ClCG01G013240 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACAACATCTCTCCTAATTCCTCTCATCCTCTCATTTCTTCCACTCTTCACTTCCACCACCAATATCCACTCCGACGCCTGCCGCTCCTTCTGCGGCAACATCACCGTCGACTATCCCTTCTCTCTCCAATACGGTTGCGGCCATCCCGGTTACCGCGACCTTCTCTACTGTATGAACGATGTTCTAATGTTCCACATCCGATCCGGATCTTACAGAGTGTTAGACATCGATTACGCTTACGAAGCCCTAACTCTCCACGATCCTCACATGTCCACCTGCGATACCATCGTCCTCGGCGGTCGAGGCAATGGCTTCGACATCGAGGAGTGGCGGTCGCCGTACCTGAATCCAACTGCCGATAACGCCTTTCTCCTCATCGGCTGCTCCGCCCAATCGCCGCTCTTCCAAGGGTTCCCGAACAAGCATCTGGTCTGCAGAAACATTTCGGGAATGGGTTGCGAGGAATACTACGACTGTCCGGCTTGGGATTTATTGGGCCGCAGAAGACCGGGCCGGGTTTATGGGTCCGGTCCACCGGAGTGCTGTGCGGTTCCGTTTGGGTCAATTAAGGCTATAAATCTCACGAAGCTTCAATGTGAAGGATATAGTAGTGCCTATAATTTGGCCCCGTTGAGGATTAATGGGCCTGATGAGTGGGCCTATGGGATTCGTGTGAAATATTCGGTCCAAGCAAATCAAGACTTTTGTCGAGCGTGCCAAGCTACTGGTGGCACGTGCGGGTACGGTACGGATAGTGTTAGACAGCTGTGTATGTGTGGGACCTCCAATTCTACCTCCACTTGTGATTTTGGTAAGTTGCGGCTGATTTCCCAATTTTTTTTTCTTAAATTATAAATTCGGTCACAAGAATGTTACAATTAAGTTTAAAAATCATAATTTACTGCTAATAGTTTGACAAAAGTTCATATATCAAATCATAAAAAGCTAAATTCTAATTAAAAATTGTAATGATTAAATTCTATCTTTCTTCCAAATCTAGTTTCTAAATTAAAATTGAATTTTTTTCTTCGTTTTTCGTTTGTAGGTTTTGAGAATTATAAGGTTTTTTTTAATAAAACAATAAATAAAATAAAATTTGTTTTTTTTTTTTTTTTTTTTTTTTAATTAGTATAGAAAACTTAGTAGCTGATTTAATAATTTCGGTAACTGTAATTATTTTTTCTTGTAAACGTTTCCTTGGAAACATCAAATTTCCCCCCTAAATTTCGTAAAGAGAATTATGATTTTTATAATATAAAATATAAACAAATATTAAAAAACTATGAAGCTTATTATATATATATACTGTCCAAATTTTTATCAAACACCCACCTAACTGAGCGCTTGTGATTCGAAACATTTTGGTATGTTTATAAATAATTTGAGGAAAACAAACTTAAATATTATAATTTTAACTTTAACTTATAAAATGTCAGACAATTTTGGTTTCTATAATAAGTTTTTTTTTTTTTTTTTTTAATTATTATTATTATTAGTAGTACTGAAATTAGTAACCGTTTTAATAATTTTGGCAACTCTATATTTTCTTTTCTTTCTGCATCAATTTTTTTTATTTTCCTAATTTNAAATAAAATAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAGTATAGAAAACTTAGTAGCTGATTTAATAATTTCGGTAACTGTAATTATTTTTTCTTGTAAACGTTTCCTTGGAAACATCAAATTTCCCCCCTAAATTTCGTAAAGAGAATTATGATTTTTATAATATAAAATATAAACAAATATTAAAAAACTATGAAGCTTATTATATATATATACTGTCCAAATTTTTATCAAACACCCACCTAACTGAGCGCTTGTGATTCGAAACATTTTGGTATGTTTATAAATAATTTGAGGAAAACAAACTTAAATATTATAATTTTAACTTTAACTTATAAAATGTCAGACAATTTTGGTTTCTATAATAAGTTTTTTTTTTTTTTTTTTTAATTATTATTATTATTAGTAGTACTGAAATTAGTAACCGTTTTAATAATTTTGGCAACTCTATATTTTCTTTTCTTTCTGCATCAATTTTTTTTATTTTCCTAATTTTCATAAACAGAAGCAAGACTTATTAATATAAAATATTAAAAAAGAAAAAACAAATAAAAAATATAGGTTTAATGAGGGTGTTTAGATGTAAAATTAAGAGAGTAAAAAATACAAAAATGATTATTAAGACATATCTTTTCTAATAAATAAAAAAGGTAGTCATTTTAAATAACAAAACTAAATATTTTTTAATATAGCAAAATATTAGTGATAGACAATAATAAATATTGATAGAAATTTATCAATATCTATCATGAATAGACGGTGATAGACGATAGTAGTTATTAATGTTTATTACTCTATTTTATTGTATTTTAGTTAATTTTCTTATATTTAAAAATACCTTAAAACATAAGTTGGATTTTTAATCTTGCCTTGAAAGAAACGATGGAGAAAAGCCAAAAGGATCTCTTTCTCAAAACAAAACCAAAGAAAAGGAAGGAGAAAAGAGTCCTAACCGAAAACAAAATGAAAAGATGATAAACTTTACGTTTTTGTAATTTTAAAATCATTTTATTTACACTTTTCTATGTATTAGACGAATACTAACTGTTTAATAGGAATAAAATAAATACTTAAATAATCAGAAAAAAAAAAATATGTAATAGAATATATGTTGATTAATTAATTTTTTATTTATTTTTTTTTATTTTGGAAGCCACCCATAATTGAGCTCTTCGATACCAATATTCCATAGACTTGATATTATTATTTGAGCCATAATTGAGATTACGCAAATTCTCATTACTTTTTCATAGTACCAATAATTGAGATACGAAAAAAGAAACAATAATTGAGATTACGCAAATTCTCATTATTTCATAGTACCAATAATTGAGATACGAAAATCAATATAGTTGATGTTTTAGGTTCCTAAATCCAACAAACTTTTAACAGATATAAAGATATTTAAACTATATTAAACTATTGTTTTAAATAGAAATTATTGTTGATAAAAAAAAATATCAAACTATTTACAAATATAGAAAAAATTTAATGTTTATTATTAATAAGTAGTAGTAGACATCTATCGCTTGAGCGATAAAATAGATAGAAATCTATCGCAATCTATTGCTGATAAACAATGGAATTTTTATATATTTATAAATGAGTTGACTCATTTTGCTATATTTGAAAACAACTTTTTTTTTTTAAATTAAAAATTTGGATCTAAGAAAGTTAAAATTTAGTGTTTATGGTTTGATAAAATCTCATAAATAGTATCTATAATTTGATAAAATTATGTACTATTTATGAGAGTTTATCAAACATAATTACTTATTCTAATATTTTTCAAATTATAAGACCAAATTTATAATTTAACCTTGTTTTTAAGACTACATACATTAAACTATATATGTTCGTGTAATTTGCAGTTATGAGCTCCTCACCAAGGAGGAGGACACTGTGGACAATAATCAAAGCCCTATTAGCAGGTAATTACTTATGAAACGTTTAAATTTTGAGATTTGTGTCCATTTGGTCTTTTTGTTATTTCAAAAATCTCTAATCAGTCCAAAATTTTAATGTGTCTAATATAGGTTTGTAGTCTTTCAATTTTGTTTCTTATATACCTCTAATAAATTCGAAAATTTTGAAAAGTAATCGCTCTCCAAGATTTAAATTTGAATATTACTTTTAGTAAAACTTTTATCCTTCAATTTTGTGTACAGTAAATTCGTGATTTTTTAAAATTTAAAAGTTAAGGCCCCATTTGATAATCATTTGGTTTTTGAAAATTAACCCTAGAGGCACTACCTCTACCTTCAAATTTATTCATTTGTTATCTACTTTTTACCATTGGTTTAAAAAACCAAGCCAAATTTTGAAAACTAAAAAAATAGTTTTTAAATTTTTTTTTTGTTTTTGAAATTTGGTTAAGAATTCAACCATTGTACTTGAGAAAAATGCAAATCATTCGAAGAAATGGGAGTAAATAAGCTTATTGTTCGAAAACCAAAAACAAAAAACAAAATGGTTACCAAATGAGGTCTAAGTTATTAAATTTGTAATTTTAAGTGTGTGGAGTCTAAAAAGACACAAACTTATTCATGGACTAAATTTGTAATTTAACATTTTCTACCCTACAAAGAATGAGACGGAAGGAACAAAAAAAAAAACTCTCTTCTTTCCTTTTTTTTTTGTTTTTTTTTTAAAAATTATTTTAAATAAAAAATGTTTAAAATATTTAAAAATAACAGCAAAATACCGTCGTCTATCTGCAATAAACTACAATAGATTACTATCAGTGTCTATATCGCAGTCTATACAGATAAACAGTAAAATTTTACTATATTTATACAATTTTTTTTATAAATATTATTATTGATAAAAAAAGACTTTACTAAATGTGTAAATTAATACCGTTTTTCTAGCTTAGAATAATAATATTTGAAAAGTCTACAAATTGAAGAAGTATGCGTACAACAATATCTATGGTACTTTTTTTTTTTTTTTTTTCATACAATAAATTTGATGCTTGATATTATTTGTATTATTATTATAATTATTTTGAGAGTTTTTGTATTGTTATCTTGAATTTTGTTTAATTGATTTTGTTTGTAAATATAATAATTATAGGAAGCTGGATGCTGATGTTGTAG ATGTCAACAACATCTCTCCTAATTCCTCTCATCCTCTCATTTCTTCCACTCTTCACTTCCACCACCAATATCCACTCCGACGCCTGCCGCTCCTTCTGCGGCAACATCACCGTCGACTATCCCTTCTCTCTCCAATACGGTTGCGGCCATCCCGGTTACCGCGACCTTCTCTACTGTATGAACGATGTTCTAATGTTCCACATCCGATCCGGATCTTACAGAGTGTTAGACATCGATTACGCTTACGAAGCCCTAACTCTCCACGATCCTCACATGTCCACCTGCGATACCATCGTCCTCGGCGGTCGAGGCAATGGCTTCGACATCGAGGAGTGGCGGTCGCCGTACCTGAATCCAACTGCCGATAACGCCTTTCTCCTCATCGGCTGCTCCGCCCAATCGCCGCTCTTCCAAGGGTTCCCGAACAAGCATCTGGTCTGCAGAAACATTTCGGGAATGGGTTGCGAGGAATACTACGACTGTCCGGCTTGGGATTTATTGGGCCGCAGAAGACCGGGCCGGGTTTATGGGTCCGGTCCACCGGAGTGCTGTGCGGTTCCGTTTGGGTCAATTAAGGCTATAAATCTCACGAAGCTTCAATGTGAAGGATATAGTAGTGCCTATAATTTGGCCCCGTTGAGGATTAATGGGCCTGATGAGTGGGCCTATGGGATTCGTGTGAAATATTCGGTCCAAGCAAATCAAGACTTTTGTCGAGCGTGCCAAGCTACTGGTGGCACGTGCGGGTACGGTACGGATAGTGTTAGACAGCTGTGTATGTGTGGGACCTCCAATTCTACCTCCACTTGTGATTTTGTTATGAGCTCCTCACCAAGGAGGAGGACACTGTGGACAATAATCAAAGCCCTATTAGCAGGAAGCTGGATGCTGATGTTGTAG ATGTCAACAACATCTCTCCTAATTCCTCTCATCCTCTCATTTCTTCCACTCTTCACTTCCACCACCAATATCCACTCCGACGCCTGCCGCTCCTTCTGCGGCAACATCACCGTCGACTATCCCTTCTCTCTCCAATACGGTTGCGGCCATCCCGGTTACCGCGACCTTCTCTACTGTATGAACGATGTTCTAATGTTCCACATCCGATCCGGATCTTACAGAGTGTTAGACATCGATTACGCTTACGAAGCCCTAACTCTCCACGATCCTCACATGTCCACCTGCGATACCATCGTCCTCGGCGGTCGAGGCAATGGCTTCGACATCGAGGAGTGGCGGTCGCCGTACCTGAATCCAACTGCCGATAACGCCTTTCTCCTCATCGGCTGCTCCGCCCAATCGCCGCTCTTCCAAGGGTTCCCGAACAAGCATCTGGTCTGCAGAAACATTTCGGGAATGGGTTGCGAGGAATACTACGACTGTCCGGCTTGGGATTTATTGGGCCGCAGAAGACCGGGCCGGGTTTATGGGTCCGGTCCACCGGAGTGCTGTGCGGTTCCGTTTGGGTCAATTAAGGCTATAAATCTCACGAAGCTTCAATGTGAAGGATATAGTAGTGCCTATAATTTGGCCCCGTTGAGGATTAATGGGCCTGATGAGTGGGCCTATGGGATTCGTGTGAAATATTCGGTCCAAGCAAATCAAGACTTTTGTCGAGCGTGCCAAGCTACTGGTGGCACGTGCGGGTACGGTACGGATAGTGTTAGACAGCTGTGTATGTGTGGGACCTCCAATTCTACCTCCACTTGTGATTTTGTTATGAGCTCCTCACCAAGGAGGAGGACACTGTGGACAATAATCAAAGCCCTATTAGCAGGAAGCTGGATGCTGATGTTGTAG MSTTSLLIPLILSFLPLFTSTTNIHSDACRSFCGNITVDYPFSLQYGCGHPGYRDLLYCMNDVLMFHIRSGSYRVLDIDYAYEALTLHDPHMSTCDTIVLGGRGNGFDIEEWRSPYLNPTADNAFLLIGCSAQSPLFQGFPNKHLVCRNISGMGCEEYYDCPAWDLLGRRRPGRVYGSGPPECCAVPFGSIKAINLTKLQCEGYSSAYNLAPLRINGPDEWAYGIRVKYSVQANQDFCRACQATGGTCGYGTDSVRQLCMCGTSNSTSTCDFVMSSSPRRRTLWTIIKALLAGSWMLML Homology
BLAST of ClCG01G013240 vs. NCBI nr
Match: XP_038895734.1 (uncharacterized protein LOC120083896 [Benincasa hispida]) HSP 1 Score: 611.3 bits (1575), Expect = 4.5e-171 Identity = 284/303 (93.73%), Postives = 292/303 (96.37%), Query Frame = 0
BLAST of ClCG01G013240 vs. NCBI nr
Match: XP_008438554.1 (PREDICTED: uncharacterized protein LOC103483617 [Cucumis melo]) HSP 1 Score: 595.1 bits (1533), Expect = 3.3e-166 Identity = 278/303 (91.75%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of ClCG01G013240 vs. NCBI nr
Match: XP_011651618.1 (uncharacterized protein LOC101203279 [Cucumis sativus] >KGN64319.1 hypothetical protein Csa_014059 [Cucumis sativus]) HSP 1 Score: 591.3 bits (1523), Expect = 4.8e-165 Identity = 276/303 (91.09%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of ClCG01G013240 vs. NCBI nr
Match: XP_022923847.1 (uncharacterized protein LOC111431439 [Cucurbita moschata]) HSP 1 Score: 584.7 bits (1506), Expect = 4.5e-163 Identity = 269/299 (89.97%), Postives = 284/299 (94.98%), Query Frame = 0
BLAST of ClCG01G013240 vs. NCBI nr
Match: XP_023519425.1 (uncharacterized protein LOC111782839 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 583.9 bits (1504), Expect = 7.6e-163 Identity = 271/300 (90.33%), Postives = 284/300 (94.67%), Query Frame = 0
BLAST of ClCG01G013240 vs. ExPASy TrEMBL
Match: A0A1S3AWN5 (uncharacterized protein LOC103483617 OS=Cucumis melo OX=3656 GN=LOC103483617 PE=4 SV=1) HSP 1 Score: 595.1 bits (1533), Expect = 1.6e-166 Identity = 278/303 (91.75%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of ClCG01G013240 vs. ExPASy TrEMBL
Match: A0A0A0LTJ0 (GUB_WAK_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046160 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 2.3e-165 Identity = 276/303 (91.09%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of ClCG01G013240 vs. ExPASy TrEMBL
Match: A0A6J1E794 (uncharacterized protein LOC111431439 OS=Cucurbita moschata OX=3662 GN=LOC111431439 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.2e-163 Identity = 269/299 (89.97%), Postives = 284/299 (94.98%), Query Frame = 0
BLAST of ClCG01G013240 vs. ExPASy TrEMBL
Match: A0A6J1KNC6 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 OS=Cucurbita maxima OX=3661 GN=LOC111495060 PE=4 SV=1) HSP 1 Score: 580.9 bits (1496), Expect = 3.1e-162 Identity = 269/300 (89.67%), Postives = 282/300 (94.00%), Query Frame = 0
BLAST of ClCG01G013240 vs. ExPASy TrEMBL
Match: A0A6J1JZQ3 (uncharacterized protein LOC111490288 OS=Cucurbita maxima OX=3661 GN=LOC111490288 PE=4 SV=1) HSP 1 Score: 565.8 bits (1457), Expect = 1.0e-157 Identity = 257/302 (85.10%), Postives = 280/302 (92.72%), Query Frame = 0
BLAST of ClCG01G013240 vs. TAIR 10
Match: AT5G50290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-116 Identity = 189/294 (64.29%), Postives = 229/294 (77.89%), Query Frame = 0
BLAST of ClCG01G013240 vs. TAIR 10
Match: AT3G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 166.4 bits (420), Expect = 3.5e-41 Identity = 88/264 (33.33%), Postives = 138/264 (52.27%), Query Frame = 0
BLAST of ClCG01G013240 vs. TAIR 10
Match: AT1G10380.1 (Putative membrane lipoprotein ) HSP 1 Score: 134.0 bits (336), Expect = 1.9e-31 Identity = 89/300 (29.67%), Postives = 134/300 (44.67%), Query Frame = 0
BLAST of ClCG01G013240 vs. TAIR 10
Match: AT1G11915.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 2.5e-26 Identity = 87/275 (31.64%), Postives = 124/275 (45.09%), Query Frame = 0
BLAST of ClCG01G013240 vs. TAIR 10
Match: AT1G21230.1 (wall associated kinase 5 ) HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04 Identity = 43/171 (25.15%), Postives = 72/171 (42.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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