ClCG02G002480 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCATCGTCGTCGTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCAGTGAGTTTCATTTCCACACCTTTATATTAGATGATACATTGCAATTCTTTAATTTTACACTCATTTAATTACTGTTATACATACGTTGATTCTTTTGATAACATAGTGAAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATAATGTATGCCTCAACCGTTGCGCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGGTGCTGTATTGATGAAGAGCCCCAAGCTATGCCCAGCAACTAAAGTACATGTTGTTGCTTCAAATAAAGGGCTTTAATTTCTGTAGTTGATGCTTTGCTACAGTTTGAATGTTTTTAAGTTGATAAATGCATATGTTTTGAGATTAATTAGTATAAGTTAATCTCAGTACCATGACAAGTACATTTCTCCAATGGCTTTTGTGTCAATTGGTTATGTCATTAATCTATCAAAATCTCCTTACAAGTACTATTTTGTTTGTTTGATTGGAGCTACCCAGTTAAATCTATGTTGATTGAATAAAACAATGTTTTTGGAGTGATCAATGCAACAATTTTCACTTTTTCCAACGTCGGAAAAAGTACTAAAAATGTCGAGAAAAGTTATGTCGACGCATTTTTCTGCATTAGCATAACCGTTGACGTATCCAAATCGGGAGAAGTACTTCTCGACGAAAAAAATATTTTTATTGATAAAAGTATACTTTTGTCGATACAATATTGCATTGGCAAATAAACTTACAACGTGCCGCTGCCAGCGTTGTTGGAGAGTGCGGCTGCTGCATCGGAGGAGCGTGCAGCCGCAGGACCTCCAAGATTGCAAAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGTGAGGAAAAGTGGAGTGAGAAAGGAAAATGTGAGGAAAAGAAAAGTTGGGTAAAATTAAAGAAAATTTGATATATAAAAAAATTTTGATTTTTTTATAAAATTTTTGCAATGATTTTATAAAATTTGATAACAAGTAAAAATTCTTGTAGGGTGATCTTGAAATTTAGAAAAGTGATTTTGACCATATAAATCTAAATTGATTTGAAAGTAGTTAGTTGACAACTGAAAAGCATGTCTATTTTTGTAAAAAAAAAATAAAAAAAAAATTACAGATACATGAATTTACTTGTTTGATTGGACAAATATCAATGGAGCACACGCATGTGGAGTGAAGTTTTCGTACCACTCTAAATACATTTTAGTTTTTACAAATGTCCATAAAATTATGGTATATATATAAATACATATTGATGTAGCATCTAAATTAAGTAATATTAATTATAAAATTACACTAAACATTTATATAATTTCTTTGAGAAAAACGTTTATCACATTAACCAACCTAAAATATATAAGGAAATAATGAAATTTGAAATATTTATTAAAGCTTCTTAAACTAAAACACAACAAAAATCATTAATTTTCTTTTTAAAAAATTAATAAGGATCAGAAAATTATTTATGTATTTAAATGTGTATTTATATGAGAGAAAAATTAAAAATAGAATTAATGTTTTAAATTTATTTTAAGTGAAAAAAAAACAATATTGATATATGAAATGAAAAAATAAAAAATAAAAAAAAATAAAAAAAAAAACGGAACAAGTATATGTACGTATATACAAAAATTCAATTGAGCGTCTCCCTTGCCCGTGCATCCATCGGCTCCGAACTTTGAATGTTGTTAGGATCAAAACATTGTCAAATTTTGCTTGATGGATGAGGAGATCTCATACTCTTTATAAGAGGCATGGTTTTTATTGTCAATTAGCTTTGAAATGGAATTGTAATATGATATCTAAGTCCCTTAAAAAAAAACCCTAATAAGAACCATATAAACAATATGCTTGCATGTCTCAAATGTCAAGTTTGTTAATATTGTCTAAAATATATAACTTCACATTTTGTATGGTCGAGTCACTTGACGCTTTAATTAATGTCAGACATGTTGATTACAAGAATAACATAGTAGAAGAAACTATGATGAAAACGGGAGCGGAGTTGATGATGTCAATTGTCAAGCGTTGCAGTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCATCGTCGTCGTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATGAAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATAATGTATGCCTCAACCGTTGCGCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGCTGCTGCATCGGAGGAGCGTGCAGCCGCAGGACCTCCAAGATTGCAAAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGTGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCATCGTCGTCGTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATGAAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATAATGTATGCCTCAACCGTTGCGCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGCTGCTGCATCGGAGGAGCGTGCAGCCGCAGGACCTCCAAGATTGCAAAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGTGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCACCACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA MSSKAFIFLGLLFVIVVVLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANNVCLNRCAHGCCSCVRGRCISVVGECGCCIGGACSRRTSKIAKKNLIGGEVEEKMSEEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN Homology
BLAST of ClCG02G002480 vs. NCBI nr
Match: XP_038888333.1 (glycine-rich protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 109.8 bits (273), Expect = 2.3e-20 Identity = 77/167 (46.11%), Postives = 85/167 (50.90%), Query Frame = 0
BLAST of ClCG02G002480 vs. NCBI nr
Match: XP_038888334.1 (glycine-rich protein-like isoform X2 [Benincasa hispida]) HSP 1 Score: 109.0 bits (271), Expect = 4.0e-20 Identity = 77/167 (46.11%), Postives = 84/167 (50.30%), Query Frame = 0
BLAST of ClCG02G002480 vs. NCBI nr
Match: XP_004144531.1 (glycine-rich protein [Cucumis sativus] >KGN43452.1 hypothetical protein Csa_020301 [Cucumis sativus]) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-12 Identity = 53/97 (54.64%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of ClCG02G002480 vs. NCBI nr
Match: XP_038888674.1 (glycine-rich protein-like [Benincasa hispida]) HSP 1 Score: 68.6 bits (166), Expect = 6.0e-08 Identity = 61/163 (37.42%), Postives = 69/163 (42.33%), Query Frame = 0
BLAST of ClCG02G002480 vs. NCBI nr
Match: KAE8645721.1 (hypothetical protein Csa_020383 [Cucumis sativus]) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-06 Identity = 42/92 (45.65%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of ClCG02G002480 vs. ExPASy TrEMBL
Match: A0A0A0K5A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037560 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 8.7e-13 Identity = 53/97 (54.64%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of ClCG02G002480 vs. ExPASy TrEMBL
Match: A0A6J1C3T3 (glycine-rich protein 3 short isoform-like OS=Momordica charantia OX=3673 GN=LOC111007996 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.8e-05 Identity = 60/168 (35.71%), Postives = 76/168 (45.24%), Query Frame = 0
BLAST of ClCG02G002480 vs. ExPASy TrEMBL
Match: A0A6J1JMI7 (glycine-rich protein DC7.1-like OS=Cucurbita maxima OX=3661 GN=LOC111486537 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.0e-05 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of ClCG02G002480 vs. ExPASy TrEMBL
Match: A0A6J1ESD5 (glycine-rich protein DC7.1-like OS=Cucurbita moschata OX=3662 GN=LOC111437131 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 0
BLAST of ClCG02G002480 vs. ExPASy TrEMBL
Match: A0A6J1C3E0 (glycine-rich protein DC7.1-like OS=Momordica charantia OX=3673 GN=LOC111007997 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 5.7e-04 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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