ClCG02G003390 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G003390
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RING-type E3 ubiquitin transferase
Location	CG_Chr02: 3322785 .. 3326656 (+)
RNA-Seq Expression	ClCG02G003390
Synteny	ClCG02G003390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTCCTCTATCATCGGGAGGCTTGAGGTCAGTCTCAGTTCTGATTTTAATTACACGTATTTGTATTTATTTTTTAGTTTAAAGATAAGAATCTTTGAAAATTTATTGCCAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCGTCTATTAAAAAAACAATGTAAGTTTGTTTTTCTTTCAGTTTCTTTTCTTGCCCTTACATGTGATTTGTAGGAATGCTAGAAGAAAAATTCTTAAACAAAAATTCGTAAACAAAAATAAAAGGCAATCGTGAACTTGAGCACGGTCGACTGGTTATGTCATATATCCTTTATGACCAAGAAGTTATAAGTTTGAATTTCCTCCAACACATGTTGTTAAACTAAAAGAAAAGACGATCATAAAGTTAATCCAAATCTAAGAAGCACATACACTTTAGCTTGACTGGTGTGTTTCGAACAATTGGACGCCCTGACATTTGTTGGACACGTATCTAACACTTGTTAATGCAACATATTTGTTAGATACAAGTAGTACAAAGTCAAAGTAGGTTCAACATATGTTAGACATGCATCAAACACTTGTTTAGTATACTAAATTGACACATATATAATAAAAGACAATAAAATTTGAGAGCAAAATACATCAAACTAATCTTTTAAGCATATAAATGCATAAACTCATTGATTTTGAATTTCTTTCTTGTATGAAAATGATATATATTCCAAAATATAAACTTCAATAAAATTTTCCTTGCCGTGCCCATGTCCTTGATTTTAAGAAATGGTGTGACCGTGTCTGTGTCATGTCGTATCCTTGTCCGTGCTTCTTAAGTCCAAATGGTCCGTTAAAGTATTCATGCTCTCTTGTTTTCATGAATGAAGAATCTGAATAAAGATCTCAGGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTAAGAATTTTTCTCCTCTTTTTATGTCAAGAAAGCAAACGTGCATATGCAGTGCAAATTAAAAACTGATCATGTTTGGTCCGGATTGGAGTTTGTTTTTTCAATTAGTTTTGGGACTTCTTTTTGTCGGATTAGTTTTTTACGCCCTCGTATATTCTTTCATTTGAAAATTCGACTCTTGATCATGGTAGGAGGAAACCAACTAACCTATGAAAGTCAGATTTATATCAACTATGTTGGCTTCTTTATTAGTTGTTCCATTTTCAAGAAAATACATGTATATCTTTATTGAATTCTCAATTATATATTCTGCTTGAAGCATTTGCTTATGTTACAATACGCCTATATTTATGTTTTTGGCTTCTTAATAAACTTGTTTCAATTTCTTTAGGTACAATCTTAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGTAATTTTCCTCTCAGTTGAGGAATTTGATGGGATGTTCTGGTTGTAATTAGTGGATTAACGAAGTTGGTAGTGTAAGGGAAAAAAGCACTTGGTTTTGGAGCTTCAATTTTCTTCTGATAGTTGCATATGAAACATCCTTTTCTAGTAATTTTCTTCTGATAGTTGCATATGAAACTCAAGAACACACCGAACAAAACAAGAAAGCTAAAAGATAGAATTTCAATCAAGTTCTCGAATTCATTCCCCTTGCCTTTTGAGCTGAGCTGAGGAAAATGTGAAGAATTTCCATTTTATGAGCTTGTAAAGCTTTAAGAGAGAATAGGGAGTAAGTAAGGGGAAAAAGAGGCTATAAGTAGGCCGTTTGCTATTGCTAGTTGGGCTGCTTGCCTTTATACGGCTTGGCTTCGCTATCGCTCATGACTTGTATTGTGGTCGGCCTAAAAAGTCGTATTCCTACCATAAAATAATGCTGATTATCTAGAATTATATTGTAATATAGAAATTACAATATACCAAAGAACAAAACAAGAAAGCTAAAAGATGGAATTATATTGTAATATCAATAAAGAAATTACAATATACCTCAACACATTTTAGAGGGCCGAGCATCCTCTCCCAAATTGTGATCTCACTTGAACTTTCATATTCAACTCCCGTTTCCTGTTTTTCTGGTATTTTCTTCGTTGATTCTTCTTTCTCTTCTTTGATATCAGCTAATCCTCTCTCCTCTCTTTCTCTATCTCTCTACAAAGATTTAATGAGCTTTTGTTGCAATGCTCTCACATTTCTTTGTATCTCCAACAATACTTCCATCCTCGGATCAAGATCCATTACTAAAAATGAATTTACAAGATGAACAGCTTTGATACCAATTTGTCACCTAACAAGAAAATACTCAAGAACACATTAATAAACTCTAGGACAATCAAATATGGAAATATATTGAAATATGCTATAATATCATAGAAAATAACAAGATAACCCCTAGCCTTTAAAGAGGGCTAGGCTCTCCCTAAATTCCCCAGTTAGAAAATCCACAAAATTCTTCTCCCCTTCCTAACACTCTCACTCCTTCTATTTATAGCAATATTTAGTAACTAGCTTCCTATCTAATAACCCTTACACCCCTTACTACTAATCATACTAATTATCCCAATATATATCTAACTAGGGGCCTAACATGATGGCCTTCAACTATCATCTTCTTTTCCCACTCCAAATTATGTTATTACTATGGCCTATTTCTTCCCCTCTGAAAATATTTGTATCTTGAATTGTTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTCGGAAAGAGGAAGGTTAGTAGATCTTACTTTCAGCACATTGTGTATTGAACTTTATTGATGAATGTGTATTGTTTAACTCGTAAGTTGAAAAGTATCAAATTAGCGAGTTAAATGAACCTTGTAATATGTATATTAGAAAGTAAGATGGGTTATGGTAATTGTTATCTCTTGAAAATGTTTTATTTTTTTTTATTTTTTTATTTTTGGGAGAAGAAAGGGAAACGATTATCTCCTAAAAAATGTTGAAATGTTCAACCTTCAATGTTAATGATTCCATTCTTCTGGGTGCAATGTTTGCTTCTATTTTCACGCTTTCTTTGTGTACATTTCTCGGCCTTTTGGCTAAGATCATGTGTTGTATATTTTCTTATCCTAGTGGCTTTCATTGTCATGGACCTTTTGTTTGGCTTTTCTCCAATTTTTAATGAAGCACTATCTTGAAGTAGTTGTGTGGTCCGGACTTTCAAGTGTTCGTTTACCACTACAGAGGTATTTTTTTAATTATTTTTCCCCTACCATTTTACAATTACGGTTGAGTGGTTTAAATATGACTACCTCTCAGTGGACTTTCTTCTTTCTTTTATAAAAGATGAAGATTATTATCTCTCTCGTTAGAGAAGTTCTTTTTGCCGAAGCTATTTATAAGCCCTCAAATAGGCAACTCCGAAAGAGGGAATTGATTTTTGAGTATGGAAAATCTCTGAATTTAAATCACTTCACATATATACTTAATATTGGGCATTATAGAAATCAGCTGCCAGTCTTGCTTCTCCGTTATATCTGTCTGTGATGGCCTTTGGCCCTTTACCAGATTTGACGTCTCCTCTCAATTTATACTGA

mRNA sequence

ATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTCCTCTATCATCGGGAGGCTTGAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCGTCTATTAAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTCGGAAAGAGGAAGCTGCCAGTCTTGCTTCTCCGTTATATCTGTCTGTGATGGCCTTTGGCCCTTTACCAGATTTGACGTCTCCTCTCAATTTATACTGA

Coding sequence (CDS)

ATGGAGGCCATGGTCAAAAAGTATCAGGAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGATGATCTTCAAGTTCGTTTGATTTCACAGTTCCAAAATGCTTCCTCTATCATCGGGAGGCTTGAGTTGCTTCAAGATCCTAAGAATTTTGGAAGTCTGTCTGGCATGGATGGAATTGTAGATGCGTTATTGGGGAAGCAGATGGAATCCTTGCAACTTAGTTTCTCGTCTATTAAAAAAACAATGGAAGAACTTGGGAATGTTGTCCGTTCAATGGAGAAGATTTATCGTGATGGAAAGCAATTAGTCAAAGGTGGTTCCAATCAGCCATCAATAAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGCCTTGAAGATTGCTTGAACGGGTTGATGCTTCTCTGCAACATGCACCGCTCTGAGTACAATCTTAAAGAATCTATCGTCTCAGCACTTCCAGAACTATTTTGGAAAGCTAGGAATCCTAGAGCGCAAGATCTCAGCTCCTTACAGCAACTCTTGGTTGACCAACCTAACATTCGGAAAGAGGAAGCTGCCAGTCTTGCTTCTCCGTTATATCTGTCTGTGATGGCCTTTGGCCCTTTACCAGATTTGACGTCTCCTCTCAATTTATACTGA

Protein sequence

MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDGIVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQRVGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQPNIRKEEAASLASPLYLSVMAFGPLPDLTSPLNLY

Homology

[Close]

BLAST of ClCG02G003390 vs. NCBI nr
Match: XP_008447827.1 (PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91
Identity = 176/187 (94.12%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 187

[Close]

BLAST of ClCG02G003390 vs. NCBI nr
Match: XP_004144893.1 (uncharacterized protein At5g43822 isoform X2 [Cucumis sativus] >KGN43347.1 hypothetical protein Csa_020516 [Cucumis sativus])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 174/187 (93.05%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 187

[Close]

BLAST of ClCG02G003390 vs. NCBI nr
Match: XP_008447828.1 (PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88
Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR---LQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 184

[Close]

BLAST of ClCG02G003390 vs. NCBI nr
Match: XP_016900442.1 (PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 1.2e-88
Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSD--LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 185

[Close]

BLAST of ClCG02G003390 vs. NCBI nr
Match: XP_038888509.1 (uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888510.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888511.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888512.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888513.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888514.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888515.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888516.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888517.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888518.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888520.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888521.1 uncharacterized protein At5g43822 isoform X1 [Benincasa hispida])

HSP 1 Score: 336.3 bits (861), Expect = 2.0e-88
Identity = 173/187 (92.51%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDE+DRWD+LQVRLISQFQN SSIIGR++LLQDPKNFGSL+GMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEIDRWDELQVRLISQFQNVSSIIGRVQLLQDPKNFGSLAGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALLGKQMESLQLSFSSIKKTMEELGN+VRSMEKI RDGKQLVKGGSNQPS+KQLQQR
Sbjct: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNIVRSMEKINRDGKQLVKGGSNQPSMKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSAL ELFWKA   RAQDLSSLQQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALSELFWKA---RAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEE 188
           PNIRKEE
Sbjct: 181 PNIRKEE 184

[Close]

BLAST of ClCG02G003390 vs. ExPASy Swiss-Prot
Match: Q6NPG7 (Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 87/196 (44.39%), Postives = 137/196 (69.90%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEA+++K+Q++FRK K+EM++W+ LQVR +S F+NASSII RL+ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           +G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K   P   DL++LQ L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILK---PSPGDLNALQYLVVDQ 180

Query: 181 PNIRKEEAASLASPLY 197
           PNI K+E   +   ++
Sbjct: 181 PNIPKDEVQHIFDVIF 190

[Close]

BLAST of ClCG02G003390 vs. ExPASy TrEMBL
Match: A0A1S3BIA7 (uncharacterized protein At5g43822 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 9.3e-92
Identity = 176/187 (94.12%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 187

[Close]

BLAST of ClCG02G003390 vs. ExPASy TrEMBL
Match: A0A0A0K4X9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.0e-91
Identity = 174/187 (93.05%), Postives = 182/187 (97.33%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALL KQMESLQLSFSSIKKTMEELGN+V SMEKIYRDGKQLVKGGSNQPSIKQLQQ+
Sbjct: 61  IVEALLAKQMESLQLSFSSIKKTMEELGNIVNSMEKIYRDGKQLVKGGSNQPSIKQLQQK 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLMLLC+MHRSEYNLKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMLLCHMHRSEYNLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 187

[Close]

BLAST of ClCG02G003390 vs. ExPASy TrEMBL
Match: A0A1S4DWT4 (uncharacterized protein At5g43822 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.6e-89
Identity = 174/187 (93.05%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGRL+LLQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGRLQLLQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRS+  LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSD--LKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 185

[Close]

BLAST of ClCG02G003390 vs. ExPASy TrEMBL
Match: A0A1S3BIY0 (uncharacterized protein At5g43822 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490205 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.6e-89
Identity = 174/187 (93.05%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQFQNASSIIGR   LQDPKNFGSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFQNASSIIGR---LQDPKNFGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IV+ALLGKQMESLQLSFSSIKKTMEELGNVV SMEKIYRDGKQLVKGGSNQPSIKQLQQR
Sbjct: 61  IVEALLGKQMESLQLSFSSIKKTMEELGNVVNSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGLM+LCNMHRSEY+LKESIVSALPELFWKARN  AQDLSSL QLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLMVLCNMHRSEYSLKESIVSALPELFWKARNHGAQDLSSLHQLLVDQ 180

Query: 181 PNIRKEE 188
           PNI+KEE
Sbjct: 181 PNIKKEE 184

[Close]

BLAST of ClCG02G003390 vs. ExPASy TrEMBL
Match: A0A6J1EQT0 (uncharacterized protein At5g43822 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435044 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87
Identity = 169/197 (85.79%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEAMVKKYQ+RFRKFKDEMDRWD+LQVRLISQF NASSIIGRL++LQDP N+GSLSGMDG
Sbjct: 1   MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFTNASSIIGRLQVLQDPNNYGSLSGMDG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           IVDALL KQMESLQL FSSI KTMEELGN+VRSMEKIYRDGKQL+KGGSNQPS KQLQQR
Sbjct: 61  IVDALLAKQMESLQLVFSSIIKTMEELGNIVRSMEKIYRDGKQLIKGGSNQPSTKQLQQR 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           VGLKPSLEDCLNGL LLC+MHRSEY+LKES+VSALPELFWK RN  AQDLSSLQQLLVDQ
Sbjct: 121 VGLKPSLEDCLNGLRLLCDMHRSEYHLKESMVSALPELFWKPRNHSAQDLSSLQQLLVDQ 180

Query: 181 PNIRKEEAASLASPLYL 198
           PNIRKEE       +YL
Sbjct: 181 PNIRKEEGRGSFKDIYL 197

[Close]

BLAST of ClCG02G003390 vs. TAIR 10
Match: AT5G43822.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 161.4 bits (407), Expect = 8.2e-40
Identity = 87/196 (44.39%), Postives = 137/196 (69.90%), Query Frame = 0


Query: 1   MEAMVKKYQERFRKFKDEMDRWDDLQVRLISQFQNASSIIGRLELLQDPKNFGSLSGMDG 60
           MEA+++K+Q++FRK K+EM++W+ LQVR +S F+NASSII RL+ +Q+  ++G+L  + G
Sbjct: 1   MEAVIRKWQQKFRKGKEEMEKWEALQVRWVSLFRNASSIIQRLQEMQNHGSYGALRCLKG 60

Query: 61  IVDALLGKQMESLQLSFSSIKKTMEELGNVVRSMEKIYRDGKQLVKGGSNQPSIKQLQQR 120
           I DA++ +QM  L+    S+K  MEE    V + EK++RDG QL +  S++   +++++R
Sbjct: 61  IEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK---RRVEER 120

Query: 121 VGLKPSLEDCLNGLMLLCNMHRSEYNLKESIVSALPELFWKARNPRAQDLSSLQQLLVDQ 180
           +G+KP + DCL GL +L +MH+SEY+LK SI+S L  L  K   P   DL++LQ L+VDQ
Sbjct: 121 IGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILK---PSPGDLNALQYLVVDQ 180

Query: 181 PNIRKEEAASLASPLY 197
           PNI K+E   +   ++
Sbjct: 181 PNIPKDEVQHIFDVIF 190

The following BLAST results are available for this feature:

BLAST of ClCG02G003390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447827.1	1.9e-91	94.12	PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]	[more]
XP_004144893.1	1.2e-90	93.05	uncharacterized protein At5g43822 isoform X2 [Cucumis sativus] >KGN43347.1 hypot...	[more]
XP_008447828.1	1.2e-88	93.05	PREDICTED: uncharacterized protein At5g43822 isoform X3 [Cucumis melo]	[more]
XP_016900442.1	1.2e-88	93.05	PREDICTED: uncharacterized protein At5g43822 isoform X2 [Cucumis melo]	[more]
XP_038888509.1	2.0e-88	92.51	uncharacterized protein At5g43822 isoform X1 [Benincasa hispida] >XP_038888510.1...	[more]

BLAST of ClCG02G003390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPG7	1.1e-38	44.39	Uncharacterized protein At5g43822 OS=Arabidopsis thaliana OX=3702 GN=At5g43822 P...	[more]

BLAST of ClCG02G003390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIA7	9.3e-92	94.12	uncharacterized protein At5g43822 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0K4X9	6.0e-91	93.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025190 PE=4 SV=1	[more]
A0A1S4DWT4	5.6e-89	93.05	uncharacterized protein At5g43822 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A1S3BIY0	5.6e-89	93.05	uncharacterized protein At5g43822 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1EQT0	1.8e-87	85.79	uncharacterized protein At5g43822 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of ClCG02G003390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43822.1	8.2e-40	44.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	PANTHER	PTHR37904:SF2	OS10G0566900 PROTEIN	coord: 1..191
IPR029159	Casein Kinase 2 substrate	PFAM	PF15011	CK2S	coord: 7..174 e-value: 1.7E-43 score: 148.3
IPR038985	At5g43822-like	PANTHER	PTHR37904	OS10G0566900 PROTEIN	coord: 1..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G003390.2	ClCG02G003390.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005635	nuclear envelope