFHHPMGGLTIPCREEAFLNLTQSLN 268
           AEEEFG+HHP GGLTIPC E+ F ++T  LN
Sbjct: 61  AEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6GEY8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029742 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.9e-43
Identity = 109/254 (42.91%), Postives = 141/254 (55.51%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYER--V 75
           VPKGY  VYVG+++  RFVIP++YLN   FQELLCQ EEEFG+ HPMGA      E   +
Sbjct: 111 VPKGYLAVYVGKNKMTRFVIPVSYLNHSSFQELLCQAEEEFGFDHPMGALTIPCTEDAFI 170

Query: 76  SLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPLSFTGPNWL 135
           +L+  L     E            H + L S +K +    +++K     + L       +
Sbjct: 171 NLVSSLNIGVFEET----------HQVSLRSLLKSRNGARLESK-----IGLE------V 230

Query: 136 ISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVVNAKQILQW 195
           +S  P + +  K S         P                  IMG R PGVV+AKQ++Q 
Sbjct: 231 LSDFPHQSLERKLSDQKLSALLRP-----------------TIMGFRFPGVVHAKQLIQR 290

Query: 196 IHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIP 255
              S+  +PKG+LAVYVG+ +  RFV+PVSYL+H SFQ LL QAEEEFGF HPMG LTIP
Sbjct: 291 PFSSAKDVPKGYLAVYVGKNKMTRFVIPVSYLNHSSFQELLCQAEEEFGFDHPMGALTIP 326

Query: 256 CREEAFLNLTQSLN 268
           C E+ F+NL  SLN
Sbjct: 351 CSEDTFINLVSSLN 326

BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6DPJ6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026823 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42
Identity = 115/264 (43.56%), Postives = 149/264 (56.44%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYE---- 75
           VPKGY  VYVG+++  RF+IP++YLN   FQELLCQ EEEFG+ HPMGA      E    
Sbjct: 157 VPKGYLAVYVGKNKMTRFIIPVSYLNNSSFQELLCQAEEEFGFDHPMGALTIPCSEDTFI 216

Query: 76  ------RVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPL 135
                  +  + +L+  S      D+    +F     +S   +  N +V  K CG+L+  
Sbjct: 217 NLVSSLNIKAMSVLQITSSVQLRCDI-NEDVFTARNCESTHWMSTNDYVN-KECGNLMN- 276

Query: 136 SFTGPNWLISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVV 195
            F     + SS    Q+L   S            H L      + +T   IMG R PGVV
Sbjct: 277 EFCDNVHIGSS--ASQLLTTSSTL--------SLHFLPSSTLRETST---IMGFRFPGVV 336

Query: 196 NAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHH 255
           +AKQ++Q    S+  IPKG+LAVYVG+++  RFV+PVSYL+  SFQ LL QAEEEFGF H
Sbjct: 337 HAKQLIQRPFSSAKDIPKGYLAVYVGKSKMTRFVIPVSYLNSSSFQELLCQAEEEFGFDH 396

Query: 256 PMGGLTIPCREEAFLNLTQSLNGS 270
           PMG LTIPC EE F+NL   +NGS
Sbjct: 397 PMGALTIPCSEETFINL---MNGS 401

BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6GDF5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011907 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42
Identity = 112/257 (43.58%), Postives = 145/257 (56.42%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYE---- 75
           VPKGY  VYVG+++  RF+IP++YLN   FQELLCQ EEEFG+ HPMGA      E    
Sbjct: 210 VPKGYLAVYVGKNKMTRFIIPVSYLNNSSFQELLCQAEEEFGFDHPMGALTIPCSEDTFI 269

Query: 76  ------RVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPL 135
                  +  + +L+  S      D+    +F     +S   +  N +V  K CG+L+  
Sbjct: 270 NLVSSLNIKAMSVLQITSSVQLRCDI-NEDVFTARNCESTHWMSTNDYVN-KECGNLMN- 329

Query: 136 SFTGPNWLISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVV 195
            F     + SS    Q+L   S            H L      + +T   IMG R PGVV
Sbjct: 330 EFCDNVHIGSS--ASQLLTTSSTL--------SLHFLPSSTLRETST---IMGFRFPGVV 389

Query: 196 NAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHH 255
           +AKQ++Q    S+  IPKG+LAVYVG+++  RFV+PVSYL+  SFQ LL QAEEEFGF H
Sbjct: 390 HAKQLIQRPFSSAKDIPKGYLAVYVGKSKMTRFVIPVSYLNSSSFQELLCQAEEEFGFDH 449

Query: 256 PMGGLTIPCREEAFLNL 263
           PMG LTIPC EE F+NL
Sbjct: 450 PMGALTIPCSEETFINL 450

BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6G9I4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023632 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 122/308 (39.61%), Postives = 164/308 (53.25%), Query Frame = 0

Query: 16  VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYERV-- 75
           VPKGY  VYVG+S+  RF+IP++YLN   FQ+LLCQ EEEFG+ HPMGA      E    
Sbjct: 201 VPKGYLAVYVGKSKMTRFIIPVSYLNNSSFQDLLCQAEEEFGFDHPMGALTIPCTEDAFI 260

Query: 76  -----SLIKLLRDASREYNHGDLPTNAI--------FHMMGLDSRVKL------------ 135
                S  +LL  +S    H  LP++ +        F   G+    +L            
Sbjct: 261 NLIGSSASQLLTTSSTLSLH-FLPSSTLRETSTIMGFRFPGVVHAKQLIQRPFSSAKDIP 320

Query: 136 QGNLHV---KAKPCGSLLPLS-------------------FTGPNWLISSPPLKQI---L 195
           +G L V   K+K    ++P+S                   F  P   ++ P  ++    L
Sbjct: 321 KGYLAVYVGKSKMTRFVIPVSYLNSSSFQELLCQAEEEFGFDHPMGALTIPCSEETFINL 380

Query: 196 MKFSPYF---HIVFYLPFKH-NLKQDLQHQYNTQFAIMGIRLPGVVNAKQILQWIHRSSD 255
           M  S  +    + F    KH +LK  ++       AIMG R+PGVV+AKQ++Q    S+ 
Sbjct: 381 MNGSLAYLGNWVGFVFAKKHMHLKIHMETS-----AIMGFRIPGVVHAKQLIQKPFSSAK 440

Query: 256 AIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIPCREEAF 268
            +PKG+LAVYVG+ +  RFV+P+SYL+H SFQ LL QAEEEFGF HPMG LTIPC E+ F
Sbjct: 441 DVPKGYLAVYVGKNKMTRFVIPISYLNHSSFQELLCQAEEEFGFDHPMGALTIPCSEDVF 500

BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6F8D3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029249 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.5e-41
Identity = 115/289 (39.79%), Postives = 152/289 (52.60%), Query Frame = 0

Query: 16   VPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGA-----KVQNLY 75
            VPKGY  VYVGE +  RFVIPI++LNQP FQ+LL Q E+EFG+ HPMGA           
Sbjct: 725  VPKGYLAVYVGEMRMKRFVIPISFLNQPSFQDLLSQAEQEFGFDHPMGALTIPCNEDAFL 784

Query: 76   ERVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPLSFTGP 135
            E  S   LLR+A +E+   D P  A+      +S ++L   L +       LL  SF   
Sbjct: 785  ELPSFQDLLREAEKEFGF-DHPMGALKIPCNEESFIELVSLLKL-LMITKKLLRRSF--- 844

Query: 136  NWLISSPPLKQILMKFS-PYFHIVFYL-----------------PFKHNLKQDLQHQYN- 195
                S+   K+  M    P  H+  Y+                 P    L    + +Y  
Sbjct: 845  ----SNNSNKEASMAVDVPKGHLAVYVGENEKKRFVVPVSFLSQPLFQELLTQAEEEYGY 904

Query: 196  -----------TQ--FAIMGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRF 255
                       TQ  F  MG R   +V+AKQ++Q    S+  +PKG+LAVYVGE + +RF
Sbjct: 905  DHPMGGLTIPCTQHNFTTMGFRFASLVHAKQLIQKPFSSTKDVPKGYLAVYVGEKRMKRF 964

Query: 256  VVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLN 268
            V+P+S L+ PSFQ LL+QAE+EFGF HPMG LTIPC E+AF+ L   L+
Sbjct: 965  VIPISLLNQPSFQDLLNQAEQEFGFDHPMGALTIPCNEDAFIELVSRLS 1004

BLAST of ClCG02G004400 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-26
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0

Query: 177 MGIRLPGVV-NAKQILQWIHRSSD--AIPKGHLAVYVGE-AQRRRFVVPVSYLSHPSFQT 236
           M IR+  V+ ++KQ+L+ +  SS+  AIPKGHLAVYVGE  Q+RRFVVPV+YLSHP FQ 
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQK 60

Query: 237 LLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS 270
           LL +AEEEFGF HPMGGLTIPC E+ F++L   L+ S
Sbjct: 61  LLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

BLAST of ClCG02G004400 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-26
Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0

Query: 177 MGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGE--AQRRRFVVPVSYLSHPSFQTLL 236
           M IRL  V+N+KQ      +    +PKGH+AVYVGE    ++RFVVP+SYL+HPSFQ LL
Sbjct: 1   MAIRLSRVINSKQ----SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLL 60

Query: 237 SQAEEEFGFHHPMGGLTIPCREEAFLNLTQS 266
           S+AEEEFGF+HP+GGLTIPCREE F+ L  S
Sbjct: 61  SRAEEEFGFNHPIGGLTIPCREETFVGLLNS 87

BLAST of ClCG02G004400 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 4.2e-25
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0

Query: 184 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 243
           ++ AK+IL     +  A PKG LAVYVGE+Q++R++VP+SYLS PSFQ LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 66

Query: 244 HHPMGGLTIPCREEAFLNLTQSL 267
            HPMGGLTIPC E+ F+N+T  L
Sbjct: 67  AHPMGGLTIPCPEDTFINVTSRL 89

BLAST of ClCG02G004400 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 4.2e-25
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0

Query: 184 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 243
           ++ AK+IL     +  A PKG LAVYVGE+Q++R++VPVSYL+ PSFQ LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 244 HHPMGGLTIPCREEAFLNLTQSL 267
            HPMGGLTIPC E+ F+N+T  L
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRL 89

BLAST of ClCG02G004400 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 9.3e-25
Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0

Query: 184 VVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGF 243
           ++ AK+IL     ++ A PKG LAVYVGE+Q++R++VP+SYL+ PSFQ LLS++EEEFGF
Sbjct: 7   LLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 66

Query: 244 HHPMGGLTIPCREEAFLNLT 264
            HPMGGLTIPC E+ F+N+T
Sbjct: 67  DHPMGGLTIPCPEDTFINVT 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF8406545.11.3e-4440.75hypothetical protein HHK36_008633 [Tetracentron sinense][more]
KAF4381387.11.2e-4242.91hypothetical protein G4B88_029742 [Cannabis sativa][more]
KAF4348003.12.1e-4243.56hypothetical protein G4B88_026823 [Cannabis sativa][more]
KAF7143766.12.1e-4241.88hypothetical protein RHSIM_Rhsim05G0066100 [Rhododendron simsii][more]
KAF7810819.14.6e-4241.92Auxin responsive SAUR protein [Senna tora][more]
Match NameE-valueIdentityDescription
Q9FJG15.9e-2461.45Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S... [more]
Q9FK625.9e-2461.45Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S... [more]
P330801.0e-2357.14Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1[more]
Q9FJG01.3e-2361.25Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S... [more]
P330831.7e-2359.34Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A7J6GEY85.9e-4342.91Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029742 PE=3 SV=1[more]
A0A7J6DPJ61.0e-4243.56Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026823 PE=3 SV=1[more]
A0A7J6GDF52.9e-4243.58Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011907 PE=3 SV=1[more]
A0A7J6G9I44.2e-4139.61Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023632 PE=3 SV=1[more]
A0A7J6F8D35.5e-4139.79Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029249 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G21210.11.3e-2662.89SAUR-like auxin-responsive protein family [more]
AT4G34800.12.2e-2661.54SAUR-like auxin-responsive protein family [more]
AT5G18010.14.2e-2561.45SAUR-like auxin-responsive protein family [more]
AT5G18080.14.2e-2561.45SAUR-like auxin-responsive protein family [more]
AT5G18020.19.3e-2561.25SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 13..62
e-value: 2.9E-16
score: 59.4
coord: 193..265
e-value: 1.7E-24
score: 85.8
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 155..267
NoneNo IPR availablePANTHERPTHR31929SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATEDcoord: 8..63
NoneNo IPR availablePANTHERPTHR31929:SF80SUBFAMILY NOT NAMEDcoord: 155..267
NoneNo IPR availablePANTHERPTHR31929:SF80SUBFAMILY NOT NAMEDcoord: 8..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G004400.1ClCG02G004400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin