Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAAGGCAATACTAATATTCTGCCTCTTGATTCCGAGATTGAAAGGACGTGTAGAAGGAATCTAAGGGTTCAACACATTCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCGGGACTACTTCCAACCGACATTACCGGCAAATCAACCCGGAATAATGAATGTACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATTCACATAGCTAGAGAGCTAGTCTTCAGAGGAAGAACCAATGAAGATCCTCACAAGCACCTACGATCTTTCTTGGAGATATGCGGGACGGTAAAGATGAATGGCGTTTCTAACGATGCAATTAAACTAAGACTTTTCCCTTTCTCTTTACAGGACCGTGCTAAGGATTGGTTGGAAACCATCCCTCCAGATAGCATTACAACGTGGGAATCTTAGCTCAAGCTTTCTTGAACAAGTACTTTCCACCGGTTAAATCTCAAAGACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAACCTTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGAAGGTGCCCTCAACACGATTACCCGGATTGATTGCAAATTCAACTCTTCTATAATGGATTATCAAGCTCAACCAAATACATTCTAGATGCAACCACCGGAGGCTCAATTTTTTCAAAGAATGCTCAAGAGGCATATACCATACTAGAAGACTTGGACACTACATCGTACAACTGGCCATGCGAATGGTCTTCTCCAATCATCCCAAAAGCCACCGGACGATATGAGATGGACGAGGTAAGTTTTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCGAGCAAGTCCACCATCAATAGTTTCCCTTGTGGCCATGGCAAATCAACAAGAGCCTAGTGAGTTAGAAGTGACCAATTATGTAGATAGAGGACAATACCGAGGTCAACAATAACTCCCGACTCACTATCATCCCAACTTGAGGAATCACGAGAGCTTTTCATATGCCAACAACAAGAATGTGTTGCAAGCACCTCTAGGATTCAATGGAGCGGGAAATGCAAAGACATCATCACTAGAGAACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCCAAGCTATTTCAAGTACCGTTCAGAGCCAAGGTAAGACAATTCAAAATGGTAAGTTCCCTAGTTGCCCAGAGAGAAACCCGAAGGAGGAATCCAAGGTCGTGATTTTGAGGAGTGGGAAAAAGCTATCCACTCCCTTGATAAATGATGAAGATGATGAACCCCCACAAGAATAG
mRNA sequence
ATGCCTCAAGGCAATACTAATATTCTGCCTCTTGATTCCGAGATTGAAAGGACGTGTAGAAGGAATCTAAGGGTTCAACACATTCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCGGGACTACTTCCAACCGACATTACCGGCAAATCAACCCGGAATAATGAATGTACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATTCACATAGCTAGAGAGCTAGTCTTCAGAGGAAGAACCAATGAAGATCCTCACAAGCACCTACGATCTTTCTTGGAGATATGCGGGACGGTAAAGATGAATGGCGTTTCTAACGATGCAATTAAACTAAGACTTTTCCCTTTCTCTTTACAGGACCGTGCTAAGGATTGGTTGGAAACCATCCCTCCAGATAGCATTACAACACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAACCTTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGAAGCTCAACCAAATACATTCTAGATGCAACCACCGGAGGCTCAATTTTTTCAAAGAATGCTCAAGAGGCATATACCATACTAGAAGACTTGGACACTACATCGTACAACTGGCCATGCGAATGGTCTTCTCCAATCATCCCAAAAGCCACCGGACGATATGAGATGGACGAGGTAAGTTTTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCGAGCAAGTCCACCATCAATAGTTTCCCTTGTGGCCATGGCAAATCAACAAGAGCCTAGTGAGTTAGAAGTGACCAATTATGTAGATAGAGGACAATACCGAGGATTCAATGGAGCGGGAAATGCAAAGACATCATCACTAGAGAACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCCAAGCTATTTCAAGTACCGTTCAGAGCCAAGGTAAGACAATTCAAAATGGTAAGTTCCCTAGTTGCCCAGAGAGAAACCCGAAGGAGGAATCCAAGGTCGTGATTTTGAGGAGTGGGAAAAAGCTATCCACTCCCTTGATAAATGATGAAGATGATGAACCCCCACAAGAATAG
Coding sequence (CDS)
ATGCCTCAAGGCAATACTAATATTCTGCCTCTTGATTCCGAGATTGAAAGGACGTGTAGAAGGAATCTAAGGGTTCAACACATTCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCGGGACTACTTCCAACCGACATTACCGGCAAATCAACCCGGAATAATGAATGTACCCATCAATGTCAACAACTTTGAGTTGAAACCGGGGTTGATTCACATAGCTAGAGAGCTAGTCTTCAGAGGAAGAACCAATGAAGATCCTCACAAGCACCTACGATCTTTCTTGGAGATATGCGGGACGGTAAAGATGAATGGCGTTTCTAACGATGCAATTAAACTAAGACTTTTCCCTTTCTCTTTACAGGACCGTGCTAAGGATTGGTTGGAAACCATCCCTCCAGATAGCATTACAACACTAAGGACGGAGATTGGAACATTCCGCCAACTTGAGGATGAACAACCTTATGAGGCTTGGGAGAGGTACAAGGATCTCTTGAGAAGCTCAACCAAATACATTCTAGATGCAACCACCGGAGGCTCAATTTTTTCAAAGAATGCTCAAGAGGCATATACCATACTAGAAGACTTGGACACTACATCGTACAACTGGCCATGCGAATGGTCTTCTCCAATCATCCCAAAAGCCACCGGACGATATGAGATGGACGAGGTAAGTTTTCTAAAAGCTCAATTGGCTTCTCTCACTAATGCTTTATCTAAATTGTCTCAAGGAAGCCAAGCTCGAGCAAGTCCACCATCAATAGTTTCCCTTGTGGCCATGGCAAATCAACAAGAGCCTAGTGAGTTAGAAGTGACCAATTATGTAGATAGAGGACAATACCGAGGATTCAATGGAGCGGGAAATGCAAAGACATCATCACTAGAGAACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCCAAGCTATTTCAAGTACCGTTCAGAGCCAAGGTAAGACAATTCAAAATGGTAAGTTCCCTAGTTGCCCAGAGAGAAACCCGAAGGAGGAATCCAAGGTCGTGATTTTGAGGAGTGGGAAAAAGCTATCCACTCCCTTGATAAATGATGAAGATGATGAACCCCCACAAGAATAG
Protein sequence
MPQGNTNILPLDSEIERTCRRNLRVQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITTLRTEIGTFRQLEDEQPYEAWERYKDLLRSSTKYILDATTGGSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQNGKFPSCPERNPKEESKVVILRSGKKLSTPLINDEDDEPPQE
Homology
BLAST of ClCG01G011700 vs. NCBI nr
Match:
WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 555.4 bits (1430), Expect = 3.6e-154
Identity = 310/464 (66.81%), Postives = 331/464 (71.34%), Query Frame = 0
Query: 1 MPQGNTNILPLDSEIERTCRRNLRVQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVP 60
MP+ NTN+LPLD EI+RT RRNLR EMAEEIPKAIRDYFQPTLPA+QPGIMNVP
Sbjct: 17 MPRDNTNLLPLDPEIDRTYRRNLRALLNQTTEMAEEIPKAIRDYFQPTLPASQPGIMNVP 76
Query: 61 INVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPF 120
INVNNFELKPGLI +AREL FRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPF
Sbjct: 77 INVNNFELKPGLIQMARELAFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPF 136
Query: 121 SLQDRAKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQPYEAW 180
SLQDRAKDWLETIPPDSITT LRTEIGTFRQLEDEQ YEAW
Sbjct: 137 SLQDRAKDWLETIPPDSITTWEILAQAFLNKYFPPAKSQRLRTEIGTFRQLEDEQLYEAW 196
Query: 181 ERYKDLLR---------------------SSTKYILDATTGGSIFSKNAQEAYTILEDLD 240
ERYKDLLR SSTK ILDAT GGSIFSKNAQEAYTILEDL
Sbjct: 197 ERYKDLLRRCPQHGYPDWLQIQLFYNGLASSTKSILDATAGGSIFSKNAQEAYTILEDLA 256
Query: 241 TTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKLSQGSQARASPPSIVSL 300
TTSYNWPCE +SP IPKA G YE+DEV+ LKAQ+ASLTNALSKL+ G QA+ +PPSI SL
Sbjct: 257 TTSYNWPCERASPNIPKAAGLYEVDEVNSLKAQMASLTNALSKLTAGGQAQTNPPSIASL 316
Query: 301 VAMANQQ-EPSELEVTNYVDRGQYR----------------------------------G 360
A+A++ + E NYVDRG YR G
Sbjct: 317 AALASEMGVHGDNETANYVDRGHYRNYQHQQLPTHYHPNLRNHENFSYANNKNVLQAPQG 376
Query: 361 FNGAGNAKTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN---------- 372
FNGAGNAKTSSLE+IMLDFVKESRSRTTTLENSVQAI+STVQSQGK +QN
Sbjct: 377 FNGAGNAKTSSLEDIMLDFVKESRSRTTTLENSVQAIASTVQSQGKALQNLEVQLSQMKT 436
BLAST of ClCG01G011700 vs. NCBI nr
Match:
XP_022157708.1 (uncharacterized protein LOC111024361 [Momordica charantia])
HSP 1 Score: 243.8 bits (621), Expect = 2.3e-60
Identity = 157/400 (39.25%), Postives = 218/400 (54.50%), Query Frame = 0
Query: 25 VQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGR 84
VQ + ++ + IRDY QP P N GI+N+PIN NN ELKPGLI + RE FRG
Sbjct: 11 VQPMERPQLEQNNQMTIRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGN 70
Query: 85 TNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR--AKDWLET-IPPDSITTL 144
EDP+ HL FL++CGTVKMNGV +DAI+LRLFP SLQD+ + +L PP T L
Sbjct: 71 ATEDPNNHLTIFLDVCGTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQL 130
Query: 145 RTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTG 204
RTEI +FR+ + EQ +E WERYK+LLR T+ ILDA G
Sbjct: 131 RTEIRSFRKYDYEQLFEVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAG 190
Query: 205 GSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNAL 264
G++ S+ + AY +L+D+ S+ WP E S+ K G YE+DE+S LKAQ+ +LTNA+
Sbjct: 191 GTLLSRTPENAYILLKDMADNSFQWPSERSN--AKKVAGMYEIDELSSLKAQVQALTNAV 250
Query: 265 SKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSSLENIM 324
SKLS + ++ +V+ + EP+ +++ Q F K SSLE+++
Sbjct: 251 SKLSGPGTSHSN--ELVAATDTYSYYEPT-------IEQAQ---FTSHPAEKKSSLEDLL 310
Query: 325 LDFVKESRSRTTTLENSVQAISSTVQSQG-----------------KTIQNGKFPSCPER 376
F+ E RSR + +EN V+ + ++ T+Q GKFPS E
Sbjct: 311 GAFINECRSRASRIENQVEGMEVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEV 370
BLAST of ClCG01G011700 vs. NCBI nr
Match:
XP_022843226.1 (uncharacterized protein LOC111366761 [Olea europaea var. sylvestris])
HSP 1 Score: 229.9 bits (585), Expect = 3.5e-56
Identity = 164/454 (36.12%), Postives = 222/454 (48.90%), Query Frame = 0
Query: 5 NTNILPLDSEIERTCRRNLRVQHIHIEEMAEE---------IPKAIRDYFQPTLPANQPG 64
N ++L +D E ERT R +Q E MAE+ +AIRDY +P + N G
Sbjct: 99 NLDLLHVDPEPERTFRILRGIQRNEREAMAEQDVRAANEDNQQRAIRDYIRPVVNDNYSG 158
Query: 65 IMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKL 124
I I NFELKPGLI + ++ F G EDP+ HL SFLEIC TVKMNGV+ DAI+L
Sbjct: 159 IARPAIVAKNFELKPGLIDMVQQNQFGGAAVEDPNAHLGSFLEICDTVKMNGVTEDAIRL 218
Query: 125 RLFPFSLQDRAKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQ 184
RLF FSL+D+AK W +++P SITT LR EI F+QL+ E
Sbjct: 219 RLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKSAQLRGEISQFKQLDFEP 278
Query: 185 PYEAWERYKDLLR---------------------SSTKYILDATTGGSIFSKNAQEAYTI 244
YEAWER+KDLLR T+ ++DA GG + +K A+ AY +
Sbjct: 279 FYEAWERFKDLLRRCPQHGFQKWVQIEIFYNGLNGQTRTMVDAAAGGILMAKTAEAAYAL 338
Query: 245 LEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKL-SQGSQARASP 304
L+D+ T SY WP E S + K G +E+D ++ L AQ+ASLTN + L +QG+Q
Sbjct: 339 LDDIATNSYQWPSERSG--VKKVAGLHEVDPITALAAQVASLTNQIVMLTTQGNQQNVD- 398
Query: 305 PSIVSLVAMANQQEPSELEV-----TNYVDRGQYR------------------------- 359
S++S + + E + +V NY RG Y+
Sbjct: 399 -SVISTSSSHQETEVANEQVQYIDSRNYNQRGGYQANHYHPGLRNHENLSYGNNRNTLQP 458
BLAST of ClCG01G011700 vs. NCBI nr
Match:
KAG7990634.1 (hypothetical protein I3843_02G035100 [Carya illinoinensis])
HSP 1 Score: 228.4 bits (581), Expect = 1.0e-55
Identity = 152/459 (33.12%), Postives = 233/459 (50.76%), Query Frame = 0
Query: 7 NILPLDSEIERTCRRNLRVQHIHI-EEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNN 66
+I+P+D EIERT R R + + + EE E +P+ ++DY +P + N IM PIN NN
Sbjct: 8 DIIPVDPEIERTLRSLRRNKILAMAEEDREVLPRTLKDYVRPVVNGNYSSIMRQPINANN 67
Query: 67 FELKPGLIHIARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR 126
FELKP LI + ++ F G +DP+ HL FLEIC TVK+NGV+ D I+LRLFPFSL+D+
Sbjct: 68 FELKPALISMVQQAQFSGSPLDDPNIHLAMFLEICDTVKINGVTEDTIRLRLFPFSLRDK 127
Query: 127 AKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQPYEAWERYKD 186
A+ WL+++ P SI + LR+EIG F+Q + E YEAWERYKD
Sbjct: 128 ARGWLQSLQPGSIVSWQDMAERFLAKFFPPAKTAQLRSEIGQFKQNDFESLYEAWERYKD 187
Query: 187 LLR---------------------SSTKYILDATTGGSIFSKNAQEAYTILEDLDTTSYN 246
L+R T+ I+DA +GG++ SK A+ A +LE++ + +Y
Sbjct: 188 LIRRCPQHGLPDWLQVQMFYNGLNGQTRTIVDAASGGTLMSKTAEGATALLEEMASNNYQ 247
Query: 247 WPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSKLS-----QGSQARASPPSIVSL 306
WP E + K G ++++ ++ L AQ+A+L++ +S L+ Q ++ AS IV
Sbjct: 248 WPTE--RTLAKKVAGIHDLEPIAALSAQVATLSHQISALTTQRIPQSTEYLASTSMIVP- 307
Query: 307 VAMANQQEPSELEVTNYVDRGQ-----YR------------------------GFNGAGN 366
A+Q++ + NY RG Y GF+ +
Sbjct: 308 SNEASQEQVQYVNNRNYNYRGNPMPNYYHPGLRNHENLSYGNTKNVLQPQHPPGFDSQPS 367
Query: 367 AKTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN---------------- 373
+ SLE+ M+ FV+E+ +R ++ + I + + G I+N
Sbjct: 368 ERKMSLEDAMVSFVQETNARFKKTDSRLDNIETHCSNMGAAIKNIEVQIGQLATTINAQQ 427
BLAST of ClCG01G011700 vs. NCBI nr
Match:
XP_022860306.1 (uncharacterized protein LOC111380876 [Olea europaea var. sylvestris])
HSP 1 Score: 221.9 bits (564), Expect = 9.5e-54
Identity = 153/412 (37.14%), Postives = 207/412 (50.24%), Query Frame = 0
Query: 39 KAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFLE 98
+AIRDY +P + N GI + I NNFELKPGLIH+ ++ F G ED + HL SFLE
Sbjct: 16 RAIRDYIRPVVNDNYSGIAHPAIAANNFELKPGLIHMVQQNHFGGAAVEDQNAHLGSFLE 75
Query: 99 ICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITT------------------ 158
IC TVKMNGV+ DAI+LRLF FSL+D+AK W +++P SITT
Sbjct: 76 ICDTVKMNGVTEDAIRLRLFSFSLRDKAKAWFQSLPYGSITTWDDLAQKFLTKYFPPSKS 135
Query: 159 --LRTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDA 218
L +EI F+QL+ E YEAWER+KDLLR T+ ++DA
Sbjct: 136 TQLHSEISQFKQLDFEPFYEAWERFKDLLRRCPQHGFQKWMQIEIFYNGLNGQTRTMVDA 195
Query: 219 TTGGSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLT 278
GG + +K A+ AY +L+D+ T SY WP E S + K G +E+D ++ L AQ+ASLT
Sbjct: 196 AAGGILMAKTAEAAYALLDDIATNSYQWPSERSG--VKKVAGFHEVDPITALAAQVASLT 255
Query: 279 NALSKL-SQGSQARASPPSIVSLVAMANQQEPSELEVTNYVD------RGQYRG------ 338
N + L +QG+Q + SI+S + +NQ+ E YVD RG Y+
Sbjct: 256 NQIVTLTTQGNQQKVD--SIMS-ASSSNQETEVTNEQAQYVDSRNYNQRGSYQANHYHPG 315
Query: 339 ---------------------FNGAGNAKTSSLENIMLDFVKESRSRTTTLENSVQAISS 359
FN + LE+I+ F+ E+RSR E I +
Sbjct: 316 LRNHKNLSYGNNRNTLQPPPEFNTQNSDGKPPLEDILGTFISETRSRFNKNELRWDNIET 375
BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match:
A0A6J1DU19 (uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024361 PE=4 SV=1)
HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 157/400 (39.25%), Postives = 218/400 (54.50%), Query Frame = 0
Query: 25 VQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGR 84
VQ + ++ + IRDY QP P N GI+N+PIN NN ELKPGLI + RE FRG
Sbjct: 11 VQPMERPQLEQNNQMTIRDYCQPNFP-NHVGIINLPINANNSELKPGLIQMVRENTFRGN 70
Query: 85 TNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFPFSLQDR--AKDWLET-IPPDSITTL 144
EDP+ HL FL++CGTVKMNGV +DAI+LRLFP SLQD+ + +L PP T L
Sbjct: 71 ATEDPNNHLTIFLDVCGTVKMNGVIDDAIRLRLFPLSLQDKEMVQAFLTNFFPPAKTTQL 130
Query: 145 RTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTG 204
RTEI +FR+ + EQ +E WERYK+LLR T+ ILDA G
Sbjct: 131 RTEIRSFRKYDYEQLFEVWERYKELLRKCPQHGNLEWLQIQMFYNGLNGQTRTILDAAAG 190
Query: 205 GSIFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNAL 264
G++ S+ + AY +L+D+ S+ WP E S+ K G YE+DE+S LKAQ+ +LTNA+
Sbjct: 191 GTLLSRTPENAYILLKDMADNSFQWPSERSN--AKKVAGMYEIDELSSLKAQVQALTNAV 250
Query: 265 SKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSSLENIM 324
SKLS + ++ +V+ + EP+ +++ Q F K SSLE+++
Sbjct: 251 SKLSGPGTSHSN--ELVAATDTYSYYEPT-------IEQAQ---FTSHPAEKKSSLEDLL 310
Query: 325 LDFVKESRSRTTTLENSVQAISSTVQSQG-----------------KTIQNGKFPSCPER 376
F+ E RSR + +EN V+ + ++ T+Q GKFPS E
Sbjct: 311 GAFINECRSRASRIENQVEGMEVKLEGNTTSIKNMEVQIGQIAPTLNTMQKGKFPSDIEV 370
BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match:
A0A3S3N117 (Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01212200 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 3.2e-47
Identity = 143/471 (30.36%), Postives = 223/471 (47.35%), Query Frame = 0
Query: 5 NTNILPLDSEIERTCRR----NLRVQHIHIEEMAEEIPKAIRDYFQPTLPANQPGIMNVP 64
N N++PLD EIERT RR + I EM E+ +++ DY P + I
Sbjct: 6 NLNLVPLDPEIERTLRRLKKEKKQQSEFEITEMKEQANRSLGDYAVPLVTGATSSIRRPV 65
Query: 65 INVNNFELKPGLIH-IARELVFRGRTNEDPHKHLRSFLEICGTVKMNGVSNDAIKLRLFP 124
I NNFE+KP +I +A + F G ++DP+ H+ +FLE+C T K NGV++DA++LRL P
Sbjct: 66 IQANNFEIKPAIIQMVASTVQFSGLPDDDPNAHISNFLELCDTFKYNGVTDDAVRLRLLP 125
Query: 125 FSLQDRAKDWLETIPPDSITT--------------------LRTEIGTFRQLEDEQPYEA 184
FSL+D+AK WL ++P +ITT +R +I TF Q E E YEA
Sbjct: 126 FSLRDKAKAWLNSLPQSTITTWDELAKKFLAKFFPPTKTVKMRNDITTFAQNEMESLYEA 185
Query: 185 WERYKDLLR---------------------SSTKYILDATTGGSIFSKNAQEAYTILEDL 244
WERYK+LLR S+T+ +DA TGG++ K+ +EAY ++E++
Sbjct: 186 WERYKELLRKCPHHGLPLWIQVQTFYNGLQSATRTSIDAATGGTLMKKSPEEAYELVEEM 245
Query: 245 DTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASL--------------TNALSKLS 304
T +Y WP + K G +E+D +S L AQ+A+L TN + +
Sbjct: 246 ATNNYQWPSDHVQQ--KKIQGVHELDSISALTAQVANLSKQIQSMKVHAVQSTNMVCEFC 305
Query: 305 QGSQAR-----ASPPSIVSLVAMANQQEPSELEVTNYVDRGQYR----GFNGAGNA---- 364
G+ +P + V + +N + G +N A N+
Sbjct: 306 AGNHMGVDCQVGNPFNSQEQVHYVSNYSRQNNPYSNTYNPGWRNHPNFSWNNAQNSARQP 365
Query: 365 ---------KTSSLENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN-------- 376
+ S LE +M F+ + S+ +N+++ + ++SQG I+N
Sbjct: 366 PRFQQPQQEEKSGLEKMMAQFISKVDSKLQDHDNALKCQENELKSQGIAIRNIERTMGQL 425
BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match:
A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 153/463 (33.05%), Postives = 222/463 (47.95%), Query Frame = 0
Query: 3 QGNTNILPLDSEIERTCRR----NLRVQHIHIEEMAE--------------EIPKAIRDY 62
+ N N++P D +IERT RR NL+V ++ + MAE E +A+RDY
Sbjct: 4 RNNLNLVPFDPDIERTFRRHRRENLQVATLN-QTMAEDNNNNGNNAINLVPEANRALRDY 63
Query: 63 FQPTLPANQPGIMNVPINVNNFELKPGLIHIARELV-FRGRTNEDPHKHLRSFLEICGTV 122
P + I IN NNFE+KP I + + V F G ++DP+ HL +FLEIC T
Sbjct: 64 VVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICDTF 123
Query: 123 KMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITT--------------------LRT 182
K NGV++DAI+LRLFPFSL+D+AK WL ++P SITT +R
Sbjct: 124 KYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKMRN 183
Query: 183 EIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTGGS 242
+I +F Q + E YEAWER+K+LLR S K I+DA GG+
Sbjct: 184 DITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAGGA 243
Query: 243 IFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSK 302
+ SKNA +AY +LE++ + +Y WP E S KA G YE+D + L Q+A+L+ L
Sbjct: 244 LMSKNAVDAYNLLEEMASNNYQWPSERSGS--RKAVGAYEIDALGTLTTQVAALSKKLDT 303
Query: 303 L-----------------SQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGF 361
L S V V N+Q+ + T + F
Sbjct: 304 LGVHAVQNSLVVCEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNF 363
BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match:
A0A6J0ZYV0 (uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC110413413 PE=4 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 6.7e-45
Identity = 117/301 (38.87%), Postives = 162/301 (53.82%), Query Frame = 0
Query: 3 QGNTNILPLDSEIERTCRR----NLRVQHIHIEEMAE--------------EIPKAIRDY 62
+ N N++P D +IERT RR NL+V ++ + MAE E +A+RDY
Sbjct: 4 RNNLNLVPFDPDIERTFRRHRRENLQVATLN-QTMAEDNNNNGNNAINLVPEANRALRDY 63
Query: 63 FQPTLPANQPGIMNVPINVNNFELKPGLIHIARELV-FRGRTNEDPHKHLRSFLEICGTV 122
P + I IN NNFE+KP I + + V F G ++DP+ HL +FLEIC T
Sbjct: 64 AVPLVQGLHQSIRRPSINANNFEIKPAYIQMIQSSVQFSGLPSDDPNSHLVNFLEICDTF 123
Query: 123 KMNGVSNDAIKLRLFPFSLQDRAKDWLETIPPDSITT--------------------LRT 182
K NGV++DAI+LRLFPFSL+D+AK WL ++P SITT +R
Sbjct: 124 KYNGVTDDAIRLRLFPFSLRDKAKSWLNSLPNGSITTWEDLAQKFLAKFFPPAKTAKMRN 183
Query: 183 EIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILDATTGGS 242
+I +F Q + E YEAWER+K+LLR S K I+DA GG+
Sbjct: 184 DITSFIQFDGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAGGA 243
Query: 243 IFSKNAQEAYTILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLASLTNALSK 244
+ SKNA +AY +LE++ + +Y WP E S KA G YE+D + L Q+A+L+ L
Sbjct: 244 LMSKNAVDAYNLLEEMASNNYQWPSERSGS--RKAVGAYEIDALGTLTTQVAALSKKLDT 301
BLAST of ClCG01G011700 vs. ExPASy TrEMBL
Match:
A0A2I4F4C8 (uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 1.4e-42
Identity = 124/394 (31.47%), Postives = 188/394 (47.72%), Query Frame = 0
Query: 38 PKAIRDYFQPTLPANQPGIMNVPINVNNFELKPGLIHIARELVFRGRTNEDPHKHLRSFL 97
P+ ++DY +P + N GI IN NNFELKP LI + ++ F +DP+ HL FL
Sbjct: 10 PRTLKDYVRPVVNDNYSGIRRQTINANNFELKPALISMVQQAQFSRSPLDDPNIHLAMFL 69
Query: 98 EICGTVKMNGVSNDAIKLRLFPFSLQDRAKDWLETI--------------------PPDS 157
IC TVK+NGV+ D I+LRLFPFSL+D+A+ WL+++ PP
Sbjct: 70 LICDTVKINGVTGDTIRLRLFPFSLRDKARGWLQSLQLGSITSWQDMAEKFLAKFFPPAK 129
Query: 158 ITTLRTEIGTFRQLEDEQPYEAWERYKDLLR---------------------SSTKYILD 217
T LR+EI F+Q + E YEAWERYK L+R T+ I+D
Sbjct: 130 TTQLRSEISQFKQNDFESLYEAWERYKYLIRCCPQHGLPNWLQVQMFYNGLNGKTRTIVD 189
Query: 218 ATTGGSIFSKNAQEAYT-ILEDLDTTSYNWPCEWSSPIIPKATGRYEMDEVSFLKAQLAS 277
A GG++ SK + A T +LE++ + +Y WP E + K G + +S L Q
Sbjct: 190 AAAGGTLMSKTIEGAATYLLEEMTSNNYQWPTE--KTMAKKVPGIH----ISALTTQRIQ 249
Query: 278 LTNALSKLSQGSQARASPPSIVSLVAMANQQEPSELEVTNYVDRGQYRGFNGAGNAKTSS 337
A S + ++ A+Q++ + NY YRGF+ + K S
Sbjct: 250 YVAATSMIVPSNE--------------ASQEQVQYINNRNY----NYRGFDSQQSKKNMS 309
Query: 338 LENIMLDFVKESRSRTTTLENSVQAISSTVQSQGKTIQN-----------------GKFP 373
LE+ ++ FV+E+ +R ++ + I + + G I+N G FP
Sbjct: 310 LEDAIISFVEETNARFKKTDSLLDNIDAHCSNMGAAIKNIEVQIGKLATIINAQQRGTFP 369
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
WP_217833153.1 | 3.6e-154 | 66.81 | retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... | [more] |
XP_022157708.1 | 2.3e-60 | 39.25 | uncharacterized protein LOC111024361 [Momordica charantia] | [more] |
XP_022843226.1 | 3.5e-56 | 36.12 | uncharacterized protein LOC111366761 [Olea europaea var. sylvestris] | [more] |
KAG7990634.1 | 1.0e-55 | 33.12 | hypothetical protein I3843_02G035100 [Carya illinoinensis] | [more] |
XP_022860306.1 | 9.5e-54 | 37.14 | uncharacterized protein LOC111380876 [Olea europaea var. sylvestris] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU19 | 1.1e-60 | 39.25 | uncharacterized protein LOC111024361 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A3S3N117 | 3.2e-47 | 30.36 | Retrotrans_gag domain-containing protein OS=Cinnamomum micranthum f. kanehirae O... | [more] |
A0A6J0ZX64 | 1.6e-46 | 33.05 | LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... | [more] |
A0A6J0ZYV0 | 6.7e-45 | 38.87 | uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC11041... | [more] |
A0A2I4F4C8 | 1.4e-42 | 31.47 | uncharacterized protein LOC108995373 OS=Juglans regia OX=51240 GN=LOC108995373 P... | [more] |
Match Name | E-value | Identity | Description | |