ClCG01G024965 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G024965
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	LOB domain-containing protein
Location	CG_Chr01: 38009851 .. 38010333 (+)
RNA-Seq Expression	ClCG01G024965
Synteny	ClCG01G024965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTTGCCCCACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCAACGTCTCTAGGCTTCTCAATCAGTTGAGCTATAAGGAGCGAGATGAAGCCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAAAGATCCTGTGCATGGTTGCGTTGCCTTTATATCCATTCTTCAGAACAGGCTTAACGATCTTCAAACTCAACTCTCCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGGTGAATCGTCAAGTCAACGGCCAACGAAGGAGGATCAATTGCCGCCGCCGCCGCAAAATCACAAAAGGATAGAATACTGA

mRNA sequence

ATGAGTTGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTTGCCCCACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCAACGTCTCTAGGCTTCTCAATCAGTTGAGCTATAAGGAGCGAGATGAAGCCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAAAGATCCTGTGCATGGTTGCGTTGCCTTTATATCCATTCTTCAGAACAGGCTTAACGATCTTCAAACTCAACTCTCCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGGTGAATCGTCAAGTCAACGGCCAACGAAGGAGGATCAATTGCCGCCGCCGCCGCAAAATCACAAAAGGATAGAATACTGA

Coding sequence (CDS)

ATGAGTTGCTCCAATTCTCAATCCCAGAAGGTTCCGGTTCGTTATGGCTCACCATGTGCAGCATGTAAATTTCTAAGAAAAAAGTGTGTTCCGGATTGCATATTTGCCCCACATTTTCCAGCAGATCAGCCTAAAAAATTCGAAGCTGTACATACGATTTACGGCGCCAGCAACGTCTCTAGGCTTCTCAATCAGTTGAGCTATAAGGAGCGAGATGAAGCCGCCAAGTCTCTAATCTATGAGGCAGAGGCTTGGCAGAAAGATCCTGTGCATGGTTGCGTTGCCTTTATATCCATTCTTCAGAACAGGCTTAACGATCTTCAAACTCAACTCTCCATCGCTCGACGACAGCTTTCAACTTACATGCTAGAAGATGTAAATATTCTTCCGCCGAGGTGGCCAGGTGAATCGTCAAGTCAACGGCCAACGAAGGAGGATCAATTGCCGCCGCCGCCGCAAAATCACAAAAGGATAGAATACTGA

Protein sequence

MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGESSSQRPTKEDQLPPPPQNHKRIEY

Homology

[Close]

BLAST of ClCG01G024965 vs. NCBI nr
Match: XP_038881578.1 (protein ASYMMETRIC LEAVES 2-like [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.9e-52
Identity = 100/124 (80.65%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 2   SCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSR 61
           S S+SQSQK  + YGSPCAACKFLR+KC+PDCIFAPHFPADQPKKFEA+HTIYGASNVS+
Sbjct: 4   SNSHSQSQKPSINYGSPCAACKFLRRKCLPDCIFAPHFPADQPKKFEAIHTIYGASNVSK 63

Query: 62  LLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 121
           LLNQLSY ERD+AAKSLIYEAEAWQ+DPVHGCV FISILQ RLN+LQ +L+IARR+LSTY
Sbjct: 64  LLNQLSYDERDKAAKSLIYEAEAWQRDPVHGCVGFISILQKRLNELQIELAIARRELSTY 123

Query: 122 MLED 126
           ++ +
Sbjct: 124 IVSE 127

[Close]

BLAST of ClCG01G024965 vs. NCBI nr
Match: XP_008439580.1 (PREDICTED: LOB domain-containing protein 12-like [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 2.6e-40
Identity = 92/151 (60.93%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS
Sbjct: 1   MSSFNSQPQKT---YGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L  L Y ER+E   SL++EAEA  +DPV GCVA IS LQ+RL  LQT+LSIARR+LS+
Sbjct: 61  KILKALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSS 120

Query: 121 YMLEDV---------NILPPRWPGESSSQRP 143
           YM  ++         + LPP W   +S  RP
Sbjct: 121 YMPSELPPNYSSYMASKLPPNWSYMASKLRP 148

[Close]

BLAST of ClCG01G024965 vs. NCBI nr
Match: KAA0052511.1 (LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa])

HSP 1 Score: 176.0 bits (445), Expect = 2.6e-40
Identity = 92/151 (60.93%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS
Sbjct: 1   MSSFNSQPQKT---YGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L  L Y ER+E   SL++EAEA  +DPV GCVA IS LQ+RL  LQT+LSIARR+LS+
Sbjct: 61  KILKALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSS 120

Query: 121 YMLEDV---------NILPPRWPGESSSQRP 143
           YM  ++         + LPP W   +S  RP
Sbjct: 121 YMPSELPPNYSSYMASKLPPNWSCMASKLRP 148

[Close]

BLAST of ClCG01G024965 vs. NCBI nr
Match: XP_004134907.3 (protein LATERAL ORGAN BOUNDARIES [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-38
Identity = 90/153 (58.82%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGASNVS
Sbjct: 1   MSSSNSQSQKI---YGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L    Y ER+E  KSL++EAEA  +DPVHGCVAFI+ LQ RL  LQT+L+I ++QL +
Sbjct: 61  KILKASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLS 120

Query: 121 YMLEDVNILPPRWPGESSSQRPTKE---DQLPP 151
           YM      LPP     +S   P       +LPP
Sbjct: 121 YMASQ---LPPNSSYMASELPPNSSYMASELPP 147

[Close]

BLAST of ClCG01G024965 vs. NCBI nr
Match: KAE8647756.1 (hypothetical protein Csa_003034 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 5.3e-38
Identity = 90/153 (58.82%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGASNVS
Sbjct: 1   MSSSNSQSQKI---YGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L    Y ER+E  KSL++EAEA  +DPVHGCVAFI+ LQ RL  LQT+L+I ++QL +
Sbjct: 61  KILKASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLS 120

Query: 121 YMLEDVNILPPRWPGESSSQRPTKE---DQLPP 151
           YM      LPP     +S   P       +LPP
Sbjct: 121 YMASQ---LPPNSSYMASELPPNSSYMASELPP 147

[Close]

BLAST of ClCG01G024965 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-31
Identity = 61/105 (58.10%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
           SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ +LS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of ClCG01G024965 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-31
Identity = 63/106 (59.43%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 16  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAA 75
           GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GASNV++LLN+L   +R++A 
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 76  KSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
            SL YEA+   +DPV+GCVA ISILQ  L  LQ  L+ A+ +LS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of ClCG01G024965 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-31
Identity = 63/106 (59.43%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 16  GSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAA 75
           GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GASNV++LLN+L   +R++A 
Sbjct: 36  GSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAV 95

Query: 76  KSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
            SL YEA+   +DPV+GCVA ISILQ  L  LQ  L+ A+ +LS Y
Sbjct: 96  NSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKY 141

[Close]

BLAST of ClCG01G024965 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.3e-31
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH ++GASNV++LLN+L+  +R++A  
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGE 136
           SL YEAEA  +DPV+GCV  ISILQ+RL  +   L  A+++L+TY+     +LP   P  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQA-MLPILQPHF 125

Query: 137 SSSQRPTKEDQLPPPPQ 154
            S         LPP PQ
Sbjct: 126 MS---------LPPQPQ 132

[Close]

BLAST of ClCG01G024965 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-31
Identity = 65/120 (54.17%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 2   SCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSR 61
           S S+S +       GSPCAACKFLR+KC PDC+FAP+FP D P+KF  VH ++GASNV++
Sbjct: 17  SSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTK 76

Query: 62  LLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 121
           LLN+L   +R++A  SL YEA+   +DPV+GCV  ISILQ+ L  LQ  L+ A+ +LS Y
Sbjct: 77  LLNELHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKY 136

[Close]

BLAST of ClCG01G024965 vs. ExPASy TrEMBL
Match: A0A0A0KIS2 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 7.3e-41
Identity = 95/167 (56.89%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS SNSQSQK+   YGSPCA+CKFLR+KC  DCIFAP+FPADQP+KFE VH IYGASNVS
Sbjct: 1   MSSSNSQSQKI---YGSPCASCKFLRRKCDVDCIFAPYFPADQPQKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L    Y ER+E  KSL++EAEA  +DPVHGCVAFI+ LQ RL  LQT+L+I ++QL +
Sbjct: 61  KILKASRYDEREETVKSLVFEAEARLEDPVHGCVAFIAGLQQRLQRLQTELAIVQQQLLS 120

Query: 121 YMLED-------------------VNILPPRWPGESS-SQRPTKEDQ 148
           YM                      ++ L P+WP ESS SQ+P  EDQ
Sbjct: 121 YMASQLPPNSSYMASELPPNSSYMLSELLPKWPRESSLSQQPMMEDQ 164

[Close]

BLAST of ClCG01G024965 vs. ExPASy TrEMBL
Match: A0A5D3CQL4 (LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009370 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 92/151 (60.93%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS
Sbjct: 1   MSSFNSQPQKT---YGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L  L Y ER+E   SL++EAEA  +DPV GCVA IS LQ+RL  LQT+LSIARR+LS+
Sbjct: 61  KILKALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSS 120

Query: 121 YMLEDV---------NILPPRWPGESSSQRP 143
           YM  ++         + LPP W   +S  RP
Sbjct: 121 YMPSELPPNYSSYMASKLPPNWSCMASKLRP 148

[Close]

BLAST of ClCG01G024965 vs. ExPASy TrEMBL
Match: A0A1S3AYN9 (LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40
Identity = 92/151 (60.93%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MSCSNSQSQKVPVRYGSPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVS 60
           MS  NSQ QK    YGSPCA+CKFLR+KC  DCIFAPHFPADQPKKFE VH IYGASNVS
Sbjct: 1   MSSFNSQPQKT---YGSPCASCKFLRRKCDADCIFAPHFPADQPKKFEVVHRIYGASNVS 60

Query: 61  RLLNQLSYKERDEAAKSLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLST 120
           ++L  L Y ER+E   SL++EAEA  +DPV GCVA IS LQ+RL  LQT+LSIARR+LS+
Sbjct: 61  KILKALRYDEREETVNSLVFEAEARLRDPVRGCVALISDLQDRLQMLQTELSIARRELSS 120

Query: 121 YMLEDV---------NILPPRWPGESSSQRP 143
           YM  ++         + LPP W   +S  RP
Sbjct: 121 YMPSELPPNYSSYMASKLPPNWSYMASKLRP 148

[Close]

BLAST of ClCG01G024965 vs. ExPASy TrEMBL
Match: A0A2P5DEA8 (Lateral organ boundaries domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_070900 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.8e-32
Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH +YGASNV++LLN+L+   R+EA  
Sbjct: 8   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFACVHRVYGASNVAKLLNELATAHREEAVV 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTYMLEDVNILP 131
           SL YEAEA  +DPV+GCV FIS+L NRL  +QT+L+ A+++L+ Y+     ++P
Sbjct: 68  SLAYEAEARLRDPVYGCVGFISVLHNRLKQVQTELNAAKKELAAYIGPQAMLIP 121

[Close]

BLAST of ClCG01G024965 vs. ExPASy TrEMBL
Match: A0A2P5EQE7 (Lateral organ boundaries domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_164780 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.8e-32
Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH +YGASNV++LLN+L+   R+EA  
Sbjct: 8   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFACVHRVYGASNVAKLLNELATAHREEAVV 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTYMLEDVNILP 131
           SL YEAEA  +DPV+GCV FIS+L NRL  +QT+L+ A+++L+ Y+     ++P
Sbjct: 68  SLAYEAEARLRDPVYGCVGFISVLHNRLKQVQTELNAAKKELAAYIGPQAMLIP 121

[Close]

BLAST of ClCG01G024965 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 61/105 (58.10%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
           SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ +LS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of ClCG01G024965 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 61/105 (58.10%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
           SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ +LS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of ClCG01G024965 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 61/105 (58.10%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
           SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ +LS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of ClCG01G024965 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 61/105 (58.10%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC P+C+FAP+FP DQP+KF  VH ++GASNV++LLN+L   +R++A  
Sbjct: 8   SPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVN 67

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTY 122
           SL YEA+   +DPV+GCV  IS+LQ++L  LQ  LS A+ +LS Y
Sbjct: 68  SLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY 112

[Close]

BLAST of ClCG01G024965 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32
Identity = 70/137 (51.09%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 17  SPCAACKFLRKKCVPDCIFAPHFPADQPKKFEAVHTIYGASNVSRLLNQLSYKERDEAAK 76
           SPCAACKFLR+KC  +C+FAP+FP DQP+KF  VH ++GASNV++LLN+L+  +R++A  
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 77  SLIYEAEAWQKDPVHGCVAFISILQNRLNDLQTQLSIARRQLSTYMLEDVNILPPRWPGE 136
           SL YEAEA  +DPV+GCV  ISILQ+RL  +   L  A+++L+TY+     +LP   P  
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQA-MLPILQPHF 125

Query: 137 SSSQRPTKEDQLPPPPQ 154
            S         LPP PQ
Sbjct: 126 MS---------LPPQPQ 132

The following BLAST results are available for this feature:

BLAST of ClCG01G024965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881578.1	2.9e-52	80.65	protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]	[more]
XP_008439580.1	2.6e-40	60.93	PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]	[more]
KAA0052511.1	2.6e-40	60.93	LOB domain-containing protein 12-like [Cucumis melo var. makuwa] >TYK13314.1 LOB...	[more]
XP_004134907.3	5.3e-38	58.82	protein LATERAL ORGAN BOUNDARIES [Cucumis sativus]	[more]
KAE8647756.1	5.3e-38	58.82	hypothetical protein Csa_003034 [Cucumis sativus]	[more]

BLAST of ClCG01G024965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04479	1.7e-31	58.10	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
A2WXT0	1.7e-31	59.43	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	1.7e-31	59.43	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]
Q9FKZ3	2.3e-31	51.09	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]
Q32SG3	2.9e-31	54.17	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]

BLAST of ClCG01G024965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIS2	7.3e-41	56.89	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525240 PE=3 SV...	[more]
A0A5D3CQL4	1.2e-40	60.93	LOB domain-containing protein 12-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AYN9	1.2e-40	60.93	LOB domain-containing protein 12-like OS=Cucumis melo OX=3656 GN=LOC103484334 PE...	[more]
A0A2P5DEA8	2.8e-32	57.02	Lateral organ boundaries domain containing protein OS=Parasponia andersonii OX=3...	[more]
A0A2P5EQE7	2.8e-32	57.02	Lateral organ boundaries domain containing protein OS=Trema orientale OX=63057 G...	[more]

BLAST of ClCG01G024965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65620.1	1.2e-32	58.10	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	1.2e-32	58.10	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	1.2e-32	58.10	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	1.2e-32	58.10	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G66870.1	1.6e-32	51.09	ASYMMETRIC LEAVES 2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 97..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..160
None	No IPR available	PANTHER	PTHR31301:SF68	LOB DOMAIN-CONTAINING PROTEIN 32-RELATED	coord: 16..135
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 16..135
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 18..114 e-value: 1.8E-38 score: 131.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 17..118 score: 25.047737

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G024965.1	ClCG01G024965.1	mRNA