ClCG02G003170 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G003170
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Mitochondrial transcription termination factor family protein
Location	CG_Chr02: 3108165 .. 3113168 (+)
RNA-Seq Expression	ClCG02G003170
Synteny	ClCG02G003170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGACTTGAAGATGAAACACCTAAATTACGGAGTGGGCAAGTACGCTTGTTATGCCCTGATCCCTTGCATATCCCACATCGAACTTTCGTATCAAATACCATTCTTTTTTGTATTATACTAGATGTACATTTTTTCCTTTCCTCCAAGGTTGATCCTTATTCACAAACTGAATCAATAATTTCCCTTCTATCTGTGTAAATATCTCCAACTAAACCAACTCATTTTCATTTTCTATATTTCCTTCTTCTCCAAACAATTCATCAATTTCTACATCAATGTCACTATCCCCACAATCTCCAGGTTCAATAATAACTAAATCTTCTGGACGAAACAACATATTTAAATTTGTTTACAACTGTAAAGGTTAAAAAAAAAATTAGTCCAAATCTACCTAAAATTATAAAACTCGTGGACCAACATAACTAATTTACCACCATATTATTTACCAATAATTATTCCTACAACAATAAACGCCGAATAACAATCAACACTAAAAGCTAAATTTTTTAAATTATAAACAAAATAAACTATTTGATAAAAACGTCTACACATAGAAATTTATTCGATTTGGTAGAAACGTCTACATATACAAATTTATTCATGCATGCAAAACAAAACTTACAATCTATACATATTTATCATATAACTAGTGCATATATAAGATAATTAGAAAGAAAAATGTATATACATACGTATATGGCGGCAGCGGCAGCGGGGCGGTTGAACGAATATGATATGTTAGATTTAACAAAGAAATAGTGATGGGATGGTCGGAAAATCAATATCTATATACATACCTATGTGACAGCGACAATGTCGACAAACGACGAACAATGGACAACAAAAAACGTGCAAGATGATCGGAGAATGAAGAAACGAAGAGATTTCCGGTGGAGAGAGAGGAAATGGGCGGCGGGGACGGCGGAGAGAAAGGAGAGAAATGAGAGAAAAGAAAATTGTTTGAGAAAAATAGGTGGCCGGCGGGAATAAAAAGGGGGGACTTGTGGACCGGGTCCACGATTATCGAAATCATGGACCCCGTCCATGAGTTCGGTCAAACCTGCATGCATGCAGCAGGCTGACGGGGTGGCAGCGGGTTGGCAGGGTAATCATGTACCCGGCATATGATTCCACAACTCCAATTTTGGTATTTGTTTCCCCACACTATTTTTGGAATTATTTATTAAAAAAACATTATTTAAAAAAAATTCCAATTATAATGGTTGAATTATTAGTCAAATTTCAAAAATAGAAACAAAATTTTAAAAGCTACTTTTTTTTAGTTTTCAAATTTTGATTTGGTTTTTTAAACCAACGGTACAAAGTAAATAACAAAAGAAGAAATTTGGAGGTAGAAGTAGTGTTTAGAAGTTTAATTTTAAAAAACAAAACAAAAAACCAAATAGTTACCAAATGGGGTCTTCGTTTTTTGTTTTTTGTTTTTGAAAAATAAGCCTATTTCCTTTCACTCTTTTTTATAGTGATTTGTATCTTTCTCAAATGCAATAGTTGATTTCTTACCCAAATTCTAAAAACAAAAATAAGTTTTTAAAAACTATTTTTTTAGTTTTCAAAATTTGCCTTGATTTTTTAAAACACAAGTAAAAAATAGATAACAAACCAAGAAATTTAGAGGTGGTATCAGTATTTATAGGCTTAACTTTCAAAAACTAAAAACAAAAAGTTGGGTCATTTAGTAACTATTTTGTTTTTTGGTTTTGATTTTTGAAAATTAAGCATATTTTATCCCCATTTCTTTTAACAATTTTCATCTATCTAAGTACACTGGTTGAATTCTTAGCTAAATTTCAAAAACAAAAACAAGTTTTTAAAAGCTACTTTTTTTAGTTTTTAAAATTTGGTTTGGTTTTTTAAATTATTAGTAAAAACTAGACAATAAATGAATAAATTTGGAGATAAAATTAATGTCTATAAGCTTAATTTTTTTTTTTTTTTTTAAAAAAAAGAACCAAATAGTTATAAAACTATTACCAAAACCGACCTTTAATTAATAAGATTGTAACTCTCCCGCGATATTTATTTAAATAAAATATATTAAAGAGTTTTAATTGTTATTTCCCTAAATTTTATCAATTACACGGTTGCAACTTGCAAGAAAATTCTTGATTTCGGTTCACTCTTCACTGTCCCTCAACTCTCAACTTATCCATTTCGTACAAAGTTAAACAAAATTGCTTCGTCTTGCCAAGCTCGAACACTGATGCTTTTTGCTCTATGTTCTTCTTTCAAGACCCAGAAATCCTTCTTCTGTAGCTTCGATTACCTCAAATTTTCCTCACAATTAGAGCTTTGATCGAGCGCAGAAAACAATAGAGACTTCTTGCTTATCCATCTGATTTGAAGAAGGTGATCCCGATTTTTTCTTGTGTTTATTATCGCCATTCTGCACTGCATTTCTCTTTTTAATTTGAAGGGTTTCTGAATTTAGAGTTTAATTCCAATTTCCTTTCTTAATCTTGCATTTACTTGTTTGTTCTTGTACTGTCTTTTCTACAAACACTTGGTGGGTTTATGAAAATTCTGTTTGTATGCTGAATCTTTCAGGGTTTATGGAAATTAGCGCCAGTCGACATGGTAATTGTATGCTGTGGTTCTTCAGGGATAAAGGTTTTGATGATAGAAGCATTGATAAGATGTTTAGAAAGTGTAGGCGTTTGGAAGATATGCAGAAGGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTTGTTCCTATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTAATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCCTATGGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCACCTTGGAAAGATGATCCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAGCTCGTTGAAACTGTAGATTTTCTTGCTGGGTTTGGGCTAACGAAGGAGGGAGTGATTGGAAAAGTTCTTGCAAAAAATCCATTTCTTATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTTCGGAGTTTCTGAAATCAATTGGTCTAAATGAGATAAATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGATAAAGTTTTGAAACCCAATTTGGATTATCTAAGGAGATGTGGATTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAAAACTTAACGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAGACTTGAGTTGCGGCATAGATTGTTGAAAGAGAAGAAGGTGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTTTGTTATGAGGCTATATCTGGAGTTTTAGGTCCTCATATCCTGAAAGAATGTTGTTTTCTCACCATCTTTATAAGTTTTGTTGCTTAATTATTAATTTTCCAGACTTCTAGTTAAAGTGAAGAGCATTGGTCCTGCCGAGCAATTGTCTTTAGGCCTGGATTATTCTTGTCCTCCATTCATACTTCATGCTTTAGGCGCTTAATGATGTCCCTTGTGTTTTAACAATTTGAATGGAGTGGAGTCCATACAGAGTACCCTCTTGTAACTCCTTTCTCTATTTTGTTTAGGTAGAGATTTGGACCCCTGGTCTTCTCTTGTAGTTTTCTTCTTTAATGTCGAGAATTTTTGGTGCCACAACTTGTACTCTTCTTCGACCCATTATTCTTAACAGTTACAAAGGAATTTTGCGTTCTTTGGCTTCTGGGGAGTCATCTCTTGATAAATCAAAAGATGTTTATTACTTGGAAACTTTGAGTATGAATCGTGTTGGTGTGCAGTTTATATCAGTATTTACATTTTTCTATAATTTACACCTCTCAGACAATAAATTTCTTGAATCTATGCCCAGACTACTCCACGGCCAAAGAATAAGGATATGGCATTATTCATTAGGATGCTTCATTCTTTTCAATGCTGATCTCATCCTGACGAATACCAAACCATTTTTTCTTACCATATTATGTATTGCCATTCCTATTTTCTAACACTTGCATCATTATCTTGAGGTCTTTTGTTGTTGCAAGATTAAACGTAATTCTCTGTTTCTCATAAAGAGAATAAAACCGATTAAACATTATTAAAATGTGTAATTTTTGGGATCAGATAGAAGATGATAGTAACTACTTGGACTTAATTTTTCTATAATCTTTTGTAATTGCTCTTTGAATTTATAAAGAAAACTTGTCAATTGTATCTGTAAAGCAAAAATGATGTAGGAGCTTTAAGTATTCCCCTTAAATGTAATCTTCGGTAATACCTTTGTATTTAGTAAGCTTAGTTATATGTCCTTTTATTTGGTTTAATGTCTCTGGCTATCCAGGTTACCAAAACTGGCTACCTTTCTTGTATAAATTGGCTTTTAGTCATCAGTTTTGATTCATTAATAAAGATTATCTTTTGAGATTCTTGGAGCATTTGCATAAAAAAATAATGGTACATTGAGTAGGGTTGTCTGGCAGCACAGAGAATAGGATGTTTTGATGATGTCTGTAGGCAAAGAAGAAGAAGAAAAAAAATTGAAGTTTCATACATACAAGTGCGCTGTGCATTGTGCAGAAACAGCCTGAGGGGCCTCTCGGGACATTGGGAGTTTGAGCCCAGGTATACATATCCTATCCCCTCGCATATGTCAAAGTGAGAATCATAACAATAATAAACACATGATATTTTCTACACCAATTTAATGACGTGCTACATGATTTTCAGATACGTTGTGGTAGCTATGGTATAA

mRNA sequence

ATGAATGACTTGAAGATGAAACACCTAAATTACGGAGTGGGCAAGTACGCTTGTTATGCCCTGATCCCTTGCATATCCCACATCGAACTTTCCAGGCTGACGGGGTGGCAGCGGGTTGGCAGGGTAATCATGTACCCGGCATATGATTCCACAACTCCAATTTTGAGACTTCTTGCTTATCCATCTGATTTGAAGAAGGGTTTATGGAAATTAGCGCCAGTCGACATGAAGGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTTGTTCCTATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTAATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCCTATGGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCACCTTGGAAAGATGATCCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAGCTCGTTGAAACTGTAGATTTTCTTGCTGGGTTTGGGCTAACGAAGGAGGGAGTGATTGGAAAAGTTCTTGCAAAAAATCCATTTCTTATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTTCGGAGTTTCTGAAATCAATTGGTCTAAATGAGATAAATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGATAAAGTTTTGAAACCCAATTTGGATTATCTAAGGAGATGTGGATTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAAAACTTAACGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAGACTTGAGTTGCGGCATAGATTGTTGAAAGAGAAGAAGGTGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTAGAGATTTGGACCCCTGGTCTTCTCTTGTAGTTTTCTTCTTTAATGTCGAGAATTTTTGGTGCCACAACTTAAACAGCCTGAGGGGCCTCTCGGGACATTGGGAGTTTGAGCCCAGATACGTTGTGGTAGCTATGGTATAA

Coding sequence (CDS)

ATGAATGACTTGAAGATGAAACACCTAAATTACGGAGTGGGCAAGTACGCTTGTTATGCCCTGATCCCTTGCATATCCCACATCGAACTTTCCAGGCTGACGGGGTGGCAGCGGGTTGGCAGGGTAATCATGTACCCGGCATATGATTCCACAACTCCAATTTTGAGACTTCTTGCTTATCCATCTGATTTGAAGAAGGGTTTATGGAAATTAGCGCCAGTCGACATGAAGGAAAGAGCTTCTGAAAACTGGGAATATTTGGAAAGAATTGGGATTCAAAAGAGGAAACTCCCTTCTGTTGTTTCCAAATGCCCTAAGATTTTAGCTCTTGGTCTTCAAGAGAAACTTGTTCCTATGGTTGAGTGCCTTGCAACACTCAGCACTAAGCCTAATGAAATTGCTTCAGCTATTGCTAAATTTCCTGGCATTCTTTCCTATGGTGTTGAAGAGAAGCTATGCCCACTTTTGGCTTTCTTTCAAGCATTGGGTGTCCCTGAAAAGCACCTTGGAAAGATGATCCTACTCAACCCGAGGCTTATTAGTTACAGCATTGAATCGAAGCTCGTTGAAACTGTAGATTTTCTTGCTGGGTTTGGGCTAACGAAGGAGGGAGTGATTGGAAAAGTTCTTGCAAAAAATCCATTTCTTATGGGTTATAGTGTTGATAAAAGGCTCCGCCCGACTTCGGAGTTTCTGAAATCAATTGGTCTAAATGAGATAAATCTTCAAGCAGTTGCATTGAAATTTCCAGACATTTTGTGTAGGGATGTGGATAAAGTTTTGAAACCCAATTTGGATTATCTAAGGAGATGTGGATTTAAAGATGGAGAAATAGTGTCTTTGGTGACTGGTTATCCTCCTATTTTGATCAAGAGCATTCAACATTCTTTAGAACCTCGGATCAGATTTTTAGTCGAAATAATGGGAAGAAAACTTAACGAAGTTGCTGAATATCCTGACTTTTTTAAGCATGGTTTGAAGAAAAGACTTGAGTTGCGGCATAGATTGTTGAAAGAGAAGAAGGTGGACTTTACCTTGAGTGAATTGTTGGAATGCAATCAAAAGAAGTTTATGATGAAAATGGGTAGAGATTTGGACCCCTGGTCTTCTCTTGTAGTTTTCTTCTTTAATGTCGAGAATTTTTGGTGCCACAACTTAAACAGCCTGAGGGGCCTCTCGGGACATTGGGAGTTTGAGCCCAGATACGTTGTGGTAGCTATGGTATAA

Protein sequence

MNDLKMKHLNYGVGKYACYALIPCISHIELSRLTGWQRVGRVIMYPAYDSTTPILRLLAYPSDLKKGLWKLAPVDMKERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDVDKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAEYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMGRDLDPWSSLVVFFFNVENFWCHNLNSLRGLSGHWEFEPRYVVVAMV

Homology

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BLAST of ClCG02G003170 vs. NCBI nr
Match: XP_038887558.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 548.9 bits (1413), Expect = 3.7e-152
Identity = 273/286 (95.45%), Postives = 283/286 (98.95%), Query Frame = 0


Query: 77  KERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASA 136
           KERASENWEYLERIGIQ+RKLPS+VSKCPKILALGLQEKLVPMVECLATLSTKPNEIASA
Sbjct: 41  KERASENWEYLERIGIQRRKLPSIVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASA 100

Query: 137 IAKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLA 196
           IAKFPGILSY VEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDF A
Sbjct: 101 IAKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFFA 160

Query: 197 GFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRD 256
           GFGL KEGVIGKVLAKNPFLMGYSVDKRLRPTSEFL+SIGLNE++LQAVALKFPDILCRD
Sbjct: 161 GFGLMKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLRSIGLNEMDLQAVALKFPDILCRD 220

Query: 257 VDKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVA 316
           VDKVL+PNLDYLRRCGFKDGEIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVA
Sbjct: 221 VDKVLRPNLDYLRRCGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVA 280

Query: 317 EYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           EYPDFFKHGLKKRLELRHRLLKEK++DFTLSELLECNQKKFMMKMG
Sbjct: 281 EYPDFFKHGLKKRLELRHRLLKEKQMDFTLSELLECNQKKFMMKMG 326

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BLAST of ClCG02G003170 vs. NCBI nr
Match: XP_008451174.1 (PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 2.1e-147
Identity = 268/285 (94.04%), Postives = 278/285 (97.54%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AI
Sbjct: 42  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 101

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG
Sbjct: 102 AKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 161

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEGVIGKVLAKNPFLMGYSVDKRLRPT EFLKSIGLN+++LQAVALKFPDILCRDV
Sbjct: 162 VGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDV 221

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+ NLDYLR  GFKDGEIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVAE
Sbjct: 222 DKVLRSNLDYLRSRGFKDGEIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAE 281

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YPDFFKHGLKK+LELRHRLLKEK VDFTLSELLECNQKKFMMKMG
Sbjct: 282 YPDFFKHGLKKKLELRHRLLKEKNVDFTLSELLECNQKKFMMKMG 326

[Close]

BLAST of ClCG02G003170 vs. NCBI nr
Match: KAA0059582.1 (transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 transcription termination factor MTERF6 [Cucumis melo var. makuwa])

HSP 1 Score: 533.1 bits (1372), Expect = 2.1e-147
Identity = 268/285 (94.04%), Postives = 278/285 (97.54%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AI
Sbjct: 49  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 108

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG
Sbjct: 109 AKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 168

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEGVIGKVLAKNPFLMGYSVDKRLRPT EFLKSIGLN+++LQAVALKFPDILCRDV
Sbjct: 169 VGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDV 228

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+ NLDYLR  GFKDGEIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVAE
Sbjct: 229 DKVLRSNLDYLRSRGFKDGEIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAE 288

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YPDFFKHGLKK+LELRHRLLKEK VDFTLSELLECNQKKFMMKMG
Sbjct: 289 YPDFFKHGLKKKLELRHRLLKEKNVDFTLSELLECNQKKFMMKMG 333

[Close]

BLAST of ClCG02G003170 vs. NCBI nr
Match: XP_004144567.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sativus] >KGN43380.1 hypothetical protein Csa_020537 [Cucumis sativus])

HSP 1 Score: 527.7 bits (1358), Expect = 8.8e-146
Identity = 267/285 (93.68%), Postives = 275/285 (96.49%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AI
Sbjct: 42  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 101

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAG
Sbjct: 102 AKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAG 161

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEGVIGKVLAKNPFLMGYSVDKRLRPT EFLKSIGLN+++LQAVALKFPDILCRDV
Sbjct: 162 VGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDV 221

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+ NLDYLR  GFKDGEIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL EVAE
Sbjct: 222 DKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAE 281

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YPDFFKHGLKK+LELRHRLLKEK VDF LSELLECNQKKFMMKMG
Sbjct: 282 YPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKFMMKMG 326

[Close]

BLAST of ClCG02G003170 vs. NCBI nr
Match: XP_022135779.1 (transcription termination factor MTERF6, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 523.5 bits (1347), Expect = 1.7e-144
Identity = 261/286 (91.26%), Postives = 274/286 (95.80%), Query Frame = 0


Query: 77  KERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASA 136
           KERASENWEYLERIGIQKRKLP VVSKCPKILALGL EKLVPMVECL TLSTKP+EIASA
Sbjct: 46  KERASENWEYLERIGIQKRKLPFVVSKCPKILALGLHEKLVPMVECLGTLSTKPHEIASA 105

Query: 137 IAKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLA 196
           IAKFPGILSY VEEKLCPLLAFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLA
Sbjct: 106 IAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLA 165

Query: 197 GFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRD 256
           G GLTKEG++GKV+AKNPFLMGYS+DKRLRPTSEFLKSIGL E++LQAVALKFPDILCRD
Sbjct: 166 GLGLTKEGMLGKVIAKNPFLMGYSIDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRD 225

Query: 257 VDKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVA 316
           VDKVL+PNL YLRRCGFKDGE+VSLVTGYPPILIKSI+HSLEPRIRFLVEIMGRKL EVA
Sbjct: 226 VDKVLRPNLVYLRRCGFKDGEVVSLVTGYPPILIKSIKHSLEPRIRFLVEIMGRKLEEVA 285

Query: 317 EYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           +YPDFFKHG KKRLELR +LL EKKVDFTLSELLECNQKKFMMKMG
Sbjct: 286 KYPDFFKHGFKKRLELRQKLLIEKKVDFTLSELLECNQKKFMMKMG 331

[Close]

BLAST of ClCG02G003170 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.3e-107
Identity = 188/285 (65.96%), Postives = 235/285 (82.46%), Query Frame = 0


Query: 80  ASENWEYLERI-GIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIA 139
           ASENW+YL  I GIQ+RKLP +VS+CPKIL L L E+L+PMVECL++L   P E+ASAI 
Sbjct: 41  ASENWDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAIT 100

Query: 140 KFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGF 199
           KFP ILS+ VEEKLCPLLAFFQALGVPE  LGKMIL NPRLISYSI++KL   V FLA  
Sbjct: 101 KFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASL 160

Query: 200 GLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLK-SIGLNEINLQAVALKFPDILCRDV 259
           GL ++G+IGKVL KNPFLMGYSVDKRLRPT+EFLK S+GL+E  +++V + FP +LCRDV
Sbjct: 161 GLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDV 220

Query: 260 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 319
           +K+LKPN DYL+ CGF D +I ++VTGYP ILIKS+++SL+PRIRFLV++MGR ++EVA 
Sbjct: 221 NKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVAS 280

Query: 320 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YP+FF HGLKK++E R +L+K+  +D +L E+L+CN KKF  K G
Sbjct: 281 YPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of ClCG02G003170 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.0e-27
Identity = 70/316 (22.15%), Postives = 153/316 (48.42%), Query Frame = 0


Query: 85  EYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGIL 144
           +YL ++G+++  LP ++ + P++L   +   L P+V+ L  +  +P ++   + ++P +L
Sbjct: 140 DYLGKLGVRRDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPTDVPRVLERYPELL 199

Query: 145 SYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEG 204
            + +E  +   +A+   +GV  + +G +I   P ++   +   +   V+ L G GL +  
Sbjct: 200 GFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRL- 259

Query: 205 VIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDIL----------- 264
            I +++ K P+++G+ + ++++P  E L  IG+ +  L ++ +++PD+L           
Sbjct: 260 AIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQ 319

Query: 265 -----------CRDVDKVLK--------------PNLDYLRRCGFKDGEIVSLVTGYPPI 324
                        D  +VL+               ++++L  CGF   ++  +V   P +
Sbjct: 320 QSLFESSILVSREDFGRVLERMPQAISLGRAAVLKHVNFLTACGFMLSQVSKMVVACPQL 379

Query: 325 LIKSIQHSLEPRIRFLVEIMGRKLNEVAEYPDFFKHGLKKRLELRHRLLKEKKVDFTLSE 365
           L  +I   +     +    M R L E+ E+P FF +G++  +  RH ++  K +  +L+ 
Sbjct: 380 LALNID-IMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVSRKGLTCSLAW 439

[Close]

BLAST of ClCG02G003170 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.0e-27
Identity = 78/283 (27.56%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 86  YLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILS 145
           YL  +G+   ++ ++  K        L  K+ P+VE L  L    ++I + + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 146 YGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGV 205
             + + L P +AF + LG+ +    K+I   P +++YS   KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 206 IGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDVDKVLKPNL 265
           IG++L + P +M YSV+ +LRPT E+ +S+    +++  +  + P      ++  LKP  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 266 DYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAEYPDFFKHG 325
           ++    GF   EI  +++ Y  +   S++ ++ P+  +  + M    +E+ ++P FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 326 LKKRLELRHRLLKEKKVDFTLSELLECN-------QKKFMMKM 362
           L++R++ R+ L++   V   L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

[Close]

BLAST of ClCG02G003170 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.6e-27
Identity = 71/281 (25.27%), Postives = 143/281 (50.89%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           E      ++  ++G+ +    ++V   PKI+     + +   +  L        E+   +
Sbjct: 314 EEVKSRVDFFLKMGMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLL 373

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           A  P ++   +EE+  PL+ +F  LG+P++ + +++++ P L    +E  +   V FL  
Sbjct: 374 AYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQE 433

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKS-IGLNEINLQAVALKFPDILCRD 257
            G+  E  IG +L K P L+  S+ K++RP   FL +  G+ + ++  V    P +L   
Sbjct: 434 MGIPNE-AIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCS 493

Query: 258 VDKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVA 317
           +   L+PN+ Y    G +  ++  ++  +P +L  ++  +L P+ R+L   M R L ++ 
Sbjct: 494 IGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVD-NLRPKYRYLRRTMIRPLQDLI 553

Query: 318 EYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKF 358
           E+P FF + L++R+  RH ++ E +V+F L  +L C  ++F
Sbjct: 554 EFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of ClCG02G003170 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.6e-26
Identity = 69/316 (21.84%), Postives = 152/316 (48.10%), Query Frame = 0


Query: 85  EYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGIL 144
           +YL ++G+++  LP ++ + P++L   +   L P+V+ L  +  +P+++   + ++P +L
Sbjct: 149 DYLGKLGVRQDALPDLLRRYPQVLHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELL 208

Query: 145 SYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEG 204
            + +E  +   +A+   +GV  + +G +I   P ++   +   +   V+ L G GL +  
Sbjct: 209 GFKLEGTMSTSIAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRL- 268

Query: 205 VIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDIL----------- 264
            I +++ K P+++G+ ++ +++P  E L   G+ +  L  +  ++PDIL           
Sbjct: 269 AIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQ 328

Query: 265 -----------CRDVDKVLK--------------PNLDYLRRCGFKDGEIVSLVTGYPPI 324
                        D  +V++               ++++L  CGF   ++  +V   P +
Sbjct: 329 QSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVNFLTSCGFLLSQVSKMVVACPQL 388

Query: 325 LIKSIQHSLEPRIRFLVEIMGRKLNEVAEYPDFFKHGLKKRLELRHRLLKEKKVDFTLSE 365
           L  ++   ++    +    M R L E+ E+P FF +GL+  +  RH ++ +K    +L+ 
Sbjct: 389 LALNMD-IMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAW 448

[Close]

BLAST of ClCG02G003170 vs. ExPASy TrEMBL
Match: A0A5A7UUK2 (Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold640G00330 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 1.0e-147
Identity = 268/285 (94.04%), Postives = 278/285 (97.54%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AI
Sbjct: 49  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 108

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG
Sbjct: 109 AKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 168

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEGVIGKVLAKNPFLMGYSVDKRLRPT EFLKSIGLN+++LQAVALKFPDILCRDV
Sbjct: 169 VGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDV 228

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+ NLDYLR  GFKDGEIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVAE
Sbjct: 229 DKVLRSNLDYLRSRGFKDGEIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAE 288

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YPDFFKHGLKK+LELRHRLLKEK VDFTLSELLECNQKKFMMKMG
Sbjct: 289 YPDFFKHGLKKKLELRHRLLKEKNVDFTLSELLECNQKKFMMKMG 333

[Close]

BLAST of ClCG02G003170 vs. ExPASy TrEMBL
Match: A0A1S3BQA2 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492550 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 1.0e-147
Identity = 268/285 (94.04%), Postives = 278/285 (97.54%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AI
Sbjct: 42  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 101

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG
Sbjct: 102 AKFPGILSYSVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 161

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEGVIGKVLAKNPFLMGYSVDKRLRPT EFLKSIGLN+++LQAVALKFPDILCRDV
Sbjct: 162 VGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDV 221

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+ NLDYLR  GFKDGEIVS+VTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL+EVAE
Sbjct: 222 DKVLRSNLDYLRSRGFKDGEIVSMVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLDEVAE 281

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YPDFFKHGLKK+LELRHRLLKEK VDFTLSELLECNQKKFMMKMG
Sbjct: 282 YPDFFKHGLKKKLELRHRLLKEKNVDFTLSELLECNQKKFMMKMG 326

[Close]

BLAST of ClCG02G003170 vs. ExPASy TrEMBL
Match: A0A0A0K108 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 4.3e-146
Identity = 267/285 (93.68%), Postives = 275/285 (96.49%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKP+EIA+AI
Sbjct: 42  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPHEIAAAI 101

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEK LGKMILLNPRLISYSIESKLVETVDFLAG
Sbjct: 102 AKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLVETVDFLAG 161

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEGVIGKVLAKNPFLMGYSVDKRLRPT EFLKSIGLN+++LQAVALKFPDILCRDV
Sbjct: 162 VGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTVEFLKSIGLNKMDLQAVALKFPDILCRDV 221

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+ NLDYLR  GFKDGEIVSLVTGYPP+LIKSIQHSLEPRIRFLVEIMGRKL EVAE
Sbjct: 222 DKVLRYNLDYLRSRGFKDGEIVSLVTGYPPVLIKSIQHSLEPRIRFLVEIMGRKLEEVAE 281

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YPDFFKHGLKK+LELRHRLLKEK VDF LSELLECNQKKFMMKMG
Sbjct: 282 YPDFFKHGLKKKLELRHRLLKEKNVDFALSELLECNQKKFMMKMG 326

[Close]

BLAST of ClCG02G003170 vs. ExPASy TrEMBL
Match: A0A6J1C2G0 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007658 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 8.1e-145
Identity = 261/286 (91.26%), Postives = 274/286 (95.80%), Query Frame = 0


Query: 77  KERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASA 136
           KERASENWEYLERIGIQKRKLP VVSKCPKILALGL EKLVPMVECL TLSTKP+EIASA
Sbjct: 46  KERASENWEYLERIGIQKRKLPFVVSKCPKILALGLHEKLVPMVECLGTLSTKPHEIASA 105

Query: 137 IAKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLA 196
           IAKFPGILSY VEEKLCPLLAFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLA
Sbjct: 106 IAKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLA 165

Query: 197 GFGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRD 256
           G GLTKEG++GKV+AKNPFLMGYS+DKRLRPTSEFLKSIGL E++LQAVALKFPDILCRD
Sbjct: 166 GLGLTKEGMLGKVIAKNPFLMGYSIDKRLRPTSEFLKSIGLKEMDLQAVALKFPDILCRD 225

Query: 257 VDKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVA 316
           VDKVL+PNL YLRRCGFKDGE+VSLVTGYPPILIKSI+HSLEPRIRFLVEIMGRKL EVA
Sbjct: 226 VDKVLRPNLVYLRRCGFKDGEVVSLVTGYPPILIKSIKHSLEPRIRFLVEIMGRKLEEVA 285

Query: 317 EYPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           +YPDFFKHG KKRLELR +LL EKKVDFTLSELLECNQKKFMMKMG
Sbjct: 286 KYPDFFKHGFKKRLELRQKLLIEKKVDFTLSELLECNQKKFMMKMG 331

[Close]

BLAST of ClCG02G003170 vs. ExPASy TrEMBL
Match: A0A6J1I081 (transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468249 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.4e-141
Identity = 257/284 (90.49%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 78  ERASENWEYLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAI 137
           ERA+ENWEYLE IGIQKRKLPSVVSKCPKIL LGLQEK+ PMVECLATL+TKP EIA+AI
Sbjct: 42  ERAAENWEYLEGIGIQKRKLPSVVSKCPKILVLGLQEKIAPMVECLATLTTKPREIATAI 101

Query: 138 AKFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAG 197
           AKFPGILSY VEEKLCPLLAFFQALGVPEK LGKMILLNPRLISYSIESKL+ETVDFLAG
Sbjct: 102 AKFPGILSYSVEEKLCPLLAFFQALGVPEKQLGKMILLNPRLISYSIESKLIETVDFLAG 161

Query: 198 FGLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDV 257
            GLTKEG+IGKVL KNPFL+GYSV KRLRPT EFLKSIGL+E++LQAVALKFPDILCRDV
Sbjct: 162 VGLTKEGMIGKVLVKNPFLIGYSVHKRLRPTFEFLKSIGLSEMDLQAVALKFPDILCRDV 221

Query: 258 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 317
           DKVL+PNLDYLRR GFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGR L+EVAE
Sbjct: 222 DKVLRPNLDYLRRRGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRTLDEVAE 281

Query: 318 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKM 362
           YP+FFKHGLKKRLELRHRLLKEK +DFTLSELLECNQKKFMMKM
Sbjct: 282 YPEFFKHGLKKRLELRHRLLKEKTMDFTLSELLECNQKKFMMKM 325

[Close]

BLAST of ClCG02G003170 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-109
Identity = 188/285 (65.96%), Postives = 235/285 (82.46%), Query Frame = 0


Query: 80  ASENWEYLERI-GIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIA 139
           ASENW+YL  I GIQ+RKLP +VS+CPKIL L L E+L+PMVECL++L   P E+ASAI 
Sbjct: 41  ASENWDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAIT 100

Query: 140 KFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGF 199
           KFP ILS+ VEEKLCPLLAFFQALGVPE  LGKMIL NPRLISYSI++KL   V FLA  
Sbjct: 101 KFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASL 160

Query: 200 GLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLK-SIGLNEINLQAVALKFPDILCRDV 259
           GL ++G+IGKVL KNPFLMGYSVDKRLRPT+EFLK S+GL+E  +++V + FP +LCRDV
Sbjct: 161 GLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDV 220

Query: 260 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 319
           +K+LKPN DYL+ CGF D +I ++VTGYP ILIKS+++SL+PRIRFLV++MGR ++EVA 
Sbjct: 221 NKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVAS 280

Query: 320 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YP+FF HGLKK++E R +L+K+  +D +L E+L+CN KKF  K G
Sbjct: 281 YPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of ClCG02G003170 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-109
Identity = 188/285 (65.96%), Postives = 235/285 (82.46%), Query Frame = 0


Query: 80  ASENWEYLERI-GIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIA 139
           ASENW+YL  I GIQ+RKLP +VS+CPKIL L L E+L+PMVECL++L   P E+ASAI 
Sbjct: 41  ASENWDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAIT 100

Query: 140 KFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGF 199
           KFP ILS+ VEEKLCPLLAFFQALGVPE  LGKMIL NPRLISYSI++KL   V FLA  
Sbjct: 101 KFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASL 160

Query: 200 GLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLK-SIGLNEINLQAVALKFPDILCRDV 259
           GL ++G+IGKVL KNPFLMGYSVDKRLRPT+EFLK S+GL+E  +++V + FP +LCRDV
Sbjct: 161 GLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDV 220

Query: 260 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 319
           +K+LKPN DYL+ CGF D +I ++VTGYP ILIKS+++SL+PRIRFLV++MGR ++EVA 
Sbjct: 221 NKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVAS 280

Query: 320 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YP+FF HGLKK++E R +L+K+  +D +L E+L+CN KKF  K G
Sbjct: 281 YPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of ClCG02G003170 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 391.3 bits (1004), Expect = 9.2e-109
Identity = 188/285 (65.96%), Postives = 235/285 (82.46%), Query Frame = 0


Query: 80  ASENWEYLERI-GIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIA 139
           ASENW+YL  I GIQ+RKLP +VS+CPKIL L L E+L+PMVECL++L   P E+ASAI 
Sbjct: 41  ASENWDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAIT 100

Query: 140 KFPGILSYGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGF 199
           KFP ILS+ VEEKLCPLLAFFQALGVPE  LGKMIL NPRLISYSI++KL   V FLA  
Sbjct: 101 KFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASL 160

Query: 200 GLTKEGVIGKVLAKNPFLMGYSVDKRLRPTSEFLK-SIGLNEINLQAVALKFPDILCRDV 259
           GL ++G+IGKVL KNPFLMGYSVDKRLRPT+EFLK S+GL+E  +++V + FP +LCRDV
Sbjct: 161 GLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDV 220

Query: 260 DKVLKPNLDYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAE 319
           +K+LKPN DYL+ CGF D +I ++VTGYP ILIKS+++SL+PRIRFLV++MGR ++EVA 
Sbjct: 221 NKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVAS 280

Query: 320 YPDFFKHGLKKRLELRHRLLKEKKVDFTLSELLECNQKKFMMKMG 363
           YP+FF HGLKK++E R +L+K+  +D +L E+L+CN KKF  K G
Sbjct: 281 YPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKFG 325

[Close]

BLAST of ClCG02G003170 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 136.7 bits (343), Expect = 4.1e-32
Identity = 82/271 (30.26%), Postives = 143/271 (52.77%), Query Frame = 0


Query: 87  LERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILSY 146
           +E++ +  +    ++ K P IL+  +QE    +     + S    +I  AI ++P +L  
Sbjct: 307 MEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDIDHAIRRWPLLLGC 366

Query: 147 GVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGVI 206
                +  ++  F  LGV +K +GK+I   P+L+      + ++ V FL   G  KE ++
Sbjct: 367 SA-SNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCK-PQEFLKVVCFLEDLGFQKE-IV 426

Query: 207 GKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDVDKVLKPNLD 266
           G++L + P + G S++K L+    FL   G++  +   +  K+P+ L  D DK + P L 
Sbjct: 427 GQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLK 486

Query: 267 YLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAEYPDFFKHGL 326
           YL   G  + EI  ++  + PIL  SI   L P+  FLV  M + + EV EYP +F + L
Sbjct: 487 YLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSL 546

Query: 327 KKRLELRHRLLKEKKVDFTLSELLECNQKKF 358
           +KR++ R R+LK + ++ TL E+L  N ++F
Sbjct: 547 EKRIKPRFRVLKGRNIECTLQEMLGKNDEEF 574

[Close]

BLAST of ClCG02G003170 vs. TAIR 10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 3.6e-28
Identity = 78/283 (27.56%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 86  YLERIGIQKRKLPSVVSKCPKILALGLQEKLVPMVECLATLSTKPNEIASAIAKFPGILS 145
           YL  +G+   ++ ++  K        L  K+ P+VE L  L    ++I + + K P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 146 YGVEEKLCPLLAFFQALGVPEKHLGKMILLNPRLISYSIESKLVETVDFLAGFGLTKEGV 205
             + + L P +AF + LG+ +    K+I   P +++YS   KL  TV+FL+  GLT+E  
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEE-Q 321

Query: 206 IGKVLAKNPFLMGYSVDKRLRPTSEFLKSIGLNEINLQAVALKFPDILCRDVDKVLKPNL 265
           IG++L + P +M YSV+ +LRPT E+ +S+    +++  +  + P      ++  LKP  
Sbjct: 322 IGRILTRCPNIMSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVT 381

Query: 266 DYLRRCGFKDGEIVSLVTGYPPILIKSIQHSLEPRIRFLVEIMGRKLNEVAEYPDFFKHG 325
           ++    GF   EI  +++ Y  +   S++ ++ P+  +  + M    +E+ ++P FF + 
Sbjct: 382 EFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYS 441

Query: 326 LKKRLELRHRLLKEKKVDFTLSELLECN-------QKKFMMKM 362
           L++R++ R+ L++   V   L+++L  +        KK MMK+
Sbjct: 442 LQERIKPRYELVQRSGVRLLLNQVLSLSGIEFEKVVKKKMMKL 478

The following BLAST results are available for this feature:

BLAST of ClCG02G003170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887558.1	3.7e-152	95.45	transcription termination factor MTERF6, chloroplastic/mitochondrial [Benincasa ...	[more]
XP_008451174.1	2.1e-147	94.04	PREDICTED: transcription termination factor MTERF6, chloroplastic/mitochondrial ...	[more]
KAA0059582.1	2.1e-147	94.04	transcription termination factor MTERF6 [Cucumis melo var. makuwa] >TYK25788.1 t...	[more]
XP_004144567.1	8.8e-146	93.68	transcription termination factor MTERF6, chloroplastic/mitochondrial [Cucumis sa...	[more]
XP_022135779.1	1.7e-144	91.26	transcription termination factor MTERF6, chloroplastic/mitochondrial [Momordica ...	[more]

BLAST of ClCG02G003170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL6	1.3e-107	65.96	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
B6TGN4	3.0e-27	22.15	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4JVI3	5.0e-27	27.56	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	6.6e-27	25.27	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	5.6e-26	21.84	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]

BLAST of ClCG02G003170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUK2	1.0e-147	94.04	Transcription termination factor MTERF6 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BQA2	1.0e-147	94.04	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucumis ...	[more]
A0A0A0K108	4.3e-146	93.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029940 PE=3 SV=1	[more]
A0A6J1C2G0	8.1e-145	91.26	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Momordic...	[more]
A0A6J1I081	1.4e-141	90.49	transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Cucurbit...	[more]

BLAST of ClCG02G003170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38160.1	9.2e-109	65.96	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.2	9.2e-109	65.96	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.3	9.2e-109	65.96	Mitochondrial transcription termination factor family protein	[more]
AT1G78930.1	4.1e-32	30.26	Mitochondrial transcription termination factor family protein	[more]
AT4G14605.1	3.6e-28	27.56	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 243..274 e-value: 0.0025 score: 27.1 coord: 134..165 e-value: 0.0026 score: 27.0 coord: 207..238 e-value: 1.5E-5 score: 34.4 coord: 170..201 e-value: 1.6E-4 score: 31.0 coord: 98..129 e-value: 19.0 score: 14.1 coord: 312..343 e-value: 16.0 score: 14.4 coord: 279..311 e-value: 0.21 score: 20.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 79..357 e-value: 1.2E-53 score: 182.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 75..362
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 150..364 e-value: 1.2E-49 score: 170.9 coord: 65..149 e-value: 4.6E-10 score: 41.0
None	No IPR available	PANTHER	PTHR13068:SF5	TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 75..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G003170.2	ClCG02G003170.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding