ClCG02G001850 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G001850
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	sigma intracellular receptor 2-like
Location	CG_Chr02: 1856652 .. 1858716 (-)
RNA-Seq Expression	ClCG02G001850
Synteny	ClCG02G001850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATCCCCATCTCATCCAACAAAATTATCAATCGCTCTGTTTCGCGGACATTGTGAGAAGAAAGCTCAGTGGAAAACATGGGCGCTCTTCTCAAGCTCGTCGACGTCTTACTATTCCTCGTCTTCCTTCTTCTCGCATTCATATCGCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATCTTAAGACCTCCTACATCCGCCAATCCGGGGATTATTTAATGGCCGAATCCCCTCCCTTCGTCGTTGGCCTCATTTGGCTCGAGCTTCTCTTTCAATGGCCTCTTATGCTGCTCAATCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAATACCACTTGCTTGATCTATGGCGTTTCTGTTGTGGCTTCCATGGTATTTTTCTATTCCACCTCCTTCCAATTTGATTGCTAATCTGTTCTATTGTTTCATTGAATCAATACATTTTTGCCTGCATATTGTGTTTCTGGTAATTGCATACTAGCTCTGTTGTGTGTTCAATTTTGTAATTGGTACAAACAATGTCATATCTTTGTTATGTAGTTTGATGGTGTTGGACTCTGGATATCGCCACTTGATAGAAGTTGCAGATAGTGGTTTGAGACAGCTTTGTATCATAGTTTATAAATGGTAGTTTGAGTTTTCGAGGTTTTAAGATTGTGTCTATTTAGTTTTTGTGCTTCAGAACGTTTATAATGGATACTTGAATTTTGTGTTTGATATAATAGTAAATTTACCTTCATCCATCAACGTAACCTTTTGAGTCAATCGGTGATTTAATATGACATTTGAGCAAGTGGTTTAGGAGGTTGTGTATTTAAAACTCGGCAATGTTATTTCCTCCCCATTTAATATTGGCTTTCACTTGGTGAGTCTTCTACATATTTCAAACTAACCGGTGTAGGGAGTGTTAGATGATATAATATTAAATTTACTTTCACTCGTCAACATTAGTTTTTGGGTCTATCGGTGATTTAACAAATAGATACATGTTTTAATTTGTGAGTATCTTACTTTAGACAGGCTCAAGAAATTAGTGGCACAGATGATAAATTGATGGACTTAATACCAAAGCTTATAATTTAACCTTTTCTTTTCTAATTTCCTTGTTGTTTTTCAGCTCAATAAAGGTTTTCAATTCATTTCTTGATTCTCCATGATATGTGCTTGATAATGTTGATGACAGTTATAGTCAGTGATTTAAGACAGTTTTGATAATATTTCTCATAAGATAGTTCTAAACTAGACTGGAAACTGATTTCTTGTCAATAAACTAAGGTTTTCAACTTTTAGGCAATCAGGCACTTAGATTAGTAATGCATTTAGGATAGTGTTTGAACATCTTTTGAGTATACTTAGATATTTTAACACTGATATATTATATGCTCGAATACATGTTGCTAAGGATTTCTTCTGCTTCATTTGTTAACTAAATGTAGAGATCCACTGGTTTCTGTTTCATTTCTTTTACAGAAATGTTACTTATACTCTGTTTCTTCTCACATTACATTACATTGTCTGGCTGTGTAATTTCAAGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTCTGGCCATGCTACGCGGGCTAGTACCGTGTTCGAGCAAGGCTACGATCACCAGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAACGGCCATCCTAAATCGCCAAAGGAGTGCTTGTATTGCCTTTTCTGCAGCCGATTTGGTTTAGTTAGTATTAACTGAGGACGACCTTACTTGAACATGATCTGTTCTAAAGGTTGTACAACTGTGTCATTGAGTTCTAAAGTTAGTATTAACCGAGGATGTTGGTTCCTTTAGGTAATTGGTTCAACTTTGGCTATGGATCATTTAGCATTTGCCCCTTTTAACATTCCATTAGTCTTTCATTCTATGAATGGTAATGGTTCAAAGGGACCCTTTTGAATTTTGAATGATAATAAAAGCCAATGAGCTTAAGATTTGAGAATGG

mRNA sequence

AAGATCCCCATCTCATCCAACAAAATTATCAATCGCTCTGTTTCGCGGACATTGTGAGAAGAAAGCTCAGTGGAAAACATGGGCGCTCTTCTCAAGCTCGTCGACGTCTTACTATTCCTCGTCTTCCTTCTTCTCGCATTCATATCGCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATCTTAAGACCTCCTACATCCGCCAATCCGGGGATTATTTAATGGCCGAATCCCCTCCCTTCGTCGTTGGCCTCATTTGGCTCGAGCTTCTCTTTCAATGGCCTCTTATGCTGCTCAATCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAATACCACTTGCTTGATCTATGGCGTTTCTGTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTCTGGCCATGCTACGCGGGCTAGTACCGTGTTCGAGCAAGGCTACGATCACCAGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAACGGCCATCCTAAATCGCCAAAGGAGTGCTTGTATTGCCTTTTCTGCAGCCGATTTGGTTTAGTTAGTATTAACTGAGGACGACCTTACTTGAACATGATCTGTTCTAAAGGTTGTACAACTGTGTCATTGAGTTCTAAAGTTAGTATTAACCGAGGATGTTGGTTCCTTTAGGTAATTGGTTCAACTTTGGCTATGGATCATTTAGCATTTGCCCCTTTTAACATTCCATTAGTCTTTCATTCTATGAATGGTAATGGTTCAAAGGGACCCTTTTGAATTTTGAATGATAATAAAAGCCAATGAGCTTAAGATTTGAGAATGG

Coding sequence (CDS)

ATGGGCGCTCTTCTCAAGCTCGTCGACGTCTTACTATTCCTCGTCTTCCTTCTTCTCGCATTCATATCGCCTCTAATCGATTTCCAGGTTATTTTCCCTCAAACCCTTTTCCCTGATTTTCTCATCGATCTTAAGACCTCCTACATCCGCCAATCCGGGGATTATTTAATGGCCGAATCCCCTCCCTTCGTCGTTGGCCTCATTTGGCTCGAGCTTCTCTTTCAATGGCCTCTTATGCTGCTCAATCTCTACGCCTTCTTGGCTTCCAAGCCATGGTACAATACCACTTGCTTGATCTATGGCGTTTCTGTTGTGGCTTCCATGTCTGCTATAATGGGTGAAATGGTTGGGTCGAACCGAGCATCTACTACTCTGAAGACAATATACTACCCCTTCTTGGGTTTGGGAGTTCTGGCCATGCTACGCGGGCTAGTACCGTGTTCGAGCAAGGCTACGATCACCAGCACCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

Protein sequence

MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAESPPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNRASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA

Homology

[Close]

BLAST of ClCG02G001850 vs. NCBI nr
Match: XP_038887415.1 (sigma intracellular receptor 2 [Benincasa hispida])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 154/166 (92.77%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFLVFLLLAFISPLIDFQ+IFPQTLFPDFLIDLK SYI Q GDYLMAES
Sbjct: 1   MGALLKLVDALLFLVFLLLAFISPLIDFQLIFPQTLFPDFLIDLKASYIHQYGDYLMAES 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPFVVGL+WLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAI+GEMVGSNR
Sbjct: 61  PPFVVGLVWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           ASTTL TIYYPFLG GVLAMLRGLV CSSKAT+T TRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGFGVLAMLRGLVSCSSKATVTGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. NCBI nr
Match: XP_004144492.1 (sigma intracellular receptor 2 [Cucumis sativus] >KGN43532.1 hypothetical protein Csa_020333 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 146/166 (87.95%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGA LKL+DVLLFL+FL+LA +SPLIDFQ+IFP TLFPDFLIDLKTSY RQ GDYLMAES
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGL+WLEL FQWP+MLLNLYAFLASKPWYNTTCLIYGVSVV+SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           ASTTL TIYYPFLGLGVLAMLRGLVPCSSKA IT TRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. NCBI nr
Match: XP_022969277.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFL FLLLA +SPLIDFQVIFPQTLFP FLIDLKT YIRQSGDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P FVV L+WLELLFQWPL+LLNLYAFLA+KPWYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. NCBI nr
Match: XP_022952624.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 146/166 (87.95%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFL FLLLA +SPLIDFQVIFP+TLFP FLIDLKT YIRQSGDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P FVVGL+WLELLFQWPL+LLNLYAFLA+K WYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. NCBI nr
Match: KAG7011913.1 (Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 144/166 (86.75%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFL FLLLA +SPLIDFQVIFP+TLFP FLIDLKT YIRQSGDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P FVVGL+WLELLFQWPL+LLNLYA LA+K WYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLAMLRGLV CSSKATIT T+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 42/154 (27.27%), Postives = 71/154 (46.10%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           M    +L++ + F  F     I+ L+D Q + P +L+P  L+DL   Y     D+LMA  
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFL-ASKPWYNTTCLIYGVSVVASMSAIMGEMVG-- 120
           PP+    ++ E + Q P   +  YAF      W     ++Y   V  ++ AI+G ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SNRASTTLKTIYYPFLGLGVLAML 142
                     + +   TL +IY P+L + VL +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of ClCG02G001850 vs. ExPASy TrEMBL
Match: A0A0A0K5K2 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 146/166 (87.95%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGA LKL+DVLLFL+FL+LA +SPLIDFQ+IFP TLFPDFLIDLKTSY RQ GDYLMAES
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGL+WLEL FQWP+MLLNLYAFLASKPWYNTTCLIYGVSVV+SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           ASTTL TIYYPFLGLGVLAMLRGLVPCSSKA IT TRPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. ExPASy TrEMBL
Match: A0A6J1HVX1 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.3e-72
Identity = 147/166 (88.55%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFL FLLLA +SPLIDFQVIFPQTLFP FLIDLKT YIRQSGDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P FVV L+WLELLFQWPL+LLNLYAFLA+KPWYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. ExPASy TrEMBL
Match: A0A6J1GM86 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455258 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-72
Identity = 146/166 (87.95%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFL FLLLA +SPLIDFQVIFP+TLFP FLIDLKT YIRQSGDY+MA+S
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P FVVGL+WLELLFQWPL+LLNLYAFLA+K WYNTTCLIYGVS+VASMSAI+GEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           AS TL TIYYPFLGLGVLAMLRGLV CSSKATIT TRPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. ExPASy TrEMBL
Match: A0A5D3C9W7 (Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004140 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 141/167 (84.43%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGA LKL+D LLFL+FL+LA ISP IDFQ+IFPQTLFPDFLIDLK SY+RQ GDY+MAES
Sbjct: 1   MGAFLKLIDALLFLIFLILAIISPPIDFQLIFPQTLFPDFLIDLKASYVRQYGDYIMAES 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           PPF+VGL+WLEL FQWPLMLLNLYAFLASKPWY TTCLIYGVSVV SMSA++GEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPLMLLNLYAFLASKPWYKTTCLIYGVSVVTSMSAVLGEMVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATIT-STRPSNGRKKRA 167
           ASTTL  +YYPF+GLGVLAMLRGLVPCSSKA IT +TRPSNGRKKRA
Sbjct: 121 ASTTLLAMYYPFMGLGVLAMLRGLVPCSSKAAITGTTRPSNGRKKRA 167

[Close]

BLAST of ClCG02G001850 vs. ExPASy TrEMBL
Match: A0A6J1JIQ0 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-64
Identity = 130/166 (78.31%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGALLKLVD LLFL FLLLA + PLIDFQ +FP++ +PDF+IDLK+ Y+ QSGDYLM E+
Sbjct: 1   MGALLKLVDALLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKSWYVAQSGDYLMVEA 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P FVVGLIW ELLFQWPL+ LNLYAFL+SK W+NTTCLIYGVS+V+SMSA MGE+VGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWFNTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKRA 167
           AS TL TIY+PF+GLGVLAMLRGLVPCSSKATI   RPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAMLRGLVPCSSKATINGPRPSNGRKKRA 166

[Close]

BLAST of ClCG02G001850 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 168.3 bits (425), Expect = 5.2e-42
Identity = 89/165 (53.94%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGAL KL+DV LF+ F+ +A I+PLID Q   P  ++P FL DLK+ YI   GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGL+W ELLF WPL + N+YA LA K W+ TTCL+YG S+V SM+AI+G+M+GS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTRPSNGRKKR 166
           AS  L  +Y PF+G G+LA+LRGLV  S+K T +S + S    +R
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGSSGKRSTIMPRR 165

[Close]

BLAST of ClCG02G001850 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-40
Identity = 88/168 (52.38%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGA  KL+D +LFL F L+A I+PLID Q   P  +FP F++DL   YI + GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F+VGL+W ELL  WPL ++N+YA LA K W+ TT ++YG SVV SM+AI+GEM+GS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKA-TITSTRPS-NGRKKRA 167
           AS  L  +Y PF+G+G+LA+LRGL+  S+K+      RP+   R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of ClCG02G001850 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 141.4 bits (355), Expect = 6.7e-34
Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGAL KL+++ LF  F L+A   PL++ Q++FP  ++P  L DLK  Y  +  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F VGL+W E++F  PL ++N+YA L SK W+ TT L+YG S + SM+AI+G+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTR 158
            +  L   Y PF+GL +LAMLRGLV CS+K +    R
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRSTVLAR 156

[Close]

BLAST of ClCG02G001850 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 141.4 bits (355), Expect = 6.7e-34
Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLVFLLLAFISPLIDFQVIFPQTLFPDFLIDLKTSYIRQSGDYLMAES 60
           MGAL KL+++ LF  F L+A   PL++ Q++FP  ++P  L DLK  Y  +  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFVVGLIWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAIMGEMVGSNR 120
           P F VGL+W E++F  PL ++N+YA L SK W+ TT L+YG S + SM+AI+G+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASTTLKTIYYPFLGLGVLAMLRGLVPCSSKATITSTR 158
            +  L   Y PF+GL +LAMLRGLV CS+K +    R
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRSTVLAR 156

The following BLAST results are available for this feature:

BLAST of ClCG02G001850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887415.1	3.0e-76	92.77	sigma intracellular receptor 2 [Benincasa hispida]	[more]
XP_004144492.1	2.8e-74	87.95	sigma intracellular receptor 2 [Cucumis sativus] >KGN43532.1 hypothetical protei...	[more]
XP_022969277.1	2.6e-72	88.55	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]
XP_022952624.1	1.3e-71	87.95	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]
KAG7011913.1	1.4e-70	86.75	Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of ClCG02G001850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	2.0e-06	27.27	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of ClCG02G001850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5K2	1.4e-74	87.95	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4...	[more]
A0A6J1HVX1	1.3e-72	88.55	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 ...	[more]
A0A6J1GM86	6.3e-72	87.95	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A5D3C9W7	9.1e-71	84.43	Transmembrane protein 97-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1JIQ0	2.2e-64	78.31	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 ...	[more]

BLAST of ClCG02G001850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05210.1	5.2e-42	53.94	Transmembrane protein 97, predicted	[more]
AT2G32380.1	2.2e-40	52.38	Transmembrane protein 97, predicted	[more]
AT1G05220.1	6.7e-34	47.77	Transmembrane protein 97, predicted	[more]
AT1G05220.2	6.7e-34	47.77	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..158 e-value: 4.1E-30 score: 102.6
None	No IPR available	PFAM	PF05241	EBP	coord: 40..126 e-value: 1.7E-15 score: 57.4
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..166
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..166
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 16.138117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G001850.1	ClCG02G001850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane