ClCG01G012790 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G012790
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 25676650 .. 25676909 (-)
RNA-Seq ExpressionClCG01G012790
SyntenyClCG01G012790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCGAAGTCGCATCAACATATTTGGAGATGAAGTGAAGCTGCGAAGTTGCACTAACATTTTGGAGATGAAGTAAAGCCGCACCAACATTCTGGAGATGGAGCAAAACTGCATCAACATTTTGGAGATGTAGCGAAAATGCACCAACATTTTGGAGATGACACCAAGTTGCATCAGCATTTTGGAGGTGGAGCGAAGTTGCACAAAATTTTGGAGATGGAGCGAAGCTGCATCAACATTTTGGAGATGGAGTGGTGA

mRNA sequence

ATGGGGCGAAGTCGCATCAACATATTTGGAGATGAAGTGAAGCTGCGAATAAAGCCGCACCAACATTCTGGAGATGGAGCAAAACTGCATCAACATTTTGGAGATGTAGCGAAAATGCACCAACATTTTGGAGATGACACCAAGTTGCATCAGCATTTTGGAGGTGGAGCGAAGTTGCACAAAATTTTGGAGATGGAGCGAAGCTGCATCAACATTTTGGAGATGGAGTGGTGA

Coding sequence (CDS)

ATGGGGCGAAGTCGCATCAACATATTTGGAGATGAAGTGAAGCTGCGAATAAAGCCGCACCAACATTCTGGAGATGGAGCAAAACTGCATCAACATTTTGGAGATGTAGCGAAAATGCACCAACATTTTGGAGATGACACCAAGTTGCATCAGCATTTTGGAGGTGGAGCGAAGTTGCACAAAATTTTGGAGATGGAGCGAAGCTGCATCAACATTTTGGAGATGGAGTGGTGA

Protein sequence

MGRSRINIFGDEVKLRIKPHQHSGDGAKLHQHFGDVAKMHQHFGDDTKLHQHFGGGAKLHKILEMERSCINILEMEW
Homology
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BLAST of ClCG01G012790 vs. NCBI nr
Match: XP_038887242.1 (LWamide neuropeptides-like [Benincasa hispida])

HSP 1 Score: 63.5 bits (153), Expect = 8.9e-07
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 

Query: 9   FGDEVKL------RIKPHQHSGDGAKLHQHFGDVAKMHQHFGDDTKLHQHFGGGAKLHKI 64
           FGDE KL      + KPHQ+ GD  KLHQ+ GD  K HQ+ GD+ K HQ+ G  AK H+ 
Sbjct: 61  FGDEAKLHQYLEDKAKPHQYLGDEVKLHQYLGDETKSHQYLGDEAKPHQYLGDEAKPHQY 120

The following BLAST results are available for this feature:
BLAST of ClCG01G012790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887242.18.9e-0750.82LWamide neuropeptides-like [Benincasa hispida][more]
BLAST of ClCG01G012790 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG01G012790 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG01G012790 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G012790.1ClCG01G012790.1mRNA