ClCG01G013620 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCACCATACCCTTCCTTTCTTCTCTATATAAACCGCATCGAATCCCCAAATTTCTTCATATCGCGAAATTCTCTCCCTTCGTTAGGGTTTCAAGGGCGAAGATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTCCGGGTGAAGTGTAACGAGGACGATACGATTGGCGACTTGAAGAAGCTCGTCGCCGCTCAGACCGGTACCAGGGCAGAGAAAATCAGGATCCAAAAGTGGTACAACATCTACAAGGATCATATCACTCTCAAGGATTACGAGATTCACGACGGCATGGGTCTCGAGCTCTATTACAACTGA ATGACCACCATACCCTTCCTTTCTTCTCTATATAAACCGCATCGAATCCCCAAATTTCTTCATATCGCGAAATTCTCTCCCTTCGTTAGGGTTTCAAGGGCGAAGATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTCCGGGTGAAGTGTAACGAGGACGATACGATTGGCGACTTGAAGAAGCTCGTCGCCGCTCAGACCGGTACCAGGGCAGAGAAAATCAGGATCCAAAAGTGGTACAACATCTACAAGGATCATATCACTCTCAAGGATTACGAGATTCACGACGGCATGGGTCTCGAGCTCTATTACAACTGA ATGACCACCATACCCTTCCTTTCTTCTCTATATAAACCGCATCGAATCCCCAAATTTCTTCATATCGCGAAATTCTCTCCCTTCGTTAGGGTTTCAAGGGCGAAGATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTCCGGGTGAAGTGTAACGAGGACGATACGATTGGCGACTTGAAGAAGCTCGTCGCCGCTCAGACCGGTACCAGGGCAGAGAAAATCAGGATCCAAAAGTGGTACAACATCTACAAGGATCATATCACTCTCAAGGATTACGAGATTCACGACGGCATGGGTCTCGAGCTCTATTACAACTGA MTTIPFLSSLYKPHRIPKFLHIAKFSPFVRVSRAKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYN Homology
BLAST of ClCG01G013620 vs. NCBI nr
Match: KCW51380.1 (hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis]) HSP 1 Score: 156.0 bits (393), Expect = 1.8e-34 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of ClCG01G013620 vs. NCBI nr
Match: KAG6520004.1 (hypothetical protein ZIOFF_017033 [Zingiber officinale]) HSP 1 Score: 155.2 bits (391), Expect = 3.2e-34 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of ClCG01G013620 vs. NCBI nr
Match: CAA7058928.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 154.1 bits (388), Expect = 7.0e-34 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of ClCG01G013620 vs. NCBI nr
Match: XP_026416497.1 (ubiquitin-like protein 5 [Papaver somniferum]) HSP 1 Score: 153.7 bits (387), Expect = 9.2e-34 Identity = 74/81 (91.36%), Postives = 77/81 (95.06%), Query Frame = 0
BLAST of ClCG01G013620 vs. NCBI nr
Match: RWW43537.1 (hypothetical protein BHE74_00050784 [Ensete ventricosum]) HSP 1 Score: 153.7 bits (387), Expect = 9.2e-34 Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy Swiss-Prot
Match: Q9FGZ9 (Ubiquitin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=UBL5 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 7.8e-36 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy Swiss-Prot
Match: Q3T0Z3 (Ubiquitin-like protein 5 OS=Bos taurus OX=9913 GN=UBL5 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.8e-28 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy Swiss-Prot
Match: Q9BZL1 (Ubiquitin-like protein 5 OS=Homo sapiens OX=9606 GN=UBL5 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.8e-28 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy Swiss-Prot
Match: Q6EGX7 (Ubiquitin-like protein 5 OS=Mesocricetus auratus OX=10036 GN=UBL5 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.8e-28 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy Swiss-Prot
Match: Q9EPV8 (Ubiquitin-like protein 5 OS=Mus musculus OX=10090 GN=Ubl5 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 7.8e-28 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy TrEMBL
Match: A0A059ADC7 (Ubiquitin-like domain-containing protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00924 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 9.0e-35 Identity = 77/80 (96.25%), Postives = 79/80 (98.75%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy TrEMBL
Match: J3N5Z0 (Ubiquitin-like domain-containing protein OS=Oryza brachyantha OX=4533 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34 Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy TrEMBL
Match: A0A6D2L053 (Ubiquitin-like domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS46164 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.4e-34 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy TrEMBL
Match: A0A3L6PNH3 (Ubiquitin-like protein 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM18G00450 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 4.4e-34 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0
BLAST of ClCG01G013620 vs. ExPASy TrEMBL
Match: A0A176W1C7 (Ubiquitin-like domain-containing protein OS=Marchantia polymorpha subsp. ruderalis OX=1480154 GN=AXG93_3786s1220 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.8e-34 Identity = 75/83 (90.36%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of ClCG01G013620 vs. TAIR 10
Match: AT5G42300.1 (ubiquitin-like protein 5 ) HSP 1 Score: 151.0 bits (380), Expect = 5.5e-37 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of ClCG01G013620 vs. TAIR 10
Match: AT3G45180.1 (Ubiquitin-like superfamily protein ) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35 Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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