
ClCG02G003690 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCGGGCGAAACCCATTCCCAGGGTTGTGCATGTACCCCGCTGGGTAAAATAAAATCTTAAAAATATCATAAAGGGAATCCAATGTATATTTTAAGGTTATAATATTACGATTTTGTATTTGTTTCATTTTGGAAAAGACATTTAGTCGTTTAAAGTTAACTTTTATCAAATTTGTTATATAATAATAGTAATAATTCTTTCTTTTTTCAAAAGACGTGAATATATTTTAAAATCTTTCCATCAATACTTTTTTTTTCTTCTTTCTTTGAAAAATCAACAATAAACTAATAGTATAATTTTTTTTTTTGACATTTATTAAAAGTATATTGACAAAAATACCAAATTGGTATTTTAAAATATGATGATAGGTATATTGTGCTAATATAATTATGTCTTAAGTAATTTTTAAAGTGTATATTATGTTTAAGTCCAAGGTTTTAAATGTCGATATCTATTTTAGGGAATTATAATATTAGTAAAAGTATATATAAAATGTCAATAATGTTTGTTGATTTTTTTTTTAATTTGTTGTATTTCATCACGATGATTCATCCTTCATGTCAATTAGGGGTGTTCCTTCCAATCGTAGAAATTGAACCAAAACCAAAACCAAAACCGAAACAGAACCATAATGCATAGAAACCGAATTCTACGGTTTGGTTCGGTTTGTTTAAATGTAAAACTGTTTTTTTGTGGTTCGATTCGGTTTGGGCCATGAAATTGAAACCAAAATCGAATCGATTATAATATTATTAAAATATAGGTTAAAAAACACTTTTAATCCCTGAAAAGTAAGGAAAGGAAACGAGAGCGAGAGTGAGAATGAGAGCACACATGTCATTTTATCATAAACATCCTCTATCTCTCTCGCTCTCACTCTCGCTTATTTTGAATTATAGGATGAAAAGAGAAGGAAAATAAATAAATAAACCACAAAACCGAACCGCATCGCATATATGCCGTTCAGTTCAAGTAAACATGCAGTTTAGTTCGATTTCTGTATAAAAGAATTTCAAAATTTGTGGTTCGATTTGGTTTAAGCCCCAAACCGAACCGAACTGTGAACACCCATAATATCAATATCTAACCCGAACATAAATATGTTGATGAAAATAACACTTTCATCACATTCATCTTAAACAAACTCTAAATTTTTTCTTCTTTCTTCCTAACCAAACTCTTTCCATTTCTTCATTCTATCTTATTTCTTTAGGAGATACCTAAAAAAGTTGTATACATTGCTTAGTAATCAACGAACATTCCCCACTGAAAGCAAAGAAAACATCAGTGTTGGAGTTGGACTAAAAACCCTAAAAAAATGAGAAACGTTTCATTTTAGCAGCCAAATGGTATAATGATGGCAGCCTGTGGGCTGGGCCTAGCCAAAAGCCCCCTACCATAATAACAAACAAAGGCCCGTCCACCACCGTCATTGGGCTGAATTGTCAAATATACACACAAATGGGACTATTTTGCAAATTATATTTCACAAATGTCATCTTTTTAGAGGAATTATTGTATATAGTTATGAATAAATGCTTTTCTTTATTAGAGCTTTTGCGAGTTTGAATACCATAATTTTAGGAGAGGAGTGTGAATACTTTTCTTTCTACCTATCCAACTTTGAGTGTAGTGTTTATTGAGTCTAATAGCGATAAATGATGTAACTCTTTAAGATGGGGCATGATTCTTCGAGTGCATGTGTCTTTTGAGTCAATAGATACAATTGATATCAATGTATTGTGAATATCACAAACTCAAGAGAGGTAGTTACATACTGAACATTTGCATTCTTTTACTTATGGAGAAGATACATGTGTACAATAATAATAATAATAATAACAATAAATACGTTTGCTTACAATATTAAAAAAATTACTTAAAAAAAGTTAGTACAACAAATTAATTCTTTTATAAATTGTAAGTAAGTTTATAAAAGGAAAATTATCTTAAATGACAAAACTGTTGAAAATATTTACAACTAATAATAAAATACACAGTCTATTTGCGATAAACCGGGATAGACAGTGAAATTTTGCTATATTTATAAATATTTTGGTTCTTTTTGTTATATTTGAAAAGAACCCTTTATAAAATCGAGTTAAGAAAATTTTAACACAAAAAAGTTATAAAGAAAAAACAAATATTTTGGAGACAAAAAAGTTATTAAAATTTTCAAATAATGAGGATGGACAAAAATTTGAAAGAGAACATTTTAGTAAGGGAAACAAAGTCAGAAAGAGGAATAAAATTTTAGAGAGATAAAAAATACATATAATTAAAGATTTTTTTTTCTTTTGACAAAAAGACTAGAAAAAATGAGAAAAATAAAAGAAAAAGAATAGCCTAGAAGGACGAATAAAATAAAATTATTTTTATATTATTTCTATGATGACATCAAATCTTATTTAAATTCTACATTGATTTTGGATATAATTTGAAATAAGATTGAGTTATAACATAGATAATTTAACTTATAAGTTTGGTTTTGTTTTACTTATTATATTGTAGTTGTGAAAAATAAAATATTTGTATATGTTATAATATATGTTTCCACTTAATTTTTTGACAGTTGAATATTATTTTAAAACTTTAAATTCAAAATTTTTACATTTTCACGTGGATTGCATGCATTCTGTGGAAAAATAGGAAAAAAGAAAAGATATATATATAATTTTTTGAAACTAGGTTAGAACTTTTAATTTGCAACCAAACACCCCGAGTAAAGGAATGAGGAAAGGGAGCAAAGCAACTTTGATTTGTAATTGCTTTTGAGGAGATAGAAGCAATTACAAGCAAACCTTAACCCTTTCTTATATTTGGTAAAACAAATTTTGGAATTAATTAGGTTAAAAACACTTTTGTCATTCTCAAAATTACTCTATGATATAATTTTAATCCTTCAAAACTAATTTTGATGATATAAAAATTATATATAAAAATTAAATTTAAATATTAAATTAATTTTAAGTGATTAAAATCACTTCTAAATATGTACTATTTAGGATTGAATTGTTATAAATCAAAATTTAAAAACTAAATTGTTAATATAAGGGCAAAGGTAAATTTCAACCTTCAACAATCCAATTGAAAGGTAAAAGGTGTGCTGTAAAAAAAGAAAAAAAACTGCACAGTACAAAATATAGAACCCTCTAACTAAATGACAGCCATGGATTCCATCCAATTCCTTATCCATAATTTTCTCTTATCTCAGATTTTGCATACCCCACCTTCCAAAACGACATCGTTTGCCCTCTCCAAACCCTTCTTCCTCCACACTTCCCTTCTCCTTCTTCTTCTTCACAATCACAACCACATCCCCTTCCACCTCCGCCGTGCCTCCCTCCATGGACGCCGTGTTCGTAAACCAATCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCCCCTTCTTCCTCTCGAATCCCCCATCTCAATCTCCGCCGCAACCTCAAACATTTCACCCCTTCCTACGCCGTACAAAGCGATCAACCCCTCACACAACAAACCCAGAAATCAGAAGACGATGAATCGTACGGCGAAGTCGATGGAATCATCGGCAGTCGTGCTCTGTCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGGCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTTTGAAATCGATTATAGATTCTGCGGACGGACGAGATTTCGACGCTGTGGATGAAGATGGGAGGACGGCTCTTCTGTTTGTTGCTGGACTTGGGTCTAATCCGTGTGTGAGAATGTTAGCGGAAGCCGGTGCGAATCTCGATCACCGTGACAACAGCGGTGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGAGCGGATCCGGAAATTGAGGACGATAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGTGCGGTGGAGAGGGTGGTTTATGAGTATGCGGAGGTGGAACAATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTAAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTTTGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGAAAAAGCCTTTTCCCCTCCAAGTATGTATTTAAACTAGGGATTTTTTTTAAGATATTGTTATTG ATGCTTCGGGCGAAACCCATTCCCAGGGTTGTGCATGTACCCCGCTGGCCATGGATTCCATCCAATTCCTTATCCATAATTTTCTCTTATCTCAGATTTTGCATACCCCACCTTCCAAAACGACATCGTTTGCCCTCTCCAAACCCTTCTTCCTCCACACTTCCCTTCTCCTTCTTCTTCTTCACAATCACAACCACATCCCCTTCCACCTCCGCCGTGCCTCCCTCCATGGACGCCGTGTTCGTAAACCAATCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCCCCTTCTTCCTCTCGAATCCCCCATCTCAATCTCCGCCGCAACCTCAAACATTTCACCCCTTCCTACGCCGTACAAAGCGATCAACCCCTCACACAACAAACCCAGAAATCAGAAGACGATGAATCGTACGGCGAAGTCGATGGAATCATCGGCAGTCGTGCTCTGTCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGGCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTTTGAAATCGATTATAGATTCTGCGGACGGACGAGATTTCGACGCTGTGGATGAAGATGGGAGGACGGCTCTTCTGTTTGTTGCTGGACTTGGGTCTAATCCGTGTGTGAGAATGTTAGCGGAAGCCGGTGCGAATCTCGATCACCGTGACAACAGCGGTGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGAGCGGATCCGGAAATTGAGGACGATAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGTGCGGTGGAGAGGGTGGTTTATGAGTATGCGGAGGTGGAACAATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTAAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTTTGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGAAAAAGCCTTTTCCCCTCCAAGTATGTATTTAAACTAGGGATTTTTTTTAAGATATTGTTATTG ATGCTTCGGGCGAAACCCATTCCCAGGGTTGTGCATGTACCCCGCTGGCCATGGATTCCATCCAATTCCTTATCCATAATTTTCTCTTATCTCAGATTTTGCATACCCCACCTTCCAAAACGACATCGTTTGCCCTCTCCAAACCCTTCTTCCTCCACACTTCCCTTCTCCTTCTTCTTCTTCACAATCACAACCACATCCCCTTCCACCTCCGCCGTGCCTCCCTCCATGGACGCCGTGTTCGTAAACCAATCTCTCTCTCGCCTTAAACTTTCCCCTAAGCCCCCTCTCCCATTCCCCCCTTCTTCCTCTCGAATCCCCCATCTCAATCTCCGCCGCAACCTCAAACATTTCACCCCTTCCTACGCCGTACAAAGCGATCAACCCCTCACACAACAAACCCAGAAATCAGAAGACGATGAATCGTACGGCGAAGTCGATGGAATCATCGGCAGTCGTGCTCTGTCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCATCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTCGGCGAGTACGAAACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACGAATCTGCTTTGAAATCGATTATAGATTCTGCGGACGGACGAGATTTCGACGCTGTGGATGAAGATGGGAGGACGGCTCTTCTGTTTGTTGCTGGACTTGGGTCTAATCCGTGTGTGAGAATGTTAGCGGAAGCCGGTGCGAATCTCGATCACCGTGACAACAGCGGTGGGTTTACAGCGTTGCATATGGCAGCTGGGTATGTGAAACCAGAGACGGTGGAGTTGTTGGTGGAATTGGGAGCGGATCCGGAAATTGAGGACGATAAGGGTCGGACGCCATTGGTGTTGGCAAGGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAGAGTGATCGGTGCGGTGGAGAGGGTGGTTTATGAGTATGCGGAGGTGGAACAATTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTAAAATGGAAAGACGGAGAGGATAATGAATGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCGGATTTCGAAGCAGGGTTGGAGTATGCGGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGAGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTCAGGCTAATGTGGATCCTGATTTGGTTAACGAGTTTGAGAAGGCCCAGGCCCAACCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA MLRAKPIPRVVHVPRWPWIPSNSLSIIFSYLRFCIPHLPKRHRLPSPNPSSSTLPFSFFFFTITTTSPSTSAVPPSMDAVFVNQSLSRLKLSPKPPLPFPPSSSRIPHLNLRRNLKHFTPSYAVQSDQPLTQQTQKSEDDESYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVGEYETPWWTAAKKADESALKSIIDSADGRDFDAVDEDGRTALLFVAGLGSNPCVRMLAEAGANLDHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDDKGRTPLVLAREILKATPRVQFMRRLGLERVIGAVERVVYEYAEVEQLLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPQANVDPDLVNEFEKAQAQPQAQSSNGSAL Homology
BLAST of ClCG02G003690 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 684.5 bits (1765), Expect = 6.1e-193 Identity = 348/375 (92.80%), Postives = 357/375 (95.20%), Query Frame = 0
BLAST of ClCG02G003690 vs. NCBI nr
Match: XP_008447899.1 (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo]) HSP 1 Score: 630.2 bits (1624), Expect = 1.4e-176 Identity = 317/358 (88.55%), Postives = 335/358 (93.58%), Query Frame = 0
BLAST of ClCG02G003690 vs. NCBI nr
Match: XP_004153574.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 626.3 bits (1614), Expect = 2.0e-175 Identity = 315/355 (88.73%), Postives = 332/355 (93.52%), Query Frame = 0
BLAST of ClCG02G003690 vs. NCBI nr
Match: XP_022928488.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 604.0 bits (1556), Expect = 1.1e-168 Identity = 322/423 (76.12%), Postives = 351/423 (82.98%), Query Frame = 0
BLAST of ClCG02G003690 vs. NCBI nr
Match: XP_023529738.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 598.6 bits (1542), Expect = 4.4e-167 Identity = 310/375 (82.67%), Postives = 332/375 (88.53%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2) HSP 1 Score: 407.9 bits (1047), Expect = 1.4e-112 Identity = 220/362 (60.77%), Postives = 274/362 (75.69%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 7.0e-91 Identity = 187/374 (50.00%), Postives = 244/374 (65.24%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy Swiss-Prot
Match: Q06527 (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=Alvin_1094 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.7e-09 Identity = 49/127 (38.58%), Postives = 62/127 (48.82%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy Swiss-Prot
Match: Q9VL06 (E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.5e-08 Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy Swiss-Prot
Match: Q69ZR2 (E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus OX=10090 GN=Hectd1 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 3.3e-08 Identity = 33/103 (32.04%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1) HSP 1 Score: 630.2 bits (1624), Expect = 6.6e-177 Identity = 317/358 (88.55%), Postives = 335/358 (93.58%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1) HSP 1 Score: 626.3 bits (1614), Expect = 9.6e-176 Identity = 315/355 (88.73%), Postives = 332/355 (93.52%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1) HSP 1 Score: 604.0 bits (1556), Expect = 5.1e-169 Identity = 322/423 (76.12%), Postives = 351/423 (82.98%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 4.0e-166 Identity = 315/412 (76.46%), Postives = 348/412 (84.47%), Query Frame = 0
BLAST of ClCG02G003690 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 3.9e-153 Identity = 285/370 (77.03%), Postives = 316/370 (85.41%), Query Frame = 0
BLAST of ClCG02G003690 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) ) HSP 1 Score: 407.9 bits (1047), Expect = 1.0e-113 Identity = 220/362 (60.77%), Postives = 274/362 (75.69%), Query Frame = 0
BLAST of ClCG02G003690 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.9 bits (154), Expect = 3.6e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of ClCG02G003690 vs. TAIR 10
Match: AT4G35450.4 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.9 bits (154), Expect = 3.6e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of ClCG02G003690 vs. TAIR 10
Match: AT4G35450.2 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.9 bits (154), Expect = 3.6e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of ClCG02G003690 vs. TAIR 10
Match: AT4G35450.1 (ankyrin repeat-containing protein 2 ) HSP 1 Score: 63.9 bits (154), Expect = 3.6e-10 Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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