ClCG01G011700 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G011700
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrotrans_gag domain-containing protein
LocationCG_Chr01: 19755110 .. 19756455 (+)
RNA-Seq ExpressionClCG01G011700
SyntenyClCG01G011700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAAGGCAATACTAATATTCTGCCTCTTGATTCCGAGATTGAAAGGACGTGTAGAAGGAATCTAAGGGTTCAACACATTCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCGGGACTACTTCCAACCGACATTACCGGCAAATCAACCCGGAATAATGAATGTACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATTCACATAGCTAGAGAGCTAGTCTTCAGAGGAAGAACCAATGAAGATCCTCACAAGCACCTACGATCTTTCTTGGAGATATGCGGGACGGTAAAGATGAATGGCGTTTCTAACGATGCAATTAAACTAAGACTTTTCCCTTTCTCTTTACAGGACCGTGCTAAGGATTGGTTGGAAACCATCCCTCCAGATAGCATTACAACGTGGGAATCTTAGCTCAAGCTTTCTTGAACAAGTACTTTCCACCGGTTAAATCTCAAAGACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAACCTTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGAAGGTGCCCTCAACACGATTACCCGGATTGATTGCAAATTCAACTCTTCTATAATGGATTATCAAGCTCAACCAAATACATTCTAGATGCAACCACCGGAGGCTCAATTTTTTCAAAGAATGCTCAAGAGGCATATACCATACTAGAAGACTTGGACACTACATCGTACAACTGGCCATGCGAATGGTCTTCTCCAATCATCCCAAAAGCCACCGGACGATATGAGATGGACGAGGTAAGTTTTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCGAGCAAGTCCACCATCAATAGTTTCCCTTGTGGCCATGGCAAATCAACAAGAGCCTAGTGAGTTAGAAGTGACCAATTATGTAGATAGAGGACAATACCGAGGTCAACAATAACTCCCGACTCACTATCATCCCAACTTGAGGAATCACGAGAGCTTTTCATATGCCAACAACAAGAATGTGTTGCAAGCACCTCTAGGATTCAATGGAGCGGGAAATGCAAAGACATCATCACTAGAGAACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCCAAGCTATTTCAAGTACCGTTCAGAGCCAAGGTAAGACAATTCAAAATGGTAAGTTCCCTAGTTGCCCAGAGAGAAACCCGAAGGAGGAATCCAAGGTCGTGATTTTGAGGAGTGGGAAAAAGCTATCCACTCCCTTGATAAATGATGAAGATGATGAACCCCCACAAGAATAG

mRNA sequence

ATGCCTCAAGGCAATACTAATATTCTGCCTCTTGATTCCGAGATTGAAAGGACGTGTAGAAGGAATCTAAGGGTTCAACACATTCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCGGGACTACTTCCAACCGACATTACCGGCAAATCAACCCGGAATAATGAATGTACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATTCACATAGCTAGAGAGCTAGTCTTCAGAGGAAGAACCAATGAAGATCCTCACAAGCACCTACGATCTTTCTTGGAGATATGCGGGACGGTAAAGATGAATGGCGTTTCTAACGATGCAATTAAACTAAGACTTTTCCCTTTCTCTTTACAGGACCGTGCTAAGGATTGGTTGGAAACCATCCCTCCAGATAGCATTACAACACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAACCTTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGAAGCTCAACCAAATACATTCTAGATGCAACCACCGGAGGCTCAATTTTTTCAAAGAATGCTCAAGAGGCATATACCATACTAGAAGACTTGGACACTACATCGTACAACTGGCCATGCGAATGGTCTTCTCCAATCATCCCAAAAGCCACCGGACGATATGAGATGGACGAGGTAAGTTTTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCGAGCAAGTCCACCATCAATAGTTTCCCTTGTGGCCATGGCAAATCAACAAGAGCCTAGTGAGTTAGAAGTGACCAATTATGTAGATAGAGGACAATACCGAGGATTCAATGGAGCGGGAAATGCAAAGACATCATCACTAGAGAACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCCAAGCTATTTCAAGTACCGTTCAGAGCCAAGGTAAGACAATTCAAAATGGTAAGTTCCCTAGTTGCCCAGAGAGAAACCCGAAGGAGGAATCCAAGGTCGTGATTTTGAGGAGTGGGAAAAAGCTATCCACTCCCTTGATAAATGATGAAGATGATGAACCCCCACAAGAATAG

Coding sequence (CDS)

ATGCCTCAAGGCAATACTAATATTCTGCCTCTTGATTCCGAGATTGAAAGGACGTGTAGAAGGAATCTAAGGGTTCAACACATTCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCGGGACTACTTCCAACCGACATTACCGGCAAATCAACCCGGAATAATGAATGTACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATTCACATAGCTAGAGAGCTAGTCTTCAGAGGAAGAACCAATGAAGATCCTCACAAGCACCTACGATCTTTCTTGGAGATATGCGGGACGGTAAAGATGAATGGCGTTTCTAACGATGCAATTAAACTAAGACTTTTCCCTTTCTCTTTACAGGACCGTGCTAAGGATTGGTTGGAAACCATCCCTCCAGATAGCATTACAACACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAACCTTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGAAGCTCAACCAAATACATTCTAGATGCAACCACCGGAGGCTCAATTTTTTCAAAGAATGCTCAAGAGGCATATACCATACTAGAAGACTTGGACACTACATCGTACAACTGGCCATGCGAATGGTCTTCTCCAATCATCCCAAAAGCCACCGGACGATATGAGATGGACGAGGTAAGTTTTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCGAGCAAGTCCACCATCAATAGTTTCCCTTGTGGCCATGGCAAATCAACAAGAGCCTAGTGAGTTAGAAGTGACCAATTATGTAGATAGAGGACAATACCGAGGATTCAATGGAGCGGGAAATGCAAAGACATCATCACTAGAGAACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCCAAGCTATTTCAAGTACCGTTCAGAGCCAAGGTAAGACAATTCAAAATGGTAAGTTCCCTAGTTGCCCAGAGAGAAACCCGAAGGAGGAATCCAAGGTCGTGATTTTGAGGAGTGGGAAAAAGCTATCCACTCCCTTGATAAATGATGAAGATGATGAACCCCCACAAGAATAG

Protein sequence

MPQGNTNILPLDSEIERTCRRNLRVQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITTLRTEIGTFRQLEDEQPYEAWERYKDLLRSSTKYILDATTGGSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQNGKFPSCPERNPKEESKVVILRSGKKLSTPLINDEDDEPPQE
Homology
BLAST of ClCG01G011700 vs. NCBI nr
Match: WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 555.4 bits (1430), Expect = 3.6e-154
Identity = 310/464 (66.81%), Postives = 331/464 (71.34%), Query Frame = 0

Query: 1   MPQGNTNILPLDSEIERTCRRNLRVQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVP 60
           MP+ NTN+LPLD EI+RT RRNLR       EMAEEIPKAIRDYFQPTLPA+QPGIMNVP
Sbjct: 17  MPRDNTNLLPLDPEIDRTYRRNLRALLNQTTEMAEEIPKAIRDYFQPTLPASQPGIMNVP 76

Query: 61  INVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPF 120
           INVNNFELKPGLI +AREL FRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPF
Sbjct: 77  INVNNFELKPGLIQMARELAFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPF 136

Query: 121 SLQDRAKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQPYEAW 180
           SLQDRAKDWLETIPPDSITT                    LRTEIGTFRQLEDEQ YEAW
Sbjct: 137 SLQDRAKDWLETIPPDSITTWEILAQAFLNKYFPPAKSQRLRTEIGTFRQLEDEQLYEAW 196

Query: 181 ERYKDLLR---------------------SSTKYILDATTGGSIFSKNAQEAYTILEDLD 240
           ERYKDLLR                     SSTK ILDAT GGSIFSKNAQEAYTILEDL 
Sbjct: 197 ERYKDLLRRCPQHGYPDWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTILEDLA 256

Query: 241 TTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKLSQGSQARASPPSIVSL 300
           TTSYNWPCE +SP IPKA G YE+DEV+ LKAQ+ASLTNALSKL+ G QA+ +PPSI SL
Sbjct: 257 TTSYNWPCERASPNIPKAAGLYEVDEVNSLKAQMASLTNALSKLTAGGQAQTNPPSIASL 316

Query: 301 VAMANQQ-EPSELEVTNYVDRGQYR----------------------------------G 360
            A+A++     + E  NYVDRG YR                                  G
Sbjct: 317 AALASEMGVHGDNETANYVDRGHYRNYQHQQLPTHYHPNLRNHENFSYANNKNVLQAPQG 376

Query: 361 FNGAGNAKTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN---------- 372
           FNGAGNAKTSSLE+IMLDFVKESRSRTTTLENSVQAI+STVQSQGK +QN          
Sbjct: 377 FNGAGNAKTSSLEDIMLDFVKESRSRTTTLENSVQAIASTVQSQGKALQNLEVQLSQMKT 436

BLAST of ClCG01G011700 vs. NCBI nr
Match: XP_022157708.1 (uncharacterized protein LOC111024361 [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 2.3e-60
Identity = 157/400 (39.25%), Postives = 218/400 (54.50%), Query Frame = 0

Query: 25  VQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGR 84
           VQ +   ++ +     IRDY QP  P N  GI+N+PIN NN ELKPGLI + RE  FRG 
Sbjct: 11  VQPMERPQLEQNNQMTIRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGN 70

Query: 85  TNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR--AKDWLET-IPPDSITTL 144
             EDP+ HL  FL++CGTVKMNGV +DAI+LRLFP SLQD+   + +L    PP   T L
Sbjct: 71  ATEDPNNHLTIFLDVCGTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQL 130

Query: 145 RTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTG 204
           RTEI +FR+ + EQ +E WERYK+LLR                       T+ ILDA  G
Sbjct: 131 RTEIRSFRKYDYEQLFEVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAG 190

Query: 205 GSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNAL 264
           G++ S+  + AY +L+D+   S+ WP E S+    K  G YE+DE+S LKAQ+ +LTNA+
Sbjct: 191 GTLLSRTPENAYILLKDMADNSFQWPSERSN--AKKVAGMYEIDELSSLKAQVQALTNAV 250

Query: 265 SKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSSLENIM 324
           SKLS    + ++   +V+     +  EP+       +++ Q   F      K SSLE+++
Sbjct: 251 SKLSGPGTSHSN--ELVAATDTYSYYEPT-------IEQAQ---FTSHPAEKKSSLEDLL 310

Query: 325 LDFVKESRSRTTTLENSVQAISSTVQSQG-----------------KTIQNGKFPSCPER 376
             F+ E RSR + +EN V+ +   ++                     T+Q GKFPS  E 
Sbjct: 311 GAFINECRSRASRIENQVEGMEVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEV 370

BLAST of ClCG01G011700 vs. NCBI nr
Match: XP_022843226.1 (uncharacterized protein LOC111366761 [Olea europaea var. sylvestris])

HSP 1 Score: 229.9 bits (585), Expect = 3.5e-56
Identity = 164/454 (36.12%), Postives = 222/454 (48.90%), Query Frame = 0

Query: 5   NTNILPLDSEIERTCRRNLRVQHIHIEEMAEE---------IPKAIRDYFQPTLPANQPG 64
           N ++L +D E ERT R    +Q    E MAE+           +AIRDY +P +  N  G
Sbjct: 99  NLDLLHVDPEPERTFRILRGIQRNEREAMAEQDVRAANEDNQQRAIRDYIRPVVNDNYSG 158

Query: 65  IMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKL 124
           I    I   NFELKPGLI + ++  F G   EDP+ HL SFLEIC TVKMNGV+ DAI+L
Sbjct: 159 IARPAIVAKNFELKPGLIDMVQQNQFGGAAVEDPNAHLGSFLEICDTVKMNGVTEDAIRL 218

Query: 125 RLFPFSLQDRAKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQ 184
           RLF FSL+D+AK W +++P  SITT                    LR EI  F+QL+ E 
Sbjct: 219 RLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKSAQLRGEISQFKQLDFEP 278

Query: 185 PYEAWERYKDLLR---------------------SSTKYILDATTGGSIFSKNAQEAYTI 244
            YEAWER+KDLLR                       T+ ++DA  GG + +K A+ AY +
Sbjct: 279 FYEAWERFKDLLRRCPQHGFQKWVQIEIFYNGLNGQTRTMVDAAAGGILMAKTAEAAYAL 338

Query: 245 LEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKL-SQGSQARASP 304
           L+D+ T SY WP E S   + K  G +E+D ++ L AQ+ASLTN +  L +QG+Q     
Sbjct: 339 LDDIATNSYQWPSERSG--VKKVAGLHEVDPITALAAQVASLTNQIVMLTTQGNQQNVD- 398

Query: 305 PSIVSLVAMANQQEPSELEV-----TNYVDRGQYR------------------------- 359
            S++S  +   + E +  +V      NY  RG Y+                         
Sbjct: 399 -SVISTSSSHQETEVANEQVQYIDSRNYNQRGGYQANHYHPGLRNHENLSYGNNRNTLQP 458

BLAST of ClCG01G011700 vs. NCBI nr
Match: KAG7990634.1 (hypothetical protein I3843_02G035100 [Carya illinoinensis])

HSP 1 Score: 228.4 bits (581), Expect = 1.0e-55
Identity = 152/459 (33.12%), Postives = 233/459 (50.76%), Query Frame = 0

Query: 7   NILPLDSEIERTCRRNLRVQHIHI-EEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNN 66
           +I+P+D EIERT R   R + + + EE  E +P+ ++DY +P +  N   IM  PIN NN
Sbjct: 8   DIIPVDPEIERTLRSLRRNKILAMAEEDREVLPRTLKDYVRPVVNGNYSSIMRQPINANN 67

Query: 67  FELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR 126
           FELKP LI + ++  F G   +DP+ HL  FLEIC TVK+NGV+ D I+LRLFPFSL+D+
Sbjct: 68  FELKPALISMVQQAQFSGSPLDDPNIHLAMFLEICDTVKINGVTEDTIRLRLFPFSLRDK 127

Query: 127 AKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQPYEAWERYKD 186
           A+ WL+++ P SI +                    LR+EIG F+Q + E  YEAWERYKD
Sbjct: 128 ARGWLQSLQPGSIVSWQDMAERFLAKFFPPAKTAQLRSEIGQFKQNDFESLYEAWERYKD 187

Query: 187 LLR---------------------SSTKYILDATTGGSIFSKNAQEAYTILEDLDTTSYN 246
           L+R                       T+ I+DA +GG++ SK A+ A  +LE++ + +Y 
Sbjct: 188 LIRRCPQHGLPDWLQVQMFYNGLNGQTRTIVDAASGGTLMSKTAEGATALLEEMASNNYQ 247

Query: 247 WPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKLS-----QGSQARASPPSIVSL 306
           WP E    +  K  G ++++ ++ L AQ+A+L++ +S L+     Q ++  AS   IV  
Sbjct: 248 WPTE--RTLAKKVAGIHDLEPIAALSAQVATLSHQISALTTQRIPQSTEYLASTSMIVP- 307

Query: 307 VAMANQQEPSELEVTNYVDRGQ-----YR------------------------GFNGAGN 366
              A+Q++   +   NY  RG      Y                         GF+   +
Sbjct: 308 SNEASQEQVQYVNNRNYNYRGNPMPNYYHPGLRNHENLSYGNTKNVLQPQHPPGFDSQPS 367

Query: 367 AKTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN---------------- 373
            +  SLE+ M+ FV+E+ +R    ++ +  I +   + G  I+N                
Sbjct: 368 ERKMSLEDAMVSFVQETNARFKKTDSRLDNIETHCSNMGAAIKNIEVQIGQLATTINAQQ 427

BLAST of ClCG01G011700 vs. NCBI nr
Match: XP_022860306.1 (uncharacterized protein LOC111380876 [Olea europaea var. sylvestris])

HSP 1 Score: 221.9 bits (564), Expect = 9.5e-54
Identity = 153/412 (37.14%), Postives = 207/412 (50.24%), Query Frame = 0

Query: 39  KAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLE 98
           +AIRDY +P +  N  GI +  I  NNFELKPGLIH+ ++  F G   ED + HL SFLE
Sbjct: 16  RAIRDYIRPVVNDNYSGIAHPAIAANNFELKPGLIHMVQQNHFGGAAVEDQNAHLGSFLE 75

Query: 99  ICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITT------------------ 158
           IC TVKMNGV+ DAI+LRLF FSL+D+AK W +++P  SITT                  
Sbjct: 76  ICDTVKMNGVTEDAIRLRLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKS 135

Query: 159 --LRTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDA 218
             L +EI  F+QL+ E  YEAWER+KDLLR                       T+ ++DA
Sbjct: 136 TQLHSEISQFKQLDFEPFYEAWERFKDLLRRCPQHGFQKWMQIEIFYNGLNGQTRTMVDA 195

Query: 219 TTGGSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLT 278
             GG + +K A+ AY +L+D+ T SY WP E S   + K  G +E+D ++ L AQ+ASLT
Sbjct: 196 AAGGILMAKTAEAAYALLDDIATNSYQWPSERSG--VKKVAGFHEVDPITALAAQVASLT 255

Query: 279 NALSKL-SQGSQARASPPSIVSLVAMANQQEPSELEVTNYVD------RGQYRG------ 338
           N +  L +QG+Q +    SI+S  + +NQ+     E   YVD      RG Y+       
Sbjct: 256 NQIVTLTTQGNQQKVD--SIMS-ASSSNQETEVTNEQAQYVDSRNYNQRGSYQANHYHPG 315

Query: 339 ---------------------FNGAGNAKTSSLENIMLDFVKESRSRTTTLENSVQAISS 359
                                FN   +     LE+I+  F+ E+RSR    E     I +
Sbjct: 316 LRNHKNLSYGNNRNTLQPPPEFNTQNSDGKPPLEDILGTFISETRSRFNKNELRWDNIET 375

BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match: A0A6J1DU19 (uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024361 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 157/400 (39.25%), Postives = 218/400 (54.50%), Query Frame = 0

Query: 25  VQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGR 84
           VQ +   ++ +     IRDY QP  P N  GI+N+PIN NN ELKPGLI + RE  FRG 
Sbjct: 11  VQPMERPQLEQNNQMTIRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGN 70

Query: 85  TNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR--AKDWLET-IPPDSITTL 144
             EDP+ HL  FL++CGTVKMNGV +DAI+LRLFP SLQD+   + +L    PP   T L
Sbjct: 71  ATEDPNNHLTIFLDVCGTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQL 130

Query: 145 RTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTG 204
           RTEI +FR+ + EQ +E WERYK+LLR                       T+ ILDA  G
Sbjct: 131 RTEIRSFRKYDYEQLFEVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAG 190

Query: 205 GSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNAL 264
           G++ S+  + AY +L+D+   S+ WP E S+    K  G YE+DE+S LKAQ+ +LTNA+
Sbjct: 191 GTLLSRTPENAYILLKDMADNSFQWPSERSN--AKKVAGMYEIDELSSLKAQVQALTNAV 250

Query: 265 SKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSSLENIM 324
           SKLS    + ++   +V+     +  EP+       +++ Q   F      K SSLE+++
Sbjct: 251 SKLSGPGTSHSN--ELVAATDTYSYYEPT-------IEQAQ---FTSHPAEKKSSLEDLL 310

Query: 325 LDFVKESRSRTTTLENSVQAISSTVQSQG-----------------KTIQNGKFPSCPER 376
             F+ E RSR + +EN V+ +   ++                     T+Q GKFPS  E 
Sbjct: 311 GAFINECRSRASRIENQVEGMEVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEV 370

BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match: A0A3S3N117 (Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01212200 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.2e-47
Identity = 143/471 (30.36%), Postives = 223/471 (47.35%), Query Frame = 0

Query: 5   NTNILPLDSEIERTCRR----NLRVQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVP 64
           N N++PLD EIERT RR      +     I EM E+  +++ DY  P +      I    
Sbjct: 6   NLNLVPLDPEIERTLRRLKKEKKQQSEFEITEMKEQANRSLGDYAVPLVTGATSSIRRPV 65

Query: 65  INVNNFELKPGLIH-IARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFP 124
           I  NNFE+KP +I  +A  + F G  ++DP+ H+ +FLE+C T K NGV++DA++LRL P
Sbjct: 66  IQANNFEIKPAIIQMVASTVQFSGLPDDDPNAHISNFLELCDTFKYNGVTDDAVRLRLLP 125

Query: 125 FSLQDRAKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQPYEA 184
           FSL+D+AK WL ++P  +ITT                    +R +I TF Q E E  YEA
Sbjct: 126 FSLRDKAKAWLNSLPQSTITTWDELAKKFLAKFFPPTKTVKMRNDITTFAQNEMESLYEA 185

Query: 185 WERYKDLLR---------------------SSTKYILDATTGGSIFSKNAQEAYTILEDL 244
           WERYK+LLR                     S+T+  +DA TGG++  K+ +EAY ++E++
Sbjct: 186 WERYKELLRKCPHHGLPLWIQVQTFYNGLQSATRTSIDAATGGTLMKKSPEEAYELVEEM 245

Query: 245 DTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASL--------------TNALSKLS 304
            T +Y WP +       K  G +E+D +S L AQ+A+L              TN + +  
Sbjct: 246 ATNNYQWPSDHVQQ--KKIQGVHELDSISALTAQVANLSKQIQSMKVHAVQSTNMVCEFC 305

Query: 305 QGSQAR-----ASPPSIVSLVAMANQQEPSELEVTNYVDRGQYR----GFNGAGNA---- 364
            G+         +P +    V   +         +N  + G        +N A N+    
Sbjct: 306 AGNHMGVDCQVGNPFNSQEQVHYVSNYSRQNNPYSNTYNPGWRNHPNFSWNNAQNSARQP 365

Query: 365 ---------KTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN-------- 376
                    + S LE +M  F+ +  S+    +N+++   + ++SQG  I+N        
Sbjct: 366 PRFQQPQQEEKSGLEKMMAQFISKVDSKLQDHDNALKCQENELKSQGIAIRNIERTMGQL 425

BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match: A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 153/463 (33.05%), Postives = 222/463 (47.95%), Query Frame = 0

Query: 3   QGNTNILPLDSEIERTCRR----NLRVQHIHIEEMAE--------------EIPKAIRDY 62
           + N N++P D +IERT RR    NL+V  ++ + MAE              E  +A+RDY
Sbjct: 4   RNNLNLVPFDPDIERTFRRHRRENLQVATLN-QTMAEDNNNNGNNAINLVPEANRALRDY 63

Query: 63  FQPTLPANQPGIMNVPINVNNFELKPGLIHIARELV-FRGRTNEDPHKHLRSFLEICGTV 122
             P +      I    IN NNFE+KP  I + +  V F G  ++DP+ HL +FLEIC T 
Sbjct: 64  VVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICDTF 123

Query: 123 KMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITT--------------------LRT 182
           K NGV++DAI+LRLFPFSL+D+AK WL ++P  SITT                    +R 
Sbjct: 124 KYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKMRN 183

Query: 183 EIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTGGS 242
           +I +F Q + E  YEAWER+K+LLR                      S K I+DA  GG+
Sbjct: 184 DITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAGGA 243

Query: 243 IFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSK 302
           + SKNA +AY +LE++ + +Y WP E S     KA G YE+D +  L  Q+A+L+  L  
Sbjct: 244 LMSKNAVDAYNLLEEMASNNYQWPSERSGS--RKAVGAYEIDALGTLTTQVAALSKKLDT 303

Query: 303 L-----------------SQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGF 361
           L                 S            V  V   N+Q+ +    T       +  F
Sbjct: 304 LGVHAVQNSLVVCEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNF 363

BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match: A0A6J0ZYV0 (uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC110413413 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.7e-45
Identity = 117/301 (38.87%), Postives = 162/301 (53.82%), Query Frame = 0

Query: 3   QGNTNILPLDSEIERTCRR----NLRVQHIHIEEMAE--------------EIPKAIRDY 62
           + N N++P D +IERT RR    NL+V  ++ + MAE              E  +A+RDY
Sbjct: 4   RNNLNLVPFDPDIERTFRRHRRENLQVATLN-QTMAEDNNNNGNNAINLVPEANRALRDY 63

Query: 63  FQPTLPANQPGIMNVPINVNNFELKPGLIHIARELV-FRGRTNEDPHKHLRSFLEICGTV 122
             P +      I    IN NNFE+KP  I + +  V F G  ++DP+ HL +FLEIC T 
Sbjct: 64  AVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICDTF 123

Query: 123 KMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITT--------------------LRT 182
           K NGV++DAI+LRLFPFSL+D+AK WL ++P  SITT                    +R 
Sbjct: 124 KYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKMRN 183

Query: 183 EIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTGGS 242
           +I +F Q + E  YEAWER+K+LLR                      S K I+DA  GG+
Sbjct: 184 DITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAGGA 243

Query: 243 IFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSK 244
           + SKNA +AY +LE++ + +Y WP E S     KA G YE+D +  L  Q+A+L+  L  
Sbjct: 244 LMSKNAVDAYNLLEEMASNNYQWPSERSGS--RKAVGAYEIDALGTLTTQVAALSKKLDT 301

BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match: A0A2I4F4C8 (uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-42
Identity = 124/394 (31.47%), Postives = 188/394 (47.72%), Query Frame = 0

Query: 38  PKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFL 97
           P+ ++DY +P +  N  GI    IN NNFELKP LI + ++  F     +DP+ HL  FL
Sbjct: 10  PRTLKDYVRPVVNDNYSGIRRQTINANNFELKPALISMVQQAQFSRSPLDDPNIHLAMFL 69

Query: 98  EICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETI--------------------PPDS 157
            IC TVK+NGV+ D I+LRLFPFSL+D+A+ WL+++                    PP  
Sbjct: 70  LICDTVKINGVTGDTIRLRLFPFSLRDKARGWLQSLQLGSITSWQDMAEKFLAKFFPPAK 129

Query: 158 ITTLRTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILD 217
            T LR+EI  F+Q + E  YEAWERYK L+R                       T+ I+D
Sbjct: 130 TTQLRSEISQFKQNDFESLYEAWERYKYLIRCCPQHGLPNWLQVQMFYNGLNGKTRTIVD 189

Query: 218 ATTGGSIFSKNAQEAYT-ILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLAS 277
           A  GG++ SK  + A T +LE++ + +Y WP E    +  K  G +    +S L  Q   
Sbjct: 190 AAAGGTLMSKTIEGAATYLLEEMTSNNYQWPTE--KTMAKKVPGIH----ISALTTQRIQ 249

Query: 278 LTNALSKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSS 337
              A S +   ++              A+Q++   +   NY     YRGF+   + K  S
Sbjct: 250 YVAATSMIVPSNE--------------ASQEQVQYINNRNY----NYRGFDSQQSKKNMS 309

Query: 338 LENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN-----------------GKFP 373
           LE+ ++ FV+E+ +R    ++ +  I +   + G  I+N                 G FP
Sbjct: 310 LEDAIISFVEETNARFKKTDSLLDNIDAHCSNMGAAIKNIEVQIGKLATIINAQQRGTFP 369

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
WP_217833153.13.6e-15466.81retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... [more]
XP_022157708.12.3e-6039.25uncharacterized protein LOC111024361 [Momordica charantia][more]
XP_022843226.13.5e-5636.12uncharacterized protein LOC111366761 [Olea europaea var. sylvestris][more]
KAG7990634.11.0e-5533.12hypothetical protein I3843_02G035100 [Carya illinoinensis][more]
XP_022860306.19.5e-5437.14uncharacterized protein LOC111380876 [Olea europaea var. sylvestris][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU191.1e-6039.25uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A3S3N1173.2e-4730.36Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae O... [more]
A0A6J0ZX641.6e-4633.05LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... [more]
A0A6J0ZYV06.7e-4538.87uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC11041... [more]
A0A2I4F4C81.4e-4231.47uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..375

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G011700.1ClCG01G011700.1mRNA