ClCG01G016445 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG01G016445
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Integrase catalytic domain-containing protein
Location	CG_Chr01: 30818068 .. 30821010 (-)
RNA-Seq Expression	ClCG01G016445
Synteny	ClCG01G016445

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGAAACTAAGGTATCTACCGCCAAAGTCATCGACAATCGGACCCATCCCAACAACCCCACGGTCCAAATCACCACCATTTGACTTAACGGGGAAAATTTTCTTTGTTGGTCCCAGAGTGTTCGGATGTATATTCGTGGTCAAGGTAAGATAGGGTACCTCACAGGAGAAAAAATCGCTCATAGTCCATAGGACCCCTTATTCACTGTGTGGGATGCAGAAAACTCCATGGTTATGACGTGGCTTATCAACTCTATGGTAGAAGACATCAACAGTAACTACATGTGCTACACTACGGCCAAGGAATTATGGGATAGTGTGACCCAAATGTACTCTGATTTGGGGAACCAATCACAAGTGTTCGAGCTAAACCTTAAGTTGGGTGATATGCGACAAGGAGGCAATTCAGTTACACAATATTTTCACTCTCTGAAAAGGATATGGCAAGAACTTGATCTGTTTGAGACGTATGAGTGGAAATCCACAAACGACCAAAAACATTATCGGAAAACTGTTGATGATGGTCGCATTTACAAATTTCTTGTTGGCCTCAATGTTGAGTTTGATGAGGTTAGAGGCAGGATACTTGGGAAAAGTATTCTTCCAAATCTTAATGATGTTTTTTCTAAAGTTCGCAGGGAAGAAAGCCGCAGGAATGTTATGATTGGGAAAAAGGCAGTTGACTCAGTGGACAGTTCTGCACTAGTGACTGAAAGTACTGCAATGAAAGCTTCTGATCAATCCAACAAAACTCATGACAAGCCCCATGTATGGTGTGATCATTGCAACAAACCCTGTCATACGAGGGAAACTTGTTGGAAACTACATGGCAAACCTCCAAATTGGAAGAGTTCGAAACAATATGAGAGATATTCTCATCAGCATGCCTCCAATGCAAATGTTGTTGATTCCAGTCCACTCAAAGAGCAAATTGATCAAATCCTGAAGCTGCTAAAATCCAATTATACGGGTAATCCTAGTGTTTCCTTGGCACAAACAGGTAATTACCCTCAAGCTCTCTCGTGTCTAAATTCCTCTCCGTGGATCATTGATTCCGGAGCTACTGATCACATGACTAGTTTCTCGTGTTTATTTGATTCATACTCCCCTGTTTATAGTAAAGAAAAGTCTGTATTGCCGATGGTAGTGTTACATCTATTGCAGGCAAAGGAACAATTTCCCTAAGTACAAAACTCATACTACGTTCTGTTCTTCATGTTCTCAATTAGCTTGTAATTTATTATCTGTGAGCAAAATATCTAAGGATGCTAACTATCGTGTTATCTTTTGTGAAACCCATTGTCTCTTTCAGGATCAGGATTCGGGAGAGACGATTGGACGTGCTAGGATGATTGATGGTCTCTATTACTTTGATGAAGTTTCAACTAGTCATAAAAAGATTCAGGGCTTGAGTAGTGTCAGTTCTCTTCCTGTTCAAGAAACTATTATGTTTTGGCATCGTAGATTAGGACATCCTAATTTCGTTTATTTAAAACATTTGTTTCCTGGTTTATTTAAAGGAATTGATTGTTCTGTGTTTCAATGTGAAGATTGCAAACATCATCGATCTACGTTTTTACCCAAATCCTATAAACCCTCATCACCCTTTTACTTAATTCATACTGATGTTTGGGGGCCATCTAAGGTTTTGACTAAAAATGGCAAGCGCTGGTTTGTTACTTTTATCAATGATCACACCCGTTTAACTTGGCTTTACTTAATCACAAAAAAGACGGATGTAAAAGAGGTCTTTGTTCGTTTTCATAAAAGGATTGAGACTCAATTTCAAACTAAAATTCGCATTCTTCACTCTGATAATGGGACTGAATTTTTTAACGAACCACAAACCACCTTTTTACATGACAAGGGCATTATTCACCAAGCGACATGTCGCGATACCCCTCAGCAAAATGGTGTTGCTGAACGGAAAAATCGACACTTGCTTGAAATTGCTCGTGCCCTCATGTTTTCGATGCATGTTCCAAAATATCTGTTGGGGGATGCAGTCCTAACAGCTGCTTACCTAATCAATAGAATGCCTACTAAGGTGTTGAATTTTAAAACCCCTCTACAACACCTAAAAGATTTTTTTCCTACTATCCGATTGTTCTCAGAGTTACCTTTAAAAATTTTTGGTTGTACTGCTTATGTTCATCAAACCCTTTTTTCCCAATCCAAATTGGACCCTCGAGCTATCAAATGTTTTGACCCCCTCACTAACAAGTATTTTGAAAGTATGGATGTGGAAAATCAATCGTTTTTTAACCCAACTTCTCTTCAGGGGGAGTCATCATCTCTACTTGAGAATTTTTGGGACACTTCACTTCTCCCAAACATCATTAGTCCTGTAGGAGCTCTAGTCCTTCGATCTCAAGCATGGAAAACTCTTCGACAGGGGGAGAAACACTACAAACAGATCTGACAGGTCGAGATCCTGAACTTAAGTTTTATACTAGAAGAAACAGAACTCAAAGGGGTAGAAATCAGACAGTCGAACTAACACAGGACCAATCTGATACTCCAGTAAATGGTCCTAAAAATTCGGGTATCTCTCTTAGTCCTTCCTCTCATAATACATTGCCTAATGTCTCTGATCTTGATATTCCAATTGCCCAGAGAAAAGGTTCCTGCCAATGTACAAAATATCTCATTGCGAACTATCTCTCCTATCATAGATTGTCTGATAATCATAAAGCTTTCACATCCAAAATAACCAACCTATTTCTTCCAAGGAATATACAAGAAGCTCTAAATGATTCGAATTGGAAATTAGCAGTGATAGAAGAGATGAATGCGCTGAAACATGGTACTTGGGACATAGTTGATCTACCAGAAGACAAGAAAGCAGTGGGATGTAAGTGGGTTTTCACGATAAAATGTAATGCGGATGGTAGTATCGAAAGGTACAAGGCCAGGCTAGTGGCTAAGGGATTCACCTAG

mRNA sequence

ATGTCCGAAACTAAGAGTGTTCGGATGTATATTCGTGGTCAAGAAAACTCCATGGTTATGACGTGGCTTATCAACTCTATGGTAGAAGACATCAACAGTAACTACATGTGCTACACTACGGCCAAGGAATTATGGGATAGTGTGACCCAAATGTACTCTGATTTGGGGAACCAATCACAAGTGTTCGAGCTAAACCTTAAGTTGGGTGATATGCGACAAGGAGGCAATTCAGTTACACAATATTTTCACTCTCTGAAAAGGATATGGCAAGAACTTGATCTGTTTGAGACGTATGAGTGGAAATCCACAAACGACCAAAAACATTATCGGAAAACTGTTGATGATGGTCGCATTTACAAATTTCTTGTTGGCCTCAATGTTGAGTTTGATGAGGTTAGAGGCAGGATACTTGGGAAAAGTATTCTTCCAAATCTTAATGATGTTTTTTCTAAAGTTCGCAGGGAAGAAAGCCGCAGGAATGTTATGATTGGGAAAAAGGCAGTTGACTCAGTGGACAGTTCTGCACTAGTGACTGAAAGTACTGCAATGAAAGCTTCTGATCAATCCAACAAAACTCATGACAAGCCCCATGTATGGTGTGATCATTGCAACAAACCCTGTCATACGAGGGAAACTTGTTGGAAACTACATGGCAAACCTCCAAATTGGAAGAGTTCGAAACAATATGAGAGATATTCTCATCAGCATGCCTCCAATGCAAATGTTGTTGATTCCAGTCCACTCAAAGAGCAAATTGATCAAATCCTGAAGCTGCTAAAATCCAATTATACGGGTAATCCTAGTGTTTCCTTGGCACAAACAGGTAATTACCCTCAAGCTCTCTCGTGTCTAAATTCCTCTCCGTGGATCATTGATTCCGGAGCTACTGATCACATGACTAGTTTCTCGTGTTTATTTGATTCATACTCCCCTGTTTATAGTAAAGAAAAGTCTGTATTGCCGATGGATCAGGATTCGGGAGAGACGATTGGACGTGCTAGGATGATTGATGGTCTCTATTACTTTGATGAAGTTTCAACTAGTCATAAAAAGATTCAGGGCTTGAGTAGTGTCAGTTCTCTTCCTGTTCAAGAAACTATTATGTTTTGGCATCGTAGATTAGGACATCCTAATTTCGTTTATTTAAAACATTTGTTTCCTGGTTTATTTAAAGGAATTGATTGTTCTGTGTTTCAATGTGAAGATTGCAAACATCATCGATCTACGTTTTTACCCAAATCCTATAAACCCTCATCACCCTTTTACTTAATTCATACTGATGTTTGGGGGCCATCTAAGGTTTTGACTAAAAATGGCAAGCGCTGGATTGAGACTCAATTTCAAACTAAAATTCGCATTCTTCACTCTGATAATGGGACTGAATTTTTTAACGAACCACAAACCACCTTTTTACATGACAAGGGCATTATTCACCAAGCGACATGTCGCGATACCCCTCAGCAAAATGGTGTTGCTGAACGGAAAAATCGACACTTGCTTGAAATTGCTCGTGCCCTCATGTTTTCGATGCATGTTCCAAAATATCTGTTGGGGGATGCAGTCCTAACAGCTGCTTACCTAATCAATAGAATGCCTACTAAGTCCTGTAGGAGCTCTAGTCCTTCGATCTCAAGCATGGAAAACTCTTCGACAGGGGGAGAAACACTACAAACAGATCTGACAGGTCGAGATCCTGAACTTAAGTTTTATACTAGAAGAAACAGAACTCAAAGGGGTAGAAATCAGACAGTCGAACTAACACAGGACCAATCTGATACTCCAGTAAATGGTCCTAAAAATTCGGGTATCTCTCTTAGTCCTTCCTCTCATAATACATTGCCTAATGTCTCTGATCTTGATATTCCAATTGCCCAGAGAAAAGGTTCCTGCCAATGTACAAAATATCTCATTGCGAACTATCTCTCCTATCATAGATTGTCTGATAATCATAAAGCTTTCACATCCAAAATAACCAACCTATTTCTTCCAAGGAATATACAAGAAGCTCTAAATGATTCGAATTGGAAATTAGCAGTGATAGAAGAGATGAATGCGCTGAAACATGGTACTTGGGACATAGTTGATCTACCAGAAGACAAGAAAGCAGTGGGATGTAAGTGGGTTTTCACGATAAAATGTAATGCGGATGGTAGTATCGAAAGGTACAAGGCCAGGCTAGTGGCTAAGGGATTCACCTAG

Coding sequence (CDS)

ATGTCCGAAACTAAGAGTGTTCGGATGTATATTCGTGGTCAAGAAAACTCCATGGTTATGACGTGGCTTATCAACTCTATGGTAGAAGACATCAACAGTAACTACATGTGCTACACTACGGCCAAGGAATTATGGGATAGTGTGACCCAAATGTACTCTGATTTGGGGAACCAATCACAAGTGTTCGAGCTAAACCTTAAGTTGGGTGATATGCGACAAGGAGGCAATTCAGTTACACAATATTTTCACTCTCTGAAAAGGATATGGCAAGAACTTGATCTGTTTGAGACGTATGAGTGGAAATCCACAAACGACCAAAAACATTATCGGAAAACTGTTGATGATGGTCGCATTTACAAATTTCTTGTTGGCCTCAATGTTGAGTTTGATGAGGTTAGAGGCAGGATACTTGGGAAAAGTATTCTTCCAAATCTTAATGATGTTTTTTCTAAAGTTCGCAGGGAAGAAAGCCGCAGGAATGTTATGATTGGGAAAAAGGCAGTTGACTCAGTGGACAGTTCTGCACTAGTGACTGAAAGTACTGCAATGAAAGCTTCTGATCAATCCAACAAAACTCATGACAAGCCCCATGTATGGTGTGATCATTGCAACAAACCCTGTCATACGAGGGAAACTTGTTGGAAACTACATGGCAAACCTCCAAATTGGAAGAGTTCGAAACAATATGAGAGATATTCTCATCAGCATGCCTCCAATGCAAATGTTGTTGATTCCAGTCCACTCAAAGAGCAAATTGATCAAATCCTGAAGCTGCTAAAATCCAATTATACGGGTAATCCTAGTGTTTCCTTGGCACAAACAGGTAATTACCCTCAAGCTCTCTCGTGTCTAAATTCCTCTCCGTGGATCATTGATTCCGGAGCTACTGATCACATGACTAGTTTCTCGTGTTTATTTGATTCATACTCCCCTGTTTATAGTAAAGAAAAGTCTGTATTGCCGATGGATCAGGATTCGGGAGAGACGATTGGACGTGCTAGGATGATTGATGGTCTCTATTACTTTGATGAAGTTTCAACTAGTCATAAAAAGATTCAGGGCTTGAGTAGTGTCAGTTCTCTTCCTGTTCAAGAAACTATTATGTTTTGGCATCGTAGATTAGGACATCCTAATTTCGTTTATTTAAAACATTTGTTTCCTGGTTTATTTAAAGGAATTGATTGTTCTGTGTTTCAATGTGAAGATTGCAAACATCATCGATCTACGTTTTTACCCAAATCCTATAAACCCTCATCACCCTTTTACTTAATTCATACTGATGTTTGGGGGCCATCTAAGGTTTTGACTAAAAATGGCAAGCGCTGGATTGAGACTCAATTTCAAACTAAAATTCGCATTCTTCACTCTGATAATGGGACTGAATTTTTTAACGAACCACAAACCACCTTTTTACATGACAAGGGCATTATTCACCAAGCGACATGTCGCGATACCCCTCAGCAAAATGGTGTTGCTGAACGGAAAAATCGACACTTGCTTGAAATTGCTCGTGCCCTCATGTTTTCGATGCATGTTCCAAAATATCTGTTGGGGGATGCAGTCCTAACAGCTGCTTACCTAATCAATAGAATGCCTACTAAGTCCTGTAGGAGCTCTAGTCCTTCGATCTCAAGCATGGAAAACTCTTCGACAGGGGGAGAAACACTACAAACAGATCTGACAGGTCGAGATCCTGAACTTAAGTTTTATACTAGAAGAAACAGAACTCAAAGGGGTAGAAATCAGACAGTCGAACTAACACAGGACCAATCTGATACTCCAGTAAATGGTCCTAAAAATTCGGGTATCTCTCTTAGTCCTTCCTCTCATAATACATTGCCTAATGTCTCTGATCTTGATATTCCAATTGCCCAGAGAAAAGGTTCCTGCCAATGTACAAAATATCTCATTGCGAACTATCTCTCCTATCATAGATTGTCTGATAATCATAAAGCTTTCACATCCAAAATAACCAACCTATTTCTTCCAAGGAATATACAAGAAGCTCTAAATGATTCGAATTGGAAATTAGCAGTGATAGAAGAGATGAATGCGCTGAAACATGGTACTTGGGACATAGTTGATCTACCAGAAGACAAGAAAGCAGTGGGATGTAAGTGGGTTTTCACGATAAAATGTAATGCGGATGGTAGTATCGAAAGGTACAAGGCCAGGCTAGTGGCTAAGGGATTCACCTAG

Protein sequence

MSETKSVRMYIRGQENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQGGNSVTQYFHSLKRIWQELDLFETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRGRILGKSILPNLNDVFSKVRREESRRNVMIGKKAVDSVDSSALVTESTAMKASDQSNKTHDKPHVWCDHCNKPCHTRETCWKLHGKPPNWKSSKQYERYSHQHASNANVVDSSPLKEQIDQILKLLKSNYTGNPSVSLAQTGNYPQALSCLNSSPWIIDSGATDHMTSFSCLFDSYSPVYSKEKSVLPMDQDSGETIGRARMIDGLYYFDEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKGIDCSVFQCEDCKHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRWIETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTKSCRSSSPSISSMENSSTGGETLQTDLTGRDPELKFYTRRNRTQRGRNQTVELTQDQSDTPVNGPKNSGISLSPSSHNTLPNVSDLDIPIAQRKGSCQCTKYLIANYLSYHRLSDNHKAFTSKITNLFLPRNIQEALNDSNWKLAVIEEMNALKHGTWDIVDLPEDKKAVGCKWVFTIKCNADGSIERYKARLVAKGFT

Homology

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BLAST of ClCG01G016445 vs. NCBI nr
Match: GAU39772.1 (hypothetical protein TSUD_220160 [Trifolium subterraneum])

HSP 1 Score: 723.8 bits (1867), Expect = 1.5e-204
Identity = 438/945 (46.35%), Postives = 542/945 (57.35%), Query Frame = 0


Query: 4   TKSVRMYIRGQ-------------------------ENSMVMTWLINSMVEDINSNYMCY 63
           ++SVRMY+RG+                         ENSMVMTWL+NSM E+I++NY+CY
Sbjct: 52  SRSVRMYLRGKGMIGYITGDKKQPDKKGAGFDTWDAENSMVMTWLVNSMTEEISANYLCY 111

Query: 64  TTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQGGNSVTQYFHSLKRIWQELDLFETY 123
            TAK+LWD+V+QMYSDL NQSQV+EL L+LG ++QG +SVT+YF+ LKRIWQ+LDLF+ Y
Sbjct: 112 DTAKDLWDNVSQMYSDLENQSQVYELTLQLGKIQQGEDSVTKYFNCLKRIWQDLDLFDEY 171

Query: 124 EWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRGRILGKSILPNLNDVFSKVRREESR 183
           EWKS  D KHY KTVD  R++KFL GLNVEFDEVRGRILG++ +P + +VF++VRREESR
Sbjct: 172 EWKSPEDCKHYMKTVDVSRVFKFLAGLNVEFDEVRGRILGRNPIPQIGEVFAEVRREESR 231

Query: 184 RNVMIGKKAVDS---VDSSALVTESTAMKASDQSNKTHDKPHVWCDHCNKPCHTRETCWK 243
           R VM+GKK V +   V+ SAL       K+        DK H++CD+C +  H RE C+K
Sbjct: 232 RQVMLGKKVVAAPTPVEGSALAVPQVNRKSFPNPRGGGDKNHLFCDYCGRNRHVREDCFK 291

Query: 244 LHGKPPNWKSSKQYERYSHQHASNANVVDSSPL-KEQIDQILKLLKSNYTGN-PSVSLAQ 303
           LHG+P N K+ K    + ++  ++AN   SSP  KEQ+D + KLL+SN + N P  ++AQ
Sbjct: 292 LHGRPNNGKAGK----FGNRPVASANEAGSSPFTKEQLDHLFKLLRSNSSLNVPVGTVAQ 351

Query: 304 TGNYPQALSCLN-SSPWIIDSGATDHMTSFSCLFDSYSPVYSKEK--------------- 363
           TG    ALS  N S+PWIIDSGA++HMT+ S LF SY      EK               
Sbjct: 352 TGKNSWALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFLSSGSEKVRIADGSYSSIAGKG 411

Query: 364 ------------------------------------------SVLPMDQDSGETIGRARM 423
                                                     S +  DQ+SG+ IG AR 
Sbjct: 412 NIKISEHITLQSVLHVPKFACNLLSVHKLSKDTNCSVLFHSSSCVFQDQNSGKMIGTARE 471

Query: 424 IDGLYYFDEVSTSHKKIQGLSSVS-SLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKGID 483
           I+GLYY DE    +KK   L S S  L V + +M WHRRLGHP+F YLK+LFP   K I+
Sbjct: 472 INGLYYLDENPLGNKKASALHSTSPPLSVSDEVMLWHRRLGHPSFPYLKYLFPEFSKEIN 531

Query: 484 CSVFQCEDC---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRW--------- 543
            S   CE C   K HR +F  K Y  S PFYL H+DVWGPSK+ T +GK+W         
Sbjct: 532 SSQLDCEACHLAKDHRVSFSSKPYSASKPFYLFHSDVWGPSKIKTMSGKKWFVTFIDDHT 591

Query: 544 ------------------------IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIH 603
                                   IETQFQTKI IL SDNGTE+FN+   TFL  KGIIH
Sbjct: 592 RVCWVYLMEKKSEVAERFEDFFQMIETQFQTKIGILRSDNGTEYFNKYLNTFLVAKGIIH 651

Query: 604 QATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTK---- 663
           Q+TCRDTPQQNG+AERKNRHLLE+ RA+M SM+VPKYL G+A+LTA YLINRMPT+    
Sbjct: 652 QSTCRDTPQQNGIAERKNRHLLEVTRAIMLSMNVPKYLWGNAILTACYLINRMPTRVLKY 711

Query: 664 --------------------------------SCRSSS--------------------PS 723
                                           SC SS+                    P+
Sbjct: 712 ETPLQVLQKKFPTSRITTNLPQRVMRKSCQGESCHSSNEEDNFWEPLPTLDDLVTTNHPT 771

Query: 724 ISSME------------NSSTGGETLQTDLTG-RDPELKFYTRRNRTQRGRNQTVELTQD 733
              ME             S TGGET    LTG R+ ELK Y R+   +      +     
Sbjct: 772 TKIMEPGYLNSELLDNIASETGGET----LTGNRNAELKVYVRKRFHKDTTTPIISPADI 831

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BLAST of ClCG01G016445 vs. NCBI nr
Match: CAN79134.1 (hypothetical protein VITISV_000843 [Vitis vinifera])

HSP 1 Score: 642.1 bits (1655), Expect = 5.8e-180
Identity = 393/941 (41.76%), Postives = 495/941 (52.60%), Query Frame = 0


Query: 15  ENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQG 74
           ENSMVMTWL+NSM EDIN NYMCY T +ELW++V QMY DLGNQSQ+FEL LKLG++RQG
Sbjct: 24  ENSMVMTWLVNSMEEDINCNYMCYPTIQELWENVNQMYYDLGNQSQIFELTLKLGEIRQG 83

Query: 75  GNSVTQYFHSLKRIWQELDLFETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRG 134
            ++VT+YF+SLK+IWQ+LD F TYEWKS  D  H++KT++D RI+KFL GLNVEFDE   
Sbjct: 84  EDNVTKYFNSLKQIWQDLDFFNTYEWKSAEDGLHHKKTMEDNRIFKFLAGLNVEFDE--- 143

Query: 135 RILGKSILPNLNDVFSKVRREESRRNVMIGKKAVDSVDSSALVTESTAMKASDQSNKTHD 194
                                                                   K+ +
Sbjct: 144 -------------------------------------------------------RKSDE 203

Query: 195 KPHVWCDHCNKPCHTRETCWKLHGKPPNWKSSKQYERYSHQHASNANVVDSSPL-KEQID 254
           +P  WCD CNKP HTRE CWK+HGKP NWK  K  ++         N  ++SP   EQ++
Sbjct: 204 RPRFWCDFCNKPRHTRENCWKIHGKPANWK-GKTGDKPGRAIIPTTNEAETSPFTTEQME 263

Query: 255 QILKLLKSNYT-GNPSVSLAQTGNYPQALSC-LNSSPWIIDSGATDHMTSFSCLFDSYSP 314
             L LLKSN T G  SVSLA TGN   ALSC   S+PWI+D GA+DHMT+ S +F+SYSP
Sbjct: 264 HFLALLKSNLTSGTSSVSLAHTGNELYALSCRFKSTPWIVDFGASDHMTNSSNMFESYSP 323

Query: 315 VYSKE--------------------------KSVL---PMDQDSGETIGRARMIDGLYYF 374
               +                          KSVL    +DQ SG+TIG ARMIDGLYYF
Sbjct: 324 CPGNKKVRIANGNFLPIVGKGLIKISEGIDLKSVLHVPKLDQSSGKTIGSARMIDGLYYF 383

Query: 375 DEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKGIDCSVFQCED 434
           ++   S+K  QGLSS+SSL V++ IM WH RLGHP+F YLKHLFP LF+ +D   FQCE 
Sbjct: 384 EDNLPSNKIAQGLSSISSLFVRDQIMVWHCRLGHPSFSYLKHLFPVLFQKVDPLSFQCES 443

Query: 435 C---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRW----------------- 494
           C   K  R T++PK Y  S PFYL H+DVWGPSKV T +GK+W                 
Sbjct: 444 CLLAKSQRKTYIPKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFINDHTRLCWVYLM 503

Query: 495 ----------------IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTP 554
                           IE QFQTKI IL SDNG E+FN+   TF ++KGI+HQ++C DT 
Sbjct: 504 REKSKVERIFKEFYRMIENQFQTKISILRSDNGIEYFNKVLETFSNEKGILHQSSCSDTS 563

Query: 555 QQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTKSCRSSSP----- 614
           +QNG+AE KN+HLLE+ARA+MF M++PKYL  DA+LTA+YLINRMPTK  + ++P     
Sbjct: 564 EQNGIAECKNKHLLEVARAMMFYMNIPKYLWRDAILTASYLINRMPTKILQYTTPLECLK 623

Query: 615 ------------------------------------------------------------ 674
                                                                       
Sbjct: 624 KVFPESRINSELPLKIFGCTTYVHIPKRSRSKLDPRAEKCVFVGYTPNKKGYKCFNPLTK 683

Query: 675 ------SISSMEN--------------------------------SSTGGETLQTDLTGR 730
                  +S MEN                                 S   E  +T  T  
Sbjct: 684 RFYTTMDVSFMENVPYFTKNLLQGEKLVEPNFWEIVEPLTSVILDISLEKENKETKXTES 743

[Close]

BLAST of ClCG01G016445 vs. NCBI nr
Match: XP_024044152.1 (uncharacterized protein LOC18046468 isoform X2 [Citrus clementina])

HSP 1 Score: 589.3 bits (1518), Expect = 4.4e-164
Identity = 352/936 (37.61%), Postives = 493/936 (52.67%), Query Frame = 0


Query: 15   ENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQG 74
            +NSM+M+WL+NSM ++I   Y+   TAK+LWD+VT+ YSDLGN +Q+++L  ++ + +QG
Sbjct: 241  DNSMIMSWLVNSMEQEIGQTYLFLPTAKDLWDAVTETYSDLGNSAQIYDLKTRIRETKQG 300

Query: 75   GNSVTQYFHSLKRIWQELDLFETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRG 134
               VT+Y++ LK +WQELD +   EW+   D   Y+K ++  R+++FL GL+ + DEVRG
Sbjct: 301  SQGVTKYYNILKGLWQELDQYYDGEWECAVDSAKYKKMLEKERVFEFLAGLSSDLDEVRG 360

Query: 135  RILGKSILPNLNDVFSKVRREESRRNVMIGKKAVDSVDSSALVTESTAMKASDQSNKTHD 194
            R+LGK  LP+  +VFS VRREESR+NVM+G  + ++    ++  E+  +  +    K+ +
Sbjct: 361  RVLGKEPLPSTREVFSYVRREESRKNVMMGGSSAENSALISVTPEAPLVGGTKNLKKSDE 420

Query: 195  KPHVWCDHCNKPCHTRETCWKLHGKPPNWKSSKQYERYS--------HQHASNANVVDSS 254
            K  VWCD+C+KP HTR+ CWKLHGKPPN K++K   ++S        +Q  +N    +S 
Sbjct: 421  KDRVWCDYCHKPRHTRDACWKLHGKPPNLKNNKFSGKHSRGFQVVGENQPTTNTGETESQ 480

Query: 255  PL-KEQIDQILKLL-KSNYTGNPS--VSLAQTGNYPQALSCL--NSSPWIIDSGATDHMT 314
               KEQ++Q+ + L +S    NPS   SLAQ GN   AL  +     PWIIDSGATDHMT
Sbjct: 481  LFTKEQLEQLYRFLNQSQSLPNPSSFSSLAQKGNNFTALGVVYEKQDPWIIDSGATDHMT 540

Query: 315  SFSCLFDSYSPVYSKEK--------------------------SVLPM------------ 374
            S S LF SY P    +K                          SVL +            
Sbjct: 541  SHSKLFSSYIPCSGSQKIKIADGSLSSVAGKGSIPISTNLVLTSVLHVPNLSCNLLSVSK 600

Query: 375  -------------------DQDSGETIGRARMIDGLYYFDEVSTSHKKIQGLSSVSSLPV 434
                               D  SG+ IG AR +DGLYYF+E  +   + Q  ++  +  +
Sbjct: 601  ITKDLHCIAKFSPSYCEFQDLCSGKKIGSAREVDGLYYFEEDVSLCGEAQAANNEVTFSI 660

Query: 435  QETIMFWHRRLGHPNFVYLKHLFPGLFKGIDCSVFQCEDC---KHHRSTFLPKSYKPSSP 494
            ++ IM WH RLGHP+F YL+HLFP LFK  + S+FQCE C   KHHR++F  + YK S+P
Sbjct: 661  EDEIMLWHLRLGHPSFSYLQHLFPLLFKNKNPSLFQCEICVLSKHHRASFPSQPYKKSAP 720

Query: 495  FYLIHTDVWGPSKVLTKNGKRW---------------------------------IETQF 554
            F LIH+D+WGPS+V   +G +W                                 I+TQF
Sbjct: 721  FSLIHSDIWGPSRVTNISGAKWFITFIDDHTRVCWVYLLKEKSETATVFKTFHTMIQTQF 780

Query: 555  QTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARALM 614
            Q KI++  +DNG E+F      +  + GI+HQ++C DTPQQNGVAERKNRHLLE+AR+LM
Sbjct: 781  QAKIQVFRTDNGREYFATALGHYFMENGIVHQSSCVDTPQQNGVAERKNRHLLEVARSLM 840

Query: 615  FSMHVPKYLLGDAVLTAAYLINRMPTKSCRSSSP-------------------------- 674
            F+  VPK   G+A+LTA+YLINRMPT+     SP                          
Sbjct: 841  FTNRVPKQFWGEAILTASYLINRMPTRIFNFQSPLNVFTKVYPYAKVFTSLPPKIFGCIA 900

Query: 675  --SISSMENSSTGGETL----------------------------------------QTD 733
               +     S      L                                        +T 
Sbjct: 901  FVHVHKQNRSKLDPRALKCVFLGYSPTQKGYKCYDPLSNKFFVTMDVTFFENRSFFPKTS 960

[Close]

BLAST of ClCG01G016445 vs. NCBI nr
Match: XP_024044151.1 (uncharacterized protein LOC18046468 isoform X1 [Citrus clementina])

HSP 1 Score: 589.3 bits (1518), Expect = 4.4e-164
Identity = 352/936 (37.61%), Postives = 493/936 (52.67%), Query Frame = 0


Query: 15   ENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQG 74
            +NSM+M+WL+NSM ++I   Y+   TAK+LWD+VT+ YSDLGN +Q+++L  ++ + +QG
Sbjct: 433  DNSMIMSWLVNSMEQEIGQTYLFLPTAKDLWDAVTETYSDLGNSAQIYDLKTRIRETKQG 492

Query: 75   GNSVTQYFHSLKRIWQELDLFETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRG 134
               VT+Y++ LK +WQELD +   EW+   D   Y+K ++  R+++FL GL+ + DEVRG
Sbjct: 493  SQGVTKYYNILKGLWQELDQYYDGEWECAVDSAKYKKMLEKERVFEFLAGLSSDLDEVRG 552

Query: 135  RILGKSILPNLNDVFSKVRREESRRNVMIGKKAVDSVDSSALVTESTAMKASDQSNKTHD 194
            R+LGK  LP+  +VFS VRREESR+NVM+G  + ++    ++  E+  +  +    K+ +
Sbjct: 553  RVLGKEPLPSTREVFSYVRREESRKNVMMGGSSAENSALISVTPEAPLVGGTKNLKKSDE 612

Query: 195  KPHVWCDHCNKPCHTRETCWKLHGKPPNWKSSKQYERYS--------HQHASNANVVDSS 254
            K  VWCD+C+KP HTR+ CWKLHGKPPN K++K   ++S        +Q  +N    +S 
Sbjct: 613  KDRVWCDYCHKPRHTRDACWKLHGKPPNLKNNKFSGKHSRGFQVVGENQPTTNTGETESQ 672

Query: 255  PL-KEQIDQILKLL-KSNYTGNPS--VSLAQTGNYPQALSCL--NSSPWIIDSGATDHMT 314
               KEQ++Q+ + L +S    NPS   SLAQ GN   AL  +     PWIIDSGATDHMT
Sbjct: 673  LFTKEQLEQLYRFLNQSQSLPNPSSFSSLAQKGNNFTALGVVYEKQDPWIIDSGATDHMT 732

Query: 315  SFSCLFDSYSPVYSKEK--------------------------SVLPM------------ 374
            S S LF SY P    +K                          SVL +            
Sbjct: 733  SHSKLFSSYIPCSGSQKIKIADGSLSSVAGKGSIPISTNLVLTSVLHVPNLSCNLLSVSK 792

Query: 375  -------------------DQDSGETIGRARMIDGLYYFDEVSTSHKKIQGLSSVSSLPV 434
                               D  SG+ IG AR +DGLYYF+E  +   + Q  ++  +  +
Sbjct: 793  ITKDLHCIAKFSPSYCEFQDLCSGKKIGSAREVDGLYYFEEDVSLCGEAQAANNEVTFSI 852

Query: 435  QETIMFWHRRLGHPNFVYLKHLFPGLFKGIDCSVFQCEDC---KHHRSTFLPKSYKPSSP 494
            ++ IM WH RLGHP+F YL+HLFP LFK  + S+FQCE C   KHHR++F  + YK S+P
Sbjct: 853  EDEIMLWHLRLGHPSFSYLQHLFPLLFKNKNPSLFQCEICVLSKHHRASFPSQPYKKSAP 912

Query: 495  FYLIHTDVWGPSKVLTKNGKRW---------------------------------IETQF 554
            F LIH+D+WGPS+V   +G +W                                 I+TQF
Sbjct: 913  FSLIHSDIWGPSRVTNISGAKWFITFIDDHTRVCWVYLLKEKSETATVFKTFHTMIQTQF 972

Query: 555  QTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARALM 614
            Q KI++  +DNG E+F      +  + GI+HQ++C DTPQQNGVAERKNRHLLE+AR+LM
Sbjct: 973  QAKIQVFRTDNGREYFATALGHYFMENGIVHQSSCVDTPQQNGVAERKNRHLLEVARSLM 1032

Query: 615  FSMHVPKYLLGDAVLTAAYLINRMPTKSCRSSSP-------------------------- 674
            F+  VPK   G+A+LTA+YLINRMPT+     SP                          
Sbjct: 1033 FTNRVPKQFWGEAILTASYLINRMPTRIFNFQSPLNVFTKVYPYAKVFTSLPPKIFGCIA 1092

Query: 675  --SISSMENSSTGGETL----------------------------------------QTD 733
               +     S      L                                        +T 
Sbjct: 1093 FVHVHKQNRSKLDPRALKCVFLGYSPTQKGYKCYDPLSNKFFVTMDVTFFENRSFFPKTS 1152

[Close]

BLAST of ClCG01G016445 vs. NCBI nr
Match: CAN72141.1 (hypothetical protein VITISV_017108 [Vitis vinifera])

HSP 1 Score: 565.5 bits (1456), Expect = 6.9e-157
Identity = 358/894 (40.04%), Postives = 465/894 (52.01%), Query Frame = 0


Query: 95  FETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRGRILGKSILPNLNDVFSKVRR 154
           +  ++ +++ D +H++KT++D RI+KFLVGLNVEFDEVR RI+ +  LP++ + FS+VRR
Sbjct: 83  YTIWDAENSMDGRHHKKTMEDNRIFKFLVGLNVEFDEVRERIIERQPLPSIGEAFSEVRR 142

Query: 155 EESRRNVMIGKKAVD-SVDSSALVTESTAM-KASDQSNKTHDKPHVWCDHCNKPCHTRET 214
           EES+RNVM+GKK    +++ S LVT      K +    K+ ++P VWCD CNKP HTRE 
Sbjct: 143 EESQRNVMLGKKGPGVAIEGSTLVTTGGGYNKVATFQRKSDERPRVWCDFCNKPRHTREN 202

Query: 215 CWKLHGKPPNWKSSKQYERYSHQHASNANVVDSSPL-KEQIDQILKLLKSNYT-GNPSVS 274
           CWK+HGK  NWK  K  ++        AN  ++S    EQ++ +L LLKSN T G  SVS
Sbjct: 203 CWKIHGKLANWK-GKTGDKPGQAIIPTANEAETSLFTTEQMEHLLALLKSNLTSGTSSVS 262

Query: 275 LAQTGNYPQALSC-LNSSPWIIDSGATDHMTSFSCLFDSYSP------------------ 334
           LA TGN   ALSC   S+PWIIDSGA+DHMT+ S +F+SYSP                  
Sbjct: 263 LAHTGNELYALSCRFKSTPWIIDSGASDHMTNSSNMFESYSPCPGNKKVQIADGNFSPIA 322

Query: 335 ---------------------------------------VYSKEKSVLPMDQDSGETIGR 394
                                                  V   E   +  D+ S +TIG 
Sbjct: 323 GKGLIKISEGIDLKFVLHVPKLTCNLLFVSKLSRDFNCCVIFYESHCIFQDRSSRKTIGS 382

Query: 395 ARMIDGLYYFDEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKG 454
           ARMI+GLYYF++   S+K  QGLSS+SSL V++ IM WH +LG P+F YLKHLFP LF+ 
Sbjct: 383 ARMINGLYYFEDNLPSNKIAQGLSSISSLFVRDQIMVWHCKLGPPSFSYLKHLFPVLFQK 442

Query: 455 IDCSVFQCEDC---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRW------- 514
           +D   FQCE C   K  R T++ K Y  S PFYL H+DVWGPSKV T +GK+W       
Sbjct: 443 VDPLSFQCESCLLAKSQRKTYISKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFIDD 502

Query: 515 --------------------------IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGI 574
                                     IE QFQTKI IL SDNGT++FN+   TF + KGI
Sbjct: 503 HTRLCWVYLMREKSEVERIFKEFYKMIENQFQTKISILRSDNGTKYFNKVLETFSNKKGI 562

Query: 575 IHQATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTKSC 634
           +HQ++C DTPQQNG+A+RKN+HLLE+ARA+MF M++PKYL GDA+LTA+YLINRMPTK  
Sbjct: 563 LHQSSCSDTPQQNGIAQRKNKHLLEVARAMMFYMNIPKYLWGDAILTASYLINRMPTKIL 622

Query: 635 RSSSP------------------------------------------------------- 694
           + ++P                                                       
Sbjct: 623 QYTTPLKCLKKVFPKSRINFELPLKIFGCTTYVHIPKRSRFKLDPRAEKCVFVGYTPNKK 682

Query: 695 ----------------SISSMEN------------------------------------- 733
                            +S MEN                                     
Sbjct: 683 GYKCFNPLTKRFYTTMDVSFMENVPYFTKNLLQGEKLVEPNFWEIVEPFPSVILDISLEK 742

[Close]

BLAST of ClCG01G016445 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.1e-23
Identity = 115/466 (24.68%), Postives = 197/466 (42.27%), Query Frame = 0


Query: 366 TIMFWHRRLGHPN----FVYLKHLFPGLFKGIDCSVFQCEDC---KHHRSTFLPKSYKPS 425
           ++  WH+R+GH +     +  K       KG   +V  C+ C   K HR +F   S +  
Sbjct: 421 SVDLWHKRMGHMSEKGLQILAKKSLISYAKG--TTVKPCDYCLFGKQHRVSFQTSSERKL 480

Query: 426 SPFYLIHTDVWGPSKVLTKNGKRW---------------------------------IET 485
           +   L+++DV GP ++ +  G ++                                 +E 
Sbjct: 481 NILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVER 540

Query: 486 QFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARA 545
           +   K++ L SDNG E+ +     +    GI H+ T   TPQ NGVAER NR ++E  R+
Sbjct: 541 ETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRS 600

Query: 546 LMFSMHVPKYLLGDAVLTAAYLINRMPTK------------------------SCRSSSP 605
           ++    +PK   G+AV TA YLINR P+                          CR+ + 
Sbjct: 601 MLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA- 660

Query: 606 SISSMENSSTGGETLQTDLTGRDPE---------LKFYTRRNRTQRGRNQTVELTQDQSD 665
            +   + +    +++     G   E         +K    R+R    R   V    D S+
Sbjct: 661 HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSE 720

Query: 666 TPVNGPKNSGISLSPSSHN------TLPNVSD--------------LDIPIAQRKGSCQC 725
              NG   + +++  +S+N      T   VS+              LD  + + +   Q 
Sbjct: 721 KVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQG 780

Query: 726 TKYLIANYLSYHRLSDNHKAFTSK---ITNLFLPRNIQEALN---DSNWKLAVIEEMNAL 732
            +       S     ++ +  +++   I++   P +++E L+    +    A+ EEM +L
Sbjct: 781 EEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESL 840

[Close]

BLAST of ClCG01G016445 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-20
Identity = 145/616 (23.54%), Postives = 217/616 (35.23%), Query Frame = 0


Query: 323  DQDSGETIGRARMIDGLYYFDEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHP----- 382
            D ++G  + + +  D LY +   S+     Q +S  +S   + T   WH RLGHP     
Sbjct: 404  DLNTGVPLLQGKTKDELYEWPIASS-----QAVSMFASPCSKATHSSWHSRLGHPSLAIL 463

Query: 383  NFVYLKHLFPGLFKGIDCSVFQCEDC---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKV 442
            N V   H  P L       +  C DC   K H+  F   +   S P   I++DVW  S +
Sbjct: 464  NSVISNHSLPVL--NPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPI 523

Query: 443  LTKNGKRW---------------------------------IETQFQTKIRILHSDNGTE 502
            L+ +  R+                                 +E +FQT+I  L+SDNG E
Sbjct: 524  LSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGE 583

Query: 503  FFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAV 562
            F       +L   GI H  +   TP+ NG++ERK+RH++E+   L+    VPK     A 
Sbjct: 584  FV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAF 643

Query: 563  LTAAYLINRMPTKSCRSSSP----------------------------SISSMENSSTGG 622
              A YLINR+PT   +  SP                            +   +E+ S   
Sbjct: 644  SVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQC 703

Query: 623  ETLQTDLTG------RDPELKFYTRR-----------NRTQRGRNQTVELTQDQS----- 682
              +   LT         P  + YT R           + T  G + + E   D +     
Sbjct: 704  AFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPS 763

Query: 683  -----DTPV--------------------------------------------------- 732
                  TP+                                                   
Sbjct: 764  HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAP 823

[Close]

BLAST of ClCG01G016445 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-17
Identity = 139/612 (22.71%), Postives = 199/612 (32.52%), Query Frame = 0


Query: 323  DQDSGETIGRARMIDGLYYFDEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHPNFVYL 382
            D ++G  + + +  D LY +   S+     Q +S  +S   + T   WH RLGHP    L
Sbjct: 425  DLNTGVPLLQGKTKDELYEWPIASS-----QPVSLFASPSSKATHSSWHARLGHPAPSIL 484

Query: 383  KHLFPGLFKGI---DCSVFQCEDC---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLT 442
              +       +         C DC   K ++  F   +   + P   I++DVW  S +L+
Sbjct: 485  NSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILS 544

Query: 443  KNGKRW---------------------------------IETQFQTKIRILHSDNGTEFF 502
             +  R+                                 +E +FQT+I   +SDNG EF 
Sbjct: 545  HDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV 604

Query: 503  NEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLT 562
                  +    GI H  +   TP+ NG++ERK+RH++E    L+    +PK     A   
Sbjct: 605  --ALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAV 664

Query: 563  AAYLINRMPT-------------------------------------------------- 622
            A YLINR+PT                                                  
Sbjct: 665  AVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVF 724

Query: 623  ------------------------------------------------------------ 682
                                                                        
Sbjct: 725  LGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHT 784

Query: 683  -----------KSCRS--------SSPSISSMENSSTGGETLQTDLTGRDPELKFYT--R 732
                        SC          SSPS +   NS      L +  +   P     T  R
Sbjct: 785  TLPTRTPVLPAPSCSDPHHAATPPSSPS-APFRNSQVSSSNLDSSFSSSFPSSPEPTAPR 844

[Close]

BLAST of ClCG01G016445 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-16
Identity = 64/216 (29.63%), Postives = 95/216 (43.98%), Query Frame = 0


Query: 370 WHRRLGHPN-----FVYLKHLF--PGLFKGIDCSVFQCEDCKHHRSTFLP-KSYKPSS-- 429
           WH R GH +      +  K++F    L   ++ S   CE C + +   LP K  K  +  
Sbjct: 418 WHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHI 477

Query: 430 --PFYLIHTDVWGPSKVLTKNGKRWI---------------------------------E 489
             P +++H+DV GP   +T + K +                                  E
Sbjct: 478 KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537

Query: 490 TQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIAR 541
             F  K+  L+ DNG E+ +     F   KGI +  T   TPQ NGV+ER  R + E AR
Sbjct: 538 AHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKAR 597

HSP 2 Score: 65.5 bits (158), Expect = 2.9e-09
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 666 IQEALNDSNWKLAVIEEMNALK-HGTWDIVDLPEDKKAVGCKWVFTIKCNADGSIERYKA 725
           IQ   + S+W+ A+  E+NA K + TW I   PE+K  V  +WVF++K N  G+  RYKA
Sbjct: 897 IQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKA 956

Query: 726 RLVAKGFT 733
           RLVA+GFT
Sbjct: 957 RLVARGFT 964

[Close]

BLAST of ClCG01G016445 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-11
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 663 PRNIQEALNDSNWKLAVIEEMNAL-KHGTWDIVDLPEDKKAVGCKWVFTIKCNADGSIER 722
           P+++  AL D  W  A+ EE++AL ++ TW +V  P ++  +GCKWVF  K ++DG+++R
Sbjct: 28  PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87

Query: 723 YKARLVAKGF 732
            KARLVAKGF
Sbjct: 88  LKARLVAKGF 97

[Close]

BLAST of ClCG01G016445 vs. ExPASy TrEMBL
Match: A0A2Z6NTX3 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_220160 PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 7.3e-205
Identity = 438/945 (46.35%), Postives = 542/945 (57.35%), Query Frame = 0


Query: 4   TKSVRMYIRGQ-------------------------ENSMVMTWLINSMVEDINSNYMCY 63
           ++SVRMY+RG+                         ENSMVMTWL+NSM E+I++NY+CY
Sbjct: 52  SRSVRMYLRGKGMIGYITGDKKQPDKKGAGFDTWDAENSMVMTWLVNSMTEEISANYLCY 111

Query: 64  TTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQGGNSVTQYFHSLKRIWQELDLFETY 123
            TAK+LWD+V+QMYSDL NQSQV+EL L+LG ++QG +SVT+YF+ LKRIWQ+LDLF+ Y
Sbjct: 112 DTAKDLWDNVSQMYSDLENQSQVYELTLQLGKIQQGEDSVTKYFNCLKRIWQDLDLFDEY 171

Query: 124 EWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRGRILGKSILPNLNDVFSKVRREESR 183
           EWKS  D KHY KTVD  R++KFL GLNVEFDEVRGRILG++ +P + +VF++VRREESR
Sbjct: 172 EWKSPEDCKHYMKTVDVSRVFKFLAGLNVEFDEVRGRILGRNPIPQIGEVFAEVRREESR 231

Query: 184 RNVMIGKKAVDS---VDSSALVTESTAMKASDQSNKTHDKPHVWCDHCNKPCHTRETCWK 243
           R VM+GKK V +   V+ SAL       K+        DK H++CD+C +  H RE C+K
Sbjct: 232 RQVMLGKKVVAAPTPVEGSALAVPQVNRKSFPNPRGGGDKNHLFCDYCGRNRHVREDCFK 291

Query: 244 LHGKPPNWKSSKQYERYSHQHASNANVVDSSPL-KEQIDQILKLLKSNYTGN-PSVSLAQ 303
           LHG+P N K+ K    + ++  ++AN   SSP  KEQ+D + KLL+SN + N P  ++AQ
Sbjct: 292 LHGRPNNGKAGK----FGNRPVASANEAGSSPFTKEQLDHLFKLLRSNSSLNVPVGTVAQ 351

Query: 304 TGNYPQALSCLN-SSPWIIDSGATDHMTSFSCLFDSYSPVYSKEK--------------- 363
           TG    ALS  N S+PWIIDSGA++HMT+ S LF SY      EK               
Sbjct: 352 TGKNSWALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFLSSGSEKVRIADGSYSSIAGKG 411

Query: 364 ------------------------------------------SVLPMDQDSGETIGRARM 423
                                                     S +  DQ+SG+ IG AR 
Sbjct: 412 NIKISEHITLQSVLHVPKFACNLLSVHKLSKDTNCSVLFHSSSCVFQDQNSGKMIGTARE 471

Query: 424 IDGLYYFDEVSTSHKKIQGLSSVS-SLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKGID 483
           I+GLYY DE    +KK   L S S  L V + +M WHRRLGHP+F YLK+LFP   K I+
Sbjct: 472 INGLYYLDENPLGNKKASALHSTSPPLSVSDEVMLWHRRLGHPSFPYLKYLFPEFSKEIN 531

Query: 484 CSVFQCEDC---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRW--------- 543
            S   CE C   K HR +F  K Y  S PFYL H+DVWGPSK+ T +GK+W         
Sbjct: 532 SSQLDCEACHLAKDHRVSFSSKPYSASKPFYLFHSDVWGPSKIKTMSGKKWFVTFIDDHT 591

Query: 544 ------------------------IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIH 603
                                   IETQFQTKI IL SDNGTE+FN+   TFL  KGIIH
Sbjct: 592 RVCWVYLMEKKSEVAERFEDFFQMIETQFQTKIGILRSDNGTEYFNKYLNTFLVAKGIIH 651

Query: 604 QATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTK---- 663
           Q+TCRDTPQQNG+AERKNRHLLE+ RA+M SM+VPKYL G+A+LTA YLINRMPT+    
Sbjct: 652 QSTCRDTPQQNGIAERKNRHLLEVTRAIMLSMNVPKYLWGNAILTACYLINRMPTRVLKY 711

Query: 664 --------------------------------SCRSSS--------------------PS 723
                                           SC SS+                    P+
Sbjct: 712 ETPLQVLQKKFPTSRITTNLPQRVMRKSCQGESCHSSNEEDNFWEPLPTLDDLVTTNHPT 771

Query: 724 ISSME------------NSSTGGETLQTDLTG-RDPELKFYTRRNRTQRGRNQTVELTQD 733
              ME             S TGGET    LTG R+ ELK Y R+   +      +     
Sbjct: 772 TKIMEPGYLNSELLDNIASETGGET----LTGNRNAELKVYVRKRFHKDTTTPIISPADI 831

[Close]

BLAST of ClCG01G016445 vs. ExPASy TrEMBL
Match: A5BNN1 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_000843 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 2.8e-180
Identity = 393/941 (41.76%), Postives = 495/941 (52.60%), Query Frame = 0


Query: 15  ENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQG 74
           ENSMVMTWL+NSM EDIN NYMCY T +ELW++V QMY DLGNQSQ+FEL LKLG++RQG
Sbjct: 24  ENSMVMTWLVNSMEEDINCNYMCYPTIQELWENVNQMYYDLGNQSQIFELTLKLGEIRQG 83

Query: 75  GNSVTQYFHSLKRIWQELDLFETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRG 134
            ++VT+YF+SLK+IWQ+LD F TYEWKS  D  H++KT++D RI+KFL GLNVEFDE   
Sbjct: 84  EDNVTKYFNSLKQIWQDLDFFNTYEWKSAEDGLHHKKTMEDNRIFKFLAGLNVEFDE--- 143

Query: 135 RILGKSILPNLNDVFSKVRREESRRNVMIGKKAVDSVDSSALVTESTAMKASDQSNKTHD 194
                                                                   K+ +
Sbjct: 144 -------------------------------------------------------RKSDE 203

Query: 195 KPHVWCDHCNKPCHTRETCWKLHGKPPNWKSSKQYERYSHQHASNANVVDSSPL-KEQID 254
           +P  WCD CNKP HTRE CWK+HGKP NWK  K  ++         N  ++SP   EQ++
Sbjct: 204 RPRFWCDFCNKPRHTRENCWKIHGKPANWK-GKTGDKPGRAIIPTTNEAETSPFTTEQME 263

Query: 255 QILKLLKSNYT-GNPSVSLAQTGNYPQALSC-LNSSPWIIDSGATDHMTSFSCLFDSYSP 314
             L LLKSN T G  SVSLA TGN   ALSC   S+PWI+D GA+DHMT+ S +F+SYSP
Sbjct: 264 HFLALLKSNLTSGTSSVSLAHTGNELYALSCRFKSTPWIVDFGASDHMTNSSNMFESYSP 323

Query: 315 VYSKE--------------------------KSVL---PMDQDSGETIGRARMIDGLYYF 374
               +                          KSVL    +DQ SG+TIG ARMIDGLYYF
Sbjct: 324 CPGNKKVRIANGNFLPIVGKGLIKISEGIDLKSVLHVPKLDQSSGKTIGSARMIDGLYYF 383

Query: 375 DEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKGIDCSVFQCED 434
           ++   S+K  QGLSS+SSL V++ IM WH RLGHP+F YLKHLFP LF+ +D   FQCE 
Sbjct: 384 EDNLPSNKIAQGLSSISSLFVRDQIMVWHCRLGHPSFSYLKHLFPVLFQKVDPLSFQCES 443

Query: 435 C---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRW----------------- 494
           C   K  R T++PK Y  S PFYL H+DVWGPSKV T +GK+W                 
Sbjct: 444 CLLAKSQRKTYIPKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFINDHTRLCWVYLM 503

Query: 495 ----------------IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTP 554
                           IE QFQTKI IL SDNG E+FN+   TF ++KGI+HQ++C DT 
Sbjct: 504 REKSKVERIFKEFYRMIENQFQTKISILRSDNGIEYFNKVLETFSNEKGILHQSSCSDTS 563

Query: 555 QQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTKSCRSSSP----- 614
           +QNG+AE KN+HLLE+ARA+MF M++PKYL  DA+LTA+YLINRMPTK  + ++P     
Sbjct: 564 EQNGIAECKNKHLLEVARAMMFYMNIPKYLWRDAILTASYLINRMPTKILQYTTPLECLK 623

Query: 615 ------------------------------------------------------------ 674
                                                                       
Sbjct: 624 KVFPESRINSELPLKIFGCTTYVHIPKRSRSKLDPRAEKCVFVGYTPNKKGYKCFNPLTK 683

Query: 675 ------SISSMEN--------------------------------SSTGGETLQTDLTGR 730
                  +S MEN                                 S   E  +T  T  
Sbjct: 684 RFYTTMDVSFMENVPYFTKNLLQGEKLVEPNFWEIVEPLTSVILDISLEKENKETKXTES 743

[Close]

BLAST of ClCG01G016445 vs. ExPASy TrEMBL
Match: A0A2N9GQ49 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29495 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 6.0e-159
Identity = 365/811 (45.01%), Postives = 450/811 (55.49%), Query Frame = 0


Query: 4   TKSVRMYIRGQ-------------------------ENSMVMTWLINSMVEDINSNYMCY 63
           ++SVRMYIRG+                         ENSMVMTWL+NSM EDI+SNYMCY
Sbjct: 49  SQSVRMYIRGRGKMGYLTGEKTAPAEADPTYATWDAENSMVMTWLVNSMEEDISSNYMCY 108

Query: 64  TTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQGGNSVTQYFHSLKRIWQELDLFETY 123
            TA+ELW++V QMYSDLGNQSQ+FEL LKLG+MRQG +SVT+YF+SLKR+WQ+LDLF TY
Sbjct: 109 PTAQELWENVNQMYSDLGNQSQIFELTLKLGEMRQGEDSVTKYFNSLKRVWQDLDLFNTY 168

Query: 124 EWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRGRILGKSILPNLNDVFSKVRREESR 183
           EWKS  D +H++K V+D RI+KFL GLN+E DEVRGR++G+  +P + DVFS+VRREESR
Sbjct: 169 EWKSVEDSRHHKKIVEDNRIFKFLAGLNIECDEVRGRVIGRQPVPTIGDVFSEVRREESR 228

Query: 184 RNVMIGKKAVD-SVDSSALV-TESTAMKASDQSNKTHDKPHVWCDHCNKPCHTRETCWKL 243
           RNVM+GKK    +V+SSALV  ++ + KA     +T DKP VWCD+CNKP HTRETCWK+
Sbjct: 229 RNVMLGKKGPGVAVESSALVAADANSSKAITYQRRTDDKPQVWCDYCNKPRHTRETCWKI 288

Query: 244 HGKPPNWKSSKQYERYSHQHASNANVVDSSPLKEQIDQILKLLKSN-YTGNPSVSLAQTG 303
           HGKP NWKSSK  +R      +      +S  KEQ++ +L LLKSN  +G PSVS+AQTG
Sbjct: 289 HGKPANWKSSKPGDRSGRAFPTANEAEVTSFTKEQMEHLLTLLKSNSSSGIPSVSVAQTG 348

Query: 304 NYPQALS-CLNSS-PWIIDSGATDHMTSFSCLFDSYSPVYSKE----------------- 363
           N P ALS CLNSS PWIIDSGA+DHMTS    F+SYSP    E                 
Sbjct: 349 NEPNALSCCLNSSAPWIIDSGASDHMTSSHNFFESYSPCSGIEKVRIADGSFSSIAGKGL 408

Query: 364 ---------KSVLPM---------DQDSGETIGRARMIDGLYYFDEVSTSHKKIQGLSSV 423
                    KSVL +         DQ SG TIG ARMI+GLYYFD+  +S KK QG SS+
Sbjct: 409 IKISERIDLKSVLHVPKLACNLLSDQSSGRTIGSARMINGLYYFDDNLSSDKKAQGFSSI 468

Query: 424 SSLPVQETIM---------FWHRRLGHPNFV-----YLKHLFPGLFKGIDCSVFQCEDCK 483
           SS+ V+E IM         FW +    PN +           P +F  I+ S+   +D  
Sbjct: 469 SSISVREQIMGEIIGEEDNFWEKSAPLPNTIVDFPSQDTESSPQIFPEIENSI---QDAG 528

Query: 484 HHRSTFLPKSYKPSSPFYLIHTDVWGP-SKVLTKNGKRWIETQFQTKIRILHSDNGTEFF 543
             R +FLP   +      ++  D   P S++L    KR  E      I            
Sbjct: 529 SGRISFLPTEKE------ILQKDTCNPNSELLVYTRKRIPERSKDLPI------------ 588

Query: 544 NEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLT 603
                                 P QN  +E  N   L I+                    
Sbjct: 589 ---------------------IPVQN-QSESLNNGSLNISG------------------- 648

Query: 604 AAYLINRMPTKSCRSSSPSISSMENSSTGGETLQTDLTGRDPELKFYTRRNRTQRGRNQT 663
                N  P     +S P +SS   S +                                
Sbjct: 649 -----NSSPIPILSNSIPILSSAPISDS-------------------------------- 708

Query: 664 VELTQDQSDTPVNGPKNSGISLSPSSHNTLPNVSDLDIPIAQRKGSCQCTKYLIANYLSY 723
                     P+  PKN                SDLDIPIA RKG   CTKY IA Y+SY
Sbjct: 709 ---------DPIISPKN--------------KTSDLDIPIAIRKGIRTCTKYPIAKYISY 737

Query: 724 HRLSDNHKAFTSKITN-LFLPRNIQEALNDSNWKLAVIEEMNAL-KHGTWDIVDLPEDKK 733
            RLS+NH+AF S I++ + +PRNIQEAL+D NWKLAV+EEMNAL K+GTW++VDLP DKK
Sbjct: 769 QRLSNNHRAFISNISHVVVVPRNIQEALDDPNWKLAVLEEMNALRKNGTWELVDLPRDKK 737

[Close]

BLAST of ClCG01G016445 vs. ExPASy TrEMBL
Match: A5B9Y8 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_017108 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 3.3e-157
Identity = 358/894 (40.04%), Postives = 465/894 (52.01%), Query Frame = 0


Query: 95  FETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRGRILGKSILPNLNDVFSKVRR 154
           +  ++ +++ D +H++KT++D RI+KFLVGLNVEFDEVR RI+ +  LP++ + FS+VRR
Sbjct: 83  YTIWDAENSMDGRHHKKTMEDNRIFKFLVGLNVEFDEVRERIIERQPLPSIGEAFSEVRR 142

Query: 155 EESRRNVMIGKKAVD-SVDSSALVTESTAM-KASDQSNKTHDKPHVWCDHCNKPCHTRET 214
           EES+RNVM+GKK    +++ S LVT      K +    K+ ++P VWCD CNKP HTRE 
Sbjct: 143 EESQRNVMLGKKGPGVAIEGSTLVTTGGGYNKVATFQRKSDERPRVWCDFCNKPRHTREN 202

Query: 215 CWKLHGKPPNWKSSKQYERYSHQHASNANVVDSSPL-KEQIDQILKLLKSNYT-GNPSVS 274
           CWK+HGK  NWK  K  ++        AN  ++S    EQ++ +L LLKSN T G  SVS
Sbjct: 203 CWKIHGKLANWK-GKTGDKPGQAIIPTANEAETSLFTTEQMEHLLALLKSNLTSGTSSVS 262

Query: 275 LAQTGNYPQALSC-LNSSPWIIDSGATDHMTSFSCLFDSYSP------------------ 334
           LA TGN   ALSC   S+PWIIDSGA+DHMT+ S +F+SYSP                  
Sbjct: 263 LAHTGNELYALSCRFKSTPWIIDSGASDHMTNSSNMFESYSPCPGNKKVQIADGNFSPIA 322

Query: 335 ---------------------------------------VYSKEKSVLPMDQDSGETIGR 394
                                                  V   E   +  D+ S +TIG 
Sbjct: 323 GKGLIKISEGIDLKFVLHVPKLTCNLLFVSKLSRDFNCCVIFYESHCIFQDRSSRKTIGS 382

Query: 395 ARMIDGLYYFDEVSTSHKKIQGLSSVSSLPVQETIMFWHRRLGHPNFVYLKHLFPGLFKG 454
           ARMI+GLYYF++   S+K  QGLSS+SSL V++ IM WH +LG P+F YLKHLFP LF+ 
Sbjct: 383 ARMINGLYYFEDNLPSNKIAQGLSSISSLFVRDQIMVWHCKLGPPSFSYLKHLFPVLFQK 442

Query: 455 IDCSVFQCEDC---KHHRSTFLPKSYKPSSPFYLIHTDVWGPSKVLTKNGKRW------- 514
           +D   FQCE C   K  R T++ K Y  S PFYL H+DVWGPSKV T +GK+W       
Sbjct: 443 VDPLSFQCESCLLAKSQRKTYISKPYYASKPFYLFHSDVWGPSKVTTISGKKWFVTFIDD 502

Query: 515 --------------------------IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGI 574
                                     IE QFQTKI IL SDNGT++FN+   TF + KGI
Sbjct: 503 HTRLCWVYLMREKSEVERIFKEFYKMIENQFQTKISILRSDNGTKYFNKVLETFSNKKGI 562

Query: 575 IHQATCRDTPQQNGVAERKNRHLLEIARALMFSMHVPKYLLGDAVLTAAYLINRMPTKSC 634
           +HQ++C DTPQQNG+A+RKN+HLLE+ARA+MF M++PKYL GDA+LTA+YLINRMPTK  
Sbjct: 563 LHQSSCSDTPQQNGIAQRKNKHLLEVARAMMFYMNIPKYLWGDAILTASYLINRMPTKIL 622

Query: 635 RSSSP------------------------------------------------------- 694
           + ++P                                                       
Sbjct: 623 QYTTPLKCLKKVFPKSRINFELPLKIFGCTTYVHIPKRSRFKLDPRAEKCVFVGYTPNKK 682

Query: 695 ----------------SISSMEN------------------------------------- 733
                            +S MEN                                     
Sbjct: 683 GYKCFNPLTKRFYTTMDVSFMENVPYFTKNLLQGEKLVEPNFWEIVEPFPSVILDISLEK 742

[Close]

BLAST of ClCG01G016445 vs. ExPASy TrEMBL
Match: A5BR93 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_012324 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.8e-150
Identity = 331/857 (38.62%), Postives = 465/857 (54.26%), Query Frame = 0


Query: 15  ENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQG 74
           ENSM+M+WLINSM  DI  N++ + TAK++WD+  + YS   N S++F++   L D RQG
Sbjct: 83  ENSMIMSWLINSMNNDIGENFLLFGTAKDIWDAAKETYSSSENTSELFQVESALHDFRQG 142

Query: 75  GNSVTQYFHSLKRIWQELDLFETYEWKSTNDQKHYRKTVDDGRIYKFLVGLNVEFDEVRG 134
             SVTQY+++L R WQ+LDLFET+ WK ++D   YR+ V+  R++KF +GLN E D+VRG
Sbjct: 143 EQSVTQYYNTLTRYWQQLDLFETHSWKCSDDAATYRQIVEQKRLFKFFLGLNRELDDVRG 202

Query: 135 RILGKSILPNLNDVFSKVRREESRRNVMIGKK--AVDSVDSSALVTESTAMKASDQSNKT 194
           RI+G   LP+L + FS+VRREESR+ VM+G K     ++D+SAL   S      D+  + 
Sbjct: 203 RIMGIKPLPSLREAFSEVRREESRKKVMMGSKEQPAPTLDASALAARSFNSSGGDRQKR- 262

Query: 195 HDKPHVWCDHCNKPCHTRETCWKLHGKPPNWKSSKQYERYSHQH----ASNANVVDSSPL 254
            D+P  WCD+C KP H +ETCWKLHGKP +WK   +++R    H    + + +V + SP 
Sbjct: 263 -DRP--WCDYCKKPGHYKETCWKLHGKPADWKPKPRFDRDGRAHVAANSESTSVPEPSPF 322

Query: 255 -KEQIDQILKLLKSNYTGNPSVSLAQTGNYPQALSCLNSSPWIIDSGATDHMTSFSCLFD 314
            KEQ++ + KLL    +G+ +  +A T N           PWI+D+GA+DHMT  + +  
Sbjct: 323 NKEQMEMLQKLLSQVGSGS-TTGVAFTANRG------GMRPWIVDTGASDHMTGDAAILQ 382

Query: 315 SYSPVY----------SKEK----------------SVLPM------------------- 374
           +Y P            SK K                SVL +                   
Sbjct: 383 NYKPSNGHSSVHIADGSKSKIAGTGSIKLTKDLYLDSVLHVPNLDCNLLSISKLAHDLQC 442

Query: 375 ------------DQDSGETIGRARMIDGLY------YFDEVS-----TSHKKIQGLSSVS 434
                       D  SG+ IG A +  GLY      + ++VS      S    +  +SVS
Sbjct: 443 VTKFYPNLCVFQDLKSGKMIGSAELCSGLYLLSCGQFSNQVSQASCVQSQSMSESFNSVS 502

Query: 435 SLPVQE--TIMFWHRRLGHPNFVYLKHLFPGLFKGIDCSVFQCEDC---KHHRSTFLPKS 494
           +  V +   I+  H RLGHP+FVYL  LFP LF   + + + CE C   KH R+ +    
Sbjct: 503 NSKVNKDSEIIMLHYRLGHPSFVYLAKLFPRLFINKNPASYHCEICQFAKHTRTVYPQIP 562

Query: 495 YKPSSPFYLIHTDVWGPSKVLTKNGKRW-------------------------------- 554
           YKPS+ F L+H+DVWGPS++   +G RW                                
Sbjct: 563 YKPSTVFSLVHSDVWGPSRIKNISGTRWFVTFVDDHTRVTWVFLMKEKSEVGHIFQTFNR 622

Query: 555 -IETQFQTKIRILHSDNGTEFFNEPQTTFLHDKGIIHQATCRDTPQQNGVAERKNRHLLE 614
            ++ QF +KI++L SDN  E+F    +T+L + GIIH ++C DTPQQNGVAERKNRHLLE
Sbjct: 623 MVQNQFNSKIQVLKSDNAKEYFTSSLSTYLQNHGIIHISSCVDTPQQNGVAERKNRHLLE 682

Query: 615 IARALMFSMHVPKYLLGDAVLTAAYLINRMPTKSCRSSSPS---ISSMENSSTGGETLQT 674
           +AR LMFS +VP Y  G+A+LTA YLINRMP++     SP    +    ++      L  
Sbjct: 683 VARCLMFSSNVPNYFWGEAILTATYLINRMPSRVLTFQSPRQLFLKQFPHTHAASSDLPL 742

Query: 675 DLTG--------RDPELKFYTRRNR--------TQRGRNQTVELTQDQSDT------PVN 733
            + G             KF  R N+        TQ+GR +  EL      T        +
Sbjct: 743 KVFGCTAFVHVYPQNRSKFAPRANKCIFLGYSPTQKGRRKRQELEHGSQSTCGQYIDSNS 802

[Close]

BLAST of ClCG01G016445 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 86.7 bits (213), Expect = 8.7e-17
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 637 IANYLSYHRLSDNHKAFTSKITNLFLPRNIQEALNDSNWKLAVIEEMNALK-HGTWDIVD 696
           I+ +LSY ++S  + +F   I     P    EA     W  A+ +E+ A++   TW+I  
Sbjct: 60  ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICT 119

Query: 697 LPEDKKAVGCKWVFTIKCNADGSIERYKARLVAKGFT 733
           LP +KK +GCKWV+ IK N+DG+IERYKARLVAKG+T
Sbjct: 120 LPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156

[Close]

BLAST of ClCG01G016445 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 4.5e-13
Identity = 47/151 (31.13%), Postives = 84/151 (55.63%), Query Frame = 0


Query: 14  QENSMVMTWLINSMVEDINSNYMCYTTAKELWDSVTQMYSDLGNQSQVFELNLKLGDMRQ 73
           Q N+MVM WL+NSM + +  + M   TA ++W+ + +++    +  ++++L  +L  +RQ
Sbjct: 81  QCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVD-LKIYQLRRRLATLRQ 140

Query: 74  GGNSVTQYFHSLKRIWQELDLFETY-EWKSTNDQKHYRKTVDDGR----IYKFLVG--LN 133
           GG+SV +YF  L ++W EL  +    E K         K  ++ R     Y+FL+G  LN
Sbjct: 141 GGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEAREKEQRYEFLMGLKLN 200

Query: 134 VEFDEVRGRILGKSILPNLNDVFSKVRREES 158
             F+ V  +I+ +   P+L++ F+ V+  ES
Sbjct: 201 QGFEAVTTKIMFQKPPPSLHEAFAMVKDAES 230

[Close]

BLAST of ClCG01G016445 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 72.4 bits (176), Expect = 1.7e-12
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 663 PRNIQEALNDSNWKLAVIEEMNAL-KHGTWDIVDLPEDKKAVGCKWVFTIKCNADGSIER 722
           P+++  AL D  W  A+ EE++AL ++ TW +V  P ++  +GCKWVF  K ++DG+++R
Sbjct: 28  PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87

Query: 723 YKARLVAKGF 732
            KARLVAKGF
Sbjct: 88  LKARLVAKGF 97

The following BLAST results are available for this feature:

BLAST of ClCG01G016445 vs. NCBI nr


Match Name	E-value	Identity	Description
GAU39772.1	1.5e-204	46.35	hypothetical protein TSUD_220160 [Trifolium subterraneum]	[more]
CAN79134.1	5.8e-180	41.76	hypothetical protein VITISV_000843 [Vitis vinifera]	[more]
XP_024044152.1	4.4e-164	37.61	uncharacterized protein LOC18046468 isoform X2 [Citrus clementina]	[more]
XP_024044151.1	4.4e-164	37.61	uncharacterized protein LOC18046468 isoform X1 [Citrus clementina]	[more]
CAN72141.1	6.9e-157	40.04	hypothetical protein VITISV_017108 [Vitis vinifera]	[more]

BLAST of ClCG01G016445 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	6.1e-23	24.68	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	1.7e-20	23.54	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.7e-17	22.71	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.1e-16	29.63	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	2.4e-11	47.14	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of ClCG01G016445 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z6NTX3	7.3e-205	46.35	Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ...	[more]
A5BNN1	2.8e-180	41.76	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A2N9GQ49	6.0e-159	45.01	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29495 PE=4 SV=1	[more]
A5B9Y8	3.3e-157	40.04	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A5BR93	1.8e-150	38.62	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]

BLAST of ClCG01G016445 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.7e-17	45.36	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
AT1G21280.1	4.5e-13	31.13	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha...	[more]
ATMG00820.1	1.7e-12	47.14	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 690..731 e-value: 4.5E-10 score: 39.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 411..593 e-value: 4.4E-21 score: 77.1
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 338..405 e-value: 2.0E-14 score: 53.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 533..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 533..558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 576..611
None	No IPR available	PANTHER	PTHR37610	FAMILY NOT NAMED	coord: 14..151
None	No IPR available	PANTHER	PTHR37610:SF41	SUBFAMILY NOT NAMED	coord: 14..151
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 452..549 score: 12.468168
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 415..541

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G016445.1	ClCG01G016445.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding