ClCG02G004400 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCTTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGTGTAGTCTATGTTGGAGAAAGCCAAAAGAATCGGTTCGTGATCCCGATAACTTACTTGAATCAACCACGTTTTCAGGAGTTGCTTTGCCAAACTGAAGAAGAATTTGGTTATCATCATCCTATGGGTGGTCTTACTATTCATTGCAGAGATGACATTTTTATTGATCTCATTTCTCATATGAATGATCTATGAGAGATGCACTGAAATCTGTAGCATGTAATCAATCTTGTGGAATAGGAACATTAGAAATAACCAAAACCATGTACATTTTTTTCATTTTCCTTCTTTTTTGTTTGCTTGTGATGGGATTAAAAGAATGTTTCCCTACATTAAGGAAATTACCAGTGATGGAAATGAAATTGTCACAACTTTACTAGAAATTGAAGAGGTTTCTTACTTCAAAAAGTATTTTCTTTGTTTCTTGGTTAAGCTCTCTTCTCTGTTTATATAAATTACATGGATTCATCTTAATTTTCAAGAGCTTGAGCATTCACAGAAAAGATGCAAAACCATTTATATTGACTCTTTTTTGGGCTTGATTGCATCAAACAAGCATCTGTAAGGTTATAATAACAAAAAACTTGATCAAGAGATTTTATTGGTATATAATATCTATTAATCATAATCAATGGTAGGCCATGATTGGCCTTCTATGAGGATGCTGTATAGTCATATAACCAAATGCTTTTCTCAGTTCTAAGATCAGGTAGGAAGACAATAATGTTTGTGTTAGTTTTCATCCTTCTGCCTTGTAACTCTTTTTCTTGCCTTCCAGCTATAAATGGTAAACATATTATTGAATCTCAGGTAAAACAAAGTGCTCCCAGTAACTCACAAACAAAAGGGAACTGATTATATCGTACAAATATGGGGCTTCTCCATCTTCTTAAAAGAAACCAAGGAGTTTCAACGGTTCATAAGGGTTTGTGCGGTCTATGTCGGAGAGAGCCAAAAGAAACGGTTCATGATTTCAATAACTTACTTGAATCAACCATCTTTTCTAGAGTTGCTTTGTCGGTTTGAAGAAGAATTTGGTTACCAGCATGCTATGGGTGGTCTTACTATTACTATTCATTGCAGAGACCACATTTTCACCAATATCATATCCCATTTTGAATGATTTATGAGAGATGCACTGACATCTACAATATACAACCAATATACTTCTCTTCTTTTCTTCAACAGACCAACTACATGGATGAATTTTTAGTTTTTAGTCGATGCAGAAAAGATGCTACGTCATTCATATCGATTCGTTTTGGTTGAATCAATCATTTTTAAACTGTACTTGAACTAATAACTTCACAACTAGTATTTGATTTCAGAAATATCTGAAACAGTTATCCTCTATTCCTTTATTTTCTTATATAGCTTCACCAATTGATCAATTCAAGCAGAAGCTAAGATGTATCCAAAAATTTTTAGAGTTCTTTTTCATTTCCTATTATGAATGGATCATGAAGAAGGAGAGCCAAAGTTCAAAATCTGTATGAGAGAGTTTCTTTGATAAAACTGCTCAGAGATGCTTCTAGAGAGTACAACCATGGCGACCTGTTAGTTTCCTTAAGAGCTAGATTTTCTTAAGATTCAAAATGGACAGAAAAGTAGTGTACGACAATATTGTCTTTCCTCAGGTTTCTTGGAGAAGATCATCATACATTTATTATTATTTATAGTTTGAAGTGCTTGAAACTTGGACTCCTAACTCTACCAATTCACATATGCTAGGGGCAGTCCTAATTTTCCTTCTCTAAAGCCTTCACTGGTCTAGCACCTCCATGTTATATAGTCTAGGAATGATCTATATTAATGTTGTTAGGGACAACAAACCTCCAAATATCTCCACGATATGGTATGATATTGTCCACTTTGGACATAACCCTCGTGGTTTTATTTTTTGTTTCACCCAAAAGGTCTCATACCATTGGAGATAGTTGTCGTCTCTTATAAACCCATGATCATCCCTTTATTTAACCGATGTGGGACTTTGATCGCATTCCAGTCCAACAAATGCTATCTTCCATATGATGGGATTAGACAGTAGGGTAAAGCTGCAAGGCAATCTACATGTGAAAGTGAGCCCACTGACTTGTTATCTGCTTGTTTAGGTCTGACTGATGAAGATCAACACCTAAACTTCCAACATTCATATATATTTCATTAAACTTCAGCTAGCAGGCAAAGCCATGTGGTTCACTCTTACCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTGTTGCTTAAGAGTTAAGAGGCACTAAAATATTTCGTCTGTGTATATATAGAAGCAGATCCTAATGAAGTTCTCACCATATTTCCATATTGTGTTCTATCTTCCATTCAAACATAACTTGAAACAAGACTTGCAGCATCAGTATAACACACAGTTTGCCATCATGGGAATTCGTCTACCTGGTGTTGTTAATGCCAAACAAATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACCCAAAGTTTGAACGGCTCATGA ATGGGGCTTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGTGTAGTCTATGTTGGAGAAAGCCAAAAGAATCGGTTCGTGATCCCGATAACTTACTTGAATCAACCACGTTTTCAGGAGTTGCTTTGCCAAACTGAAGAAGAATTTGGTTATCATCATCCTATGGGTGCCAAAGTTCAAAATCTGTATGAGAGAGTTTCTTTGATAAAACTGCTCAGAGATGCTTCTAGAGAGTACAACCATGGCGACCTTCCAACAAATGCTATCTTCCATATGATGGGATTAGACAGTAGGGTAAAGCTGCAAGGCAATCTACATGTGAAAGCAAAGCCATGTGGTTCACTCTTACCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTAAGCAGATCCTAATGAAGTTCTCACCATATTTCCATATTGTGTTCTATCTTCCATTCAAACATAACTTGAAACAAGACTTGCAGCATCAGTATAACACACAGTTTGCCATCATGGGAATTCGTCTACCTGGTGTTGTTAATGCCAAACAAATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACCCAAAGTTTGAACGGCTCATGA ATGGGGCTTCGCCATCTTCTTAAAAGAAACCAAGGAGTTTCTGCAGTTCCCAAGGGCTATTGTGTAGTCTATGTTGGAGAAAGCCAAAAGAATCGGTTCGTGATCCCGATAACTTACTTGAATCAACCACGTTTTCAGGAGTTGCTTTGCCAAACTGAAGAAGAATTTGGTTATCATCATCCTATGGGTGCCAAAGTTCAAAATCTGTATGAGAGAGTTTCTTTGATAAAACTGCTCAGAGATGCTTCTAGAGAGTACAACCATGGCGACCTTCCAACAAATGCTATCTTCCATATGATGGGATTAGACAGTAGGGTAAAGCTGCAAGGCAATCTACATGTGAAAGCAAAGCCATGTGGTTCACTCTTACCTCTGTCCTTCACTGGGCCCAATTGGCTGATTTCCTCTCCACCACTTAAGCAGATCCTAATGAAGTTCTCACCATATTTCCATATTGTGTTCTATCTTCCATTCAAACATAACTTGAAACAAGACTTGCAGCATCAGTATAACACACAGTTTGCCATCATGGGAATTCGTCTACCTGGTGTTGTTAATGCCAAACAAATTCTCCAATGGATTCATCGCAGTTCAGATGCGATTCCGAAAGGCCACTTGGCTGTTTATGTTGGAGAAGCACAGAGGAGGCGCTTTGTTGTACCAGTTTCTTACTTGAGTCATCCTTCTTTTCAGACATTGTTGAGTCAAGCTGAAGAGGAGTTTGGTTTCCATCATCCCATGGGAGGTCTCACAATTCCATGTAGAGAAGAAGCTTTCCTTAATCTCACCCAAAGTTTGAACGGCTCATGA MGLRHLLKRNQGVSAVPKGYCVVYVGESQKNRFVIPITYLNQPRFQELLCQTEEEFGYHHPMGAKVQNLYERVSLIKLLRDASREYNHGDLPTNAIFHMMGLDSRVKLQGNLHVKAKPCGSLLPLSFTGPNWLISSPPLKQILMKFSPYFHIVFYLPFKHNLKQDLQHQYNTQFAIMGIRLPGVVNAKQILQWIHRSSDAIPKGHLAVYVGEAQRRRFVVPVSYLSHPSFQTLLSQAEEEFGFHHPMGGLTIPCREEAFLNLTQSLNGS Homology
BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF8406545.1 (hypothetical protein HHK36_008633 [Tetracentron sinense]) HSP 1 Score: 191.0 bits (484), Expect = 1.3e-44 Identity = 119/292 (40.75%), Postives = 157/292 (53.77%), Query Frame = 0
BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF4381387.1 (hypothetical protein G4B88_029742 [Cannabis sativa]) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-42 Identity = 109/254 (42.91%), Postives = 141/254 (55.51%), Query Frame = 0
BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF4348003.1 (hypothetical protein G4B88_026823 [Cannabis sativa]) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-42 Identity = 115/264 (43.56%), Postives = 149/264 (56.44%), Query Frame = 0
BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF7143766.1 (hypothetical protein RHSIM_Rhsim05G0066100 [Rhododendron simsii]) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-42 Identity = 116/277 (41.88%), Postives = 147/277 (53.07%), Query Frame = 0
BLAST of ClCG02G004400 vs. NCBI nr
Match: KAF7810819.1 (Auxin responsive SAUR protein [Senna tora]) HSP 1 Score: 182.6 bits (462), Expect = 4.6e-42 Identity = 109/260 (41.92%), Postives = 147/260 (56.54%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.0e-23 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23 Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23 Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6GEY8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029742 PE=3 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 5.9e-43 Identity = 109/254 (42.91%), Postives = 141/254 (55.51%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6DPJ6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026823 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.0e-42 Identity = 115/264 (43.56%), Postives = 149/264 (56.44%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6GDF5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_011907 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42 Identity = 112/257 (43.58%), Postives = 145/257 (56.42%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6G9I4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023632 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41 Identity = 122/308 (39.61%), Postives = 164/308 (53.25%), Query Frame = 0
BLAST of ClCG02G004400 vs. ExPASy TrEMBL
Match: A0A7J6F8D3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029249 PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 5.5e-41 Identity = 115/289 (39.79%), Postives = 152/289 (52.60%), Query Frame = 0
BLAST of ClCG02G004400 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-26 Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of ClCG02G004400 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.1 bits (292), Expect = 2.2e-26 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 0
BLAST of ClCG02G004400 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.8 bits (281), Expect = 4.2e-25 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of ClCG02G004400 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.8 bits (281), Expect = 4.2e-25 Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of ClCG02G004400 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 9.3e-25 Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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