ClCG01G011630 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG01G011630
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr01: 19473524 .. 19474024 (-)
RNA-Seq ExpressionClCG01G011630
SyntenyClCG01G011630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAACGTTAACGACGATCCTCAACTTCTTCCTAAAACCTCCATTCCTAATCATTCCCTCATGAAATCAACCATCGAGTCTGCCTATGTGAAAAAGGACGCTGATGCGTATGAAGTTAGATCTGGAACTTGCCCAGTCAGCACCCTTGCTTTCGCCAACTTGTTGAATCAAGTGACTTCCACCAAAATGGATGGCAACAACTTTTTATTGTGGCAGAATATTGCTTTCCCAATCCTTTGGAGTTACAAACTTGAAAGACACCTCACTCGTAAAGATGTTTGTCCTGAAATGTCTATTATACTTCCTCCCTTAGAAGACGAACCACAGGGTTTATTACTTCTGAATCCCGAATATGATATTTGGATAGCTATTGATCAGCTTCTCGTTGGGTGGTTATATAACTCGATGACAATAAAAGTGGCTTCTCAACTCACTAGGCATGATACAACAAAGGGACTGTGGGAGGCGCTGTTCTATGGGCTTCAAGCCTCATCTTAA

mRNA sequence

ATGACCAACGTTAACGACGATCCTCAACTTCTTCCTAAAACCTCCATTCCTAATCATTCCCTCATGAAATCAACCATCGAGTCTGCCTATGTGAAAAAGGACGCTGATGCGTATGAAGTTAGATCTGGAACTTGCCCAGTCAGCACCCTTGCTTTCGCCAACTTGTTGAATCAAGTGACTTCCACCAAAATGGATGGCAACAACTTTTTATTGTGGCAGAATATTGCTTTCCCAATCCTTTGGAGTTACAAACTTGAAAGACACCTCACTCGTAAAGATGTTTGTCCTGAAATGTCTATTATACTTCCTCCCTTAGAAGACGAACCACAGGGTTTATTACTTCTGAATCCCGAATATGATATTTGGATAGCTATTGATCAGCTTCTCGTTGGGTGGTTATATAACTCGATGACAATAAAAGTGGCTTCTCAACTCACTAGGCATGATACAACAAAGGGACTGTGGGAGGCGCTGTTCTATGGGCTTCAAGCCTCATCTTAA

Coding sequence (CDS)

ATGACCAACGTTAACGACGATCCTCAACTTCTTCCTAAAACCTCCATTCCTAATCATTCCCTCATGAAATCAACCATCGAGTCTGCCTATGTGAAAAAGGACGCTGATGCGTATGAAGTTAGATCTGGAACTTGCCCAGTCAGCACCCTTGCTTTCGCCAACTTGTTGAATCAAGTGACTTCCACCAAAATGGATGGCAACAACTTTTTATTGTGGCAGAATATTGCTTTCCCAATCCTTTGGAGTTACAAACTTGAAAGACACCTCACTCGTAAAGATGTTTGTCCTGAAATGTCTATTATACTTCCTCCCTTAGAAGACGAACCACAGGGTTTATTACTTCTGAATCCCGAATATGATATTTGGATAGCTATTGATCAGCTTCTCGTTGGGTGGTTATATAACTCGATGACAATAAAAGTGGCTTCTCAACTCACTAGGCATGATACAACAAAGGGACTGTGGGAGGCGCTGTTCTATGGGCTTCAAGCCTCATCTTAA

Protein sequence

MTNVNDDPQLLPKTSIPNHSLMKSTIESAYVKKDADAYEVRSGTCPVSTLAFANLLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMSIILPPLEDEPQGLLLLNPEYDIWIAIDQLLVGWLYNSMTIKVASQLTRHDTTKGLWEALFYGLQASS
Homology
BLAST of ClCG01G011630 vs. NCBI nr
Match: XP_031745012.1 (uncharacterized protein LOC116405217 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-20
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 0

Query: 40  VRSGTCPVSTLAFANLLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMS 99
           + S T   S      +LNQ+ S K+D  N+LLWQ +A PIL SYKL+ HLT ++ CP   
Sbjct: 8   IGSSTTNFSNPPLNQILNQLASVKLDRGNYLLWQTLALPILKSYKLQGHLTEENQCPPKF 67

Query: 100 IILPPLEDEPQGLL--LLNPEYDIWIAIDQLLVGWLYNSMTIKVASQLTRHDTTKGLWEA 159
           II P      +      +NP++D W+  D LL+GW+YNSMT +VA QL   +T K LWEA
Sbjct: 68  IINPTCGASSRSTTTKTVNPKFDQWVTFDLLLLGWMYNSMTPEVALQLMGFNTAKDLWEA 127

Query: 160 L--FYGLQ 164
           +   +G+Q
Sbjct: 128 IQDLFGVQ 135

BLAST of ClCG01G011630 vs. NCBI nr
Match: XP_038887015.1 (uncharacterized protein LOC120077182 [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-19
Identity = 54/133 (40.60%), Postives = 78/133 (58.65%), Query Frame = 0

Query: 48  STLAFANLLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMSII--LPPL 107
           ST     LLNQ+T+TK++   F+LW+ +A PIL  YKLERHL+   +C  M  +  +P +
Sbjct: 18  STPPLNQLLNQITNTKLERGYFMLWKTLALPILRGYKLERHLSGTKICSPMFTVSTIPSI 77

Query: 108 E------------DEPQGLLLLNPEYDIWIAIDQLLVGWLYNSMTIKVASQLTRHDTTKG 165
           E                G    NP Y++W+  DQLL+GW YNSMT +VA QL  H++ K 
Sbjct: 78  ETGDFGSQASGGASSATGERTFNPLYEVWVTADQLLLGWPYNSMTPEVAVQLMGHESAKS 137

BLAST of ClCG01G011630 vs. NCBI nr
Match: XP_038882253.1 (uncharacterized protein LOC120073479 [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-19
Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 0

Query: 34  DADAYEVRSGTCPV--STLAFANLLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTR 93
           +A   E+++ T P+  ST     LLNQ+TS K++   F+LW+ ++ PIL  Y+LE HL+R
Sbjct: 3   NATIIELKATTEPLKFSTPPLNQLLNQITSIKLERGTFMLWKTLSLPILKGYRLEGHLSR 62

Query: 94  KDVCPEM-----SIILPPLEDEPQG---------LLLLNPEYDIWIAIDQLLVGWLYNSM 153
             VCP M     S +  P E + Q          +  LNP+Y+ W+  +QLL+GWLYNSM
Sbjct: 63  TKVCPLMFILSTSSVAKPGEVDSQASEGALSSTYMKSLNPQYEAWVTANQLLLGWLYNSM 122

Query: 154 TIKVASQLTRHDTTKGLWEA--LFYGLQA 165
           T +V  QL  + + K LW+A  L +G+Q+
Sbjct: 123 TREVVVQLMGYKSAKSLWDAIHLLFGVQS 151

BLAST of ClCG01G011630 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19
Identity = 54/118 (45.76%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 55  LLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMSIILPPLEDEPQGLL- 114
           LLNQ+TS KMD  NFLLWQN+A PIL SYKL  +LT    CP   ++        +G   
Sbjct: 30  LLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTPTNIEGSTS 89

Query: 115 -----LLNPEYDIWIAIDQLLVGWLYNSMTIKVASQLTRHDTTKGLWEAL--FYGLQA 165
                 LNP Y+ WI +D+LL+GWLYNSM   VA Q+    T++ LW A+   +G+Q+
Sbjct: 90  SQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQS 147

BLAST of ClCG01G011630 vs. NCBI nr
Match: XP_016901223.1 (PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 2.0e-16
Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 0

Query: 40  VRSGTCPVSTLAFANLLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMS 99
           V S T   S      LLNQ++S K+D  N+LLW+ +A PI+ SYK E +LT ++ CP   
Sbjct: 8   VESSTTNFSNPPLNQLLNQLSSVKLDRENYLLWKTLALPIMKSYKFEGYLTGENPCPPKF 67

Query: 100 IILPPLEDEPQ----------------GLLLLNPEYDIWIAIDQLLVGWLYNSMTIKVAS 159
           I     E + +                    +NP++D W+    LL+GW+YNSMT +VA 
Sbjct: 68  ITNQTAESQSEIDGTAEATDGASSRSIATKTVNPKFDQWLTSYLLLLGWIYNSMTTEVAF 127

BLAST of ClCG01G011630 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.8e-19
Identity = 54/118 (45.76%), Postives = 71/118 (60.17%), Query Frame = 0

Query: 55  LLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMSIILPPLEDEPQGLL- 114
           LLNQ+TS KMD  NFLLWQN+A PIL SYKL  +LT    CP   ++        +G   
Sbjct: 30  LLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPPTHLVPTDTPTNIEGSTS 89

Query: 115 -----LLNPEYDIWIAIDQLLVGWLYNSMTIKVASQLTRHDTTKGLWEAL--FYGLQA 165
                 LNP Y+ WI +D+LL+GWLYNSM   VA Q+    T++ LW A+   +G+Q+
Sbjct: 90  SQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAVQELFGVQS 147

BLAST of ClCG01G011630 vs. ExPASy TrEMBL
Match: A0A1S4DZ26 (uncharacterized protein LOC107991202 OS=Cucumis melo OX=3656 GN=LOC107991202 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.9e-17
Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 0

Query: 40  VRSGTCPVSTLAFANLLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMS 99
           V S T   S      LLNQ++S K+D  N+LLW+ +A PI+ SYK E +LT ++ CP   
Sbjct: 8   VESSTTNFSNPPLNQLLNQLSSVKLDRENYLLWKTLALPIMKSYKFEGYLTGENPCPPKF 67

Query: 100 IILPPLEDEPQ----------------GLLLLNPEYDIWIAIDQLLVGWLYNSMTIKVAS 159
           I     E + +                    +NP++D W+    LL+GW+YNSMT +VA 
Sbjct: 68  ITNQTAESQSEIDGTAEATDGASSRSIATKTVNPKFDQWLTSYLLLLGWIYNSMTTEVAF 127

BLAST of ClCG01G011630 vs. ExPASy TrEMBL
Match: A0A5C7I376 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010383 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-16
Identity = 53/143 (37.06%), Postives = 78/143 (54.55%), Query Frame = 0

Query: 14  TSIPNHSLMKSTIESAYVKKDADAYEVRSGTCPVSTLAFANLLNQVTSTKMDGNNFLLWQ 73
           TS+P  S       S+Y   D    +  S +   S  A  N L+Q  S K+D  NFLLW+
Sbjct: 13  TSLPIQSSSPYVQPSSYTTTD----QPSSQSSSKSLKALGNALSQYNSIKLDRYNFLLWK 72

Query: 74  NIAFPILWSYKLERHLTRKDVCPEMSIILPPLEDEPQGLLLLNPEYDIWIAIDQLLVGWL 133
           N+  P++  ++LE  +  K  CP   II   + D     +  NP+++ WI  DQLL+ WL
Sbjct: 73  NMVLPVIKGHRLEGFINGKTHCPP-KIIFETISDFTFVEVQQNPDFENWITHDQLLLRWL 132

Query: 134 YNSMTIKVASQLTRHDTTKGLWE 157
           YNSMT  +ASQ+  H+T++ LW+
Sbjct: 133 YNSMTADIASQIIGHETSQSLWK 150

BLAST of ClCG01G011630 vs. ExPASy TrEMBL
Match: A0A5C7GVK1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027676 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-16
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 0

Query: 21  LMKSTIESAYVKKDADAYEVRSGTCPVSTLAFANLLNQVTSTKMDGNNFLLWQNIAFPIL 80
           L  +T   + V+K+  + E + G          N L    S K++  N+LLW+N+  P++
Sbjct: 146 LETATSPESVVRKETSSSEKKVG----------NPLGSYCSVKLNHENYLLWKNLVLPVI 205

Query: 81  WSYKLERHLTRKDVCPEMSIILPPLEDEPQGLLLLNPEYDIWIAIDQLLVGWLYNSMTIK 140
              ++E ++T    CP    I+  LE E    L  NPEY+ WI  DQ+L+GWLYNSM   
Sbjct: 206 RGNRMEGYITGAKKCPP-EFIITDLEQEADETLEENPEYEDWIVHDQILLGWLYNSMEPD 265

Query: 141 VASQLTRHDTTKGLWEAL--FYGLQASS 167
           VAS++   +T+K LWE++   +GL+  S
Sbjct: 266 VASEVIGSETSKDLWESINTLFGLKTKS 282

BLAST of ClCG01G011630 vs. ExPASy TrEMBL
Match: A0A5D3BVJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00450 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 48/120 (40.00%), Postives = 68/120 (56.67%), Query Frame = 0

Query: 55  LLNQVTSTKMDGNNFLLWQNIAFPILWSYKLERHLTRKDVCPEMSIILPPLEDEPQ---- 114
           LLNQ++S K+D  N+LLW+ +A PI+ SYK E HLT ++ CP   I     E + +    
Sbjct: 23  LLNQLSSVKLDRGNYLLWKTLALPIMKSYKFEGHLTGENPCPPKFITNQIGESQSEIDGT 82

Query: 115 ------------GLLLLNPEYDIWIAIDQLLVGWLYNSMTIKVASQLTRHDTTKGLWEAL 159
                           +NP++D W+    LL+GW+YNSMT +VA QL   +T K LWEA+
Sbjct: 83  AEATDGASSRSTATKTVNPKFDQWLTSYLLLLGWIYNSMTAEVAFQLKGFNTAKDLWEAI 142

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031745012.13.1e-2043.75uncharacterized protein LOC116405217 [Cucumis sativus][more]
XP_038887015.14.4e-1940.60uncharacterized protein LOC120077182 [Benincasa hispida][more]
XP_038882253.14.4e-1939.60uncharacterized protein LOC120073479 [Benincasa hispida][more]
XP_022151683.19.8e-1945.76uncharacterized protein LOC111019598 [Momordica charantia][more]
XP_016901223.12.0e-1638.52PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DCW44.8e-1945.76uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A1S4DZ269.9e-1738.52uncharacterized protein LOC107991202 OS=Cucumis melo OX=3656 GN=LOC107991202 PE=... [more]
A0A5C7I3761.7e-1637.06Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010383 PE=4 SV=1[more]
A0A5C7GVK12.2e-1635.14Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027676 PE=4 SV=1[more]
A0A5D3BVJ11.4e-1540.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G011630.1ClCG01G011630.1mRNA