ClCG02G001440 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G001440
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein TIC 20
Location	CG_Chr02: 1595679 .. 1597872 (+)
RNA-Seq Expression	ClCG02G001440
Synteny	ClCG02G001440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTAGAGATGTACCCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTCCGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGCCGACAACGACGGCGATAGGCGCATCCGTACGGTATGTTGTCATCTTCGATTGTTTCTTTAATCCTCTGTTCTTTCCCCTTTATTGTTAATTCGTCGAACCGAAACTGGTAAATAATTATAGTTCTTGATTTTGAGCGTTTTATTTCAAGACGTTTTTAATTTTTTTTTATTGATTGTTGATGTTTCGTTAGTTACTATAAACAGAGAGTGTATTTGGCATCCGATAGTTTTGACTCTTTTCTTATATCTGGGGAAAAGACTATTTTAGATGATTTGGTGGGAAATCCTAGGATTGTTATGTCAATCATTTTAATTTGTCAGTTGTTAAATGAATTACTTCAAGTATTGGGTATTTGGCATTATTGATAACACTCTTCCTGCTGCACCCTCTGTTGATCTCAATGTAAAATTTTAATGGAGATTTTGGCATTCTGAGAAATTTGGCTCTGGTTTTGCTGTATAACTTCAATTCATCTTGAATTAGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTGGACACAAAACTTGTTTTATCTATTACCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTTCTTCTAGAGGTATGAAATTTCTTTAACTCTAGCGTTTTAACCTTTCAGTTTGGTCTGAACATTTGCACAAATATTGTTAACTCCTTTAGTGTATGCACAAACTTCGTGATGGTGGATTGTAGAAGATCTCCCTCTTTTTTTACTCTGTCTGTGGGATTATTATACTCTTGATTGTTGATTAAATGTAGCTAGGGGCAGTTGCATATATAGTTAGGGGCAAGTCCAAAGTATTAGTAGATATAACACAATGCATAAGAATTTGGAGATATAGTAAAATCTAGATTCAGCTCTCGGAGTCTATCAGTAATCAATAATAGAAGTCTATCAGCGATAAAGTCTATCACTTATAGATTTTGCTATATTTGCAATTCTTTAAAAATGTTGCTATCACTCAATTATTAGTCCTAAAAGTGCTACTCATTGCAATTACCCCTAAAGGTAACGGGATAAGTTTACCTTAGGAAATCGATGTTTGGACAACCCAAAACCTTGTCTAAGAACTTTGGTAGTCTTTGGAAGAGAGGGTTGATCATATTATTCAGCTAGGAATCAGGAAGTAGTGCATTGTTCTCATATCTCATAATATAATTTAACCAATTTTTGCTATATGATTCAATGCCATCATATTTGTAGTTGGAGAAGAACTAATGAAGGCCATTCTGAATATTATGATTTCCAGGAATGTTGATATCACAGATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGTGCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTAGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGACCATTCTAG

mRNA sequence

ATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTAGAGATGTACCCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTCCGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGCCGACAACGACGGCGATAGGCGCATCCGTACGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTGGACACAAAACTTGTTTTATCTATTACCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTTCTTCTAGAGGAATGTTGATATCACAGATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGTGCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTAGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGACCATTCTAG

Coding sequence (CDS)

ATGCTAAAACGACCCCAAAGGTTTTGGGTATTTCCTATTAAGTGCCCAATAAAATATGATATTAGAGATGTACCCTATTCTTGCATGCAAAGTAACACGGCCCTACCCTCCGCCTCACTTTTCCCTTCTGCGCGAAAAACAGGAAAGATGTTTGCGGTTGGTCCGAGCAACGCCCGACTCCACTGCAACTCACCGAATCCGCTCCTCCCGCTGCCGCCGCCGACAACGACGGCGATAGGCGCATCCGTACGGTACAAGAATGTGTTTCTGAAAAGATGTTTCAAGCCCAGCCAAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTGGACACAAAACTTGTTTTATCTATTACCAATACTAAACAGGAACTTTGTAAAGAACTGAAGCTTTCTTCTTCTAGAGGAATGTTGATATCACAGATTTCTGCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGTCTATTCCACAAACTTCCACTTTTACCTCCACGAAATTGTGCTGGAAAGAGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCTACTCTGGGGTCACCCAAAAACCAGAATGGTGGTGGAGAACTTTGGCTTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCTTGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCTGGATCTGTTCAGAAGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTCGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCATTAGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTAGACATCATATGGTATGCAAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAGTATTGGGGAGCAGTGGGGTTCATCTACATTTCCATCTTGTTGGTGTGTATAAGGAGTTCTCTCTTGGGGACTTATGCCAAAATACCATTCATTTTCGAAAACGCACTTATTCATACATTCTTTAGTATAGGACGATATTATCGACCATTCTAG

Protein sequence

MLKRPQRFWVFPIKCPIKYDIRDVPYSCMQSNTALPSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF

Homology

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BLAST of ClCG02G001440 vs. NCBI nr
Match: XP_038888476.1 (protein TIC 20-IV, chloroplastic [Benincasa hispida])

HSP 1 Score: 590.9 bits (1522), Expect = 7.4e-165
Identity = 287/312 (91.99%), Postives = 299/312 (95.83%), Query Frame = 0


Query: 45  RKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQC 104
           +KTGKMFAVGPSNARLHCNSPNPLLP PP T TA GASVRYK+VFLKRCFKPSQVV+PQC
Sbjct: 23  KKTGKMFAVGPSNARLHCNSPNPLLP-PPATATATGASVRYKDVFLKRCFKPSQVVIPQC 82

Query: 105 RRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLP 164
            R GS+NLDTKLVLSITNTKQE  KELK SSS+G+LISQ+SAAASPHLSGEQGSLFHKLP
Sbjct: 83  HRFGSSNLDTKLVLSITNTKQEPYKELKCSSSKGILISQLSAAASPHLSGEQGSLFHKLP 142

Query: 165 LLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPL 224
           LLPPRNCAGKSP+AFRDDSYSVKR+SGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPL
Sbjct: 143 LLPPRNCAGKSPQAFRDDSYSVKRHSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPL 202

Query: 225 LEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSL 284
           LEHLDVDNLIFY+PG VQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLET L
Sbjct: 203 LEHLDVDNLIFYIPGFVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETLL 262

Query: 285 DIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIH 344
           DI+WY+SNFMPLIHYNGTYAMQYW AVGFIYIS LLVCIRSSLLGTYAKIPFIFENALIH
Sbjct: 263 DIVWYSSNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 322

Query: 345 TFFSIGRYYRPF 357
           TFFSIGRYYRPF
Sbjct: 323 TFFSIGRYYRPF 333

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BLAST of ClCG02G001440 vs. NCBI nr
Match: KAG7011953.1 (Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.1 bits (1437), Expect = 5.3e-155
Identity = 282/349 (80.80%), Postives = 302/349 (86.53%), Query Frame = 0


Query: 15  CPIKYDIRDVPYSCMQSNTALPSASLFPSARKT------GKMFAVGPSN-ARLHCNSPNP 74
           CPIKY+IRDVPYSCM S TAL +ASLF    +T      GKMFAV PS+ ARL CNSPNP
Sbjct: 6   CPIKYEIRDVPYSCMPSITALSTASLFLFCAETGKIGKIGKMFAVAPSSGARLRCNSPNP 65

Query: 75  LLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQEL 134
           LL   P  T A  +SVRY++V LK CFKPSQVV+PQCRRLG ANL T LVLSI+NTKQE 
Sbjct: 66  LLS-TPAKTMATASSVRYRDVILKGCFKPSQVVVPQCRRLGCANLGTNLVLSISNTKQEP 125

Query: 135 CKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVK 194
           CKELK SSS GMLIS +SAAASP L GEQGSLFHKLPLLPPR  AGKSP+AFRDDSYSVK
Sbjct: 126 CKELKFSSSGGMLISHLSAAASPTLCGEQGSLFHKLPLLPPRKYAGKSPQAFRDDSYSVK 185

Query: 195 RYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWW 254
           R+S VT+KPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ LPWW
Sbjct: 186 RHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLNVDNLIFYVPGAVQNLPWW 245

Query: 255 FPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQY 314
           FP LYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQY
Sbjct: 246 FPTLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTALDILWYTSNFMPLIHYNGTYSMQY 305

Query: 315 WGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           W AVGFIYISIL +CIR SLLGTYAKIPFI ENALIHTFFS GRY+RPF
Sbjct: 306 WAAVGFIYISILSLCIRRSLLGTYAKIPFISENALIHTFFSTGRYFRPF 353

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BLAST of ClCG02G001440 vs. NCBI nr
Match: XP_004144571.2 (protein TIC 20-IV, chloroplastic [Cucumis sativus] >KAE8645757.1 hypothetical protein Csa_020314 [Cucumis sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 7.4e-149
Identity = 275/329 (83.59%), Postives = 283/329 (86.02%), Query Frame = 0


Query: 29  MQSNTAL-PSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLPPPTTTAIGASVRYKN 88
           MQSNTAL  SASLFP ARKTGKMFA                     PT TA GAS+RY  
Sbjct: 1   MQSNTALTSSASLFPFARKTGKMFA-----------------ETTTPTPTAAGASLRYSG 60

Query: 89  VFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAA 148
           VFLKRCFKPS VV PQCRRLGSANLDTKL LSI  TKQ+ CKELK SSSRGM IS ISAA
Sbjct: 61  VFLKRCFKPSLVVTPQCRRLGSANLDTKLALSIAKTKQKPCKELKFSSSRGMSISHISAA 120

Query: 149 ASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVP 208
           ASP+LSGEQGSLFHKLPLLPPR  A K PRAFRDDSYSVKR SGVTQKP+WW RTLACVP
Sbjct: 121 ASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVP 180

Query: 209 YLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELP 268
           YLMALQMSSTAYYL+PLLEHLDVDNLIFYVPGSVQ+LPWWFPMLYFNLAYFGVVRNKELP
Sbjct: 181 YLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELP 240

Query: 269 HFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSL 328
           HF+RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW AV FIYIS LLVCIRSSL
Sbjct: 241 HFVRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSL 300

Query: 329 LGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           LGTYAKIPFIFENALIHTFF+IGRYYRPF
Sbjct: 301 LGTYAKIPFIFENALIHTFFNIGRYYRPF 312

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BLAST of ClCG02G001440 vs. NCBI nr
Match: XP_023554543.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 529.3 bits (1362), Expect = 2.6e-146
Identity = 269/335 (80.30%), Postives = 290/335 (86.57%), Query Frame = 0


Query: 29  MQSNTALPSASLFPSARKT------GKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGA 88
           M S TAL +ASLF    +T      GKMFAV PS+ ARL CNSPNPLL + P TT A  +
Sbjct: 1   MPSITALSTASLFLFCAETGKIGKIGKMFAVAPSSGARLRCNSPNPLLAM-PATTMATAS 60

Query: 89  SVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLI 148
           SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+NTKQE CKELK SSSRGML+
Sbjct: 61  SVRYRDVVLKGCFKPSQVVVPQCRRLDCANLGTNLVLSISNTKQEPCKELKFSSSRGMLM 120

Query: 149 SQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWR 208
           S +SAAASP L GEQGSLFHKLPLLPPR  A KSP+AFRDDSY VKR+S VT+KPEWWWR
Sbjct: 121 SHLSAAASPTLGGEQGSLFHKLPLLPPRKYARKSPQAFRDDSYGVKRHSMVTKKPEWWWR 180

Query: 209 TLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVV 268
           TLACVPYLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVV
Sbjct: 181 TLACVPYLMALQMSSTAYYLLPLLEHLNVDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVV 240

Query: 269 RNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV 328
           RNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Sbjct: 241 RNKELPHFIRFHVMMGMLLGTALDILWYTSNFMPLIHYNGTYSMQYWAAVGFIYISILSL 300

Query: 329 CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           CIRSSLLGTYAKIPFI ENALIHTFFS GRY+RPF
Sbjct: 301 CIRSSLLGTYAKIPFISENALIHTFFSTGRYFRPF 334

[Close]

BLAST of ClCG02G001440 vs. NCBI nr
Match: XP_022952618.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 523.5 bits (1347), Expect = 1.5e-144
Identity = 267/335 (79.70%), Postives = 286/335 (85.37%), Query Frame = 0


Query: 29  MQSNTALPSASLF------PSARKTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGA 88
           M S TAL +AS F          K GKM AV PS+ ARL CNS NPLL + P TT A  +
Sbjct: 1   MPSITALSTASPFLFCAETGKVGKIGKMIAVAPSSGARLRCNSQNPLLSM-PATTMATAS 60

Query: 89  SVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLI 148
           SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+NTKQE CKELK SSSRGMLI
Sbjct: 61  SVRYRDVVLKGCFKPSQVVVPQCRRLDCANLGTNLVLSISNTKQEPCKELKFSSSRGMLI 120

Query: 149 SQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWR 208
           S +SAAASP L GEQGSLFHKLPLLPPR  AGKSP+ FRDDSY VKR+S VT+KPEWWWR
Sbjct: 121 SHLSAAASPTLCGEQGSLFHKLPLLPPRKYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWR 180

Query: 209 TLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVV 268
           TLACVPYLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVV
Sbjct: 181 TLACVPYLMALQMSSTAYYLLPLLEHLNVDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVV 240

Query: 269 RNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV 328
           RNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Sbjct: 241 RNKELPHFIRFHVMMGMLLGTALDILWYTSNFMPLIHYNGTYSMQYWAAVGFIYISILSL 300

Query: 329 CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           CIRSSLLGTYAKIPFI ENALIHTFFS GRY+RPF
Sbjct: 301 CIRSSLLGTYAKIPFISENALIHTFFSTGRYFRPF 334

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BLAST of ClCG02G001440 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.7e-53
Identity = 109/254 (42.91%), Postives = 160/254 (62.99%), Query Frame = 0


Query: 111 NLDT--KLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGE------QGSLFHK 170
           N+D+  KL LS ++  +   +E+   S+   +    +A +S  L          G   H+
Sbjct: 38  NVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLAPGLRRHR 97

Query: 171 LPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLL 230
            P+ P         R  +DD + +K    + ++PEWWWRTLACVPYL++LQ+S   +Y+ 
Sbjct: 98  RPIEP--------ARVAKDDFFKIK-LPKIAERPEWWWRTLACVPYLISLQISDVGFYVQ 157

Query: 231 PLLE-HLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLE 290
           P LE H  + ++I+++PG++ + P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLE
Sbjct: 158 PFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLE 217

Query: 291 TSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENA 350
           T+L +IW  SNF PLIH+ G + M YW A+GF YI +LL CIR +L G YA+IPF+ + A
Sbjct: 218 TALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAA 277

Query: 351 LIHTFFSIGRYYRP 356
            IHT F++G + RP
Sbjct: 278 SIHTLFNLGGFQRP 282

[Close]

BLAST of ClCG02G001440 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-46
Identity = 104/212 (49.06%), Postives = 138/212 (65.09%), Query Frame = 0


Query: 136 SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQK 195
           SRG+ +S +SA++S  L+GEQGSL   LP+LP R     +PRA +D   S  R+  +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 196 PEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPML 255
           P+WWWRTLAC+PYLM L      + TAY+L P LE  D + L +   G++ +LP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 256 YFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAV 315
           YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 316 GFIYISILLVCIRSSLLGTYAKIPFIFENALI 344
            F Y+  +L  IR +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of ClCG02G001440 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-36
Identity = 91/268 (33.96%), Postives = 138/268 (51.49%), Query Frame = 0


Query: 80  GASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGM 139
           G +V   +V    C  P++V +   R     +L+ K                     RGM
Sbjct: 5   GGTVSQGSVLCYACQIPAKVAVSSIRSFWGHSLENK--------------------PRGM 64

Query: 140 LISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWW 199
             + +SA +S  LSG Q  L   +P+LP  + +  +PRA +D S    R+  +T+KP WW
Sbjct: 65  TFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKDSSGF--RFPPMTKKPRWW 124

Query: 200 WRTLACVPYLM----ALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNL 259
           WRTL+C+PYL+    A   + TAY+L P + +       F +  ++  LP W  + YF +
Sbjct: 125 WRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLM--AIGTLPRWSLIAYFLI 184

Query: 260 AYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIY 319
           AY  +VR KE PHF RFHV +GML+E +L +    S +MP   Y G   M +W    F++
Sbjct: 185 AYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTAFFVF 244

Query: 320 ISILLVCIRSSLLGTYAKIPFIFENALI 344
           +   + CIR +L+G YA +PF+ + A I
Sbjct: 245 LFTTIECIRCALVGMYADVPFVCDAAYI 248

[Close]

BLAST of ClCG02G001440 vs. ExPASy TrEMBL
Match: A0A0A0K289 (Protein TIC 20 OS=Cucumis sativus OX=3659 GN=Csa_7G045570 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.9e-156
Identity = 286/344 (83.14%), Postives = 295/344 (85.76%), Query Frame = 0


Query: 14  KCPIKYDIRDVPYSCMQSNTAL-PSASLFPSARKTGKMFAVGPSNARLHCNSPNPLLPLP 73
           K  IKY+IRDV YSCMQSNTAL  SASLFP ARKTGKMFA                    
Sbjct: 11  KRSIKYEIRDVAYSCMQSNTALTSSASLFPFARKTGKMFA-----------------ETT 70

Query: 74  PPTTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELK 133
            PT TA GAS+RY  VFLKRCFKPS VV PQCRRLGSANLDTKL LSI  TKQ+ CKELK
Sbjct: 71  TPTPTAAGASLRYSGVFLKRCFKPSLVVTPQCRRLGSANLDTKLALSIAKTKQKPCKELK 130

Query: 134 LSSSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGV 193
            SSSRGM IS ISAAASP+LSGEQGSLFHKLPLLPPR  A K PRAFRDDSYSVKR SGV
Sbjct: 131 FSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGV 190

Query: 194 TQKPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLY 253
           TQKP+WW RTLACVPYLMALQMSSTAYYL+PLLEHLDVDNLIFYVPGSVQ+LPWWFPMLY
Sbjct: 191 TQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLY 250

Query: 254 FNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVG 313
           FNLAYFGVVRNKELPHF+RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW AV 
Sbjct: 251 FNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVA 310

Query: 314 FIYISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           FIYIS LLVCIRSSLLGTYAKIPFIFENALIHTFF+IGRYYRPF
Sbjct: 311 FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 337

[Close]

BLAST of ClCG02G001440 vs. ExPASy TrEMBL
Match: A0A6J1GL44 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 7.0e-145
Identity = 267/335 (79.70%), Postives = 286/335 (85.37%), Query Frame = 0


Query: 29  MQSNTALPSASLF------PSARKTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGA 88
           M S TAL +AS F          K GKM AV PS+ ARL CNS NPLL + P TT A  +
Sbjct: 1   MPSITALSTASPFLFCAETGKVGKIGKMIAVAPSSGARLRCNSQNPLLSM-PATTMATAS 60

Query: 89  SVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLI 148
           SVRY++V LK CFKPSQVV+PQCRRL  ANL T LVLSI+NTKQE CKELK SSSRGMLI
Sbjct: 61  SVRYRDVVLKGCFKPSQVVVPQCRRLDCANLGTNLVLSISNTKQEPCKELKFSSSRGMLI 120

Query: 149 SQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWR 208
           S +SAAASP L GEQGSLFHKLPLLPPR  AGKSP+ FRDDSY VKR+S VT+KPEWWWR
Sbjct: 121 SHLSAAASPTLCGEQGSLFHKLPLLPPRKYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWR 180

Query: 209 TLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVV 268
           TLACVPYLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVV
Sbjct: 181 TLACVPYLMALQMSSTAYYLLPLLEHLNVDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVV 240

Query: 269 RNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV 328
           RNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Sbjct: 241 RNKELPHFIRFHVMMGMLLGTALDILWYTSNFMPLIHYNGTYSMQYWAAVGFIYISILSL 300

Query: 329 CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           CIRSSLLGTYAKIPFI ENALIHTFFS GRY+RPF
Sbjct: 301 CIRSSLLGTYAKIPFISENALIHTFFSTGRYFRPF 334

[Close]

BLAST of ClCG02G001440 vs. ExPASy TrEMBL
Match: A0A6J1HZ71 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.6e-144
Identity = 264/335 (78.81%), Postives = 287/335 (85.67%), Query Frame = 0


Query: 29  MQSNTALPSASLFPSARKT------GKMFAVGP-SNARLHCNSPNPLLPLPPPTTTAIGA 88
           M S TAL +ASLF    +T      GKMFAV P S+ARL CNSPNPLL + P T  A  +
Sbjct: 1   MPSITALSTASLFLFCAETGKIGNIGKMFAVAPSSSARLRCNSPNPLLSM-PATMMATAS 60

Query: 89  SVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLI 148
           SVRY++V LK CFKPSQVV+PQCRRLG ANL   LVL I+NTKQE CKELK SSSRGM+I
Sbjct: 61  SVRYRDVVLKGCFKPSQVVVPQCRRLGCANLGPNLVLFISNTKQEPCKELKFSSSRGMVI 120

Query: 149 SQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWR 208
           S +SAAASP L GEQGSLFHKLPLLPPR  A KSP+AFRDDSY VKR+S +T+KPEWWWR
Sbjct: 121 SHLSAAASPTLCGEQGSLFHKLPLLPPRKYARKSPQAFRDDSYGVKRHSMITKKPEWWWR 180

Query: 209 TLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVV 268
           TLACVPYLMALQMSSTAYYLLPLLEHL+VDNLIFYVPG+VQ LPWWFPMLY NLAYFGVV
Sbjct: 181 TLACVPYLMALQMSSTAYYLLPLLEHLNVDNLIFYVPGAVQNLPWWFPMLYVNLAYFGVV 240

Query: 269 RNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLV 328
           RNKELPHFIRFHVMMGMLL T+LDI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +
Sbjct: 241 RNKELPHFIRFHVMMGMLLGTALDILWYTSNFMPLIHYNGTYSMQYWAAVGFIYISILSL 300

Query: 329 CIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           CIRSSL+GTYAKIPFI ENALIHTFFS GRY+RPF
Sbjct: 301 CIRSSLIGTYAKIPFISENALIHTFFSTGRYFRPF 334

[Close]

BLAST of ClCG02G001440 vs. ExPASy TrEMBL
Match: A0A6J1GMA4 (Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.6e-144
Identity = 259/312 (83.01%), Postives = 277/312 (88.78%), Query Frame = 0


Query: 46  KTGKMFAVGPSN-ARLHCNSPNPLLPLPPPTTTAIGASVRYKNVFLKRCFKPSQVVMPQC 105
           K GKM AV PS+ ARL CNS NPLL + P TT A  +SVRY++V LK CFKPSQVV+PQC
Sbjct: 9   KIGKMIAVAPSSGARLRCNSQNPLLSM-PATTMATASSVRYRDVVLKGCFKPSQVVVPQC 68

Query: 106 RRLGSANLDTKLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGEQGSLFHKLP 165
           RRL  ANL T LVLSI+NTKQE CKELK SSSRGMLIS +SAAASP L GEQGSLFHKLP
Sbjct: 69  RRLDCANLGTNLVLSISNTKQEPCKELKFSSSRGMLISHLSAAASPTLCGEQGSLFHKLP 128

Query: 166 LLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLLPL 225
           LLPPR  AGKSP+ FRDDSY VKR+S VT+KPEWWWRTLACVPYLMALQMSSTAYYLLPL
Sbjct: 129 LLPPRKYAGKSPQVFRDDSYGVKRHSMVTKKPEWWWRTLACVPYLMALQMSSTAYYLLPL 188

Query: 226 LEHLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSL 285
           LEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLL T+L
Sbjct: 189 LEHLNVDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLGTAL 248

Query: 286 DIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENALIH 345
           DI+WY SNFMPLIHYNGTY+MQYW AVGFIYISIL +CIRSSLLGTYAKIPFI ENALIH
Sbjct: 249 DILWYTSNFMPLIHYNGTYSMQYWAAVGFIYISILSLCIRSSLLGTYAKIPFISENALIH 308

Query: 346 TFFSIGRYYRPF 357
           TFFS GRY+RPF
Sbjct: 309 TFFSTGRYFRPF 319

[Close]

BLAST of ClCG02G001440 vs. ExPASy TrEMBL
Match: A0A1S3C1G8 (Protein TIC 20 OS=Cucumis melo OX=3656 GN=LOC103495554 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.5e-142
Identity = 253/282 (89.72%), Postives = 260/282 (92.20%), Query Frame = 0


Query: 75  TTTAIGASVRYKNVFLKRCFKPSQVVMPQCRRLGSANLDTKLVLSITNTKQELCKELKLS 134
           T  A GASVRY +VFLKRCFKPS VVMPQCRRL SANLDTKL LSIT  KQ+ CKELK S
Sbjct: 7   TAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQKPCKELKFS 66

Query: 135 SSRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQ 194
           SSRGMLIS IS+AASPHLSGEQG LFHKLPL PPRN A K PRAFRDDSYSVKR SGVTQ
Sbjct: 67  SSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQ 126

Query: 195 KPEWWWRTLACVPYLMALQMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPMLYFN 254
           KPEWW RTLACVPYLMA+QMSSTAYYL+PLLEHLDVDNLIFYVPGSVQ+LPWWFPMLYFN
Sbjct: 127 KPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFN 186

Query: 255 LAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFI 314
           LAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW AVGFI
Sbjct: 187 LAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGFI 246

Query: 315 YISILLVCIRSSLLGTYAKIPFIFENALIHTFFSIGRYYRPF 357
           YIS LLVCIRSSLLGTYAKIPFIFENALIHTFF+IGRYYRPF
Sbjct: 247 YISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 288

[Close]

BLAST of ClCG02G001440 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-54
Identity = 109/254 (42.91%), Postives = 160/254 (62.99%), Query Frame = 0


Query: 111 NLDT--KLVLSITNTKQELCKELKLSSSRGMLISQISAAASPHLSGE------QGSLFHK 170
           N+D+  KL LS ++  +   +E+   S+   +    +A +S  L          G   H+
Sbjct: 38  NVDSSAKLRLSASSISRRCPREIAPLSATASVDFAAAATSSNQLFANGLPPLAPGLRRHR 97

Query: 171 LPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQKPEWWWRTLACVPYLMALQMSSTAYYLL 230
            P+ P         R  +DD + +K    + ++PEWWWRTLACVPYL++LQ+S   +Y+ 
Sbjct: 98  RPIEP--------ARVAKDDFFKIK-LPKIAERPEWWWRTLACVPYLISLQISDVGFYVQ 157

Query: 231 PLLE-HLDVDNLIFYVPGSVQKLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLE 290
           P LE H  + ++I+++PG++ + P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLE
Sbjct: 158 PFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLE 217

Query: 291 TSLDIIWYASNFMPLIHYNGTYAMQYWGAVGFIYISILLVCIRSSLLGTYAKIPFIFENA 350
           T+L +IW  SNF PLIH+ G + M YW A+GF YI +LL CIR +L G YA+IPF+ + A
Sbjct: 218 TALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAA 277

Query: 351 LIHTFFSIGRYYRP 356
            IHT F++G + RP
Sbjct: 278 SIHTLFNLGGFQRP 282

[Close]

BLAST of ClCG02G001440 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 186.8 bits (473), Expect = 3.0e-47
Identity = 104/212 (49.06%), Postives = 138/212 (65.09%), Query Frame = 0


Query: 136 SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQK 195
           SRG+ +S +SA++S  L+GEQGSL   LP+LP R     +PRA +D   S  R+  +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 196 PEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPML 255
           P+WWWRTLAC+PYLM L      + TAY+L P LE  D + L +   G++ +LP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 256 YFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAV 315
           YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 316 GFIYISILLVCIRSSLLGTYAKIPFIFENALI 344
            F Y+  +L  IR +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of ClCG02G001440 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-42
Identity = 96/196 (48.98%), Postives = 128/196 (65.31%), Query Frame = 0


Query: 136 SRGMLISQISAAASPHLSGEQGSLFHKLPLLPPRNCAGKSPRAFRDDSYSVKRYSGVTQK 195
           SRG+ +S +SA++S  L+GEQGSL   LP+LP R     +PRA +D   S  R+  +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 196 PEWWWRTLACVPYLMAL----QMSSTAYYLLPLLEHLDVDNLIFYVPGSVQKLPWWFPML 255
           P+WWWRTLAC+PYLM L      + TAY+L P LE  D + L +   G++ +LP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 256 YFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWGAV 315
           YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 316 GFIYISILLVCIRSSL 328
            F Y+  +L  IR +L
Sbjct: 241 AFAYLFTVLESIRCAL 253

The following BLAST results are available for this feature:

BLAST of ClCG02G001440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888476.1	7.4e-165	91.99	protein TIC 20-IV, chloroplastic [Benincasa hispida]	[more]
KAG7011953.1	5.3e-155	80.80	Protein TIC 20-IV, chloroplastic, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_004144571.2	7.4e-149	83.59	protein TIC 20-IV, chloroplastic [Cucumis sativus] >KAE8645757.1 hypothetical pr...	[more]
XP_023554543.1	2.6e-146	80.30	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022952618.1	1.5e-144	79.70	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita moschata]	[more]

BLAST of ClCG02G001440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQZ9	2.7e-53	42.91	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
Q8GZ79	4.2e-46	49.06	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	2.3e-36	33.96	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]

BLAST of ClCG02G001440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K289	8.9e-156	83.14	Protein TIC 20 OS=Cucumis sativus OX=3659 GN=Csa_7G045570 PE=3 SV=1	[more]
A0A6J1GL44	7.0e-145	79.70	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A6J1HZ71	4.6e-144	78.81	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111468245 PE=3 SV=1	[more]
A0A6J1GMA4	4.6e-144	83.01	Protein TIC 20 OS=Cucurbita moschata OX=3662 GN=LOC111455252 PE=3 SV=1	[more]
A0A1S3C1G8	1.5e-142	89.72	Protein TIC 20 OS=Cucumis melo OX=3656 GN=LOC103495554 PE=3 SV=1	[more]

BLAST of ClCG02G001440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03320.1	1.9e-54	42.91	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]
AT1G04940.1	3.0e-47	49.06	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	1.0e-42	48.98	HIT-type Zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 176..341 e-value: 2.6E-62 score: 209.8
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 104..356
None	No IPR available	PANTHER	PTHR33510:SF12	PROTEIN TIC 20-IV, CHLOROPLASTIC	coord: 104..356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G001440.1	ClCG02G001440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion