ClCG02G000460 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG02G000460
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ras-related protein Rab-18
Location	CG_Chr02: 503546 .. 508549 (-)
RNA-Seq Expression	ClCG02G000460
Synteny	ClCG02G000460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCAACTCACACAACCTTGCAATTTAGTAAAAATGAAGATCCGTTGAATTGTACAGTTAAAATGAAGCTTTTTTGTGGCTGTCTTACCAATCAATCCATCGGCTGAGTTGACTCCCGAGTTAAGGCCGACCTCGGTAGAGGACTCGGCATTTTCATTTTCAATTCCCTTTTCAAATTCTATAACCTTCGCCACCACGAACAATTGATACGAAACCAATATCAGGGACTTCTTCAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCCTCTTCATTGGACGCGCCATCAATTTTACAGCATTTGGGTATTAATTTTGATCCGTTTTAATGGGATGTCATGTTCGATTTCATTCTGATTCACTCAATTCCATTTCTGTCGCCGTTTCCCCCCTCTTTTTATGTTTTCAATAACATCTCCTTGGTAATGGCGCATGCTGTTTTGCTTTTTACGAATCCGCTGAGATTTGGGTTTTCGTTTCTTTGATTAGGTACGTAAATCGGAAAGCGATCTTATTTTTGAAAATTGTTGATTGGGTTGGAGCCATTGGAGGACGGATTTGATGGATTCGACGTCGAATCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCGGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACATCCGACAGCTTCGAGGATCTCTCACCAACAATCGGTTAGTTCTACCATACGGATCAGATTTTAAGAATTAGTTTGGAATATCCCTTTTTGATTTTGTGGGATCTTGCGCATTCTTTTTAAAAATGAGCGTAGACAAATCGTTGTCTTGTTTGCTGTGGACATTGGTTTATCATTTTAAAGAAAATTGTTGAAAGATAATGAAATGCTAGAGCTGAATTTTCACTTTCACCTTCTGCATGGTATTGAGATGAGATTGAGGGCAAAAAATTAAATGAGAAAATTGAGAGGACCATTGCTAAGAAAATGACGAATAAGATTAAGAGAGGCCATTAATCTTTCAACCGTATTTCATCAAGAGAAGAATGAAACTCTTAGATAATCAGGTCAAGTGTCATTTTTAGGACAGTGTAAGAAACTTAGCTACAAGCTTATCTGAAAAAGTGAAATGAGAAGTCATGAAGGGCTAATTTGTGTGTCAATTTCTAATAGAAAATAATTTCTCCAAGTAATGTATGGTTAACTTTTATATCTTTGTACTGTTATTTGCAGGAATTGCATTATAGCACTAAAAGGCCTTTATTACTTGCGTTTAATAAATGGTTAATTATAATATTTTATTTTGTTTCTACTATGCTCCTTTACTAGTTTCTAGTTTGTAACTTTCCAAACATCAATGAAAAGTTCATTTTCATTGTCAAAAATATATATTGTATACTTTCTACCAGCTCTATTATCACTGGTCGTTTATACTTTTGCATTCTGTTTTGTACTTACCTGCGTAAATATGTGCATATGTTCATCGTGCTGCTCTGGGGCTATTGGTAGAATAGATTGCCTTTTACCTGTTATAAATTGGCTGAATTTCAAACTGCACAGCTGAAATTATGGATTCTCTCTTTCTTATTAAATTATTATTAACAAAATTGAGAATTTTATATGGTATTGATTATAAATCCTACATCTGCATGTTTCATTGTGTTGGCTTGTTTGTTTAAAGTGCGAAACGCCAAAAGCCTTGCTAACTTCTACTTAATTTGTCTTGCGATGGCGGGTAATCATCAGAGAACCAGAAATCACTTCTAATTAGTTGATTGTTATTTTCGTGCGCAGGTGTGGATTTTAAAGTAAAGTATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACAGGTAATTAAGCTTCTCCACATGCATGATTTTTGTAGCATTCTTCTATTCTTTCTTCTTCCTCCATTTTCCTTTTTGAGAGGGCGTTCTCTTTTCCACACATGCAAGATGCATGTTTTTGCAGAGAAGCCCCGATTAGATAAGTAAGATGGTTAATTTACCAGAAGATATTGCATAGTTGATTCTCAATTGCTTAACTATAATTAAGAAGAATAGGCAGCTGGATAGTATACTAAACTATAAATACATTGAGGATTGGCCATTTTCATAGCTTGTTCTTTGTTCACCAGCTGAAAGTTGACTTTTACTTCATGGTCTTGTCATGAACTCCAGCAGAAACTAGTAGGAAATCCATACAGTAATCCTTGATTCATCATATTTTTCACTTGTGTTGACTGTGGAAGTTGGAACAATTTGATACCCAAACTATGAGGCATTAAATAAATGGATGACAAGACAATAAATTTAATCAATTGAGAAATAGATCTGTAAGGCAAAAATGCATGCTAACCTTTGACCATAAGTGTGCCTGGCTCATGGTTCTGCTGTACTGTACAGACAAATGCAACATGAATGAACTCTGCACGTTCATGTATACAGCTTTGTTGAACCTGCAGCGTGCTAGAGCTTTTTCATTGAATGGTTGAATTAAATTTGAATCTGACTTTACAGACTAAGGAATTGCTCAAAGGATAGGTCAGGCTTATTCTAATTCTCAATTGTTTTCCGATGGTTCTTGTGCTGTGAATTATAAAGAGGATATGATTCTTCTTGTTGATTATCCATGACTTATGCGATCGTACTAGGGCATTACTTCTTATATATTCTTGTACTGAACCTGCATGAAAAAAATCTGGTTTACCAGATCTCCAAACAAGGCATTCTGTAGAATCTAACTCAATGTTCAATCATACAGCTGGGCAGGAGAGATTCAGAACATTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGGTGCGTTCTATTCCCTTCTTTATTTGATTGTTTTGAAGGGAAGAAATTCTCGGCTTAGTATAAATATTCAATATCTTAGATGTGTTCAGTTTAAACGTGTTCATGATTTTATCAAATGGTAAGTTCATTTGTTTGGCTGTCCAACACTACTCTACTGCCTTTTGTATTGTGTTGTCTTGATCATGACATCAAAGGTCAACCGTGTCAGTTTATGATGTAACAAGGAGAGAGACATTTACAAACCTGTCTGAGGTATGGGCGAGGGAAATAGATCTATATTCGACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGTATGCGTCTTCAACTTCCATTTGAAAATTTCCATACACCTGAAGCCGTTTACTGTAACATTTGCATAGATGTTGATTAATTGATCAAGTATATGGTGAATTGAAATTCATATTCCAAAGAATTTTCAGGTTAATTACTGATAAACATATTGATAACTTAAGAACCGATTAAATGAGTCATTACATCAAAGGAATTATATTGCCCATTTCCCTTTAGGAAGATTTGTATGAACATTTCGTATTAGTATTTCTAACAAATTTGTTTCTTATAAAAAAAAAGGGTACTTTATATATTTTTTTGGGCTAAATTACAAAAAGAAAACCCTGAACTATGAACCAACTATGAAGTTGGTTTTGATTATATCCTCAAACTTTAAAAAAGTTTCATTTTAATCCTTGAAGCTTTATTTTTTATTTTTTATTTTTATTTTTATTTTTTTTTTTCTCTCTCTTTCTCTTTTCAGAACGATCCTTGAAGCTTTTGCCATTAAATTCATGGATGGAAAAGTGTGTCTGCATATGTGTTGCTTTAATGAACAAATTTAAACACATGTGAGAAGTAAATTTGGAGGTTAGGGTTAGCCAAAAAATCATGAAAAAAAGAACAGACAATTGAGGGCTTGGGGTTGACATGAGGAAAATGACAACAGATTTGGTCTACAAATGCGCCATGTGTTTATTGATTTTTCCATGTATGTATTTAGATTTGTTCACTTAAGTAGGTACAAACTTTTTTTTTTCTATGAACTTAGTGACTAAAGCCTATAAAGATTGTTTTGAAACAAACTTCAAATTTGAAACTTTTAAAAGTTTTTGAGGGTATAACTAAAACCATAACCCTATAGTTCAGTTGTATTTTTGATAGTTTAACCCTTATTTATTTATTTATTTATTTATTATTATTATTATTATTATTATTGTTTGTGTTAACAATAACCAAACTTTCAATAGGAAGAACCTCAGAACAAAAACGCATGTTCAACATACACTAAATGTGAAGTTTGGTTTTTTGAGATTCTTTTAATTTCTTATTATATTGTTTTTCATTGTCTGCGTCTAACTTATTTTTCATCTTGAATTTTCTTCTTCAGGAAAGTTATAGGACAGTAACAAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAACGTACAACAGTGCTTTGAAGAACTTGTTTTGAAGGTAAACAATATCAGTTTAGTACTACTTTTGGTTCATTTGTTGGTCAAAGGATTTATATTGATTGGTAACTAACAGGCACATGGTGTTTCCTGTTGTAACAATCACATTTCTTATGTTTTTCAAAAGGTAAAAGCTGTCACATTCCTGGTAGATTCATAAATAGGTTAAAACATCTAGTGAGTGGCTAGGCATTGGAAAAAAATTCATGTTTTAACAATGCTAAAACTTTCCTCTTCTTTTTCCCCTCATTTTAAAATTTAGAAATAACCTGCGAAGTCAATGAATGTGGCACATGGTAATAACGATTCTAATATGCAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGCCTGATGCATCCACGAGCACTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTATTTTCTAAATTATTGTAAAACTATAGTAGAGAAGCATGGTGTTACAGCTTTTATTATGTCTCTCTCTCCCAACTTACCTTACAAATTGAAAGGGCGGTCGTGTCTTCTTGCTGTATTTCTTGTACAGGGAAAAGTTGAAATGGAAATATAAGATGCATGATTTCACTGTC

mRNA sequence

CACCAACTCACACAACCTTGCAATTTAGTAAAAATGAAGATCCGTTGAATTGTACAGTTAAAATGAAGCTTTTTTGTGGCTGTCTTACCAATCAATCCATCGGCTGAGTTGACTCCCGAGTTAAGGCCGACCTCGGTAGAGGACTCGGCATTTTCATTTTCAATTCCCTTTTCAAATTCTATAACCTTCGCCACCACGAACAATTGATACGAAACCAATATCAGGGACTTCTTCAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCCTCTTCATTGGACGCGCCATCAATTTTACAGCATTTGGGTACGTAAATCGGAAAGCGATCTTATTTTTGAAAATTGTTGATTGGGTTGGAGCCATTGGAGGACGGATTTGATGGATTCGACGTCGAATCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCGGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACATCCGACAGCTTCGAGGATCTCTCACCAACAATCGGTGTGGATTTTAAAGTAAAGTATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACAGACAAATGCAACATGAATGAACTCTGCACGTTCATGTATACAGCTTTGTTGAACCTGCAGCGTGCTAGAGCTTTTTCATTGAATGCTGGGCAGGAGAGATTCAGAACATTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGGTGCGTTCTATTCCCTTCTTTATTTGATTGTTTTGAAGGGAAGAAATTCTCGGCTTAGTATAAATATTCAATATCTTAGATGTGTTCAGTTTAAACGTGTTCATGATTTTATCAAATGGTCAACCGTGTCAGTTTATGATGTAACAAGGAGAGAGACATTTACAAACCTGTCTGAGGTATGGGCGAGGGAAATAGATCTATATTCGACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACAAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAACGTACAACAGTGCTTTGAAGAACTTGTTTTGAAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGCCTGATGCATCCACGAGCACTTGTTGCTGAAATTGATTCATTGTCTCTAACTACATTTGCTGGTTATTTTCTAAATTATTGTAAAACTATAGTAGAGAAGCATGGTGTTACAGCTTTTATTATGTCTCTCTCTCCCAACTTACCTTACAAATTGAAAGGGCGGTCGTGTCTTCTTGCTGTATTTCTTGTACAGGGAAAAGTTGAAATGGAAATATAAGATGCATGATTTCACTGTC

Coding sequence (CDS)

ATGGATTCGACGTCGAATCAAACCGAGTTTGATTACTTGTTCAAATTGTTGATGATTGGGGACTCGGGGGTTGGAAAAAGTAGTCTGCTTTTAAGTTTCACATCCGACAGCTTCGAGGATCTCTCACCAACAATCGGTGTGGATTTTAAAGTAAAGTATGTTACTGCTGGGGGTAAAAAGCTGAAGCTTGCAATTTGGGATACAGACAAATGCAACATGAATGAACTCTGCACGTTCATGTATACAGCTTTGTTGAACCTGCAGCGTGCTAGAGCTTTTTCATTGAATGCTGGGCAGGAGAGATTCAGAACATTGACTAGTTCATACTACAGAGGTGCTCAAGGGATCATTATGGGTGCGTTCTATTCCCTTCTTTATTTGATTGTTTTGAAGGGAAGAAATTCTCGGCTTAGTATAAATATTCAATATCTTAGATGTGTTCAGTTTAAACGTGTTCATGATTTTATCAAATGGTCAACCGTGTCAGTTTATGATGTAACAAGGAGAGAGACATTTACAAACCTGTCTGAGGTATGGGCGAGGGAAATAGATCTATATTCGACAAATCAAGATTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAAAGTTATAGGACAGTAACAAAGAAAGAGGGAATTGACATGGCTAGGGAATATGGTTGTCTTTTTATAGAATGCAGTGCCAAAACTCGAGTTAACGTACAACAGTGCTTTGAAGAACTTGTTTTGAAGATTCTTGATACGCCCAGCCTTTTATCTGAAGGCTCTAAAGGAGTGAGAAGGAACATCTTCAAGGAAAAGCCTCCACAGCCTGATGCATCCACGAGCACTTGTTGCTGA

Protein sequence

MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKKLKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGAFYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWAREIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC

Homology

[Close]

BLAST of ClCG02G000460 vs. NCBI nr
Match: XP_038901438.1 (ras-related protein RABC1-like [Benincasa hispida])

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-101
Identity = 206/281 (73.31%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFT+DSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTTDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           REIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF
Sbjct: 181 REIDLYSTNQDCIKMLVGNKVDKESFRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTS+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of ClCG02G000460 vs. NCBI nr
Match: XP_022156664.1 (ras-related protein RABC1-like [Momordica charantia])

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-101
Identity = 205/281 (72.95%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTS+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of ClCG02G000460 vs. NCBI nr
Match: XP_004147350.1 (ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa_016939 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 6.6e-100
Identity = 203/281 (72.24%), Postives = 207/281 (73.67%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DASTS+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of ClCG02G000460 vs. NCBI nr
Match: XP_008460888.1 (PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-related protein RABC1-like [Cucumis melo var. makuwa] >TYK02071.1 ras-related protein RABC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 372.5 bits (955), Expect = 3.3e-99
Identity = 202/281 (71.89%), Postives = 206/281 (73.31%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DAS S+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of ClCG02G000460 vs. NCBI nr
Match: KAG6605327.1 (Ras-related protein RABC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 4.3e-99
Identity = 200/281 (71.17%), Postives = 216/281 (76.87%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQ EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQIEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT    +  + +F++        +R F  +AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDTVLSIIKMIWSFLFI-------SRDF-FDAGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNL+EVWA
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLTEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           REIDLYSTN +CIKMLVGNKVDKESYRTVTKKEGI++ARE+GCLFIECSAKTRVNVQQCF
Sbjct: 181 REIDLYSTNPECIKMLVGNKVDKESYRTVTKKEGIELAREHGCLFIECSAKTRVNVQQCF 229

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKIL+TPSLLSEGSKGVR+NIFKE+PPQ DASTS+CC
Sbjct: 241 EELVLKILETPSLLSEGSKGVRKNIFKERPPQLDASTSSCC 229

[Close]

BLAST of ClCG02G000460 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.2e-85
Identity = 170/281 (60.50%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLS++WA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSDIWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++S+ C
Sbjct: 241 EELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of ClCG02G000460 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-71
Identity = 145/281 (51.60%), Postives = 177/281 (62.99%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKL IWDT                            AGQERFRTLTSSYYRGAQGII+  
Sbjct: 61  LKLTIWDT----------------------------AGQERFRTLTSSYYRGAQGIIL-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNL +VW 
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLVDVWG 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EI+LYSTNQ+C++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCF
Sbjct: 181 KEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EEL LKI++ PSLL EGS  V+RNI K+KP     + S CC
Sbjct: 241 EELALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of ClCG02G000460 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-62
Identity = 135/281 (48.04%), Postives = 166/281 (59.07%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKL IWDT                            AGQE+FRTLTSSY+RG+QGII+  
Sbjct: 61  LKLTIWDT----------------------------AGQEKFRTLTSSYFRGSQGIIL-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVT+RETF NL+++WA
Sbjct: 121 ------------------------------------------VYDVTKRETFLNLADIWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EI+LYSTN DCIKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CF
Sbjct: 181 KEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCF 203

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EEL LKI++ PSLL EGS  V+R       P   A    CC
Sbjct: 241 EELALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of ClCG02G000460 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.7e-48
Identity = 115/251 (45.82%), Postives = 137/251 (54.58%), Query Frame = 0


Query: 11  DYLFKLLMIGDSGVGKSSLLLSFTSDSFED-LSPTIGVDFKVKYVTAGGKKLKLAIWDTD 70
           DY FK+L++GDSGVGKS +L  FTS  FE+  + TIGVDFKVKY+TA GK+ KL IWDT 
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDT- 66

Query: 71  KCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGAFYSLLYLIV 130
                                      AGQERFRTLTSSYYRGAQGII            
Sbjct: 67  ---------------------------AGQERFRTLTSSYYRGAQGIIF----------- 126

Query: 131 LKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWAREIDLYSTN 190
                                            VYDVTRR+TF +L   W RE D+YST 
Sbjct: 127 ---------------------------------VYDVTRRDTFESLEANWMREFDIYSTV 185

Query: 191 QDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILD 250
           +  IKM+V NKVD  + R V+ +EG D AR +GCLF+E SA+  + V Q FEEL+LKILD
Sbjct: 187 ESAIKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILD 185

Query: 251 TPSLLSEGSKG 261
           TP LL   + G
Sbjct: 247 TPLLLETTAVG 185

[Close]

BLAST of ClCG02G000460 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-42
Identity = 111/267 (41.57%), Postives = 138/267 (51.69%), Query Frame = 0


Query: 15  KLLMIGDSGVGKSSLLLSFTSDSFE-DLSPTIGVDFKVKYVTAGGKKLKLAIWDTDKCNM 74
           K+L+IG+SGVGKSSLLL FT D+F+ +L+ TIGVDFKVK +   G + KLAIWDT     
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDT----- 69

Query: 75  NELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGAFYSLLYLIVLKGR 134
                                  AGQERFRTLT SYYRGAQG+I+               
Sbjct: 70  -----------------------AGQERFRTLTPSYYRGAQGVIL--------------- 129

Query: 135 NSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWAREIDLYSTNQDCI 194
                                        VYDVT+R+TFT L E W  E++ Y T  D +
Sbjct: 130 -----------------------------VYDVTKRDTFTKL-ENWLNELETYCTRNDLV 189

Query: 195 KMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL 254
           KMLVGNK+DK++ R V + EG+  AR++  LFIE SAKTR  VQ  FEELV KIL TP L
Sbjct: 190 KMLVGNKIDKDN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGL 202

Query: 255 LSEGSKGVRRNIFKEKPPQPDASTSTC 281
                +     +   +P +  A    C
Sbjct: 250 WESSIQNHGVQLSDNEPQRQGACGGYC 202

[Close]

BLAST of ClCG02G000460 vs. ExPASy TrEMBL
Match: A0A6J1DU73 (ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.7e-101
Identity = 205/281 (72.95%), Postives = 209/281 (74.38%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDS+SNQ+EFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSSSNQSEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTS+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSSCC 209

[Close]

BLAST of ClCG02G000460 vs. ExPASy TrEMBL
Match: A0A0A0LQC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 3.2e-100
Identity = 203/281 (72.24%), Postives = 207/281 (73.67%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLF ECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DASTS+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASTSSCC 209

[Close]

BLAST of ClCG02G000460 vs. ExPASy TrEMBL
Match: A0A5D3BQN6 (Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00560 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.6e-99
Identity = 202/281 (71.89%), Postives = 206/281 (73.31%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DAS S+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of ClCG02G000460 vs. ExPASy TrEMBL
Match: A0A1S3CDH6 (ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.6e-99
Identity = 202/281 (71.89%), Postives = 206/281 (73.31%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSD+FEDLSPTIGVDFKVKYVTAGGKK
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTN DCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNPDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQ DAS S+CC
Sbjct: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQSDASASSCC 209

[Close]

BLAST of ClCG02G000460 vs. ExPASy TrEMBL
Match: A0A6J1I7F2 (ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.3e-98
Identity = 200/281 (71.17%), Postives = 206/281 (73.31%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGK+
Sbjct: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKR 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNLSEVWA
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLSEVWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKES+RTVTKKEGIDMARE GCLF ECSAKTRVNVQQCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESFRTVTKKEGIDMARECGCLFTECSAKTRVNVQQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKIL+TPSLLSEGSKGVR+NIFKEKPPQPDAS S+CC
Sbjct: 241 EELVLKILETPSLLSEGSKGVRKNIFKEKPPQPDASASSCC 209

[Close]

BLAST of ClCG02G000460 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 315.5 bits (807), Expect = 4.4e-86
Identity = 170/281 (60.50%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLS++WA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSDIWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++S+ C
Sbjct: 241 EELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of ClCG02G000460 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 315.5 bits (807), Expect = 4.4e-86
Identity = 170/281 (60.50%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLS++WA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSDIWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++S+ C
Sbjct: 241 EELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of ClCG02G000460 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 315.5 bits (807), Expect = 4.4e-86
Identity = 170/281 (60.50%), Postives = 193/281 (68.68%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q EFDYLFK+L+IGDSGVGKSSLLLSFTS++F+DLSPTIGVDFKVKY+T G KK
Sbjct: 1   MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKLAIWDT                            AGQERFRTLTSSYYRGAQGIIM  
Sbjct: 61  LKLAIWDT----------------------------AGQERFRTLTSSYYRGAQGIIM-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRR+TFTNLS++WA
Sbjct: 121 ------------------------------------------VYDVTRRDTFTNLSDIWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EIDLYSTNQDCIKMLVGNKVDKES R V+KKEGID AREYGCLF+ECSAKTRVNV+QCF
Sbjct: 181 KEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EELVLKIL+TPSL +EGS G ++NIFK+ P Q  +++S+ C
Sbjct: 241 EELVLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of ClCG02G000460 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 271.2 bits (692), Expect = 9.6e-73
Identity = 145/281 (51.60%), Postives = 177/281 (62.99%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLL+SF S S EDL+PTIGVDFK+K +T GGK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKL IWDT                            AGQERFRTLTSSYYRGAQGII+  
Sbjct: 61  LKLTIWDT----------------------------AGQERFRTLTSSYYRGAQGIIL-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVTRRETFTNL +VW 
Sbjct: 121 ------------------------------------------VYDVTRRETFTNLVDVWG 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EI+LYSTNQ+C++MLVGNKVD+ES R V+++EGI +A+E  C+F+ECSA+TR NV+QCF
Sbjct: 181 KEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCF 209

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EEL LKI++ PSLL EGS  V+RNI K+KP     + S CC
Sbjct: 241 EELALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of ClCG02G000460 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-63
Identity = 135/281 (48.04%), Postives = 166/281 (59.07%), Query Frame = 0


Query: 1   MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDSFEDLSPTIGVDFKVKYVTAGGKK 60
           M S+S Q+ +D  FK+L+IGDSGVGKSSLLLSF S S EDL+PTIGVDFK+K +   GK+
Sbjct: 1   MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60

Query: 61  LKLAIWDTDKCNMNELCTFMYTALLNLQRARAFSLNAGQERFRTLTSSYYRGAQGIIMGA 120
           LKL IWDT                            AGQE+FRTLTSSY+RG+QGII+  
Sbjct: 61  LKLTIWDT----------------------------AGQEKFRTLTSSYFRGSQGIIL-- 120

Query: 121 FYSLLYLIVLKGRNSRLSINIQYLRCVQFKRVHDFIKWSTVSVYDVTRRETFTNLSEVWA 180
                                                     VYDVT+RETF NL+++WA
Sbjct: 121 ------------------------------------------VYDVTKRETFLNLADIWA 180

Query: 181 REIDLYSTNQDCIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFIECSAKTRVNVQQCF 240
           +EI+LYSTN DCIKMLVGNKVD+ES R V+++EG+ +A++  CLF ECSA+TR NV  CF
Sbjct: 181 KEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCF 203

Query: 241 EELVLKILDTPSLLSEGSKGVRRNIFKEKPPQPDASTSTCC 282
           EEL LKI++ PSLL EGS  V+R       P   A    CC
Sbjct: 241 EELALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

The following BLAST results are available for this feature:

BLAST of ClCG02G000460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901438.1	1.2e-101	73.31	ras-related protein RABC1-like [Benincasa hispida]	[more]
XP_022156664.1	3.5e-101	72.95	ras-related protein RABC1-like [Momordica charantia]	[more]
XP_004147350.1	6.6e-100	72.24	ras-related protein RABC1 [Cucumis sativus] >KGN62201.1 hypothetical protein Csa...	[more]
XP_008460888.1	3.3e-99	71.89	PREDICTED: ras-related protein RABC1-like [Cucumis melo] >KAA0040756.1 ras-relat...	[more]
KAG6605327.1	4.3e-99	71.17	Ras-related protein RABC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of ClCG02G000460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	6.2e-85	60.50	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	1.3e-71	51.60	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	1.5e-62	48.04	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	4.7e-48	45.82	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	2.2e-42	41.57	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of ClCG02G000460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU73	1.7e-101	72.95	ras-related protein RABC1-like OS=Momordica charantia OX=3673 GN=LOC111023514 PE...	[more]
A0A0A0LQC6	3.2e-100	72.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G334520 PE=4 SV=1	[more]
A0A5D3BQN6	1.6e-99	71.89	Ras-related protein RABC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CDH6	1.6e-99	71.89	ras-related protein RABC1-like OS=Cucumis melo OX=3656 GN=LOC103499629 PE=4 SV=1	[more]
A0A6J1I7F2	1.3e-98	71.17	ras-related protein RABC1-like OS=Cucurbita maxima OX=3661 GN=LOC111470311 PE=4 ...	[more]

BLAST of ClCG02G000460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	4.4e-86	60.50	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	4.4e-86	60.50	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	4.4e-86	60.50	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	9.6e-73	51.60	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.1e-63	48.04	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 225..247 score: 41.29 coord: 190..203 score: 42.87 coord: 14..35 score: 52.76
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..250 e-value: 6.3E-10 score: 25.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..250 e-value: 4.1E-65 score: 232.3
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 161..281
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 161..281
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..70
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 1..70
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 96..118
None	No IPR available	PANTHER	PTHR24073:SF1000	SMALL MONOMERIC GTPASE-RELATED	coord: 96..118
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..248 score: 8.645014
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..281 score: 20.767033
None	No IPR available	CDD	cd01863	Rab18	coord: 14..247 e-value: 1.91141E-90 score: 263.403
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..250 e-value: 3.6E-7 score: -26.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..68 e-value: 1.0E-14 score: 54.4 coord: 161..248 e-value: 2.6E-20 score: 72.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..281 score: 12.097337
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..281 e-value: 5.2E-55 score: 187.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000460.2	ClCG02G000460.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding