ClCG02G004220 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G004220
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	glycine-rich protein 2-like
Location	CG_Chr02: 4305437 .. 4306459 (-)
RNA-Seq Expression	ClCG02G004220
Synteny	ClCG02G004220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGTGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAGTACGTTTCTTTTTTTTTTTTTTTAATAAATTTTTCTTCCTTATTATATATAAAAACCCTTTTTCTCCCAAATCTAGAGAGAGAAATTGGGTGATTAGGGTTTTGCAGTTGTTGGGTTTCTTTGTGAGAGAGAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

mRNA sequence

ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGTGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

Coding sequence (CDS)

ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGTGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

Protein sequence

MSEIPKVPLAVRLPSQIARRVAPFQGREAEEPWPSDLVGNHPPSLRIGRSASNNVTPQNHKWKKRRLRMTGRSSRFQAFRFTKRRDREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFARECPSSGR

Homology

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BLAST of ClCG02G004220 vs. NCBI nr
Match: XP_038888820.1 (glycine-rich protein 2-like [Benincasa hispida])

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-81
Identity = 203/208 (97.60%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGEASVQGSR GGG GGGGGYSS GGGGYGGGGGGGRGRRGGGGYGFNGG
Sbjct: 61  GRSKAVDVTGPGEASVQGSR-GGGSGGGGGYSS-GGGGYGGGGGGGRGRRGGGGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 268
           SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-- 180

Query: 269 GGGGGGGGNCYSCGESGHFARECPSSGR 297
           GGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGNCYSCGESGHFARECPSSGR 204

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BLAST of ClCG02G004220 vs. NCBI nr
Match: XP_011658593.1 (glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_020571 [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 5.5e-81
Identity = 205/214 (95.79%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGG----GGGGGYSSGGGGGYGGGGGGGRGRRGGGGYG 208
           GRSKAVDVTGPGEASVQGSRGGGGG    GGGGGYSS  GGGYGGGGGGGRGRRGGGGYG
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSS--GGGYGGGGGGGRGRRGGGGYG 120

Query: 209 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ-GGG 268
           FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ GGG
Sbjct: 121 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGG 180

Query: 269 DRY-GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
           DRY GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 DRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212

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BLAST of ClCG02G004220 vs. NCBI nr
Match: XP_008448117.2 (PREDICTED: LOW QUALITY PROTEIN: glycine-rich protein 2-like, partial [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-72
Identity = 190/200 (95.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 100 FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 159
           FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Sbjct: 1   FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 60

Query: 160 GEASVQGSR---GGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGG 219
           GEASVQGSR   GGGGGGGGGGYSS  GGGYGGGGGGGRG RGGGGYGFNGGSGGGGRGG
Sbjct: 61  GEASVQGSRGGGGGGGGGGGGGYSS--GGGYGGGGGGGRGXRGGGGYGFNGGSGGGGRGG 120

Query: 220 YGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGG 279
           YGGGGGGYGGGGY GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY   GGGGGGG
Sbjct: 121 YGGGGGGYGGGGY-GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY---GGGGGGG 180

Query: 280 NCYSCGESGHFARECPSSGR 297
           NCYSCGESGHFARECPSSGR
Sbjct: 181 NCYSCGESGHFARECPSSGR 194

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BLAST of ClCG02G004220 vs. NCBI nr
Match: XP_022989065.1 (glycine-rich protein 2-like [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-71
Identity = 189/211 (89.57%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-- 268
           SGGGGRG YGG GGG  GGGYG GGGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGLYGGSGGGGYGGGYGSGGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRYSG 180

Query: 269 -GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
            GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGGGGNCYSCGESGHFARECPSSGR 207

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BLAST of ClCG02G004220 vs. NCBI nr
Match: XP_022928350.1 (glycine-rich protein 2-like [Cucurbita moschata] >KAG6589006.1 Cold shock domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015270.1 Cold shock domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-69
Identity = 186/208 (89.42%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 268
           SGGGGRG YGG GGG  GGGY G GGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGSYGGSGGGGYGGGY-GSGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRY-S 180

Query: 269 GGGGGGGGNCYSCGESGHFARECPSSGR 297
           GGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGNCYSCGESGHFARECPSSGR 202

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BLAST of ClCG02G004220 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 8.1e-51
Identity = 150/211 (71.09%), Postives = 162/211 (76.78%), Query Frame = 0


Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           E  +R  G VKWFSDQKG+GFI+P+DGGEDLFVHQS IRS+GFRSL  GE VEF +E+  
Sbjct: 4   ESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGG 63

Query: 148 DGRSKAVDVTGPGEASVQGSRGGGGGGG--GGGYSSGGGGGYGGGGGGGRGRRGGGGYGF 207
           DGR+KAVDVTGP  A+VQG RGGGGGGG  GGG   GG GGYGGGG GG    GGG  G+
Sbjct: 64  DGRTKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYGGGGRGGSRGYGGGDGGY 123

Query: 208 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDR 267
            GG G GG   YGGGGGGYGGGG  GGGG GGG  CFKCGE+GH ARDC QSG  GGG R
Sbjct: 124 GGGGGYGGGSRYGGGGGGYGGGGGYGGGGSGGGSGCFKCGESGHFARDCSQSGGGGGGGR 183

Query: 268 YGGGGGGGGGGNCYSCGESGHFARECPSSGR 297
           +GGGGGGGGGG CY CGE GHFAREC S GR
Sbjct: 184 FGGGGGGGGGGGCYKCGEDGHFARECTSGGR 214

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BLAST of ClCG02G004220 vs. ExPASy Swiss-Prot
Match: Q38896 (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.2e-39
Identity = 127/212 (59.91%), Postives = 145/212 (68.40%), Query Frame = 0


Query: 91  ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 150
           +R  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E ++ GR
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 151 SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 210
            KA++V+GP  A VQG+ GGGG       SSGG GG+GGGGG G G RGGG Y       
Sbjct: 73  PKAIEVSGPDGAPVQGNSGGGG-------SSGGRGGFGGGGGRG-GGRGGGSY------- 132

Query: 211 GGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG----SQGGGDRY 270
                     GGGYGG G GG GGGGG  +CFKCGE GHMAR+C Q G      GGG RY
Sbjct: 133 ----------GGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY 192

Query: 271 GGGGGGGGGG---NCYSCGESGHFARECPSSG 296
           G GGGGGGGG   +CYSCGESGHFAR+C S G
Sbjct: 193 GSGGGGGGGGGGLSCYSCGESGHFARDCTSGG 199

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BLAST of ClCG02G004220 vs. ExPASy Swiss-Prot
Match: Q41188 (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-38
Identity = 130/228 (57.02%), Postives = 147/228 (64.47%), Query Frame = 0


Query: 86  DREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEA 145
           D    ER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E 
Sbjct: 4   DNGGGERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEI 63

Query: 146 ESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGF 205
           +++ R KA+DV+GP  A VQG+ GGG        SSGG GG+GGG GGGR          
Sbjct: 64  DNNNRPKAIDVSGPDGAPVQGNSGGG--------SSGGRGGFGGGRGGGR---------- 123

Query: 206 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ--------S 265
             GSG    GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +         
Sbjct: 124 --GSG----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGG 183

Query: 266 GSQGGGDRYGGG---------GGGGGGGNCYSCGESGHFARECPSSGR 297
           G  GGG  YGGG         GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 184 GGYGGGGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

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BLAST of ClCG02G004220 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 7.6e-17
Identity = 127/270 (47.04%), Postives = 144/270 (53.33%), Query Frame = 0


Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R  GKV WFSD KGYGFI+P+DGGE+LFVHQSSI SDGFRSL +GE VE+ I   S
Sbjct: 6   QSAARSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGS 65

Query: 148 DGRSKAVDVTGPGEASV----QGSRGGGGG---------------GGGGGYSSGGGGGYG 207
           DG++KA++VT PG  S+      SRG GG                GG GG S GGGGG  
Sbjct: 66  DGKTKAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRR 125

Query: 208 GGGGG-----------GRGRRGGGGYGFNGGSGGGGRGGYGGG---------GGGYGGGG 267
            GG G            R  R  GG G +GG GGGGR  Y  G          GG GG  
Sbjct: 126 SGGEGECYMCGDVGHFARDCRQSGG-GNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNR 185

Query: 268 YGGGGG-GGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGG------------------ 296
           YGGGGG G GG  C+ CG  GH ARDC Q+   GGG+  GGG                  
Sbjct: 186 YGGGGGRGSGGDGCYMCGGVGHFARDCRQN---GGGNVGGGGSTCYTCGGVGHIAKVCTS 245

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BLAST of ClCG02G004220 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.7e-13
Identity = 108/217 (49.77%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R +GKV WF+  KGYGFI+P+DG  +LFVHQSSI S+G+RSL VG+ VEF I   S
Sbjct: 6   QSAARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGS 65

Query: 148 DGRSKAVDVTGPGEASVQ---GSRGGG---GGGGGGGYSSGGGG------GYGGGGGGGR 207
           DG++KAV+VT PG  S++    SRG G   GGGG G Y+ G  G      G GGGGGGG 
Sbjct: 66  DGKTKAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGE 125

Query: 208 GR-RGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDC 267
            R RGG G    G +G   R     G G   G   GG  G      C+ CG+ GH+ARDC
Sbjct: 126 RRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG------CYTCGDVGHVARDC 185

Query: 268 YQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFAREC 292
            Q  S G GD+ G   GG  G  CY+CG+ GHFAR+C
Sbjct: 186 TQK-SVGNGDQRGAVKGGNDG--CYTCGDVGHFARDC 213

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BLAST of ClCG02G004220 vs. ExPASy TrEMBL
Match: A0A0A0K4M5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.7e-81
Identity = 205/214 (95.79%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGG----GGGGGYSSGGGGGYGGGGGGGRGRRGGGGYG 208
           GRSKAVDVTGPGEASVQGSRGGGGG    GGGGGYSS  GGGYGGGGGGGRGRRGGGGYG
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSS--GGGYGGGGGGGRGRRGGGGYG 120

Query: 209 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ-GGG 268
           FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ GGG
Sbjct: 121 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGG 180

Query: 269 DRY-GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
           DRY GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 DRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212

[Close]

BLAST of ClCG02G004220 vs. ExPASy TrEMBL
Match: A0A1S3BIY4 (LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490405 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73
Identity = 190/200 (95.00%), Postives = 190/200 (95.00%), Query Frame = 0


Query: 100 FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 159
           FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Sbjct: 1   FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 60

Query: 160 GEASVQGSR---GGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGG 219
           GEASVQGSR   GGGGGGGGGGYSS  GGGYGGGGGGGRG RGGGGYGFNGGSGGGGRGG
Sbjct: 61  GEASVQGSRGGGGGGGGGGGGGYSS--GGGYGGGGGGGRGXRGGGGYGFNGGSGGGGRGG 120

Query: 220 YGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGG 279
           YGGGGGGYGGGGY GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY   GGGGGGG
Sbjct: 121 YGGGGGGYGGGGY-GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY---GGGGGGG 180

Query: 280 NCYSCGESGHFARECPSSGR 297
           NCYSCGESGHFARECPSSGR
Sbjct: 181 NCYSCGESGHFARECPSSGR 194

[Close]

BLAST of ClCG02G004220 vs. ExPASy TrEMBL
Match: A0A6J1JLC0 (glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486249 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 8.6e-72
Identity = 189/211 (89.57%), Postives = 193/211 (91.47%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-- 268
           SGGGGRG YGG GGG  GGGYG GGGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGLYGGSGGGGYGGGYGSGGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRYSG 180

Query: 269 -GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
            GGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGGGGNCYSCGESGHFARECPSSGR 207

[Close]

BLAST of ClCG02G004220 vs. ExPASy TrEMBL
Match: A0A6J1ERG9 (glycine-rich protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435206 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 6.2e-70
Identity = 186/208 (89.42%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 208
           GRSKAVDVTGPGE+SVQGSR GGGGGGGG Y  GGGGGY GGGGGGRGRR  GGYGFNGG
Sbjct: 61  GRSKAVDVTGPGESSVQGSR-GGGGGGGGSYGGGGGGGY-GGGGGGRGRR--GGYGFNGG 120

Query: 209 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 268
           SGGGGRG YGG GGG  GGGY G GGGGGGGACFKCGE GHMARDCYQSGSQGGGDRY  
Sbjct: 121 SGGGGRGSYGGSGGGGYGGGY-GSGGGGGGGACFKCGEAGHMARDCYQSGSQGGGDRY-S 180

Query: 269 GGGGGGGGNCYSCGESGHFARECPSSGR 297
           GGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 GGGGGGGGNCYSCGESGHFARECPSSGR 202

[Close]

BLAST of ClCG02G004220 vs. ExPASy TrEMBL
Match: A0A6J1HY03 (glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468487 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.5e-63
Identity = 171/211 (81.04%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 89  MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 148
           M+ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRSDGFRSLGVGEDVEFLIE E+D
Sbjct: 1   MSERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEPEAD 60

Query: 149 GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFN-G 208
           GR KAVDVTGPGE+SVQGSR                   GGGGGG RG R GGGYGFN G
Sbjct: 61  GRCKAVDVTGPGESSVQGSR-------------------GGGGGGERGSR-GGGYGFNGG 120

Query: 209 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY- 268
           G GGGGRGGYG GGGGY GGGYGGGGGGGG   CFKCGETGHMARDCYQ GSQGGGDRY 
Sbjct: 121 GGGGGGRGGYGRGGGGY-GGGYGGGGGGGG---CFKCGETGHMARDCYQGGSQGGGDRYG 180

Query: 269 -GGGGGGGGGGNCYSCGESGHFARECPSSGR 297
            GGGGGGGGGGNCYSCGESGHFAR+C SSGR
Sbjct: 181 GGGGGGGGGGGNCYSCGESGHFARDCQSSGR 187

[Close]

BLAST of ClCG02G004220 vs. TAIR 10
Match: AT2G21060.1 (glycine-rich protein 2B )

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-40
Identity = 127/212 (59.91%), Postives = 145/212 (68.40%), Query Frame = 0


Query: 91  ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 150
           +R  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E ++ GR
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 151 SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 210
            KA++V+GP  A VQG+ GGGG       SSGG GG+GGGGG G G RGGG Y       
Sbjct: 73  PKAIEVSGPDGAPVQGNSGGGG-------SSGGRGGFGGGGGRG-GGRGGGSY------- 132

Query: 211 GGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG----SQGGGDRY 270
                     GGGYGG G GG GGGGG  +CFKCGE GHMAR+C Q G      GGG RY
Sbjct: 133 ----------GGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRY 192

Query: 271 GGGGGGGGGG---NCYSCGESGHFARECPSSG 296
           G GGGGGGGG   +CYSCGESGHFAR+C S G
Sbjct: 193 GSGGGGGGGGGGLSCYSCGESGHFARDCTSGG 199

[Close]

BLAST of ClCG02G004220 vs. TAIR 10
Match: AT4G38680.1 (glycine rich protein 2 )

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-39
Identity = 130/228 (57.02%), Postives = 147/228 (64.47%), Query Frame = 0


Query: 86  DREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEA 145
           D    ER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E 
Sbjct: 4   DNGGGERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEI 63

Query: 146 ESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGF 205
           +++ R KA+DV+GP  A VQG+ GGG        SSGG GG+GGG GGGR          
Sbjct: 64  DNNNRPKAIDVSGPDGAPVQGNSGGG--------SSGGRGGFGGGRGGGR---------- 123

Query: 206 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ--------S 265
             GSG    GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +         
Sbjct: 124 --GSG----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGG 183

Query: 266 GSQGGGDRYGGG---------GGGGGGGNCYSCGESGHFARECPSSGR 297
           G  GGG  YGGG         GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 184 GGYGGGGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]

BLAST of ClCG02G004220 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-18
Identity = 127/270 (47.04%), Postives = 144/270 (53.33%), Query Frame = 0


Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R  GKV WFSD KGYGFI+P+DGGE+LFVHQSSI SDGFRSL +GE VE+ I   S
Sbjct: 6   QSAARSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGS 65

Query: 148 DGRSKAVDVTGPGEASV----QGSRGGGGG---------------GGGGGYSSGGGGGYG 207
           DG++KA++VT PG  S+      SRG GG                GG GG S GGGGG  
Sbjct: 66  DGKTKAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRR 125

Query: 208 GGGGG-----------GRGRRGGGGYGFNGGSGGGGRGGYGGG---------GGGYGGGG 267
            GG G            R  R  GG G +GG GGGGR  Y  G          GG GG  
Sbjct: 126 SGGEGECYMCGDVGHFARDCRQSGG-GNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGNR 185

Query: 268 YGGGGG-GGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGG------------------ 296
           YGGGGG G GG  C+ CG  GH ARDC Q+   GGG+  GGG                  
Sbjct: 186 YGGGGGRGSGGDGCYMCGGVGHFARDCRQN---GGGNVGGGGSTCYTCGGVGHIAKVCTS 245

[Close]

BLAST of ClCG02G004220 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-14
Identity = 108/217 (49.77%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 88  EMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAES 147
           + A R +GKV WF+  KGYGFI+P+DG  +LFVHQSSI S+G+RSL VG+ VEF I   S
Sbjct: 6   QSAARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGS 65

Query: 148 DGRSKAVDVTGPGEASVQ---GSRGGG---GGGGGGGYSSGGGG------GYGGGGGGGR 207
           DG++KAV+VT PG  S++    SRG G   GGGG G Y+ G  G      G GGGGGGG 
Sbjct: 66  DGKTKAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGE 125

Query: 208 GR-RGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDC 267
            R RGG G    G +G   R     G G   G   GG  G      C+ CG+ GH+ARDC
Sbjct: 126 RRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG------CYTCGDVGHVARDC 185

Query: 268 YQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFAREC 292
            Q  S G GD+ G   GG  G  CY+CG+ GHFAR+C
Sbjct: 186 TQK-SVGNGDQRGAVKGGNDG--CYTCGDVGHFARDC 213

The following BLAST results are available for this feature:

BLAST of ClCG02G004220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888820.1	1.5e-81	97.60	glycine-rich protein 2-like [Benincasa hispida]	[more]
XP_011658593.1	5.5e-81	95.79	glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_02...	[more]
XP_008448117.2	1.2e-72	95.00	PREDICTED: LOW QUALITY PROTEIN: glycine-rich protein 2-like, partial [Cucumis me...	[more]
XP_022989065.1	1.8e-71	89.57	glycine-rich protein 2-like [Cucurbita maxima]	[more]
XP_022928350.1	1.3e-69	89.42	glycine-rich protein 2-like [Cucurbita moschata] >KAG6589006.1 Cold shock domain...	[more]

BLAST of ClCG02G004220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27484	8.1e-51	71.09	Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1	[more]
Q38896	3.2e-39	59.91	Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 P...	[more]
Q41188	2.1e-38	57.02	Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1	[more]
Q94C69	7.6e-17	47.04	Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P...	[more]
O65639	8.7e-13	49.77	Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1	[more]

BLAST of ClCG02G004220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4M5	2.7e-81	95.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1	[more]
A0A1S3BIY4	6.0e-73	95.00	LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1JLC0	8.6e-72	89.57	glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486249 PE=4 SV=...	[more]
A0A6J1ERG9	6.2e-70	89.42	glycine-rich protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435206 PE=4 S...	[more]
A0A6J1HY03	2.5e-63	81.04	glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468487 PE=4 SV=...	[more]

BLAST of ClCG02G004220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21060.1	2.3e-40	59.91	glycine-rich protein 2B	[more]
AT4G38680.1	1.5e-39	57.02	glycine rich protein 2	[more]
AT2G17870.1	5.4e-18	47.04	cold shock domain protein 3	[more]
AT4G36020.1	6.2e-14	49.77	cold shock domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002059	Cold-shock protein, DNA-binding	PRINTS	PR00050	COLDSHOCK	coord: 95..110 score: 63.69 coord: 116..125 score: 64.04 coord: 131..149 score: 40.8
IPR002059	Cold-shock protein, DNA-binding	PFAM	PF00313	CSD	coord: 94..158 e-value: 2.7E-24 score: 84.8
IPR002059	Cold-shock protein, DNA-binding	PROSITE	PS51857	CSD_2	coord: 92..158 score: 31.374826
IPR002059	Cold-shock protein, DNA-binding	CDD	cd04458	CSP_CDS	coord: 93..158 e-value: 1.38226E-26 score: 97.2641
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 240..256 e-value: 1.4E-5 score: 34.5 coord: 277..293 e-value: 2.2E-5 score: 33.9
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 277..293 e-value: 2.4E-7 score: 30.5 coord: 240..254 e-value: 3.7E-7 score: 29.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 241..254 score: 11.053757
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 278..293 score: 11.284516
IPR011129	Cold shock domain	SMART	SM00357	csp_8	coord: 94..159 e-value: 6.1E-23 score: 92.2
None	No IPR available	GENE3D	2.40.50.140		coord: 85..169 e-value: 4.8E-28 score: 99.1
None	No IPR available	GENE3D	4.10.60.10		coord: 273..296 e-value: 6.4E-7 score: 30.9 coord: 236..265 e-value: 3.1E-7 score: 31.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..177
None	No IPR available	PANTHER	PTHR46565	COLD SHOCK DOMAIN PROTEIN 2	coord: 89..296
None	No IPR available	PANTHER	PTHR46565:SF8	COLD SHOCK PROTEIN 2	coord: 89..296
IPR019844	Cold-shock (CSD) domain	PROSITE	PS00352	CSD_1	coord: 106..125
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 231..294
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 89..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G004220.2	ClCG02G004220.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding