ClCG02G002460 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G002460
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	glycine-rich protein-like
Location	CG_Chr02: 2497379 .. 2498439 (+)
RNA-Seq Expression	ClCG02G002460
Synteny	ClCG02G002460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTTCTCATCTCAAAATACTTCTCAATTATCAGTTCATCAACACCCAACTAAATTATGGGTCAGTCTTTAATTGCCATTGTCTCATTTCATATCTCTCTTGCTCTTTATGCACCTATAAATACATCTACGAGAATGCAAAATTTTCTCATCCCATCTCCAAAAATCAATCTCTTACTTAAACAAAAAAAAATGAGTTCCAAAGCTTTTGTTTTCCTCGGTCTTCTTCTCGCCTTTGTTCTCCTCCTCTCTTCGGAGGTGGCCGCGAGAGACCTCGCAGAGACTTCCTCCAAGAAGGATAACGGTGAGTTCGATATAATAAGAACTCTTAACTCCTTTAAAAAGTGTAAAACCTATACTTATTATTCAACTTCTTTTTTATATATACACAAAACTTTTGGAGTCCTACCATCTTGTTATCGACATTTCCATAAAATTAAGATGGGTTGATTTTAATGATGACATTGCAGAGGCTACTGTGGAGACCAATGGTGTAGAGGATGCCAAGTATGGAGGGTACGATAGAGGCTATGGTGGTCGTGATCGTTACGGCCATGGTGGCTATGGCGGTCGTGGTGGCTACGGAGGCCGTGGTGGCTACGGAGGCCGTGGTGGTTACGGTGACCGTGGTGGCTACGGAGGAGGTTGCCGGTATGGTCGATGCGGGTACAGGTGCTGCAGCTACGCTGGTGAAGTGGTAGAGGGCGCAAAACCCTAAGAAAACGTGTGGAATGGGCTGAAATAATAAAATAGTTTAAAGTTAAATGTTTGAACTGTGAAGCTTAAGAAATAAATGCATGGGGGAATGGAGTGGCTAGCTTCTAGTTTTTCTTTTTCCCTATGTTTGGTTTTAGTATGTTGCTACAGATTTGCTTTTGCAAATTTTGATATTTTCACTTTTGTGTGGAATCCTACTTCCTATCTCCATAATTTGAGTATAGTCTAGTACTTAATGTATATGCACTTTTTTTCGAAATTTGAAATTTCATCTCTATTAATCATCTTTAGTTGAAAATTCACTATTGTCACTAATATAATACTAATAATAATTTGGTTGTTT

mRNA sequence

TTTCCTTCTCATCTCAAAATACTTCTCAATTATCAGTTCATCAACACCCAACTAAATTATGGGTCAGTCTTTAATTGCCATTGTCTCATTTCATATCTCTCTTGCTCTTTATGCACCTATAAATACATCTACGAGAATGCAAAATTTTCTCATCCCATCTCCAAAAATCAATCTCTTACTTAAACAAAAAAAAATGAGTTCCAAAGCTTTTGTTTTCCTCGGTCTTCTTCTCGCCTTTGTTCTCCTCCTCTCTTCGGAGGTGGCCGCGAGAGACCTCGCAGAGACTTCCTCCAAGAAGGATAACGAGGCTACTGTGGAGACCAATGGTGTAGAGGATGCCAAGTATGGAGGGTACGATAGAGGCTATGGTGGTCGTGATCGTTACGGCCATGGTGGCTATGGCGGTCGTGGTGGCTACGGAGGCCGTGGTGGCTACGGAGGCCGTGGTGGTTACGGTGACCGTGGTGGCTACGGAGGAGGTTGCCGGTATGGTCGATGCGGGTACAGGTGCTGCAGCTACGCTGGTGAAGTGGTAGAGGGCGCAAAACCCTAAGAAAACGTGTGGAATGGGCTGAAATAATAAAATAGTTTAAAGTTAAATGTTTGAACTGTGAAGCTTAAGAAATAAATGCATGGGGGAATGGAGTGGCTAGCTTCTAGTTTTTCTTTTTCCCTATGTTTGGTTTTAGTATGTTGCTACAGATTTGCTTTTGCAAATTTTGATATTTTCACTTTTGTGTGGAATCCTACTTCCTATCTCCATAATTTGAGTATAGTCTAGTACTTAATGTATATGCACTTTTTTTCGAAATTTGAAATTTCATCTCTATTAATCATCTTTAGTTGAAAATTCACTATTGTCACTAATATAATACTAATAATAATTTGGTTGTTT

Coding sequence (CDS)

ATGGGTCAGTCTTTAATTGCCATTGTCTCATTTCATATCTCTCTTGCTCTTTATGCACCTATAAATACATCTACGAGAATGCAAAATTTTCTCATCCCATCTCCAAAAATCAATCTCTTACTTAAACAAAAAAAAATGAGTTCCAAAGCTTTTGTTTTCCTCGGTCTTCTTCTCGCCTTTGTTCTCCTCCTCTCTTCGGAGGTGGCCGCGAGAGACCTCGCAGAGACTTCCTCCAAGAAGGATAACGAGGCTACTGTGGAGACCAATGGTGTAGAGGATGCCAAGTATGGAGGGTACGATAGAGGCTATGGTGGTCGTGATCGTTACGGCCATGGTGGCTATGGCGGTCGTGGTGGCTACGGAGGCCGTGGTGGCTACGGAGGCCGTGGTGGTTACGGTGACCGTGGTGGCTACGGAGGAGGTTGCCGGTATGGTCGATGCGGGTACAGGTGCTGCAGCTACGCTGGTGAAGTGGTAGAGGGCGCAAAACCCTAA

Protein sequence

MGQSLIAIVSFHISLALYAPINTSTRMQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKYGGYDRGYGGRDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYGRCGYRCCSYAGEVVEGAKP

Homology

[Close]

BLAST of ClCG02G002460 vs. NCBI nr
Match: XP_022952570.1 (cold and drought-regulated protein CORA-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-47
Identity = 115/138 (83.33%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ  LIPS K +L L   KMSSKAF+FLGLL A VLL+SSEVAARDLAETS+KK+NEAT 
Sbjct: 1   MQILLIPSSKFSLFL-NTKMSSKAFIFLGLLFALVLLISSEVAARDLAETSTKKENEATA 60

Query: 87  ETNGVEDAKYGGYDRGYGGRDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYGR 146
           ETNGVEDAKYGGYD GYGGR  YG GGYGGRGGYGGRGGYGGRGGYG  GGYG GCRYGR
Sbjct: 61  ETNGVEDAKYGGYDGGYGGRGGYGRGGYGGRGGYGGRGGYGGRGGYGGGGGYGRGCRYGR 120

Query: 147 CGYRCCSYAGEVVEGAKP 165
           CGYRCCSYAGEVVEGAKP
Sbjct: 121 CGYRCCSYAGEVVEGAKP 137

[Close]

BLAST of ClCG02G002460 vs. NCBI nr
Match: XP_022969295.1 (glycine-rich protein-like [Cucurbita maxima])

HSP 1 Score: 198.0 bits (502), Expect = 6.4e-47
Identity = 115/139 (82.73%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ  LIPS K +L+L   KMSSKAF+FLGLL AF+LL+SSEVAARDLAETS+ K+ EATV
Sbjct: 1   MQILLIPSSKFSLIL-NTKMSSKAFIFLGLLFAFILLISSEVAARDLAETSANKEKEATV 60

Query: 87  ETNGVEDAKYGGYDRGYGGRDRY-GHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYG 146
           ETNGVEDAKYGGYD GYGGR  Y G GGYGGRGGYGGRGGYGGRGGYG RGGYG GCRYG
Sbjct: 61  ETNGVEDAKYGGYDGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGRGCRYG 120

Query: 147 RCGYRCCSYAGEVVEGAKP 165
           RCGYRCCSYAGEVVEGAKP
Sbjct: 121 RCGYRCCSYAGEVVEGAKP 138

[Close]

BLAST of ClCG02G002460 vs. NCBI nr
Match: XP_023554637.1 (cold and drought-regulated protein CORA-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45
Identity = 113/139 (81.29%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ  LIPS K +L L   KMSSKAF+FLG L A +L++SSEVAARDLAETS+KK+NEATV
Sbjct: 1   MQILLIPSSKFSLFL-NTKMSSKAFIFLGFLFALILVISSEVAARDLAETSAKKENEATV 60

Query: 87  ETNGVEDAKYGGYDRGYGGRDRY-GHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYG 146
           ETNGVEDAKYGGYD GYGGR  Y G GGYGGRGGYGGRGGYGGRGGYG  GGYG GCRYG
Sbjct: 61  ETNGVEDAKYGGYDGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGGGGGYGRGCRYG 120

Query: 147 RCGYRCCSYAGEVVEGAKP 165
           RCGYRCCSYAGEVVEGAKP
Sbjct: 121 RCGYRCCSYAGEVVEGAKP 138

[Close]

BLAST of ClCG02G002460 vs. NCBI nr
Match: KAG6572253.1 (Glycine-rich protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.7 bits (478), Expect = 3.9e-44
Identity = 107/125 (85.60%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKYGGYDRGYGG 105
           MSSKAF+FLGLL A VLL+SSEVAARDLAETS+KK+NEAT ETNGVEDAKYGGYD GYGG
Sbjct: 1   MSSKAFIFLGLLFALVLLISSEVAARDLAETSTKKENEATAETNGVEDAKYGGYDGGYGG 60

Query: 106 RDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGG------GCRYGRCGYRCCSYAGEVV 165
           R  YG GGYGGRGGYGGRGGYGGRGGYG RGGYGG      GCRYGRCGYRCCSYAGEVV
Sbjct: 61  RGGYGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGGGGGYGRGCRYGRCGYRCCSYAGEVV 120

[Close]

BLAST of ClCG02G002460 vs. NCBI nr
Match: KAG7011884.1 (Glycine-rich protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.7 bits (470), Expect = 3.3e-43
Identity = 106/124 (85.48%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKYGGYDRGYGG 105
           MSSKAF+FLGLL A VLL+SSEVAARDLAETS+KK+NEAT ETNGVEDAKYGGYD GYGG
Sbjct: 1   MSSKAFIFLGLLFALVLLISSEVAARDLAETSTKKENEATAETNGVEDAKYGGYDGGYGG 60

Query: 106 RDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGG------GCRYGRCGYRCCSYAGEVV 164
           R  YG GGYGGRGGYGGRGGYGGRGGYG RGGYGG      GCRYGRCGYRCCSYAGEVV
Sbjct: 61  RGGYGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGGGGGYGRGCRYGRCGYRCCSYAGEVV 120

[Close]

BLAST of ClCG02G002460 vs. ExPASy Swiss-Prot
Match: P23137 (Glycine-rich protein OS=Nicotiana tabacum OX=4097 GN=GRP PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.0e-07
Identity = 59/123 (47.97%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSS--KKDNEATVETNGVEDAKYGGYDRGY 105
           M SKAF+FLGL LAF  L+SSEV A +LAETS+  K D E  V+ +G             
Sbjct: 1   MGSKAFLFLGLCLAFFFLISSEVVAGELAETSNPMKLDGENGVDVDG------------- 60

Query: 106 GGRDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYGRC--GY----RCCSYAGE 161
               R G+   GG G YGG  G GG GGY  R     GCRYG C  GY    RCCSYAGE
Sbjct: 61  ----RGGYNDVGGDGYYGGGRGRGG-GGYKRR-----GCRYGCCRKGYNGCKRCCSYAGE 100

[Close]

BLAST of ClCG02G002460 vs. ExPASy Swiss-Prot
Match: P11898 (Glycine-rich protein HC1 OS=Oxybasis rubra OX=3560 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.9e-05
Identity = 58/128 (45.31%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKD---NEATVETNGVEDAKYGGYDRG 105
           M SK F+ LGL +AF +L+SSEVAAR+LAET++K +   N       G      GGY  G
Sbjct: 1   MGSKIFLLLGLSIAFAILISSEVAARELAETAAKTEGYNNGGGYHNGGGGYNNGGGYHNG 60

Query: 106 YGGRD-----RYGHGGYGGRGGY-GGRGGY-------GGRGGYGDRGGY--GGGCRYGRC 156
            GG +       G GGY   GGY  G GGY        G GGY + GGY  GGG  Y  C
Sbjct: 61  GGGYNNGGGYHNGGGGYNNGGGYHNGGGGYNNGGGHHNGGGGYNNGGGYHGGGGSCYHYC 120

[Close]

BLAST of ClCG02G002460 vs. ExPASy Swiss-Prot
Match: P37703 (Glycine-rich protein DC9.1 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 57/128 (44.53%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKD---NEATVETNGVEDAKYGGYDRG 105
           M SK F+ LGL +AF +L+SSEVAAR+LAET++K +   N       G      GGY  G
Sbjct: 1   MGSKIFLLLGLSIAFAILISSEVAARELAETAAKTEGYNNGGGYHNGGGGYNNGGGYHNG 60

Query: 106 YGGRD-----RYGHGGYGGRGGY-GGRGGY-------GGRGGYGDRGGY--GGGCRYGRC 156
            GG +       G GGY   GGY  G GGY        G GGY + GG+  GGG  Y  C
Sbjct: 61  GGGYNNGGGYHNGGGGYNNGGGYHNGGGGYNNGGGHHNGGGGYNNGGGHHGGGGSCYHYC 120

[Close]

BLAST of ClCG02G002460 vs. ExPASy Swiss-Prot
Match: O22612 (Dormancy-associated protein 2 OS=Pisum sativum OX=3888 GN=DRM2 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-04
Identity = 57/111 (51.35%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 47  SSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKYGGYDRG---- 106
           S KA + LG LLA VLL+SSEV+AR+L E   +K +E       V DAKYGGY RG    
Sbjct: 3   SRKAMLILG-LLAMVLLISSEVSARELTEEVVEKSDE-------VNDAKYGGYGRGGGYH 62

Query: 107 YGGRDRYGHGGYGGRGGY-GGRGGYGGRGGYGDRGG---YGGGCRYGRCGY 150
            GG    G GGY G GGY  G GGY G GGY + GG    GGG   G  GY
Sbjct: 63  NGGGYHNGGGGYNGGGGYHNGGGGYNGGGGYHNGGGGYHNGGGGYNGGGGY 105

[Close]

BLAST of ClCG02G002460 vs. ExPASy TrEMBL
Match: A0A6J1GM55 (cold and drought-regulated protein CORA-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455223 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.2e-48
Identity = 115/138 (83.33%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ  LIPS K +L L   KMSSKAF+FLGLL A VLL+SSEVAARDLAETS+KK+NEAT 
Sbjct: 1   MQILLIPSSKFSLFL-NTKMSSKAFIFLGLLFALVLLISSEVAARDLAETSTKKENEATA 60

Query: 87  ETNGVEDAKYGGYDRGYGGRDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYGR 146
           ETNGVEDAKYGGYD GYGGR  YG GGYGGRGGYGGRGGYGGRGGYG  GGYG GCRYGR
Sbjct: 61  ETNGVEDAKYGGYDGGYGGRGGYGRGGYGGRGGYGGRGGYGGRGGYGGGGGYGRGCRYGR 120

Query: 147 CGYRCCSYAGEVVEGAKP 165
           CGYRCCSYAGEVVEGAKP
Sbjct: 121 CGYRCCSYAGEVVEGAKP 137

[Close]

BLAST of ClCG02G002460 vs. ExPASy TrEMBL
Match: A0A6J1HZJ5 (glycine-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468344 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.1e-47
Identity = 115/139 (82.73%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ  LIPS K +L+L   KMSSKAF+FLGLL AF+LL+SSEVAARDLAETS+ K+ EATV
Sbjct: 1   MQILLIPSSKFSLIL-NTKMSSKAFIFLGLLFAFILLISSEVAARDLAETSANKEKEATV 60

Query: 87  ETNGVEDAKYGGYDRGYGGRDRY-GHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYG 146
           ETNGVEDAKYGGYD GYGGR  Y G GGYGGRGGYGGRGGYGGRGGYG RGGYG GCRYG
Sbjct: 61  ETNGVEDAKYGGYDGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGGRGGYGRGCRYG 120

Query: 147 RCGYRCCSYAGEVVEGAKP 165
           RCGYRCCSYAGEVVEGAKP
Sbjct: 121 RCGYRCCSYAGEVVEGAKP 138

[Close]

BLAST of ClCG02G002460 vs. ExPASy TrEMBL
Match: A0A6J1GKL6 (glycine-rich protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455223 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.0e-42
Identity = 108/138 (78.26%), Postives = 113/138 (81.88%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ  LIPS K +L L   KMSSKAF+FLGLL A VLL+SSEVAARDLAETS+KK+NEAT 
Sbjct: 1   MQILLIPSSKFSLFL-NTKMSSKAFIFLGLLFALVLLISSEVAARDLAETSTKKENEATA 60

Query: 87  ETNGVEDAKYGGYDRGYGGRDRYGHGGYGGRGGYGGRGGYGGRGGYGDRGGYGGGCRYGR 146
           ETNGVEDAKYGGYD           GGYGGRGGYGGRGGYGGRGGYG  GGYG GCRYGR
Sbjct: 61  ETNGVEDAKYGGYD-----------GGYGGRGGYGGRGGYGGRGGYGGGGGYGRGCRYGR 120

Query: 147 CGYRCCSYAGEVVEGAKP 165
           CGYRCCSYAGEVVEGAKP
Sbjct: 121 CGYRCCSYAGEVVEGAKP 126

[Close]

BLAST of ClCG02G002460 vs. ExPASy TrEMBL
Match: A0A5D3DE59 (Cold and drought-regulated protein CORA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00050 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.8e-40
Identity = 110/121 (90.91%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKY-GGYDRGYG 105
           MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSK DNEATVETNGVEDAKY GGYDRGYG
Sbjct: 1   MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKTDNEATVETNGVEDAKYGGGYDRGYG 60

Query: 106 GRDRYGHGGYGGRGGYGGRGGYGGRGGY-GDRGGYGGGCRYGRCGYRCCSYAGEVVEGAK 165
           G   YG GGY GRGGY GRGGYGGRGGY G RGGYG GCRYGRCGYRCCSYAGEVVEGAK
Sbjct: 61  G-GGYGRGGY-GRGGY-GRGGYGGRGGYGGGRGGYGRGCRYGRCGYRCCSYAGEVVEGAK 118

[Close]

BLAST of ClCG02G002460 vs. ExPASy TrEMBL
Match: A0A0A0K6L7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037600 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 112/141 (79.43%), Postives = 116/141 (82.27%), Query Frame = 0


Query: 27  MQNFLIPSPKINLLLKQKKMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATV 86
           MQ FLIP  +   L     MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSK DNEATV
Sbjct: 1   MQIFLIPLSQNQSLTIHTNMSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKTDNEATV 60

Query: 87  ETNGVEDAKY--GGYDRGYGGRDRYGHGGYGGRGGYGGRGGYGGRGGY-GDRGGYGGGCR 146
           ETNGVEDAKY  GGYDRGYGG    G+G  GGRGGY GRG YGGRGGY G RGGYG GCR
Sbjct: 61  ETNGVEDAKYGRGGYDRGYGGGHDRGYG--GGRGGY-GRGHYGGRGGYGGGRGGYGRGCR 120

Query: 147 YGRCGYRCCSYAGEVVEGAKP 165
           YGRCG++CCSYAGEVVEGAKP
Sbjct: 121 YGRCGHKCCSYAGEVVEGAKP 138

[Close]

BLAST of ClCG02G002460 vs. TAIR 10
Match: AT2G05540.1 (Glycine-rich protein family )

HSP 1 Score: 61.2 bits (147), Expect = 8.8e-10
Identity = 66/134 (49.25%), Postives = 83/134 (61.94%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKYGGY-DRGYG 105
           M+SKA +FL L++  VLL++SEV ARDLAE S+++ N    E    E  ++GG+   GYG
Sbjct: 1   MASKALLFLSLIV--VLLIASEVVARDLAEKSAEQKNNERDEVKQTE--QFGGFPGGGYG 60

Query: 106 GRDRYGHGGYGGR--GGYGGR--------GGYGGR-GGYGDRGGYGGGCRYGRC--GY-- 161
           G   +  GGYGG   GGYG R        GGYG R GGYG+RG  GG CRYG C  GY  
Sbjct: 61  G---FPGGGYGGNPGGGYGNRGGGYRNRDGGYGNRGGGYGNRG--GGYCRYGCCYRGYYG 120

[Close]

BLAST of ClCG02G002460 vs. TAIR 10
Match: AT2G05530.1 (Glycine-rich protein family )

HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05
Identity = 57/124 (45.97%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 46  MSSKAFVFLGLLLAFVLLLSSEVAARDLAETSSKKDNEATVETNGVEDAKYGGYDRGYGG 105
           M+SKA V  GL    VLL+ +EVAA              TV++   E  +   Y+ G+GG
Sbjct: 1   MASKALVLFGLFA--VLLVVTEVAAA-----------SGTVKSESGETVQPDQYNGGHGG 60

Query: 106 RDRY-GHGGYGGRGGYGGRGGYGGRGGY--GDRGGYGGGCRYGRC--GY----RCCSYAG 161
              Y G GGY G GG+ G GGY G GGY  G  GG  G CRYG C  GY    RCCSYAG
Sbjct: 61  NGGYNGGGGYNGGGGHNG-GGYNGGGGYNGGGHGGRHGYCRYGCCYRGYHGCSRCCSYAG 110

The following BLAST results are available for this feature:

BLAST of ClCG02G002460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952570.1	1.7e-47	83.33	cold and drought-regulated protein CORA-like isoform X1 [Cucurbita moschata]	[more]
XP_022969295.1	6.4e-47	82.73	glycine-rich protein-like [Cucurbita maxima]	[more]
XP_023554637.1	1.2e-45	81.29	cold and drought-regulated protein CORA-like isoform X2 [Cucurbita pepo subsp. p...	[more]
KAG6572253.1	3.9e-44	85.60	Glycine-rich protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7011884.1	3.3e-43	85.48	Glycine-rich protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of ClCG02G002460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23137	4.0e-07	47.97	Glycine-rich protein OS=Nicotiana tabacum OX=4097 GN=GRP PE=2 SV=1	[more]
P11898	4.9e-05	45.31	Glycine-rich protein HC1 OS=Oxybasis rubra OX=3560 PE=2 SV=1	[more]
P37703	1.8e-04	44.53	Glycine-rich protein DC9.1 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
O22612	3.1e-04	51.35	Dormancy-associated protein 2 OS=Pisum sativum OX=3888 GN=DRM2 PE=2 SV=1	[more]

BLAST of ClCG02G002460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GM55	8.2e-48	83.33	cold and drought-regulated protein CORA-like isoform X1 OS=Cucurbita moschata OX...	[more]
A0A6J1HZJ5	3.1e-47	82.73	glycine-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468344 PE=4 SV=1	[more]
A0A6J1GKL6	3.0e-42	78.26	glycine-rich protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A5D3DE59	2.8e-40	90.91	Cold and drought-regulated protein CORA-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0K6L7	1.1e-39	79.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037600 PE=4 SV=1	[more]

BLAST of ClCG02G002460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05540.1	8.8e-10	49.25	Glycine-rich protein family	[more]
AT2G05530.1	2.9e-05	45.97	Glycine-rich protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010800	Glycine rich protein	PFAM	PF07172	GRP	coord: 46..142 e-value: 9.1E-19 score: 68.0
IPR010800	Glycine rich protein	PANTHER	PTHR37389	FAMILY NOT NAMED	coord: 46..162
None	No IPR available	PANTHER	PTHR37389:SF9	GLYCINE-RICH PROTEIN	coord: 46..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G002460.2	ClCG02G002460.2	mRNA